Rorug05G0493100

Belongs to the glycosyltransferase 31 family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
67558742 .. 67591594
32853 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0493100.1

Sequence Viewer

Length: 1758 bp
ATGGGAGAAGATGATGTGTACACAAAAGATGGGAGGGTTGTGCCCATTGCAGAATATGAGGAAGTCACCAAAGATGGGACAGTGGATTACAAAGGAAACCCAGCTAATAAAAAAGTCACAGGAACCTGGAAAGCCTGCCCTTTTATCCTGGGGACTGAATGCTGTGAAAGATTGGCATACTATGGGATGAGCTCAAATCTCATCACTTATTTCAAGGGACATCTGCACCAAAGCAGTGCTAAAGCAGCTAAGAGCAACTCAAATTGGAGTGGAACATGTTATCTCACTCCCTTACTTGGAGCATTTTTGGCTGATGCCTATTTGGGAAGATATAAGACTATTGCCTTTTTCTCAATCATCTATGTCATTGGGATGACTCTTTTGACATTGTCAGCATCAATCCCAGGCATGAAGCCAACCTGTGTTTCAAAAGATGATTGCTATGCAAACAGTGGACAAACTGCAGCATGCTTCATAGCTCTTTACCTTATAGCATTGGGAACTGGTGGAATTAAGCCTTGTGTCTCATCCTATGGAGCAGACCAGTTTGATGATGATGATGAGGTTGAGAAGAAGCACAAAGGTTCTTTCTTCAACTGGTTCTATTTTTCCATCAATGTCGGTGCTTTGATTGCGAGTTCTGTGCTGGTGTGGGTTCAAATGAACGAAGGTTGGTCATGGGGTTTTGGCATACCAGCAGCTGCCATGGCAATTGCTGTAGTGAGTTTCTTTTCGGGTACTCGGTTATATAGGAATCAGAAGCCAGGAGGTAGCCCGCTGACCCGAATAATTCAGGTGGTGGTGGCATCTGTGAGAAAATACAAAGTCATAGCACCTGAAGACAAGTCCCTTTTGTATGAGATCGCTGATGCAGAGTCTGTCATCAAAGGAAGCCGCAAGCTGGATCACACAAATGAATTTAGTTTCTTTGACAAAGCAGCTGTTGAGGAACCAACAGACCATATAAAGGACTCGATAGACCCTTGGAGACTTGCTACAGTTACCCAAGTGGAGGAGCTAAAGTCAATTATAAGGTTACTTCCTGTTTGGGCCACTGGTATTATCTTTGCTGCAGTCTACAATCAGATGAGCAACTTCTTTGTGTTGCAAGGCACCCTTATGGATCTTCATGTTGGCAAGTCGTCCTTTGAAATTCCAGCAGCCTCCCTCTCTGTTTTTGACCCCCTCAGTGTCATTATATGGGTCCCAATATACGACCAATTCATTGTCCCATTTGCAAGGAAATTCACAGGTCACAGGAATGGCCTAACTACACTGCAAAGAATGGGAATTGGTCTCTTCATTTCCATCTTCTCCATGGTATGTGCTGCGATTTTGGAACTCATCAGACTCCGAAGCGTTAAAGAGAACAACTACTATGATTGGGAACACATGCCCATGTCAGTTTTCTGGCAGTCTCCTCAGTATTTCCTCATAGGTGCTGCAGAAGTGTTCACTTTCATCGGACAGTTGGATTTCTTCTATGATCAAGCACCGGACGCAATGAGAAGCTTGTGTTCTGCTCTCTCACTCTCCACTGTTGCACTGGGAAACTACTTCAACTCTCTGCTGGTGACCATTGTTACCAATGTGACTACAAAGAACAACAAGCCAGGGTGGATACCAGACAATCTGAACTACGGTCACCTCGATTATTTCTTCTGGACGTTGGCAGTGCTGAGTGTTCTCAACCTTGGTGCTTTTCTGTTGATTGCCCAGTGGTACACATACAAAAAGACGGTGGGATCTATCCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

585

Amino Acids

65.13

Weight (kDa)

6.52

Isoelectric Point (pI)

25.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 65 - 517 7.5e-12 Major Facilitator Superfamily
PTR2 PF00854 111 - 541 5.9e-124 POT family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1031
AccB1I GGYRCC 1 cut(s) 1112
AccI GTMKAC 1 cut(s) 1077
AciI CCGC 2 cut(s) 776, 895
AclWI GGATC 3 cut(s) 912, 1131, 1753
AcsI RAATTY 3 cut(s) 917, 1152, 1244
AcuI CTGAAG 1 cut(s) 858
AfaI GTAC 3 cut(s) 20, 739, 1724
AfiI CCNNNNNNNGG 5 cut(s) 75, 296, 901, 967, 1012
AflIII ACRYGT 1 cut(s) 275
AgsI TTSAA 6 cut(s) 214, 429, 595, 659, 1151, 1561
AjnI CCWGG 5 cut(s) 125, 147, 403, 763, 1612
AjuI GAANNNNNNNTTGG 2 cut(s) 409, 441
AluBI AGCT 9 cut(s) 104, 192, 248, 479, 701, 901, 941, 1018, 1512
AluI AGCT 9 cut(s) 104, 192, 248, 479, 701, 901, 941, 1018, 1512
Alw21I GWGCWC 1 cut(s) 194
Alw26I GTCTC 4 cut(s) 529, 982, 1301, 1422
AlwI GGATC 3 cut(s) 912, 1131, 1753
AlwNI CAGNNNCTG 2 cut(s) 701, 878
AoxI GGCC 2 cut(s) 1050, 1264
ApeKI GCWGC 9 cut(s) 245, 464, 698, 701, 938, 1070, 1160, 1328, 1442
ApoI RAATTY 3 cut(s) 917, 1152, 1244
AspS9I GGNCC 2 cut(s) 1050, 1204
AsuHPI GGTGA 3 cut(s) 58, 1585, 1637
AvaII GGWCC 1 cut(s) 1204
BaeGI GKGCMC 1 cut(s) 45
BanI GGYRCC 1 cut(s) 1112
BanII GRGCYC 1 cut(s) 194
BbsI GAAGAC 1 cut(s) 846
Bbv12I GWGCWC 1 cut(s) 194
BbvI GCAGC 9 cut(s) 257, 476, 688, 710, 950, 1057, 1172, 1315, 1429
BccI CCATC 4 cut(s) 23, 68, 620, 1316
BcgI CGANNNNNNTGC 2 cut(s) 625, 659
BciT130I CCWGG 5 cut(s) 127, 149, 405, 765, 1614
BciVI GTATCC 1 cut(s) 1614
BclI TGATCA 1 cut(s) 1486
BcoDI GTCTC 4 cut(s) 529, 982, 1301, 1422
BfmI CTRYAG 5 cut(s) 462, 717, 996, 1071, 1443
BfuI GTATCC 1 cut(s) 1614
Bme1390I CCNGG 5 cut(s) 127, 149, 405, 765, 1614
Bme18I GGWCC 1 cut(s) 1204
BmgT120I GGNCC 2 cut(s) 1050, 1204
BmiI GGNNCC 5 cut(s) 124, 951, 1114, 1205, 1206
BmrFI CCNGG 5 cut(s) 127, 149, 405, 765, 1614
BmrI ACTGGG 2 cut(s) 1556, 1711
BmsI GCATC 4 cut(s) 304, 404, 815, 859
BmuI ACTGGG 2 cut(s) 1556, 1711
BpiI GAAGAC 1 cut(s) 846
BsaI GGTCTC 1 cut(s) 1301
BsaJI CCNNGG 7 cut(s) 148, 403, 705, 983, 1317, 1613, 1693
BsaWI WCCGGW 1 cut(s) 1495
BsaXI ACNNNNNCTCC 2 cut(s) 1007, 1037
Bsc4I CCNNNNNNNGG 5 cut(s) 75, 296, 901, 967, 1012
Bse1I ACTGG 6 cut(s) 508, 544, 602, 1060, 1551, 1717
Bse3DI GCAATG 2 cut(s) 45, 1509
BseBI CCWGG 5 cut(s) 127, 149, 405, 765, 1614
BseDI CCNNGG 7 cut(s) 148, 403, 705, 983, 1317, 1613, 1693
BseGI GGATG 3 cut(s) 192, 378, 527
BseLI CCNNNNNNNGG 5 cut(s) 75, 296, 901, 967, 1012
BseMI GCAATG 2 cut(s) 45, 1509
BseMII CTCAG 3 cut(s) 1201, 1436, 1670
BseNI ACTGG 6 cut(s) 508, 544, 602, 1060, 1551, 1717
BseRI GAGGAG 2 cut(s) 1028, 1410
BseSI GKGCMC 1 cut(s) 45
BseXI GCAGC 9 cut(s) 257, 476, 688, 710, 950, 1057, 1172, 1315, 1429
BseYI CCCAGC 1 cut(s) 100
BsgI GTGCAG 1 cut(s) 209
BshFI GGCC 2 cut(s) 1052, 1266
BshNI GGYRCC 1 cut(s) 1112
BsiHKAI GWGCWC 1 cut(s) 194
BsiSI CCGG 1 cut(s) 1496
BslFI GGGAC 6 cut(s) 91, 166, 231, 832, 1190, 1214
BslI CCNNNNNNNGG 5 cut(s) 75, 296, 901, 967, 1012
BsmAI GTCTC 4 cut(s) 529, 982, 1301, 1422
BsmFI GGGAC 6 cut(s) 91, 166, 231, 832, 1190, 1214
BsmI GAATGC 1 cut(s) 164
BsnI GGCC 2 cut(s) 1052, 1266
Bso31I GGTCTC 1 cut(s) 1301
Bsp1286I GDGCHC 2 cut(s) 45, 194
Bsp1407I TGTACA 1 cut(s) 18
Bsp143I GATC 5 cut(s) 861, 904, 1123, 1486, 1745
Bsp19I CCATGG 2 cut(s) 705, 1317
BspACI CCGC 2 cut(s) 776, 895
BspANI GGCC 2 cut(s) 1052, 1266
BspCNI CTCAG 3 cut(s) 1200, 1435, 1671
BspLI GGNNCC 5 cut(s) 124, 951, 1114, 1205, 1206
BspMAI CTGCAG 3 cut(s) 466, 1075, 1447
BspPI GGATC 3 cut(s) 912, 1131, 1753
BspT107I GGYRCC 1 cut(s) 1112
BspTNI GGTCTC 1 cut(s) 1301
BsrDI GCAATG 2 cut(s) 45, 1509
BsrGI TGTACA 1 cut(s) 18
BsrI ACTGG 6 cut(s) 508, 544, 602, 1060, 1551, 1717
BssECI CCNNGG 7 cut(s) 148, 403, 705, 983, 1317, 1613, 1693
BssMI GATC 5 cut(s) 861, 904, 1123, 1486, 1745
BssT1I CCWWGG 4 cut(s) 705, 983, 1317, 1693
Bst2UI CCWGG 5 cut(s) 127, 149, 405, 765, 1614
Bst4CI ACNGT 7 cut(s) 82, 452, 1000, 1470, 1540, 1643, 1741
Bst6I CTCTTC 1 cut(s) 1304
BstAUI TGTACA 1 cut(s) 18
BstC8I GCNNGC 4 cut(s) 136, 469, 776, 899
BstDEI CTNAG 4 cut(s) 249, 1187, 1422, 1679
BstDSI CCRYGG 2 cut(s) 705, 1317
BstEII GGTNACC 2 cut(s) 1573, 1643
BstF5I GGATG 3 cut(s) 192, 378, 527
BstKTI GATC 5 cut(s) 864, 907, 1126, 1489, 1748
BstMAI GTCTC 4 cut(s) 529, 982, 1301, 1422
BstMBI GATC 5 cut(s) 861, 904, 1123, 1486, 1745
BstMWI GCNNNNNNNGC 5 cut(s) 245, 308, 632, 707, 1499
BstNI CCWGG 5 cut(s) 127, 149, 405, 765, 1614
BstNSI RCATGY 3 cut(s) 279, 471, 1396
BstPI GGTNACC 2 cut(s) 1573, 1643
BstSCI CCNGG 5 cut(s) 125, 147, 403, 763, 1612
BstSFI CTRYAG 5 cut(s) 462, 717, 996, 1071, 1443
BstSLI GKGCMC 1 cut(s) 45
BstV1I GCAGC 9 cut(s) 257, 476, 688, 710, 950, 1057, 1172, 1315, 1429
BstV2I GAAGAC 1 cut(s) 846
BstX2I RGATCY 2 cut(s) 1123, 1745
BstYI RGATCY 2 cut(s) 1123, 1745
BsuI GTATCC 1 cut(s) 1614
BsuRI GGCC 2 cut(s) 1052, 1266
BtgI CCRYGG 2 cut(s) 705, 1317
BtsCI GGATG 3 cut(s) 192, 378, 527
BtsI GCAGTG 3 cut(s) 241, 1274, 1680
Cac8I GCNNGC 4 cut(s) 136, 469, 776, 899
CaiI CAGNNNCTG 2 cut(s) 701, 878
Cfr13I GGNCC 2 cut(s) 1050, 1204
CseI GACGC 1 cut(s) 1508
Csp6I GTAC 3 cut(s) 19, 738, 1723
CviAII CATG 9 cut(s) 276, 409, 468, 678, 706, 1130, 1318, 1393, 1399
CviQI GTAC 3 cut(s) 19, 738, 1723
DdeI CTNAG 4 cut(s) 249, 1187, 1422, 1679
DpnI GATC 5 cut(s) 863, 906, 1125, 1488, 1747
DpnII GATC 5 cut(s) 861, 904, 1123, 1486, 1745
Eam1104I CTCTTC 1 cut(s) 1304
EarI CTCTTC 1 cut(s) 1304
Ecl136II GAGCTC 1 cut(s) 192
Eco130I CCWWGG 4 cut(s) 705, 983, 1317, 1693
Eco24I GRGCYC 1 cut(s) 194
Eco31I GGTCTC 1 cut(s) 1301
Eco47I GGWCC 1 cut(s) 1204
Eco53kI GAGCTC 1 cut(s) 192
Eco57I CTGAAG 1 cut(s) 858
Eco91I GGTNACC 2 cut(s) 1573, 1643
EcoICRI GAGCTC 1 cut(s) 192
EcoO109I RGGNCCY 1 cut(s) 1204
EcoO65I GGTNACC 2 cut(s) 1573, 1643
EcoRII CCWGG 5 cut(s) 125, 147, 403, 763, 1612
EcoT14I CCWWGG 4 cut(s) 705, 983, 1317, 1693
EcoT38I GRGCYC 1 cut(s) 194
ErhI CCWWGG 4 cut(s) 705, 983, 1317, 1693
FaeI CATG 9 cut(s) 279, 412, 471, 681, 709, 1133, 1321, 1396, 1402
FalI AAGNNNNNCTT 4 cut(s) 1101, 1133, 1130, 1162
FaqI GGGAC 6 cut(s) 91, 166, 231, 832, 1190, 1214
FatI CATG 9 cut(s) 275, 408, 467, 677, 705, 1129, 1317, 1392, 1398
FauI CCCGC 1 cut(s) 783
FbaI TGATCA 1 cut(s) 1486
FblI GTMKAC 1 cut(s) 1077
FokI GGATG 3 cut(s) 199, 385, 514
FriOI GRGCYC 1 cut(s) 194
GsaI CCCAGC 1 cut(s) 104
HaeIII GGCC 2 cut(s) 1052, 1266
HapII CCGG 1 cut(s) 1496
HgaI GACGC 1 cut(s) 1508
Hin1II CATG 9 cut(s) 279, 412, 471, 681, 709, 1133, 1321, 1396, 1402
HindIII AAGCTT 1 cut(s) 1510
HinfI GANTC 5 cut(s) 376, 754, 875, 971, 1350
HpaII CCGG 1 cut(s) 1496
HphI GGTGA 3 cut(s) 58, 1585, 1637
Hpy166II GTNNAC 6 cut(s) 19, 21, 455, 1078, 1455, 1725
Hpy188I TCNGA 6 cut(s) 759, 1086, 1349, 1355, 1466, 1635
Hpy188III TCNNGA 1 cut(s) 1663
Hpy8I GTNNAC 6 cut(s) 19, 21, 455, 1078, 1455, 1725
HpyAV CCTTC 1 cut(s) 662
HpyCH4III ACNGT 7 cut(s) 82, 452, 1000, 1470, 1540, 1643, 1741
HpyCH4IV ACGT 1 cut(s) 1667
HpyF10VI GCNNNNNNNGC 5 cut(s) 245, 308, 632, 707, 1499
HpyF3I CTNAG 4 cut(s) 249, 1187, 1422, 1679
HpySE526I ACGT 1 cut(s) 1667
Hsp92II CATG 9 cut(s) 279, 412, 471, 681, 709, 1133, 1321, 1396, 1402
KflI GGGWCCC 1 cut(s) 1204
Ksp22I TGATCA 1 cut(s) 1486
Kzo9I GATC 5 cut(s) 861, 904, 1123, 1486, 1745
LmnI GCTCC 3 cut(s) 299, 536, 1015
Lsp1109I GCAGC 9 cut(s) 257, 476, 688, 710, 950, 1057, 1172, 1315, 1429
LweI GCATC 4 cut(s) 304, 404, 815, 859
MaeII ACGT 1 cut(s) 1667
MaeIII GTNAC 9 cut(s) 64, 115, 1000, 1035, 1253, 1573, 1582, 1591, 1643
MalI GATC 5 cut(s) 863, 906, 1125, 1488, 1747
MboI GATC 5 cut(s) 861, 904, 1123, 1486, 1745
MfeI CAATTG 1 cut(s) 711
MflI RGATCY 2 cut(s) 1123, 1745
MhlI GDGCHC 2 cut(s) 45, 194
MlyI GAGTC 4 cut(s) 370, 884, 965, 1344
MmeI TCCRAC 1 cut(s) 1452
MseI TTAA 2 cut(s) 513, 1362
MslI CAYNNNNRTG 5 cut(s) 371, 912, 1118, 1260, 1397
MspA1I CMGCKG 3 cut(s) 701, 778, 941
MspI CCGG 1 cut(s) 1496
MspR9I CCNGG 5 cut(s) 127, 149, 405, 765, 1614
MunI CAATTG 1 cut(s) 711
Mva1269I GAATGC 1 cut(s) 164
MvaI CCWGG 5 cut(s) 127, 149, 405, 765, 1614
MwoI GCNNNNNNNGC 5 cut(s) 245, 308, 632, 707, 1499
NcoI CCATGG 2 cut(s) 705, 1317
NdeII GATC 5 cut(s) 861, 904, 1123, 1486, 1745
NlaIII CATG 9 cut(s) 279, 412, 471, 681, 709, 1133, 1321, 1396, 1402
NlaIV GGNNCC 5 cut(s) 124, 951, 1114, 1205, 1206
NmuCI GTSAC 6 cut(s) 64, 115, 1253, 1573, 1591, 1643
NspI RCATGY 3 cut(s) 279, 471, 1396
PaeI GCATGC 1 cut(s) 471
PciI ACATGT 1 cut(s) 275
PcsI WCGNNNNNNNCGW 1 cut(s) 1647
PctI GAATGC 1 cut(s) 164
PfeI GAWTC 1 cut(s) 754
PflFI GACNNNGTC 1 cut(s) 388
PleI GAGTC 4 cut(s) 370, 883, 965, 1344
PpsI GAGTC 4 cut(s) 370, 883, 965, 1344
PpuMI RGGWCCY 1 cut(s) 1204
PscI ACATGT 1 cut(s) 275
PsiI TTATAA 1 cut(s) 1031
Psp124BI GAGCTC 1 cut(s) 194
Psp5II RGGWCCY 1 cut(s) 1204
Psp6I CCWGG 5 cut(s) 125, 147, 403, 763, 1612
PspEI GGTNACC 2 cut(s) 1573, 1643
PspFI CCCAGC 1 cut(s) 100
PspGI CCWGG 5 cut(s) 125, 147, 403, 763, 1612
PspN4I GGNNCC 5 cut(s) 124, 951, 1114, 1205, 1206
PspPI GGNCC 2 cut(s) 1050, 1204
PspPPI RGGWCCY 1 cut(s) 1204
PstI CTGCAG 3 cut(s) 466, 1075, 1447
PstNI CAGNNNCTG 2 cut(s) 701, 878
PsuI RGATCY 2 cut(s) 1123, 1745
PsyI GACNNNGTC 1 cut(s) 388
PvuII CAGCTG 2 cut(s) 701, 941
RsaI GTAC 3 cut(s) 20, 739, 1724
RsaNI GTAC 3 cut(s) 19, 738, 1723
RseI CAYNNNNRTG 5 cut(s) 371, 912, 1118, 1260, 1397
SacI GAGCTC 1 cut(s) 194
SaqAI TTAA 2 cut(s) 513, 1362
Sau3AI GATC 5 cut(s) 861, 904, 1123, 1486, 1745
Sau96I GGNCC 2 cut(s) 1050, 1204
SchI GAGTC 4 cut(s) 370, 884, 965, 1344
ScrFI CCNGG 5 cut(s) 127, 149, 405, 765, 1614
SduI GDGCHC 2 cut(s) 45, 194
SfaNI GCATC 4 cut(s) 304, 404, 815, 859
SfcI CTRYAG 5 cut(s) 462, 717, 996, 1071, 1443
SinI GGWCC 1 cut(s) 1204
SmiMI CAYNNNNRTG 5 cut(s) 371, 912, 1118, 1260, 1397
SphI GCATGC 1 cut(s) 471
SsiI CCGC 2 cut(s) 776, 895
SstI GAGCTC 1 cut(s) 194
StyD4I CCNGG 5 cut(s) 125, 147, 403, 763, 1612
StyI CCWWGG 4 cut(s) 705, 983, 1317, 1693
TaaI ACNGT 7 cut(s) 82, 452, 1000, 1470, 1540, 1643, 1741
TaiI ACGT 1 cut(s) 1670
TaqI TCGA 2 cut(s) 974, 1650
TatI WGTACW 1 cut(s) 18
TauI GCSGC 1 cut(s) 897
TfiI GAWTC 1 cut(s) 754
Tru1I TTAA 2 cut(s) 513, 1362
Tru9I TTAA 2 cut(s) 513, 1362
TseFI GTSAC 6 cut(s) 64, 115, 1253, 1573, 1591, 1643
TseI GCWGC 9 cut(s) 245, 464, 698, 701, 938, 1070, 1160, 1328, 1442
Tsp45I GTSAC 6 cut(s) 64, 115, 1253, 1573, 1591, 1643
TspDTI ATGAA 8 cut(s) 425, 463, 677, 930, 1118, 1213, 1291, 1450
TspGWI ACGGA 1 cut(s) 1742
Tth111I GACNNNGTC 1 cut(s) 388
VpaK11BI GGWCC 1 cut(s) 1204
XapI RAATTY 3 cut(s) 917, 1152, 1244
XceI RCATGY 3 cut(s) 279, 471, 1396
XcmI CCANNNNNNNNNTGG 2 cut(s) 1315, 1543
XmiI GTMKAC 1 cut(s) 1077
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.