Seed dormancy control
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G18650 |
| fragaria_vesca | FvH4_3g07650 |
| malus_domestica | MD05G1073300.v1.1 MD05G1299100.v1.1 MD10G1044600.v1.1 MD14G1136000.v1.1 |
| prunus_persica | Prupe.4G062700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0011031 |
| rosa_laevigata | RLG00000031804 |
| rosa_multiflora | Rmu_sc0003242.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00065370 |
| rosa_rugosa | Rorug04G0454700 |
| rosa_samantha | Rh5BG081600 Rh5DG081400 |
| rosa_wichuraiana | Rw0G000130 Rw0G017820 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 37 |
| Acc36I | ACCTGC | 1 cut(s) | 37 |
| AciI | CCGC | 4 cut(s) | 59, 163, 191, 194 |
| AfaI | GTAC | 1 cut(s) | 8 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 102 |
| AgsI | TTSAA | 1 cut(s) | 220 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 212, 244 |
| AluBI | AGCT | 1 cut(s) | 127 |
| AluI | AGCT | 1 cut(s) | 127 |
| Ama87I | CYCGRG | 1 cut(s) | 96 |
| ApeKI | GCWGC | 2 cut(s) | 43, 269 |
| AsuHPI | GGTGA | 3 cut(s) | 151, 169, 193 |
| AvaI | CYCGRG | 1 cut(s) | 96 |
| BbvI | GCAGC | 2 cut(s) | 55, 256 |
| BccI | CCATC | 3 cut(s) | 49, 64, 130 |
| BfuAI | ACCTGC | 1 cut(s) | 37 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 89 |
| BisI | GCNGC | 3 cut(s) | 44, 192, 270 |
| BlsI | GCNGC | 3 cut(s) | 45, 193, 271 |
| BmeT110I | CYCGRG | 1 cut(s) | 96 |
| BmsI | GCATC | 1 cut(s) | 150 |
| BpuEI | CTTGAG | 1 cut(s) | 194 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 102 |
| Bse1I | ACTGG | 1 cut(s) | 93 |
| Bse3DI | GCAATG | 1 cut(s) | 245 |
| BseGI | GGATG | 2 cut(s) | 75, 141 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 102 |
| BseMI | GCAATG | 1 cut(s) | 245 |
| BseMII | CTCAG | 1 cut(s) | 230 |
| BseNI | ACTGG | 1 cut(s) | 93 |
| BseXI | GCAGC | 2 cut(s) | 55, 256 |
| BsgI | GTGCAG | 1 cut(s) | 305 |
| BsiHKCI | CYCGRG | 1 cut(s) | 96 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 102 |
| BsoBI | CYCGRG | 1 cut(s) | 96 |
| BspACI | CCGC | 4 cut(s) | 59, 163, 191, 194 |
| BspCNI | CTCAG | 1 cut(s) | 231 |
| BspMI | ACCTGC | 1 cut(s) | 37 |
| BsrDI | GCAATG | 1 cut(s) | 245 |
| BsrI | ACTGG | 1 cut(s) | 93 |
| Bst4CI | ACNGT | 2 cut(s) | 121, 335 |
| BstDEI | CTNAG | 1 cut(s) | 239 |
| BstF5I | GGATG | 2 cut(s) | 75, 141 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 89, 98 |
| BstV1I | GCAGC | 2 cut(s) | 55, 256 |
| BtgZI | GCGATG | 2 cut(s) | 68, 164 |
| BtsCI | GGATG | 2 cut(s) | 75, 141 |
| BveI | ACCTGC | 1 cut(s) | 37 |
| Csp6I | GTAC | 1 cut(s) | 7 |
| CviAII | CATG | 1 cut(s) | 280 |
| CviJI | RGCY | 4 cut(s) | 83, 127, 208, 269 |
| CviKI_1 | RGCY | 4 cut(s) | 83, 127, 208, 269 |
| CviQI | GTAC | 1 cut(s) | 7 |
| DdeI | CTNAG | 1 cut(s) | 239 |
| EciI | GGCGGA | 2 cut(s) | 74, 209 |
| Eco88I | CYCGRG | 1 cut(s) | 96 |
| FaeI | CATG | 1 cut(s) | 283 |
| FaiI | YATR | 1 cut(s) | 281 |
| FatI | CATG | 1 cut(s) | 279 |
| Fnu4HI | GCNGC | 3 cut(s) | 44, 192, 270 |
| FokI | GGATG | 2 cut(s) | 82, 148 |
| Fsp4HI | GCNGC | 3 cut(s) | 44, 192, 270 |
| GluI | GCNGC | 3 cut(s) | 44, 192, 270 |
| Hin1II | CATG | 1 cut(s) | 283 |
| HinfI | GANTC | 1 cut(s) | 241 |
| HphI | GGTGA | 3 cut(s) | 151, 169, 193 |
| Hpy188III | TCNNGA | 1 cut(s) | 211 |
| Hpy99I | CGWCG | 1 cut(s) | 121 |
| HpyAV | CCTTC | 4 cut(s) | 125, 148, 181, 214 |
| HpyCH4III | ACNGT | 2 cut(s) | 121, 335 |
| HpyCH4V | TGCA | 2 cut(s) | 250, 286 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 89, 98 |
| HpyF3I | CTNAG | 1 cut(s) | 239 |
| Hsp92II | CATG | 1 cut(s) | 283 |
| LmnI | GCTCC | 1 cut(s) | 124 |
| LpnPI | CCDG | 4 cut(s) | 32, 49, 74, 113 |
| Lsp1109I | GCAGC | 2 cut(s) | 55, 256 |
| LweI | GCATC | 1 cut(s) | 150 |
| MaeIII | GTNAC | 1 cut(s) | 319 |
| MboII | GAAGA | 2 cut(s) | 26, 324 |
| MluCI | AATT | 1 cut(s) | 77 |
| MlyI | GAGTC | 1 cut(s) | 250 |
| MmeI | TCCRAC | 1 cut(s) | 210 |
| MnlI | CCTC | 8 cut(s) | 4, 33, 60, 96, 169, 198, 291, 302 |
| MseI | TTAA | 2 cut(s) | 291, 343 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 89, 98 |
| NlaIII | CATG | 1 cut(s) | 283 |
| NmuCI | GTSAC | 1 cut(s) | 319 |
| PaqCI | CACCTGC | 1 cut(s) | 37 |
| PkrI | GCNGC | 3 cut(s) | 45, 193, 271 |
| PleI | GAGTC | 1 cut(s) | 249 |
| PpsI | GAGTC | 1 cut(s) | 249 |
| RsaI | GTAC | 1 cut(s) | 8 |
| RsaNI | GTAC | 1 cut(s) | 7 |
| SaqAI | TTAA | 2 cut(s) | 291, 343 |
| SatI | GCNGC | 3 cut(s) | 44, 192, 270 |
| SchI | GAGTC | 1 cut(s) | 250 |
| SetI | ASST | 5 cut(s) | 8, 24, 51, 129, 159 |
| SfaNI | GCATC | 1 cut(s) | 150 |
| SmlI | CTYRAG | 1 cut(s) | 209 |
| SmoI | CTYRAG | 1 cut(s) | 209 |
| Sse9I | AATT | 1 cut(s) | 77 |
| SsiI | CCGC | 4 cut(s) | 59, 163, 191, 194 |
| TaaI | ACNGT | 2 cut(s) | 121, 335 |
| TasI | AATT | 1 cut(s) | 77 |
| TauI | GCSGC | 1 cut(s) | 194 |
| Tru1I | TTAA | 2 cut(s) | 291, 343 |
| Tru9I | TTAA | 2 cut(s) | 291, 343 |
| TseFI | GTSAC | 1 cut(s) | 319 |
| TseI | GCWGC | 2 cut(s) | 43, 269 |
| Tsp45I | GTSAC | 1 cut(s) | 319 |
| TspDTI | ATGAA | 3 cut(s) | 167, 200, 268 |