MD10G1023600.v1.1

Histidine

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Forward (+)
2958963 .. 2961942
2980 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1023600.v1.1.491

Sequence Viewer

Length: 1440 bp
ATGGATCACGAGAACGGAGCTGTGGCGGTGGAGATGCTATCCGATGATTTCGATCCCACGGCTGTGGTTGCGGAGCCTTTGCCTCCGGTTGTAACCAGCACCGACGACTGCGATCTCCTCGGAAAATTGGCCGAAGACCGCAAAGGTAGCCGGGAGAAACAGATGGTTCTCGGCCGGAACGTGCACACCACGTGCCTCGCCGTGACGGAGCCCGAATCCAACGACGATTTCACCGGCGATAAGGAGGCGTACATGGCCAGCGTCCTCGCCCGCTACCGCAAAACCCTCATCGAGAGGACCAAGCACCATCTGGGTTATCCTTACAATTTGGACTTCGACTATGGTGCTCTGACGCAGCTTCAGCATTTCTCCATCAACAATTTGGGCGATCCGTTTATCGAGAGCAACTACGGTGTCCATTCAAGGCAGTTCGAGGTCGGTGTTCTCGATTGGTTTGCTCGGTTGTGGGAGATTGAGAAGAATGAGTATTGGGGATACATCACCAATTGCGGCACGGAAGGCAATCTTCACGGAGTCTTAGTTGGGAGAGAAGTATTTCCAGATGGGATTCTGTATGCTTCTCGAGAATCGCATTATTCGATATTTAAAGCTGCCCGAATGTATAGAATGGAATGCGAAAAGATTGATTGTCTGATCTCTGGTGAGATTGATTGTGCGGATTTTAAAACTAAACTTCTTGCTCACCAGGATAAACCCGCCATCATCAACGTTAATATTGGAACTACTGTCAAAGGAGCTGTTGACGACCTGGATCTCGTCATACAGACCCTTGAAGAATGTGGATACAAGCAAGATCGTTTCTACATTCACTGCGACGGAGCATTATTTGGACTTATGATGCCTTTTGTCAAACGTGCACCAAAAGTTTCGTTCAAGAAGCCCATTGGGAGTGTCAGCGTTTCTGGTCACAAGTTTGTTGGATGTCCAATGCCTTGTGGTGTTCAGATAACAAGGCTGGAGCACATTAATGCCCTTTCAAGGAATGTAGAATACCTAGCTTCGAGGGATGCCACAATCATGGGAAGCCGGAACGGTCATGCTCCAATTTTCTTATGGTACACGCTCAACAAAAAAGGTTACTCGGGGTTCCAAAAAGAAGTCCAGAAGTGTCTTAGAAATGCTCACTACCTGAAGGGCCGCCTTCGTGATGCTGGAATCAGTGCCATGCTGAACGAGCTAAGTAGCACAGTGGTGTTTGAGCGGCCTAAGGATGAAGAGTTTGTTCGTAGGTGGCAGTTGGCTTGCCAAGGAAATATTGCGCATGTTGTGGTGATGCCAAGTGTCAACATCGAAAAGTTGGACGATTTCTTGAATGAACTAGTTGAAAAACGCTCAACTTGGTACGACGAGAAAGTTCAGGCTCCATGTATTGCAGCTGATGTAGGAACCGAGAATTGTTCCTGCGGGCAGCACAAATGA

Protein Analysis

480

Amino Acids

53.96

Weight (kDa)

5.77

Isoelectric Point (pI)

42.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pyridoxal_deC PF00282 190 - 403 4.5e-22 Pyridoxal-dependent decarboxylase conserved domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012320)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1281
AccBSI CCGCTC 1 cut(s) 1222
AclI AACGTT 1 cut(s) 729
AclWI GGATC 4 cut(s) 12, 47, 383, 780
AcoI YGGCCR 3 cut(s) 129, 172, 255
AcuI CTGAAG 2 cut(s) 344, 1172
AcvI CACGTG 1 cut(s) 192
AdeI CACNNNGTG 1 cut(s) 192
AfaI GTAC 3 cut(s) 251, 1079, 1364
AfiI CCNNNNNNNGG 1 cut(s) 999
AgsI TTSAA 6 cut(s) 423, 794, 895, 999, 1333, 1346
AhlI ACTAGT 1 cut(s) 1339
AjnI CCWGG 2 cut(s) 705, 768
AjuI GAANNNNNNNTTGG 2 cut(s) 212, 244
AleI CACNNNNGTG 2 cut(s) 62, 1211
AluBI AGCT 7 cut(s) 20, 358, 611, 758, 1019, 1198, 1397
AluI AGCT 7 cut(s) 20, 358, 611, 758, 1019, 1198, 1397
Alw21I GWGCWC 4 cut(s) 186, 349, 880, 984
Alw44I GTGCAC 2 cut(s) 182, 876
AlwI GGATC 4 cut(s) 12, 47, 383, 780
Ama87I CYCGRG 2 cut(s) 582, 1102
AoxI GGCC 5 cut(s) 129, 172, 255, 1156, 1223
ApaLI GTGCAC 2 cut(s) 182, 876
ApeKI GCWGC 4 cut(s) 355, 611, 1394, 1429
AseI ATTAAT 1 cut(s) 987
Asp700I GAANNNNTTC 1 cut(s) 555
AspLEI GCGC 1 cut(s) 1282
AspS9I GGNCC 2 cut(s) 297, 1156
AsuC2I CCSGG 1 cut(s) 152
AsuHPI GGTGA 5 cut(s) 223, 493, 674, 695, 1303
AvaI CYCGRG 2 cut(s) 582, 1102
AvaII GGWCC 1 cut(s) 297
AxyI CCTNAGG 1 cut(s) 1227
BaeGI GKGCMC 2 cut(s) 186, 880
BalI TGGCCA 1 cut(s) 257
BanII GRGCYC 1 cut(s) 213
BauI CACGAG 1 cut(s) 8
BbrPI CACGTG 1 cut(s) 192
BbsI GAAGAC 1 cut(s) 141
Bbv12I GWGCWC 4 cut(s) 186, 349, 880, 984
BbvI GCAGC 3 cut(s) 367, 598, 1406
BccI CCATC 5 cut(s) 157, 315, 380, 557, 728
BceAI ACGGC 2 cut(s) 75, 185
BcgI CGANNNNNNTGC 4 cut(s) 326, 360, 437, 471
BciT130I CCWGG 2 cut(s) 707, 770
BciVI GTATCC 2 cut(s) 488, 797
BcnI CCSGG 1 cut(s) 152
BcuI ACTAGT 1 cut(s) 1339
BfaI CTAG 2 cut(s) 1016, 1340
BfuI GTATCC 2 cut(s) 488, 797
BisI GCNGC 7 cut(s) 356, 511, 612, 1159, 1223, 1395, 1430
BlsI GCNGC 7 cut(s) 357, 512, 613, 1160, 1224, 1396, 1431
Bme1390I CCNGG 3 cut(s) 152, 707, 770
Bme18I GGWCC 1 cut(s) 297
BmeT110I CYCGRG 2 cut(s) 582, 1102
BmgT120I GGNCC 2 cut(s) 297, 1156
BmiI GGNNCC 5 cut(s) 75, 210, 1109, 1383, 1408
BmrFI CCNGG 3 cut(s) 152, 707, 770
BmsI GCATC 5 cut(s) 24, 849, 1018, 1159, 1284
BpiI GAAGAC 1 cut(s) 141
BpmI CTGGAG 1 cut(s) 998
BpuMI CCSGG 1 cut(s) 152
BsaAI YACGTR 1 cut(s) 192
BsaBI GATNNNNATC 1 cut(s) 51
BsaJI CCNNGG 3 cut(s) 57, 118, 1267
BsaWI WCCGGW 1 cut(s) 85
BsaXI ACNNNNNCTCC 2 cut(s) 525, 555
Bsc4I CCNNNNNNNGG 1 cut(s) 999
Bse118I RCCGGY 1 cut(s) 233
Bse21I CCTNAGG 1 cut(s) 1227
Bse8I GATNNNNATC 1 cut(s) 51
BseBI CCWGG 2 cut(s) 707, 770
BseDI CCNNGG 3 cut(s) 57, 118, 1267
BseGI GGATG 3 cut(s) 947, 1033, 1237
BseJI GATNNNNATC 1 cut(s) 51
BseLI CCNNNNNNNGG 1 cut(s) 999
BseRI GAGGAG 1 cut(s) 107
BseSI GKGCMC 2 cut(s) 186, 880
BseX3I CGGCCG 1 cut(s) 172
BseXI GCAGC 3 cut(s) 367, 598, 1406
Bsh1285I CGRYCG 1 cut(s) 175
BshFI GGCC 5 cut(s) 131, 174, 257, 1158, 1225
BsiEI CGRYCG 1 cut(s) 175
BsiHKAI GWGCWC 4 cut(s) 186, 349, 880, 984
BsiHKCI CYCGRG 2 cut(s) 582, 1102
BsiSI CCGG 5 cut(s) 86, 151, 175, 234, 1048
BslI CCNNNNNNNGG 1 cut(s) 999
BsmI GAATGC 1 cut(s) 638
BsnI GGCC 5 cut(s) 131, 174, 257, 1158, 1225
BsoBI CYCGRG 2 cut(s) 582, 1102
Bsp1286I GDGCHC 5 cut(s) 186, 213, 349, 880, 984
Bsp143I GATC 7 cut(s) 4, 52, 112, 388, 654, 772, 814
BspANI GGCC 5 cut(s) 131, 174, 257, 1158, 1225
BspLI GGNNCC 5 cut(s) 75, 210, 1109, 1383, 1408
BspPI GGATC 4 cut(s) 12, 47, 383, 780
BsrBI CCGCTC 1 cut(s) 1222
BsrFI RCCGGY 1 cut(s) 233
BssAI RCCGGY 1 cut(s) 233
BssECI CCNNGG 3 cut(s) 57, 118, 1267
BssMI GATC 7 cut(s) 4, 52, 112, 388, 654, 772, 814
BssSI CACGAG 1 cut(s) 8
BssT1I CCWWGG 1 cut(s) 1267
Bst2BI CACGAG 1 cut(s) 8
Bst2UI CCWGG 2 cut(s) 707, 770
Bst4CI ACNGT 4 cut(s) 413, 748, 1055, 1210
Bst6I CTCTTC 1 cut(s) 1230
BstBAI YACGTR 1 cut(s) 192
BstC8I GCNNGC 4 cut(s) 259, 271, 1264, 1427
BstDEI CTNAG 4 cut(s) 538, 1133, 1199, 1227
BstDSI CCRYGG 1 cut(s) 57
BstF5I GGATG 3 cut(s) 947, 1033, 1237
BstHHI GCGC 1 cut(s) 1282
BstKTI GATC 7 cut(s) 7, 55, 115, 391, 657, 775, 817
BstMBI GATC 7 cut(s) 4, 52, 112, 388, 654, 772, 814
BstMCI CGRYCG 1 cut(s) 175
BstMWI GCNNNNNNNGC 6 cut(s) 68, 147, 254, 361, 519, 1195
BstNI CCWGG 2 cut(s) 707, 770
BstNSI RCATGY 1 cut(s) 1286
BstSCI CCNGG 3 cut(s) 150, 705, 768
BstSLI GKGCMC 2 cut(s) 186, 880
BstV1I GCAGC 3 cut(s) 367, 598, 1406
BstV2I GAAGAC 1 cut(s) 141
BstX2I RGATCY 1 cut(s) 772
BstXI CCANNNNNNTGG 2 cut(s) 64, 1039
BstYI RGATCY 1 cut(s) 772
BstZI CGGCCG 1 cut(s) 172
Bsu36I CCTNAGG 1 cut(s) 1227
BsuI GTATCC 2 cut(s) 488, 797
BsuRI GGCC 5 cut(s) 131, 174, 257, 1158, 1225
BtgI CCRYGG 1 cut(s) 57
BtsCI GGATG 3 cut(s) 947, 1033, 1237
BtsI GCAGTG 1 cut(s) 829
BtsIMutI CAGTG 3 cut(s) 829, 1186, 1215
Cac8I GCNNGC 4 cut(s) 259, 271, 1264, 1427
CfoI GCGC 1 cut(s) 1282
Cfr10I RCCGGY 1 cut(s) 233
Cfr13I GGNCC 2 cut(s) 297, 1156
CseI GACGC 2 cut(s) 250, 361
Csp6I GTAC 3 cut(s) 250, 1078, 1363
CviAII CATG 6 cut(s) 253, 1039, 1058, 1186, 1283, 1386
CviQI GTAC 3 cut(s) 250, 1078, 1363
DdeI CTNAG 4 cut(s) 538, 1133, 1199, 1227
DpnI GATC 7 cut(s) 6, 54, 114, 390, 656, 774, 816
DpnII GATC 7 cut(s) 4, 52, 112, 388, 654, 772, 814
DraI TTTAAA 2 cut(s) 607, 685
DraIII CACNNNGTG 1 cut(s) 192
EaeI YGGCCR 3 cut(s) 129, 172, 255
EagI CGGCCG 1 cut(s) 172
Eam1104I CTCTTC 1 cut(s) 1230
EarI CTCTTC 1 cut(s) 1230
EclXI CGGCCG 1 cut(s) 172
Eco130I CCWWGG 1 cut(s) 1267
Eco24I GRGCYC 1 cut(s) 213
Eco47I GGWCC 1 cut(s) 297
Eco52I CGGCCG 1 cut(s) 172
Eco57I CTGAAG 2 cut(s) 344, 1172
Eco72I CACGTG 1 cut(s) 192
Eco81I CCTNAGG 1 cut(s) 1227
Eco88I CYCGRG 2 cut(s) 582, 1102
EcoRII CCWGG 2 cut(s) 705, 768
EcoT14I CCWWGG 1 cut(s) 1267
EcoT38I GRGCYC 1 cut(s) 213
ErhI CCWWGG 1 cut(s) 1267
FaeI CATG 6 cut(s) 256, 1042, 1061, 1189, 1286, 1389
FalI AAGNNNNNCTT 2 cut(s) 510, 542
FatI CATG 6 cut(s) 252, 1038, 1057, 1185, 1282, 1385
FauI CCCGC 3 cut(s) 278, 724, 1418
Fnu4HI GCNGC 7 cut(s) 356, 511, 612, 1159, 1223, 1395, 1430
FokI GGATG 3 cut(s) 954, 1040, 1244
FriOI GRGCYC 1 cut(s) 213
Fsp4HI GCNGC 7 cut(s) 356, 511, 612, 1159, 1223, 1395, 1430
FspBI CTAG 2 cut(s) 1016, 1340
FspI TGCGCA 1 cut(s) 1281
GlaI GCGC 1 cut(s) 1281
GluI GCNGC 7 cut(s) 356, 511, 612, 1159, 1223, 1395, 1430
GsuI CTGGAG 1 cut(s) 998
HaeIII GGCC 5 cut(s) 131, 174, 257, 1158, 1225
HapII CCGG 5 cut(s) 86, 151, 175, 234, 1048
HgaI GACGC 2 cut(s) 250, 361
HhaI GCGC 1 cut(s) 1282
Hin1II CATG 6 cut(s) 256, 1042, 1061, 1189, 1286, 1389
Hin6I GCGC 1 cut(s) 1280
HinP1I GCGC 1 cut(s) 1280
HincII GTYRAC 2 cut(s) 763, 1306
HindII GTYRAC 2 cut(s) 763, 1306
HinfI GANTC 5 cut(s) 215, 534, 568, 587, 1176
HpaII CCGG 5 cut(s) 86, 151, 175, 234, 1048
HphI GGTGA 5 cut(s) 223, 493, 674, 695, 1303
Hpy166II GTNNAC 5 cut(s) 184, 763, 878, 1080, 1306
Hpy188I TCNGA 5 cut(s) 43, 122, 351, 654, 966
Hpy8I GTNNAC 5 cut(s) 184, 763, 878, 1080, 1306
Hpy99I CGWCG 4 cut(s) 107, 227, 839, 1370
HpyAV CCTTC 3 cut(s) 512, 1147, 1172
HpyCH4III ACNGT 4 cut(s) 413, 748, 1055, 1210
HpyCH4IV ACGT 4 cut(s) 180, 191, 729, 874
HpyCH4V TGCA 3 cut(s) 184, 878, 1394
HpyF10VI GCNNNNNNNGC 6 cut(s) 68, 147, 254, 361, 519, 1195
HpyF3I CTNAG 4 cut(s) 538, 1133, 1199, 1227
HpySE526I ACGT 4 cut(s) 180, 191, 729, 874
Hsp92II CATG 6 cut(s) 256, 1042, 1061, 1189, 1286, 1389
HspAI GCGC 1 cut(s) 1280
Kzo9I GATC 7 cut(s) 4, 52, 112, 388, 654, 772, 814
LmnI GCTCC 8 cut(s) 17, 73, 208, 755, 839, 979, 1066, 1387
Lsp1109I GCAGC 3 cut(s) 367, 598, 1406
LweI GCATC 5 cut(s) 24, 849, 1018, 1159, 1284
MaeI CTAG 2 cut(s) 1016, 1340
MaeII ACGT 4 cut(s) 180, 191, 729, 874
MaeIII GTNAC 4 cut(s) 91, 202, 926, 1097
MalI GATC 7 cut(s) 6, 54, 114, 390, 656, 774, 816
MbiI CCGCTC 1 cut(s) 1222
MboI GATC 7 cut(s) 4, 52, 112, 388, 654, 772, 814
MboII GAAGA 5 cut(s) 146, 490, 518, 806, 1247
MfeI CAATTG 1 cut(s) 505
MflI RGATCY 1 cut(s) 772
MhlI GDGCHC 5 cut(s) 186, 213, 349, 880, 984
MlsI TGGCCA 1 cut(s) 257
MluCI AATT 6 cut(s) 125, 325, 379, 505, 1065, 1414
MluNI TGGCCA 1 cut(s) 257
MlyI GAGTC 1 cut(s) 543
MmeI TCCRAC 3 cut(s) 243, 919, 1299
MnlI CCTC 9 cut(s) 93, 128, 206, 238, 275, 288, 296, 427, 1017
Mox20I TGGCCA 1 cut(s) 257
MroXI GAANNNNTTC 1 cut(s) 555
MscI TGGCCA 1 cut(s) 257
MseI TTAA 4 cut(s) 606, 684, 732, 987
MslI CAYNNNNRTG 4 cut(s) 62, 987, 1037, 1211
Msp20I TGGCCA 1 cut(s) 257
MspA1I CMGCKG 1 cut(s) 1397
MspI CCGG 5 cut(s) 86, 151, 175, 234, 1048
MspR9I CCNGG 3 cut(s) 152, 707, 770
MunI CAATTG 1 cut(s) 505
Mva1269I GAATGC 1 cut(s) 638
MvaI CCWGG 2 cut(s) 707, 770
MwoI GCNNNNNNNGC 6 cut(s) 68, 147, 254, 361, 519, 1195
NciI CCSGG 1 cut(s) 152
NdeII GATC 7 cut(s) 4, 52, 112, 388, 654, 772, 814
NlaIII CATG 6 cut(s) 256, 1042, 1061, 1189, 1286, 1389
NlaIV GGNNCC 5 cut(s) 75, 210, 1109, 1383, 1408
NmeAIII GCCGAG 1 cut(s) 150
NmuCI GTSAC 2 cut(s) 202, 926
NsbI TGCGCA 1 cut(s) 1281
NspI RCATGY 1 cut(s) 1286
OliI CACNNNNGTG 2 cut(s) 62, 1211
PaeR7I CTCGAG 1 cut(s) 582
PcsI WCGNNNNNNNCGW 3 cut(s) 177, 444, 596
PctI GAATGC 1 cut(s) 638
PdmI GAANNNNTTC 1 cut(s) 555
PfeI GAWTC 4 cut(s) 215, 568, 587, 1176
PkrI GCNGC 7 cut(s) 357, 512, 613, 1160, 1224, 1396, 1431
PleI GAGTC 1 cut(s) 542
PmaCI CACGTG 1 cut(s) 192
PmlI CACGTG 1 cut(s) 192
PpsI GAGTC 1 cut(s) 542
Ppu21I YACGTR 1 cut(s) 192
PshBI ATTAAT 1 cut(s) 987
Psp1406I AACGTT 1 cut(s) 729
Psp6I CCWGG 2 cut(s) 705, 768
PspCI CACGTG 1 cut(s) 192
PspGI CCWGG 2 cut(s) 705, 768
PspN4I GGNNCC 5 cut(s) 75, 210, 1109, 1383, 1408
PspPI GGNCC 2 cut(s) 297, 1156
PsuI RGATCY 1 cut(s) 772
PvuII CAGCTG 1 cut(s) 1397
RsaI GTAC 3 cut(s) 251, 1079, 1364
RsaNI GTAC 3 cut(s) 250, 1078, 1363
RseI CAYNNNNRTG 4 cut(s) 62, 987, 1037, 1211
SaqAI TTAA 4 cut(s) 606, 684, 732, 987
SatI GCNGC 7 cut(s) 356, 511, 612, 1159, 1223, 1395, 1430
Sau3AI GATC 7 cut(s) 4, 52, 112, 388, 654, 772, 814
Sau96I GGNCC 2 cut(s) 297, 1156
SchI GAGTC 1 cut(s) 543
ScrFI CCNGG 3 cut(s) 152, 707, 770
SduI GDGCHC 5 cut(s) 186, 213, 349, 880, 984
SfaNI GCATC 5 cut(s) 24, 849, 1018, 1159, 1284
Sfr274I CTCGAG 1 cut(s) 582
SgrAI CRCCGGYG 1 cut(s) 233
SinI GGWCC 1 cut(s) 297
SlaI CTCGAG 1 cut(s) 582
SmiMI CAYNNNNRTG 4 cut(s) 62, 987, 1037, 1211
SmlI CTYRAG 1 cut(s) 582
SmoI CTYRAG 1 cut(s) 582
SpeI ACTAGT 1 cut(s) 1339
Sse9I AATT 6 cut(s) 125, 325, 379, 505, 1065, 1414
SspI AATATT 2 cut(s) 736, 1276
SspMI CTAG 2 cut(s) 1016, 1340
StyD4I CCNGG 3 cut(s) 150, 705, 768
StyI CCWWGG 1 cut(s) 1267
TaaI ACNGT 4 cut(s) 413, 748, 1055, 1210
TaiI ACGT 4 cut(s) 183, 194, 732, 877
TasI AATT 6 cut(s) 125, 325, 379, 505, 1065, 1414
TauI GCSGC 3 cut(s) 513, 1161, 1225
TfiI GAWTC 4 cut(s) 215, 568, 587, 1176
Tru1I TTAA 4 cut(s) 606, 684, 732, 987
Tru9I TTAA 4 cut(s) 606, 684, 732, 987
TscAI CASTG 3 cut(s) 836, 1186, 1215
TseFI GTSAC 2 cut(s) 202, 926
TseI GCWGC 4 cut(s) 355, 611, 1394, 1429
Tsp45I GTSAC 2 cut(s) 202, 926
TspDTI ATGAA 2 cut(s) 1248, 1350
TspGWI ACGGA 6 cut(s) 30, 221, 381, 530, 546, 852
TspRI CASTG 3 cut(s) 836, 1186, 1215
VneI GTGCAC 2 cut(s) 182, 876
VpaK11BI GGWCC 1 cut(s) 297
VspI ATTAAT 1 cut(s) 987
XceI RCATGY 1 cut(s) 1286
XcmI CCANNNNNNNNNTGG 3 cut(s) 307, 379, 1071
XhoI CTCGAG 1 cut(s) 582
XmnI GAANNNNTTC 1 cut(s) 555
XspI CTAG 2 cut(s) 1016, 1340
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.