pycom10g01560

Histidine

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
1636158 .. 1636559
402 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g01560.1

Sequence Viewer

Length: 402 bp
ATGGGAAGCCGGAACGGTCATGCTCCAATTTTCTTATGGTACACGCTCAACAAAAAAGGTTACTCGGGGTTCCAAAAAGAGGTCCAGAGGTGTCTTAGAAATGCTCACTACCTGAAGGGCCGCCTTCGTGATGCTGGAATCAGTGCCATGCTGAATGAGCTAAGCAGCACAGTGGTGTTTGAGCGGCCTAAGGATGAAGAGTTTGTTCGTAGGTGGCAGTTGGCGTGCCAAGGAAATATTGCGCATGTTGTGGTGATGCCGAGTGTCAACATCGAAAAGTTGGACGATTTCTTGAGTGAACTAGTTGAAAAACGCTCAACTTGGTACGACGAGAAAGTTCAGCCTCCATGTATTGCTGCTGATGTAGGAACTGAGAATTGTTCCTGCGGGCAGCACAAGTGA

Protein Analysis

134

Amino Acids

15.19

Weight (kDa)

8.29

Isoelectric Point (pI)

62.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012320)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 243
AccBSI CCGCTC 1 cut(s) 184
AciI CCGC 3 cut(s) 121, 184, 387
AcuI CTGAAG 1 cut(s) 134
AfaI GTAC 2 cut(s) 41, 326
AfiI CCNNNNNNNGG 1 cut(s) 79
AgsI TTSAA 1 cut(s) 308
AhlI ACTAGT 1 cut(s) 301
AleI CACNNNNGTG 1 cut(s) 173
AluBI AGCT 1 cut(s) 160
AluI AGCT 1 cut(s) 160
Ama87I CYCGRG 1 cut(s) 64
AoxI GGCC 2 cut(s) 118, 185
ApeKI GCWGC 3 cut(s) 165, 356, 391
AspLEI GCGC 1 cut(s) 244
AspS9I GGNCC 2 cut(s) 82, 118
AsuHPI GGTGA 1 cut(s) 265
AvaI CYCGRG 1 cut(s) 64
AvaII GGWCC 1 cut(s) 82
AxyI CCTNAGG 1 cut(s) 189
BbvI GCAGC 2 cut(s) 177, 343
BcuI ACTAGT 1 cut(s) 301
BfaI CTAG 1 cut(s) 302
BisI GCNGC 5 cut(s) 121, 166, 185, 357, 392
BlpI GCTNAGC 1 cut(s) 161
BlsI GCNGC 5 cut(s) 122, 167, 186, 358, 393
Bme18I GGWCC 1 cut(s) 82
BmeT110I CYCGRG 1 cut(s) 64
BmgT120I GGNCC 2 cut(s) 82, 118
BmiI GGNNCC 1 cut(s) 71
BmsI GCATC 2 cut(s) 121, 246
Bpu1102I GCTNAGC 1 cut(s) 161
BpuEI CTTGAG 1 cut(s) 313
BsaJI CCNNGG 1 cut(s) 229
Bsc4I CCNNNNNNNGG 1 cut(s) 79
Bse21I CCTNAGG 1 cut(s) 189
BseDI CCNNGG 1 cut(s) 229
BseGI GGATG 1 cut(s) 199
BseLI CCNNNNNNNGG 1 cut(s) 79
BseMII CTCAG 1 cut(s) 363
BseXI GCAGC 2 cut(s) 177, 343
BshFI GGCC 2 cut(s) 120, 187
BsiHKCI CYCGRG 1 cut(s) 64
BsiSI CCGG 1 cut(s) 10
BslI CCNNNNNNNGG 1 cut(s) 79
BsnI GGCC 2 cut(s) 120, 187
BsoBI CYCGRG 1 cut(s) 64
Bsp1720I GCTNAGC 1 cut(s) 161
BspACI CCGC 3 cut(s) 121, 184, 387
BspANI GGCC 2 cut(s) 120, 187
BspCNI CTCAG 1 cut(s) 364
BspLI GGNNCC 1 cut(s) 71
BsrBI CCGCTC 1 cut(s) 184
BssECI CCNNGG 1 cut(s) 229
BssT1I CCWWGG 1 cut(s) 229
Bst4CI ACNGT 2 cut(s) 17, 172
Bst6I CTCTTC 1 cut(s) 192
BstC8I GCNNGC 2 cut(s) 226, 389
BstDEI CTNAG 4 cut(s) 95, 161, 189, 372
BstF5I GGATG 1 cut(s) 199
BstHHI GCGC 1 cut(s) 244
BstMWI GCNNNNNNNGC 1 cut(s) 157
BstNSI RCATGY 1 cut(s) 248
BstV1I GCAGC 2 cut(s) 177, 343
Bsu36I CCTNAGG 1 cut(s) 189
BsuRI GGCC 2 cut(s) 120, 187
BtsCI GGATG 1 cut(s) 199
BtsIMutI CAGTG 2 cut(s) 148, 177
Cac8I GCNNGC 2 cut(s) 226, 389
CfoI GCGC 1 cut(s) 244
Cfr13I GGNCC 2 cut(s) 82, 118
Csp6I GTAC 2 cut(s) 40, 325
CviAII CATG 4 cut(s) 20, 148, 245, 348
CviJI RGCY 5 cut(s) 9, 120, 160, 187, 343
CviKI_1 RGCY 5 cut(s) 9, 120, 160, 187, 343
CviQI GTAC 2 cut(s) 40, 325
DdeI CTNAG 4 cut(s) 95, 161, 189, 372
Eam1104I CTCTTC 1 cut(s) 192
EarI CTCTTC 1 cut(s) 192
Eco130I CCWWGG 1 cut(s) 229
Eco47I GGWCC 1 cut(s) 82
Eco57I CTGAAG 1 cut(s) 134
Eco81I CCTNAGG 1 cut(s) 189
Eco88I CYCGRG 1 cut(s) 64
EcoT14I CCWWGG 1 cut(s) 229
ErhI CCWWGG 1 cut(s) 229
FaeI CATG 4 cut(s) 23, 151, 248, 351
FaiI YATR 5 cut(s) 21, 37, 149, 246, 349
FatI CATG 4 cut(s) 19, 147, 244, 347
FauI CCCGC 1 cut(s) 380
Fnu4HI GCNGC 5 cut(s) 121, 166, 185, 357, 392
FokI GGATG 1 cut(s) 206
Fsp4HI GCNGC 5 cut(s) 121, 166, 185, 357, 392
FspBI CTAG 1 cut(s) 302
FspI TGCGCA 1 cut(s) 243
GlaI GCGC 1 cut(s) 243
GluI GCNGC 5 cut(s) 121, 166, 185, 357, 392
HaeIII GGCC 2 cut(s) 120, 187
HapII CCGG 1 cut(s) 10
HhaI GCGC 1 cut(s) 244
Hin1II CATG 4 cut(s) 23, 151, 248, 351
Hin6I GCGC 1 cut(s) 242
HinP1I GCGC 1 cut(s) 242
HincII GTYRAC 1 cut(s) 268
HindII GTYRAC 1 cut(s) 268
HinfI GANTC 1 cut(s) 138
HpaII CCGG 1 cut(s) 10
HphI GGTGA 1 cut(s) 265
Hpy166II GTNNAC 3 cut(s) 42, 268, 299
Hpy188III TCNNGA 3 cut(s) 85, 128, 292
Hpy8I GTNNAC 3 cut(s) 42, 268, 299
Hpy99I CGWCG 1 cut(s) 332
HpyAV CCTTC 2 cut(s) 109, 134
HpyCH4III ACNGT 2 cut(s) 17, 172
HpyF10VI GCNNNNNNNGC 1 cut(s) 157
HpyF3I CTNAG 4 cut(s) 95, 161, 189, 372
Hsp92II CATG 4 cut(s) 23, 151, 248, 351
HspAI GCGC 1 cut(s) 242
LmnI GCTCC 1 cut(s) 28
LpnPI CCDG 5 cut(s) 23, 98, 120, 125, 397
Lsp1109I GCAGC 2 cut(s) 177, 343
LweI GCATC 2 cut(s) 121, 246
MaeI CTAG 1 cut(s) 302
MaeIII GTNAC 1 cut(s) 59
MbiI CCGCTC 1 cut(s) 184
MboII GAAGA 1 cut(s) 209
MluCI AATT 2 cut(s) 27, 376
MmeI TCCRAC 1 cut(s) 261
MnlI CCTC 3 cut(s) 73, 81, 354
MslI CAYNNNNRTG 1 cut(s) 173
MspI CCGG 1 cut(s) 10
MwoI GCNNNNNNNGC 1 cut(s) 157
NlaIII CATG 4 cut(s) 23, 151, 248, 351
NlaIV GGNNCC 1 cut(s) 71
NmeAIII GCCGAG 1 cut(s) 285
NsbI TGCGCA 1 cut(s) 243
NspI RCATGY 1 cut(s) 248
OliI CACNNNNGTG 1 cut(s) 173
PfeI GAWTC 1 cut(s) 138
PkrI GCNGC 5 cut(s) 122, 167, 186, 358, 393
PspN4I GGNNCC 1 cut(s) 71
PspPI GGNCC 2 cut(s) 82, 118
RsaI GTAC 2 cut(s) 41, 326
RsaNI GTAC 2 cut(s) 40, 325
RseI CAYNNNNRTG 1 cut(s) 173
SatI GCNGC 5 cut(s) 121, 166, 185, 357, 392
Sau96I GGNCC 2 cut(s) 82, 118
SetI ASST 6 cut(s) 61, 84, 92, 114, 162, 215
SfaNI GCATC 2 cut(s) 121, 246
SinI GGWCC 1 cut(s) 82
SmiMI CAYNNNNRTG 1 cut(s) 173
SmlI CTYRAG 1 cut(s) 292
SmoI CTYRAG 1 cut(s) 292
SpeI ACTAGT 1 cut(s) 301
Sse9I AATT 2 cut(s) 27, 376
SsiI CCGC 3 cut(s) 121, 184, 387
SspI AATATT 1 cut(s) 238
SspMI CTAG 1 cut(s) 302
StyI CCWWGG 1 cut(s) 229
TaaI ACNGT 2 cut(s) 17, 172
TaqI TCGA 1 cut(s) 273
TasI AATT 2 cut(s) 27, 376
TauI GCSGC 2 cut(s) 123, 187
TfiI GAWTC 1 cut(s) 138
TscAI CASTG 2 cut(s) 148, 177
TseI GCWGC 3 cut(s) 165, 356, 391
TspDTI ATGAA 1 cut(s) 210
TspRI CASTG 2 cut(s) 148, 177
VpaK11BI GGWCC 1 cut(s) 82
XceI RCATGY 1 cut(s) 248
XcmI CCANNNNNNNNNTGG 1 cut(s) 33
XspI CTAG 1 cut(s) 302
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.