Prupe.3G056400_v2.0.a1

Protein CHUP1, chloroplastic-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0009965
Physical Location & Seq
Reverse (-)
3999350 .. 4003443
4094 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G056400.2

Sequence Viewer

Length: 1902 bp
ATGGTGCTGGGAAAGAACAGGGACATAAAGCCTCTTTTGTTGAAATTTGGGGTGGCTTTTGCTCTCTCTTTTGCTGGATTTCTCTTTTCTCGTCTCAAAATCAAAAGGACCAAGCCCTCCCTGCCTCCTCCACGCTCACCGCGCTCTTCGGATAAAGAAAGTGAAGTTGATCCAGGAGTAAGACATCGGCGAAAGGATGACCTTAATGTGACAAGGAAACCACACAGTTCATGCAATGCTTCAATTGCGTCAGAAAAATATGAAGAGACATACATCCCAAAGGTCTGTGCTGTTAATTGCACATCCAGCGTTTCTCCATGCAGTAAACATGGTGGAGGTAAAGATGGATTACTCTTGCCAGTGTTCAATGATCTTGTGAAGGAATTTGACTTTGCCGCTGCAAATTCTGGTTTTTCTCCAAGGATGAATGTTGAAACGCCTAGGTCAGATGTAGACACTCCGAAAGCGTTTAGAACTTCAGAAATGGAAGAACATGAACAAGAAATCAGACACCTCAGAAGCACAGTCAGAATGCTTCGAGAGAGGGAGCGGAGTCTTGAGGTCCAGTTGCTCGAGTATTATGGCCTGAAAGAGCAGGAGACTGCTGTTATGGAGCTCCAAAATCAGTTAAAGATAAACACCATGGAGGCTAAGCTTTTCACTCTCAAGATTGAGTCTTTAGAGGCAGAGAACCGAAGAGTGGAGGCACAAGTGGCTGATCATGCAAAAGTGGTGGGTGAGCTTGAGGCTACTAGGGCCAAAATCAAGATTCTGAAAAAGAAACTCAGATTCGAAGCTGAACAGAACAAAGAACAGATCTTAAATCTTAAGAAAAGAGTTGAGAAGTTTCACGATAGTGAAGCTGCTGATAATTCCGAGATTCAATTGAACCTGAGAAGGCTAAAAGATTTGGAGGGTGAAGCTGAAGAATTGAGAAAGTCTAATTTTCAATTGCAAATAGAAAATTCTGAATTGGCTCGGAGTTTGGAGTCCACACAAATCCTTGCAAATTCTATCCTGGAAGATCCAGAGGCAGAAGCATTGAAGGAAGCGAGCGCGCGTTTAAGACAAGAAAATGAAGATTTGACAAAGGAAATTCAGCAACTCCAAGTTGATCGATGTTCTGATGTTGAAGAATTAGTTTACCTCCGGTGGATAAATGCTTGCTTACGATATGAGCTGCGGAATTTTCAGCCCCCAACTGGTAAAACAGCGGCAAGGGACTTAAGTAAATCACTAAGCCCGAGATCGGAGGAGAAAGCCAAACAGCTAATAGTTGAATATGCAAACACTGAAGGGATGGGGGAGAAGGGGATGATGGTCGACTTTGATTCTGATCAATGGTCATCCTCCCATGCTTCCTTTTTTACAGACTCTCCGGAGTTTGATGATTTTTCTGTTGATAATTCATCGGCAACAAAAACCAACACCACCACTAAGAGCAAATTGTTCAACAAGCTAAGGAGACTCGTACTTGGTAAAGACATTCATTACGAAAACCGGGTTTTGTCAACAGATAGAACTGGATATGCAGAAGATAACGAGTCTCCATATTGCAGCTCAAGTAAATCAACAGCAGCTTATACTGGGCCTGAGGGTCAGAGTAACGTATTTGCAACTTCATCGCGTAGTTCATCTAGAGCTTCTTTAGATCTTCCCAGATGGAGGAGTCCAAAGCAGCAGGATACCAAGGATGTACAAAGTGTTCAAAGACATAGCGATGTGGGATCCTCCCCGGCGTATAAGACCTTCAGCAGGGAAGGTTCTGCAGATTTGCCCCTCAAATCTGATCAAGACTCAGATTCTACCGAGAAAGCTGAGTTGGTGAAATATGCCGAAGCTTTGATGAGCTCTCGTGGTGCAACGCCCAAGGTACACAGAAAATCAGCATCAGCATCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

634

Amino Acids

71.46

Weight (kDa)

6.88

Isoelectric Point (pI)

56.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0009965)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G52080 AT1G52080
fragaria_vesca FvH4_6g32630
malus_domestica MD09G1199900.v1.1
prunus_persica Prupe.3G056400_v2.0.a1 Prupe.3G056400_v2.0.a1
pyrus_communis pycom09g11710 pycom17g18980
rosa_chinensis RchiOBHm_Chr2g0141111
rosa_laevigata RLG00000019915
rosa_multiflora Rmu_sc0006556.1_g000011
rosa_roxburghii Rroxscaffold_2G00104200
rosa_rugosa Rorug02G0367200 Rorug02G0367300 Rorug02G0367400
rosa_samantha Rh2AG418200 Rh2BG428200 Rh2CG404600 Rh2DG438000
rosa_wichuraiana Rw0G019790 Rw2G034300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 550
AccI GTMKAC 2 cut(s) 453, 1323
AccII CGCG 4 cut(s) 142, 1058, 1060, 1627
AccIII TCCGGA 1 cut(s) 1378
AciI CCGC 5 cut(s) 140, 396, 550, 1183, 1214
AclWI GGATC 4 cut(s) 164, 1019, 1722, 1735
AcsI RAATTY 7 cut(s) 44, 383, 403, 964, 1009, 1095, 1186
AcuI CTGAAG 4 cut(s) 462, 945, 1314, 1735
AfaI GTAC 3 cut(s) 1473, 1698, 1875
AfiI CCNNNNNNNGG 5 cut(s) 700, 1202, 1249, 1665, 1755
AflII CTTAAG 2 cut(s) 827, 1225
AjnI CCWGG 2 cut(s) 172, 1017
AjuI GAANNNNNNNTTGG 2 cut(s) 1805, 1837
AleI CACNNNNGTG 1 cut(s) 855
Alw21I GWGCWC 2 cut(s) 618, 1853
Alw26I GTCTC 5 cut(s) 98, 260, 593, 1459, 1551
AlwI GGATC 4 cut(s) 164, 1019, 1722, 1735
Ama87I CYCGRG 2 cut(s) 572, 1243
Aor13HI TCCGGA 1 cut(s) 1378
AoxI GGCC 3 cut(s) 583, 756, 1589
ApeKI GCWGC 6 cut(s) 398, 863, 1180, 1557, 1577, 1678
ApoI RAATTY 7 cut(s) 44, 383, 403, 964, 1009, 1095, 1186
AspA2I CCTAGG 1 cut(s) 440
AspLEI GCGC 3 cut(s) 144, 1058, 1060
AspS9I GGNCC 4 cut(s) 108, 562, 756, 1589
AsuC2I CCSGG 2 cut(s) 1502, 1736
AsuHPI GGTGA 4 cut(s) 129, 749, 929, 1837
AsuII TTCGAA 1 cut(s) 792
AvaI CYCGRG 2 cut(s) 572, 1243
AvaII GGWCC 2 cut(s) 108, 562
AvrII CCTAGG 1 cut(s) 440
AxyI CCTNAGG 1 cut(s) 1593
BamHI GGATCC 1 cut(s) 1727
BanII GRGCYC 2 cut(s) 618, 1853
BarI GAAGNNNNNNTAC 2 cut(s) 1733, 1765
BauI CACGAG 1 cut(s) 1854
Bbv12I GWGCWC 2 cut(s) 618, 1853
BbvI GCAGC 6 cut(s) 385, 850, 1167, 1569, 1589, 1690
BccI CCATC 4 cut(s) 338, 1294, 1312, 1656
BcgI CGANNNNNNTGC 2 cut(s) 1605, 1639
BciT130I CCWGG 2 cut(s) 174, 1019
BciVI GTATCC 1 cut(s) 1678
BclI TGATCA 3 cut(s) 718, 1336, 1789
BcnI CCSGG 2 cut(s) 1502, 1736
BcoDI GTCTC 5 cut(s) 98, 260, 593, 1459, 1551
BfaI CTAG 3 cut(s) 441, 753, 1638
BfmI CTRYAG 1 cut(s) 1767
BfrI CTTAAG 2 cut(s) 827, 1225
BfuI GTATCC 1 cut(s) 1678
BglII AGATCT 2 cut(s) 816, 1651
BisI GCNGC 8 cut(s) 396, 399, 864, 1181, 1215, 1558, 1578, 1679
BlnI CCTAGG 1 cut(s) 440
BlpI GCTNAGC 1 cut(s) 651
BlsI GCNGC 8 cut(s) 397, 400, 865, 1182, 1216, 1559, 1579, 1680
Bme1390I CCNGG 4 cut(s) 174, 1019, 1502, 1736
Bme18I GGWCC 2 cut(s) 108, 562
BmeT110I CYCGRG 2 cut(s) 572, 1243
BmgT120I GGNCC 4 cut(s) 108, 562, 756, 1589
BmiI GGNNCC 1 cut(s) 1729
BmrFI CCNGG 4 cut(s) 174, 1019, 1502, 1736
BmrI ACTGGG 1 cut(s) 1596
BmsI GCATC 1 cut(s) 1898
BmuI ACTGGG 1 cut(s) 1596
Bpu10I CCTNAGC 1 cut(s) 1460
Bpu1102I GCTNAGC 1 cut(s) 651
Bpu14I TTCGAA 1 cut(s) 792
BpuEI CTTGAG 4 cut(s) 578, 650, 764, 1546
BpuMI CCSGG 2 cut(s) 1502, 1736
Bsa29I ATCGAT 1 cut(s) 1117
BsaBI GATNNNNATC 1 cut(s) 1335
BsaJI CCNNGG 6 cut(s) 419, 440, 642, 1689, 1734, 1869
BsaWI WCCGGW 2 cut(s) 1149, 1378
BsaXI ACNNNNNCTCC 2 cut(s) 1360, 1390
Bsc4I CCNNNNNNNGG 5 cut(s) 700, 1202, 1249, 1665, 1755
Bse1I ACTGG 5 cut(s) 359, 565, 1207, 1528, 1591
Bse21I CCTNAGG 1 cut(s) 1593
Bse3DI GCAATG 1 cut(s) 241
Bse8I GATNNNNATC 1 cut(s) 1335
BseAI TCCGGA 1 cut(s) 1378
BseBI CCWGG 2 cut(s) 174, 1019
BseCI ATCGAT 1 cut(s) 1117
BseDI CCNNGG 6 cut(s) 419, 440, 642, 1689, 1734, 1869
BseGI GGATG 8 cut(s) 202, 273, 302, 429, 1305, 1320, 1346, 1699
BseJI GATNNNNATC 1 cut(s) 1335
BseLI CCNNNNNNNGG 5 cut(s) 700, 1202, 1249, 1665, 1755
BseMI GCAATG 1 cut(s) 241
BseMII CTCAG 6 cut(s) 529, 799, 884, 1584, 1809, 1812
BseNI ACTGG 5 cut(s) 359, 565, 1207, 1528, 1591
BsePI GCGCGC 1 cut(s) 1056
BseRI GAGGAG 3 cut(s) 117, 1268, 1681
BseXI GCAGC 6 cut(s) 385, 850, 1167, 1569, 1589, 1690
BseYI CCCAGC 1 cut(s) 7
Bsh1236I CGCG 4 cut(s) 142, 1058, 1060, 1627
BshFI GGCC 3 cut(s) 585, 758, 1591
BshVI ATCGAT 1 cut(s) 1117
BsiHKAI GWGCWC 2 cut(s) 618, 1853
BsiHKCI CYCGRG 2 cut(s) 572, 1243
BsiSI CCGG 4 cut(s) 1150, 1379, 1501, 1736
BslFI GGGAC 2 cut(s) 35, 1235
BslI CCNNNNNNNGG 5 cut(s) 700, 1202, 1249, 1665, 1755
BsmAI GTCTC 5 cut(s) 98, 260, 593, 1459, 1551
BsmBI CGTCTC 1 cut(s) 98
BsmFI GGGAC 2 cut(s) 35, 1235
BsmI GAATGC 1 cut(s) 537
BsnI GGCC 3 cut(s) 585, 758, 1591
BsoBI CYCGRG 2 cut(s) 572, 1243
Bsp119I TTCGAA 1 cut(s) 792
Bsp1286I GDGCHC 2 cut(s) 618, 1853
Bsp13I TCCGGA 1 cut(s) 1378
Bsp1407I TGTACA 1 cut(s) 1696
Bsp1720I GCTNAGC 1 cut(s) 651
Bsp19I CCATGG 1 cut(s) 642
BspACI CCGC 5 cut(s) 140, 396, 550, 1183, 1214
BspANI GGCC 3 cut(s) 585, 758, 1591
BspCNI CTCAG 6 cut(s) 528, 798, 885, 1585, 1810, 1811
BspDI ATCGAT 1 cut(s) 1117
BspEI TCCGGA 1 cut(s) 1378
BspFNI CGCG 4 cut(s) 142, 1058, 1060, 1627
BspLI GGNNCC 1 cut(s) 1729
BspMAI CTGCAG 1 cut(s) 1771
BspPI GGATC 4 cut(s) 164, 1019, 1722, 1735
BspQI GCTCTTC 1 cut(s) 151
BspT104I TTCGAA 1 cut(s) 792
BspTI CTTAAG 2 cut(s) 827, 1225
BsrBI CCGCTC 1 cut(s) 550
BsrDI GCAATG 1 cut(s) 241
BsrGI TGTACA 1 cut(s) 1696
BsrI ACTGG 5 cut(s) 359, 565, 1207, 1528, 1591
BssECI CCNNGG 6 cut(s) 419, 440, 642, 1689, 1734, 1869
BssHII GCGCGC 1 cut(s) 1056
BssSI CACGAG 1 cut(s) 1854
BssT1I CCWWGG 5 cut(s) 419, 440, 642, 1689, 1869
Bst2BI CACGAG 1 cut(s) 1854
Bst2UI CCWGG 2 cut(s) 174, 1019
Bst4CI ACNGT 2 cut(s) 227, 526
Bst6I CTCTTC 3 cut(s) 151, 258, 691
BstAFI CTTAAG 2 cut(s) 827, 1225
BstAUI TGTACA 1 cut(s) 1696
BstBI TTCGAA 1 cut(s) 792
BstC8I GCNNGC 3 cut(s) 1054, 1058, 1165
BstDSI CCRYGG 1 cut(s) 642
BstENI CCTNNNNNAGG 1 cut(s) 1753
BstF5I GGATG 8 cut(s) 202, 273, 302, 429, 1305, 1320, 1346, 1699
BstFNI CGCG 4 cut(s) 142, 1058, 1060, 1627
BstHHI GCGC 3 cut(s) 144, 1058, 1060
BstMAI GTCTC 5 cut(s) 98, 260, 593, 1459, 1551
BstMWI GCNNNNNNNGC 7 cut(s) 121, 141, 245, 306, 713, 722, 755
BstNI CCWGG 2 cut(s) 174, 1019
BstSCI CCNGG 4 cut(s) 172, 1017, 1500, 1734
BstSFI CTRYAG 1 cut(s) 1767
BstUI CGCG 4 cut(s) 142, 1058, 1060, 1627
BstV1I GCAGC 6 cut(s) 385, 850, 1167, 1569, 1589, 1690
BstX2I RGATCY 4 cut(s) 816, 1024, 1651, 1727
BstYI RGATCY 4 cut(s) 816, 1024, 1651, 1727
Bsu15I ATCGAT 1 cut(s) 1117
Bsu36I CCTNAGG 1 cut(s) 1593
BsuI GTATCC 1 cut(s) 1678
BsuRI GGCC 3 cut(s) 585, 758, 1591
BsuTUI ATCGAT 1 cut(s) 1117
BtgI CCRYGG 1 cut(s) 642
BtgZI GCGATG 2 cut(s) 1608, 1734
BtsCI GGATG 8 cut(s) 202, 273, 302, 429, 1305, 1320, 1346, 1699
BtsIMutI CAGTG 2 cut(s) 366, 1290
Cac8I GCNNGC 3 cut(s) 1054, 1058, 1165
CfoI GCGC 3 cut(s) 144, 1058, 1060
Cfr13I GGNCC 4 cut(s) 108, 562, 756, 1589
ClaI ATCGAT 1 cut(s) 1117
CseI GACGC 1 cut(s) 237
Csp6I GTAC 3 cut(s) 1472, 1697, 1874
CspCI CAANNNNNGTGG 2 cut(s) 714, 749
CviAII CATG 7 cut(s) 231, 318, 329, 494, 643, 722, 1355
CviQI GTAC 3 cut(s) 1472, 1697, 1874
Eam1104I CTCTTC 3 cut(s) 151, 258, 691
EarI CTCTTC 3 cut(s) 151, 258, 691
Ecl136II GAGCTC 2 cut(s) 616, 1851
Eco130I CCWWGG 5 cut(s) 419, 440, 642, 1689, 1869
Eco24I GRGCYC 2 cut(s) 618, 1853
Eco47I GGWCC 2 cut(s) 108, 562
Eco53kI GAGCTC 2 cut(s) 616, 1851
Eco57I CTGAAG 4 cut(s) 462, 945, 1314, 1735
Eco81I CCTNAGG 1 cut(s) 1593
Eco88I CYCGRG 2 cut(s) 572, 1243
EcoICRI GAGCTC 2 cut(s) 616, 1851
EcoNI CCTNNNNNAGG 1 cut(s) 1753
EcoRII CCWGG 2 cut(s) 172, 1017
EcoT14I CCWWGG 5 cut(s) 419, 440, 642, 1689, 1869
EcoT38I GRGCYC 2 cut(s) 618, 1853
ErhI CCWWGG 5 cut(s) 419, 440, 642, 1689, 1869
Esp3I CGTCTC 1 cut(s) 98
FaeI CATG 7 cut(s) 234, 321, 332, 497, 646, 725, 1358
FaqI GGGAC 2 cut(s) 35, 1235
FatI CATG 7 cut(s) 230, 317, 328, 493, 642, 721, 1354
FbaI TGATCA 3 cut(s) 718, 1336, 1789
FblI GTMKAC 2 cut(s) 453, 1323
Fnu4HI GCNGC 8 cut(s) 396, 399, 864, 1181, 1215, 1558, 1578, 1679
FokI GGATG 8 cut(s) 209, 260, 289, 436, 1312, 1327, 1333, 1706
FriOI GRGCYC 2 cut(s) 618, 1853
Fsp4HI GCNGC 8 cut(s) 396, 399, 864, 1181, 1215, 1558, 1578, 1679
FspBI CTAG 3 cut(s) 441, 753, 1638
GlaI GCGC 3 cut(s) 143, 1057, 1059
GluI GCNGC 8 cut(s) 396, 399, 864, 1181, 1215, 1558, 1578, 1679
GsaI CCCAGC 1 cut(s) 11
HaeIII GGCC 3 cut(s) 585, 758, 1591
HapII CCGG 4 cut(s) 1150, 1379, 1501, 1736
HgaI GACGC 1 cut(s) 237
HhaI GCGC 3 cut(s) 144, 1058, 1060
Hin1II CATG 7 cut(s) 234, 321, 332, 497, 646, 725, 1358
Hin6I GCGC 3 cut(s) 142, 1056, 1058
HinP1I GCGC 3 cut(s) 142, 1056, 1058
HincII GTYRAC 2 cut(s) 1324, 1512
HindII GTYRAC 2 cut(s) 1324, 1512
HindIII AAGCTT 2 cut(s) 653, 1839
HpaII CCGG 4 cut(s) 1150, 1379, 1501, 1736
HphI GGTGA 4 cut(s) 129, 749, 929, 1837
Hpy166II GTNNAC 7 cut(s) 326, 454, 993, 1144, 1324, 1512, 1876
Hpy188III TCNNGA 9 cut(s) 539, 557, 667, 766, 851, 1028, 1379, 1638, 1793
Hpy8I GTNNAC 7 cut(s) 326, 454, 993, 1144, 1324, 1512, 1876
HpyAV CCTTC 7 cut(s) 373, 891, 1039, 1289, 1303, 1754, 1759
HpyCH4III ACNGT 2 cut(s) 227, 526
HpyCH4IV ACGT 1 cut(s) 1608
HpyF10VI GCNNNNNNNGC 7 cut(s) 121, 141, 245, 306, 713, 722, 755
HpySE526I ACGT 1 cut(s) 1608
Hsp92II CATG 7 cut(s) 234, 321, 332, 497, 646, 725, 1358
HspAI GCGC 3 cut(s) 142, 1056, 1058
Kpn2I TCCGGA 1 cut(s) 1378
Ksp22I TGATCA 3 cut(s) 718, 1336, 1789
LguI GCTCTTC 1 cut(s) 151
LmnI GCTCC 3 cut(s) 547, 613, 621
Lsp1109I GCAGC 6 cut(s) 385, 850, 1167, 1569, 1589, 1690
LweI GCATC 1 cut(s) 1898
MaeI CTAG 3 cut(s) 441, 753, 1638
MaeII ACGT 1 cut(s) 1608
MaeIII GTNAC 2 cut(s) 208, 1604
MbiI CCGCTC 1 cut(s) 550
MfeI CAATTG 3 cut(s) 243, 884, 950
MflI RGATCY 4 cut(s) 816, 1024, 1651, 1727
MhlI GDGCHC 2 cut(s) 618, 1853
MlyI GAGTC 8 cut(s) 562, 683, 998, 1367, 1461, 1553, 1678, 1790
MroI TCCGGA 1 cut(s) 1378
MseI TTAA 7 cut(s) 204, 294, 629, 821, 828, 1064, 1226
MslI CAYNNNNRTG 2 cut(s) 855, 1719
MspA1I CMGCKG 2 cut(s) 398, 1214
MspCI CTTAAG 2 cut(s) 827, 1225
MspI CCGG 4 cut(s) 1150, 1379, 1501, 1736
MspR9I CCNGG 4 cut(s) 174, 1019, 1502, 1736
MunI CAATTG 3 cut(s) 243, 884, 950
Mva1269I GAATGC 1 cut(s) 537
MvaI CCWGG 2 cut(s) 174, 1019
MvnI CGCG 4 cut(s) 142, 1058, 1060, 1627
MwoI GCNNNNNNNGC 7 cut(s) 121, 141, 245, 306, 713, 722, 755
NciI CCSGG 2 cut(s) 1502, 1736
NcoI CCATGG 1 cut(s) 642
NlaIII CATG 7 cut(s) 234, 321, 332, 497, 646, 725, 1358
NlaIV GGNNCC 1 cut(s) 1729
NmuCI GTSAC 1 cut(s) 208
NspV TTCGAA 1 cut(s) 792
OliI CACNNNNGTG 1 cut(s) 855
PaeR7I CTCGAG 1 cut(s) 572
PauI GCGCGC 1 cut(s) 1056
PciSI GCTCTTC 1 cut(s) 151
PctI GAATGC 1 cut(s) 537
PfeI GAWTC 5 cut(s) 769, 789, 880, 1331, 1802
PfoI TCCNGGA 2 cut(s) 172, 1017
PkrI GCNGC 8 cut(s) 397, 400, 865, 1182, 1216, 1559, 1579, 1680
PleI GAGTC 8 cut(s) 561, 682, 997, 1367, 1461, 1552, 1677, 1790
PpsI GAGTC 8 cut(s) 561, 682, 997, 1367, 1461, 1552, 1677, 1790
Psp124BI GAGCTC 2 cut(s) 618, 1853
Psp6I CCWGG 2 cut(s) 172, 1017
PspFI CCCAGC 1 cut(s) 7
PspGI CCWGG 2 cut(s) 172, 1017
PspN4I GGNNCC 1 cut(s) 1729
PspPI GGNCC 4 cut(s) 108, 562, 756, 1589
PspXI VCTCGAGB 1 cut(s) 572
PsrI GAACNNNNNNTAC 2 cut(s) 1689, 1721
PstI CTGCAG 1 cut(s) 1771
PsuI RGATCY 4 cut(s) 816, 1024, 1651, 1727
PteI GCGCGC 1 cut(s) 1056
RsaI GTAC 3 cut(s) 1473, 1698, 1875
RsaNI GTAC 3 cut(s) 1472, 1697, 1874
RseI CAYNNNNRTG 2 cut(s) 855, 1719
SacI GAGCTC 2 cut(s) 618, 1853
SalI GTCGAC 1 cut(s) 1322
SapI GCTCTTC 1 cut(s) 151
SaqAI TTAA 7 cut(s) 204, 294, 629, 821, 828, 1064, 1226
SatI GCNGC 8 cut(s) 396, 399, 864, 1181, 1215, 1558, 1578, 1679
Sau96I GGNCC 4 cut(s) 108, 562, 756, 1589
SchI GAGTC 8 cut(s) 562, 683, 998, 1367, 1461, 1553, 1678, 1790
ScrFI CCNGG 4 cut(s) 174, 1019, 1502, 1736
SduI GDGCHC 2 cut(s) 618, 1853
SfaNI GCATC 1 cut(s) 1898
SfcI CTRYAG 1 cut(s) 1767
Sfr274I CTCGAG 1 cut(s) 572
SfuI TTCGAA 1 cut(s) 792
SinI GGWCC 2 cut(s) 108, 562
SlaI CTCGAG 1 cut(s) 572
SmiMI CAYNNNNRTG 2 cut(s) 855, 1719
SmlI CTYRAG 7 cut(s) 557, 572, 665, 743, 827, 1225, 1561
SmoI CTYRAG 7 cut(s) 557, 572, 665, 743, 827, 1225, 1561
SsiI CCGC 5 cut(s) 140, 396, 550, 1183, 1214
SspMI CTAG 3 cut(s) 441, 753, 1638
SstI GAGCTC 2 cut(s) 618, 1853
StyD4I CCNGG 4 cut(s) 172, 1017, 1500, 1734
StyI CCWWGG 5 cut(s) 419, 440, 642, 1689, 1869
TaaI ACNGT 2 cut(s) 227, 526
TaiI ACGT 1 cut(s) 1611
TaqI TCGA 5 cut(s) 538, 573, 792, 1117, 1323
TatI WGTACW 1 cut(s) 1696
TauI GCSGC 2 cut(s) 398, 1217
TfiI GAWTC 5 cut(s) 769, 789, 880, 1331, 1802
Tru1I TTAA 7 cut(s) 204, 294, 629, 821, 828, 1064, 1226
Tru9I TTAA 7 cut(s) 204, 294, 629, 821, 828, 1064, 1226
TscAI CASTG 2 cut(s) 366, 1297
TseFI GTSAC 1 cut(s) 208
TseI GCWGC 6 cut(s) 398, 863, 1180, 1557, 1577, 1678
Tsp45I GTSAC 1 cut(s) 208
TspDTI ATGAA 9 cut(s) 219, 276, 440, 510, 1092, 1398, 1478, 1611, 1623
TspRI CASTG 2 cut(s) 366, 1297
Vha464I CTTAAG 2 cut(s) 827, 1225
VpaK11BI GGWCC 2 cut(s) 108, 562
XagI CCTNNNNNAGG 1 cut(s) 1753
XapI RAATTY 7 cut(s) 44, 383, 403, 964, 1009, 1095, 1186
XbaI TCTAGA 1 cut(s) 1637
XhoI CTCGAG 1 cut(s) 572
XmaJI CCTAGG 1 cut(s) 440
XmiI GTMKAC 2 cut(s) 453, 1323
XspI CTAG 3 cut(s) 441, 753, 1638
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.