MD10G1001400.v1.1

Belongs to the glycosyltransferase 31 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
261393 .. 263763
2371 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1001400.v1.1.491

Sequence Viewer

Length: 1380 bp
ATGAATATGGTCTTCATATATAGGGCCCTAACCAAAAACAGATTAGTGCTCTCAGGGAAGAATCTGGTCGCGGGATTGGGACGTGTGAAAATCTGTGGAGGGAAGCTGTGGCAGCTTGGAAACAGCCATTACTCACGGAGGAAGATCATGAGGGGAAAGCAGGTTTCAGGAAGAGTGCTGTTGGTGCTATGTGTTGCAAGTTTTCTTGCAGGATCACTGTTTTGTACCAGCCGCATGACATGGACGACTCAACTGCATTCTCCAAATAAAGAAGCTGATCATCAGTTTCCCATCATTTCCAGCCGCATAAAGAAGCTAGAGGCCTCATCATCAGTCGCACAAGATAAAGATTGCGATCACAAGCGGAAATTGGTTGAAGGAAAATCCGAGGATGATATTACGGCGGAGATGACAAAAACCCATCAAGCTATCCAATCGTTGGATAAAACAATTTCAAAGCTGGAAATGGAAATAGCAGCAGCAAGAGCAAGCCAGAGATTAGAGGCACAACTCAAGTTAGACGACGGAGCATCAAATAATAATCCCACTACTCATCCTAAACAAAAAGCTTTCGTATTCATTGGAATCAACACAGCTTTCAGCAGCCAAAAACGACGAAAAACAGTTCGAGAAACCTGGATGCCTAGAGGAGAGAAGCTAAAGAAGTTGGAGAAGGAGAAAGGGATTGTAATAAGGTTTGTGATAGGGCAGAGCGCAATGCCGGGAGGCATGCTTGATAGGGCGATCGAGGCAGAAGAGGCAAAGCACAACGACTTCCTTCGGCTCAACCATGCGGAGGGCTACCATGAACTCTCCACCAAGACCCGCCTGTATTTCTCCACCGCCATCTCCATTTGGGATGCTGAGTTTTATGTCAAGGTCGACGATGATATCCATGTCAATCTTGGTATGCTAGCGACCACACTTGCAAGGCACCGCTCCAAACCCAGAATTTATATTGGTTGCATGAAGTCAGGCCCAGTTCTCTTCCAAAAAGGGGTGAAATATCACGAGCCAGAGTATTGGAAATTCGGAGAAGAAGGAAACAAGTACTTCAGACATGCGACTGGCCAAATCTATGCCATCTCAAAGGACCTGGCTACCTACATCTCCAACAATTTGCCAATATTACATAGGTATGCAAACGAGGATGTATCATTGGGTTCGTGGTTCATTGGGCTTGAAGTCGAGCACATCGACGACCGCTCCATGTGTTGCGGGACCTCTCCAGATTGCGAAAGGAGGGCACAAGCAGGGAATGTATGCGTGGCATCATTTGATTGGAAGTGTAGTGGAATATGCAACTCCGCGGAGAGGATGAAAGACGTGCATAACTTGTGCGGAGAAGAAAGTGGTGCTGTTTGGAACGTTGAACTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

460

Amino Acids

51.75

Weight (kDa)

9.19

Isoelectric Point (pI)

35.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4094 PF13334 57 - 164 1.1e-20 Domain of unknown function (DUF4094)
Galactosyl_T PF01762 204 - 401 1.1e-46 Galactosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 151
AccB1I GGYRCC 1 cut(s) 933
AccB7I CCANNNNNTGG 1 cut(s) 439
AccBSI CCGCTC 2 cut(s) 939, 1206
AccI GTMKAC 1 cut(s) 882
AccII CGCG 2 cut(s) 71, 1310
AclI AACGTT 1 cut(s) 1368
AclWI GGATC 1 cut(s) 220
AcoI YGGCCR 1 cut(s) 1069
AcsI RAATTY 2 cut(s) 951, 1028
AcuI CTGAAG 1 cut(s) 1039
AfaI GTAC 2 cut(s) 226, 1052
AfiI CCNNNNNNNGG 4 cut(s) 439, 796, 997, 1314
AflIII ACRYGT 1 cut(s) 82
AgsI TTSAA 4 cut(s) 377, 456, 1184, 1373
AjiI CACGTC 2 cut(s) 83, 1327
AjnI CCWGG 2 cut(s) 635, 1095
AluBI AGCT 9 cut(s) 106, 115, 275, 316, 428, 460, 569, 596, 658
AluI AGCT 9 cut(s) 106, 115, 275, 316, 428, 460, 569, 596, 658
Alw21I GWGCWC 2 cut(s) 51, 1194
AlwI GGATC 1 cut(s) 220
AoxI GGCC 4 cut(s) 24, 321, 976, 1069
ApaI GGGCCC 1 cut(s) 28
ApeKI GCWGC 4 cut(s) 112, 476, 479, 603
ApoI RAATTY 2 cut(s) 951, 1028
AspLEI GCGC 1 cut(s) 716
AspS9I GGNCC 5 cut(s) 24, 25, 977, 1093, 1221
AsuC2I CCSGG 1 cut(s) 723
AsuHPI GGTGA 1 cut(s) 1012
AsuNHI GCTAGC 1 cut(s) 913
AvaII GGWCC 2 cut(s) 1093, 1221
BaeGI GKGCMC 2 cut(s) 28, 1249
BalI TGGCCA 1 cut(s) 1071
BanI GGYRCC 1 cut(s) 933
BanII GRGCYC 1 cut(s) 28
BauI CACGAG 1 cut(s) 1010
BbsI GAAGAC 1 cut(s) 4
Bbv12I GWGCWC 2 cut(s) 51, 1194
BbvI GCAGC 4 cut(s) 124, 488, 491, 615
BccI CCATC 4 cut(s) 299, 429, 854, 1091
BceAI ACGGC 1 cut(s) 417
BcgI CGANNNNNNTGC 2 cut(s) 235, 269
BciT130I CCWGG 2 cut(s) 637, 1097
BclI TGATCA 1 cut(s) 277
BcnI CCSGG 1 cut(s) 723
BfaI CTAG 3 cut(s) 317, 645, 914
BfuAI ACCTGC 1 cut(s) 151
BisI GCNGC 6 cut(s) 113, 232, 304, 477, 480, 604
BlsI GCNGC 6 cut(s) 114, 233, 305, 478, 481, 605
BmcAI AGTACT 1 cut(s) 1052
Bme1390I CCNGG 3 cut(s) 637, 723, 1097
Bme18I GGWCC 2 cut(s) 1093, 1221
BmgBI CACGTC 2 cut(s) 83, 1327
BmgT120I GGNCC 5 cut(s) 24, 25, 977, 1093, 1221
BmiI GGNNCC 3 cut(s) 26, 935, 1222
BmrFI CCNGG 3 cut(s) 637, 723, 1097
BmrI ACTGGG 1 cut(s) 974
BmsI GCATC 4 cut(s) 539, 630, 850, 1280
BmtI GCTAGC 1 cut(s) 917
BmuI ACTGGG 1 cut(s) 974
BpiI GAAGAC 1 cut(s) 4
BpmI CTGGAG 1 cut(s) 1212
BpuEI CTTGAG 1 cut(s) 497
BpuMI CCSGG 1 cut(s) 723
BsaBI GATNNNNATC 1 cut(s) 354
BsaJI CCNNGG 2 cut(s) 387, 1308
BsaXI ACNNNNNCTCC 2 cut(s) 1190, 1220
Bsc4I CCNNNNNNNGG 4 cut(s) 439, 796, 997, 1314
Bse1I ACTGG 2 cut(s) 980, 1072
Bse3DI GCAATG 1 cut(s) 723
Bse8I GATNNNNATC 1 cut(s) 354
BseBI CCWGG 2 cut(s) 637, 1097
BseDI CCNNGG 2 cut(s) 387, 1308
BseGI GGATG 6 cut(s) 397, 553, 645, 865, 1156, 1323
BseJI GATNNNNATC 1 cut(s) 354
BseLI CCNNNNNNNGG 4 cut(s) 439, 796, 997, 1314
BseMI GCAATG 1 cut(s) 723
BseMII CTCAG 2 cut(s) 66, 855
BseNI ACTGG 2 cut(s) 980, 1072
BseRI GAGGAG 1 cut(s) 663
BseSI GKGCMC 2 cut(s) 28, 1249
BseXI GCAGC 4 cut(s) 124, 488, 491, 615
Bsh1236I CGCG 2 cut(s) 71, 1310
Bsh1285I CGRYCG 2 cut(s) 747, 1204
BshFI GGCC 4 cut(s) 26, 323, 978, 1071
BshNI GGYRCC 1 cut(s) 933
BsiEI CGRYCG 2 cut(s) 747, 1204
BsiHKAI GWGCWC 2 cut(s) 51, 1194
BsiSI CCGG 1 cut(s) 722
BslFI GGGAC 2 cut(s) 93, 1234
BslI CCNNNNNNNGG 4 cut(s) 439, 796, 997, 1314
BsmFI GGGAC 2 cut(s) 93, 1234
BsmI GAATGC 1 cut(s) 256
BsnI GGCC 4 cut(s) 26, 323, 978, 1071
Bsp120I GGGCCC 1 cut(s) 24
Bsp1286I GDGCHC 4 cut(s) 28, 51, 1194, 1249
Bsp143I GATC 5 cut(s) 144, 212, 277, 355, 744
BspANI GGCC 4 cut(s) 26, 323, 978, 1071
BspCNI CTCAG 2 cut(s) 65, 856
BspFNI CGCG 2 cut(s) 71, 1310
BspHI TCATGA 1 cut(s) 147
BspLI GGNNCC 3 cut(s) 26, 935, 1222
BspMI ACCTGC 1 cut(s) 151
BspOI GCTAGC 1 cut(s) 917
BspPI GGATC 1 cut(s) 220
BspT107I GGYRCC 1 cut(s) 933
BsrBI CCGCTC 2 cut(s) 939, 1206
BsrDI GCAATG 1 cut(s) 723
BsrI ACTGG 2 cut(s) 980, 1072
BssECI CCNNGG 2 cut(s) 387, 1308
BssMI GATC 5 cut(s) 144, 212, 277, 355, 744
BssSI CACGAG 1 cut(s) 1010
Bst2BI CACGAG 1 cut(s) 1010
Bst2UI CCWGG 2 cut(s) 637, 1097
Bst4CI ACNGT 2 cut(s) 219, 625
Bst6I CTCTTC 3 cut(s) 166, 750, 992
BstC8I GCNNGC 3 cut(s) 490, 731, 915
BstDEI CTNAG 2 cut(s) 52, 864
BstDSI CCRYGG 1 cut(s) 1308
BstF5I GGATG 6 cut(s) 397, 553, 645, 865, 1156, 1323
BstFNI CGCG 2 cut(s) 71, 1310
BstHHI GCGC 1 cut(s) 716
BstKTI GATC 5 cut(s) 147, 215, 280, 358, 747
BstMBI GATC 5 cut(s) 144, 212, 277, 355, 744
BstMCI CGRYCG 2 cut(s) 747, 1204
BstMWI GCNNNNNNNGC 5 cut(s) 112, 184, 485, 749, 758
BstNI CCWGG 2 cut(s) 637, 1097
BstNSI RCATGY 2 cut(s) 733, 1064
BstSCI CCNGG 3 cut(s) 635, 721, 1095
BstSLI GKGCMC 2 cut(s) 28, 1249
BstUI CGCG 2 cut(s) 71, 1310
BstV1I GCAGC 4 cut(s) 124, 488, 491, 615
BstV2I GAAGAC 1 cut(s) 4
BstXI CCANNNNNNTGG 1 cut(s) 1023
BsuRI GGCC 4 cut(s) 26, 323, 978, 1071
BtgI CCRYGG 1 cut(s) 1308
BtrI CACGTC 2 cut(s) 83, 1327
BtsCI GGATG 6 cut(s) 397, 553, 645, 865, 1156, 1323
BtsIMutI CAGTG 1 cut(s) 215
BveI ACCTGC 1 cut(s) 151
Cac8I GCNNGC 3 cut(s) 490, 731, 915
CciI TCATGA 1 cut(s) 147
CfoI GCGC 1 cut(s) 716
Cfr13I GGNCC 5 cut(s) 24, 25, 977, 1093, 1221
Cfr42I CCGCGG 1 cut(s) 1311
Csp6I GTAC 2 cut(s) 225, 1051
CviQI GTAC 2 cut(s) 225, 1051
DdeI CTNAG 2 cut(s) 52, 864
DpnI GATC 5 cut(s) 146, 214, 279, 357, 746
DpnII GATC 5 cut(s) 144, 212, 277, 355, 744
EaeI YGGCCR 1 cut(s) 1069
Eam1104I CTCTTC 3 cut(s) 166, 750, 992
EarI CTCTTC 3 cut(s) 166, 750, 992
EciI GGCGGA 1 cut(s) 419
Eco147I AGGCCT 1 cut(s) 323
Eco24I GRGCYC 1 cut(s) 28
Eco32I GATATC 1 cut(s) 892
Eco47I GGWCC 2 cut(s) 1093, 1221
Eco57I CTGAAG 1 cut(s) 1039
EcoO109I RGGNCCY 4 cut(s) 24, 25, 1093, 1221
EcoRII CCWGG 2 cut(s) 635, 1095
EcoRV GATATC 1 cut(s) 892
EcoT38I GRGCYC 1 cut(s) 28
FaqI GGGAC 2 cut(s) 93, 1234
FauI CCCGC 3 cut(s) 64, 833, 1211
FbaI TGATCA 1 cut(s) 277
FblI GTMKAC 1 cut(s) 882
Fnu4HI GCNGC 6 cut(s) 113, 232, 304, 477, 480, 604
FokI GGATG 6 cut(s) 404, 540, 652, 872, 1163, 1330
FriOI GRGCYC 1 cut(s) 28
Fsp4HI GCNGC 6 cut(s) 113, 232, 304, 477, 480, 604
FspBI CTAG 3 cut(s) 317, 645, 914
GlaI GCGC 1 cut(s) 715
GluI GCNGC 6 cut(s) 113, 232, 304, 477, 480, 604
GsuI CTGGAG 1 cut(s) 1212
HaeIII GGCC 4 cut(s) 26, 323, 978, 1071
HapII CCGG 1 cut(s) 722
HhaI GCGC 1 cut(s) 716
Hin6I GCGC 1 cut(s) 714
HinP1I GCGC 1 cut(s) 714
HincII GTYRAC 1 cut(s) 883
HindII GTYRAC 1 cut(s) 883
HindIII AAGCTT 1 cut(s) 567
HinfI GANTC 3 cut(s) 61, 247, 585
HpaII CCGG 1 cut(s) 722
HphI GGTGA 1 cut(s) 1012
Hpy166II GTNNAC 1 cut(s) 883
Hpy188I TCNGA 3 cut(s) 388, 1034, 1058
Hpy188III TCNNGA 5 cut(s) 148, 168, 629, 1010, 1229
Hpy8I GTNNAC 1 cut(s) 883
Hpy99I CGWCG 4 cut(s) 527, 618, 887, 1202
HpyAV CCTTC 4 cut(s) 371, 667, 788, 1034
HpyCH4III ACNGT 2 cut(s) 219, 625
HpyCH4IV ACGT 3 cut(s) 82, 1326, 1368
HpyCH4V TGCA 8 cut(s) 197, 209, 256, 929, 966, 1142, 1302, 1330
HpyF10VI GCNNNNNNNGC 5 cut(s) 112, 184, 485, 749, 758
HpyF3I CTNAG 2 cut(s) 52, 864
HpySE526I ACGT 3 cut(s) 82, 1326, 1368
HspAI GCGC 1 cut(s) 714
Ksp22I TGATCA 1 cut(s) 277
KspI CCGCGG 1 cut(s) 1311
Kzo9I GATC 5 cut(s) 144, 212, 277, 355, 744
LmnI GCTCC 3 cut(s) 527, 944, 1211
Lsp1109I GCAGC 4 cut(s) 124, 488, 491, 615
LweI GCATC 4 cut(s) 539, 630, 850, 1280
MaeI CTAG 3 cut(s) 317, 645, 914
MaeII ACGT 3 cut(s) 82, 1326, 1368
MalI GATC 5 cut(s) 146, 214, 279, 357, 746
MbiI CCGCTC 2 cut(s) 939, 1206
MboI GATC 5 cut(s) 144, 212, 277, 355, 744
MboII GAAGA 8 cut(s) 4, 70, 154, 183, 767, 979, 1049, 1358
MhlI GDGCHC 4 cut(s) 28, 51, 1194, 1249
MlsI TGGCCA 1 cut(s) 1071
MluCI AATT 5 cut(s) 368, 450, 951, 1028, 1117
MluNI TGGCCA 1 cut(s) 1071
MlyI GAGTC 1 cut(s) 241
MmeI TCCRAC 3 cut(s) 420, 648, 1137
Mox20I TGGCCA 1 cut(s) 1071
MscI TGGCCA 1 cut(s) 1071
MseI TTAA 1 cut(s) 1378
MslI CAYNNNNRTG 1 cut(s) 1137
Msp20I TGGCCA 1 cut(s) 1071
MspA1I CMGCKG 1 cut(s) 1310
MspI CCGG 1 cut(s) 722
MspR9I CCNGG 3 cut(s) 637, 723, 1097
Mva1269I GAATGC 1 cut(s) 256
MvaI CCWGG 2 cut(s) 637, 1097
MvnI CGCG 2 cut(s) 71, 1310
MwoI GCNNNNNNNGC 5 cut(s) 112, 184, 485, 749, 758
NciI CCSGG 1 cut(s) 723
NdeII GATC 5 cut(s) 144, 212, 277, 355, 744
NheI GCTAGC 1 cut(s) 913
NlaIV GGNNCC 3 cut(s) 26, 935, 1222
NspI RCATGY 2 cut(s) 733, 1064
PaeI GCATGC 1 cut(s) 733
PagI TCATGA 1 cut(s) 147
PceI AGGCCT 1 cut(s) 323
PcsI WCGNNNNNNNCGW 1 cut(s) 1194
PctI GAATGC 1 cut(s) 256
PfeI GAWTC 2 cut(s) 61, 585
PflMI CCANNNNNTGG 1 cut(s) 439
PkrI GCNGC 6 cut(s) 114, 233, 305, 478, 481, 605
Ple19I CGATCG 1 cut(s) 747
PleI GAGTC 1 cut(s) 241
PpsI GAGTC 1 cut(s) 241
PpuMI RGGWCCY 2 cut(s) 1093, 1221
Psp1406I AACGTT 1 cut(s) 1368
Psp5II RGGWCCY 2 cut(s) 1093, 1221
Psp6I CCWGG 2 cut(s) 635, 1095
PspGI CCWGG 2 cut(s) 635, 1095
PspN4I GGNNCC 3 cut(s) 26, 935, 1222
PspOMI GGGCCC 1 cut(s) 24
PspPI GGNCC 5 cut(s) 24, 25, 977, 1093, 1221
PspPPI RGGWCCY 2 cut(s) 1093, 1221
PvuI CGATCG 1 cut(s) 747
RsaI GTAC 2 cut(s) 226, 1052
RsaNI GTAC 2 cut(s) 225, 1051
RseI CAYNNNNRTG 1 cut(s) 1137
SacII CCGCGG 1 cut(s) 1311
SalI GTCGAC 1 cut(s) 881
SaqAI TTAA 1 cut(s) 1378
SatI GCNGC 6 cut(s) 113, 232, 304, 477, 480, 604
Sau3AI GATC 5 cut(s) 144, 212, 277, 355, 744
Sau96I GGNCC 5 cut(s) 24, 25, 977, 1093, 1221
ScaI AGTACT 1 cut(s) 1052
SchI GAGTC 1 cut(s) 241
ScrFI CCNGG 3 cut(s) 637, 723, 1097
SduI GDGCHC 4 cut(s) 28, 51, 1194, 1249
SfaNI GCATC 4 cut(s) 539, 630, 850, 1280
Sfr303I CCGCGG 1 cut(s) 1311
SgrBI CCGCGG 1 cut(s) 1311
SinI GGWCC 2 cut(s) 1093, 1221
SmiMI CAYNNNNRTG 1 cut(s) 1137
SmlI CTYRAG 1 cut(s) 512
SmoI CTYRAG 1 cut(s) 512
SphI GCATGC 1 cut(s) 733
Sse9I AATT 5 cut(s) 368, 450, 951, 1028, 1117
SseBI AGGCCT 1 cut(s) 323
SspI AATATT 1 cut(s) 1128
SspMI CTAG 3 cut(s) 317, 645, 914
StuI AGGCCT 1 cut(s) 323
StyD4I CCNGG 3 cut(s) 635, 721, 1095
TaaI ACNGT 2 cut(s) 219, 625
TaiI ACGT 3 cut(s) 85, 1329, 1371
TaqI TCGA 5 cut(s) 628, 747, 882, 1188, 1197
TasI AATT 5 cut(s) 368, 450, 951, 1028, 1117
TatI WGTACW 1 cut(s) 1050
TauI GCSGC 2 cut(s) 234, 306
TfiI GAWTC 2 cut(s) 61, 585
Tru1I TTAA 1 cut(s) 1378
Tru9I TTAA 1 cut(s) 1378
TscAI CASTG 1 cut(s) 222
TseI GCWGC 4 cut(s) 112, 476, 479, 603
TspDTI ATGAA 7 cut(s) 4, 17, 568, 822, 983, 1162, 1334
TspGWI ACGGA 2 cut(s) 151, 540
TspRI CASTG 1 cut(s) 222
Van91I CCANNNNNTGG 1 cut(s) 439
VpaK11BI GGWCC 2 cut(s) 1093, 1221
XapI RAATTY 2 cut(s) 951, 1028
XceI RCATGY 2 cut(s) 733, 1064
XcmI CCANNNNNNNNNTGG 1 cut(s) 902
XmiI GTMKAC 1 cut(s) 882
XspI CTAG 3 cut(s) 317, 645, 914
ZrmI AGTACT 1 cut(s) 1052
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.