Rorug04G0454700

Seed dormancy control

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0015490
Physical Location & Seq
Forward (+)
60859944 .. 60878157
18214 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0454700.1

Sequence Viewer

Length: 15270 bp
ATGTTTAGCGTGCTACTCGTGGTTTCACTGCAGTTTCTACATGTCCTTTGTGCAATATGGCTGATGAAACCCTCCTTCATCTATTCAGAGGTTGCCCCAGATCCATGGCCATCTGGAAATGCTTTATTAAACCTGAGCCTCATCAGTCTGTGCTGGAAGAAACCTCCAGAAAACTTTTACAAGCTAAATGTGGATGGCACTCGAAGTTCTGCTTCTGGTAAGATTGGGGTTGGTGGAGTCATCAGAGACCACACTGGAAATTGGGTGATTGGCTTCCAAATCAACTTAGGGGTTGGTGAGATTTTGGAGGTTGAAGCCTGGGGACTTTTTTGTGGTTTAAAGTTAGCCTCAAGCCTGCACATCCCCAAGCTAGAAATTGAATCTGATTCTGCTGTTCTTGTTCAGCTTGTGCAGCAGCAAAACCTTTCTACTCACCCCCTTGGATCTCTGCTTGCTGGATGCAACAACTTTATGGCCACTATGCAGAATGTCCAGCTTATGCACATCTTTCGTGAGTGTAATATGACTGCGGATGCTTTGGCTAGATGCAGCATTGATCATGAGCCTGGTCTCATCACTTTTTTGGATCCTCCTATCCATGCTACTGAAGCCTTTCTTGATGATCTTGCTTTTGTAACTAGAACTAGGAGAAAAGAGGAGACAGAACTTTTTCTTTGTTTTTGTTTGGACCTTTTAGGTCCCGCTTGTAACAAAAAAAAAGAAAAAGATAATCCAATACAATTATTTACTTTTGCCCGTAAATTATCTCTTGTGCGAGAAAATAGTAAAATCCCTGGCCCCTTTGCCCCCTTTGGTCGATTAATCCCAATTTCATCAAAATTCACTCTTCGCAGTTGGAACGCCACCGCCTTCACCTTGCTTCACTCTCAGGTTTCCTATAAATATTCCAAATTCCACAGGCGATGGTTTCTAAGTAAGAAGGCGAGAGAGCCTAAACCAACAATGGAGTCTCCGTCACCGGAGTCGATATTTCTAGAAGACTTCGGTCAAAAGGTTGACCTTACCAGGCGAATCCGGGAGGTTTTGCTCAACTACCCCGAGGGAACCACCGTACTCAAAGAGTTGATTCAGAATGCTGACGATGCCGGCGCCACCGTCGTTCGTCTCTGCCTAGACCGCCGCCTCCACGGTTCCGACTCCCTTCTATCGGAGACATTGGCGCCCTGGCAGGGGCCTTCGCTCTTGGCCTATAACGACGCCGTTTTCACTGAGGAGGATTTCGTTAGCATTTCGAGGATCGGAGGGAGCAGCAAGCACGGCCAGGCCTCGAAGACCGGCCGCTTCGGGGTTGGATTCAACTCAGTGTACCATTTAACTGATTTGCCGTCGTTTGTGAGTGGGAAATTTGTGGTGTTGTTTGATCCCCAAGGCATTTTCCTTCCAAAGGTTTCGGCTTCCAATCCCGGGAAGAGAATTGACTATGTTTCTTCTTCAGCCATTTCTGTATATAGAGACCAGTTCTTTCCTTACTGTGCTTTTGGCTGCGACATGAAAACGCCCTTTTCCGGGACTCTATTCCGGTTCCCTTTGAGGAATGCGGAGCAGGCGGCGACCAGTAAGCTTTCCAGGCAAGAATACTCCGAAGACGACCTCTCTTCCTTGTTGCTTCAACTGTATGAGGAAGGCGTTTTCACATTGCTTTTCCTCAAAAGTGTCTTGCGCATCGAAATGTATGTGTGGGACGCCCAGGACTCTGAGCCGAGGAAGCTTTATTCGTGCTCTGTCAGTTCTGCAAGTGATGATATTGTTCGGCATCGGCAGGCAGTGTTGAGATTTCCCAAGTCGGTAAATTCTACAGAGAGTCAGGTGGACTGCTATTCAGTGGACTTTGTAAGGGAGGCAATGATAGGGACCCAATCGCAGAAGAAGACAGATAGTTTTTATCTTGTACAAGCACTGGCATCCACATCCAGTAGGATTGGCAAATTTGCAGCTACTGCTTCTAAGGAATATGATATGCACTTGCTGCCGTGGGCATCAGTTGCTGCTTGCATCACAGATAATTCAGAACAGAATGATGCTCTTAGGCTAGGTCAGGCATTCTGTTTCCTTCCTCTGCCTGTAAGAACTGGTTTGAGTGTACAAGTGAATGGATACTTTGAGGTTTCATCGAATCGTCGTGGCATCTGGTATGGGGCTGATATGGACAGAAGTGGAAAAATTCGTTCTGTCTGGAACAGGCTTCTTCTAGAAGAGGTTGTGGCGCCTGCATTTACACAACTTCTTCTGGGCATACGAGGACTGCTAGATTCGAGGAAATTGTACTATTCCTTATGGCCAAGTGGTTCTTTTGAAGAGCCATGGAATATTCTTGTTGAGCATATATACAGAAACATTTCTAATGCTCCTGTGTTATATTCGGAACTTGAAGGTGGAAAATGGGTGGCACCTGTCGAAGCTTTTCTACATGATCAGGAAGTTACTAAGAGCAAGGAACTTGGTGAGGCCCTGATTGAGCTAGGAATGCCTATTGTGGGTTTGCCTAACAATTTATTTGACATGCTCTTGAAATATGCTTCCACTTATAGGCAGAAGGTGGTCACTCCTGATACAGTACGTTGTTTCCTCAGGGAGTGCAGATTTCTTTCTACTCTTGGTAAAGCTTACAAGCTTGTATTGTTGGAATATTGTCTTGAAGATTTGCTTGATGCTGATGTTGGGACACATGCTTATAATCTGCCTTTGCTTCCATTGGCAAATGGTGAATTTGGATTGTTATCAGAAGCCTCAAAAGGAATTTCCTATTTCATTTGCAGTGATTTAGAGTTCAGGCTGCTTCAACAAATATATGATAGAATAGTTGATCGGGATATTCCTATCAATCTACTACATAGACTCTCTGCTATTGCGAAGTCCTCAAAGGCAAACCTTGTTATTTTCAATGTTCAGTACTTTCTTCAATTTTATCCAAGATTTGTACCTGCTGACTGGAAGTATAAAAGCAAAGTGCTCTGGGACCCAGAGTCTTGTCATAATCACCCTACTTCTTCATGGTTTGTGCTATTCTGGCAATATCTTCGGAATCAATGCGATAAGTTGTCTATTTTTAGTGATTGGCCTATTTTGCCCTCTACTTCTGGCCATCTGTATAGAGCCTCTAGAGAGTCAAAATTGATGAATGCAGAAAAGCTTTCAGACAAGGTGCAAGGCGTACTCGTTAAAATTGGTTGCAAGATTCTGAACCCAAATTATGGAGTTGAACACTCAGATTTATTTCATTATGTAAGTGATGGTAATGCTACAGGCCTTGTCGAATCCATATATGATGTTGTCTCTTTGAATTGTGGCACCATAGCAACATGTTTTCATAGTCTGGAAGCGGAAGAGAGGGATGAGCTTCGTTCATTTCTTCTTGACCCGAAGTGGTATTTTGGAGCCTGTTTGAATGAGTCTGCCATACGTAATTGCAAGAGGCTGCCTATCTATAAAGTGTATGGTGGAGGATCTACTCAAAGTTTCCAATTCTCAGATCTTGAAAGTCCGCGAAAGTACTTACCACCGTTAGACATTCCTGAGTGCTTCCTTGGAACTGAGTTCCTTATTAGCTCAGATACTGAGCTGCAGATTCTGTTAAGATACTATGGTATTGAAAGGATGGGGAAGGCACTCTTCTACAAGCAGCAGGTTTTGAATAGAGTTGGGGAGCTGCAACCTGAGGTACGGAACAACATTGTTCTATCCATTCTACAAAACCTACCACAGCTGTGTGTTGAGGACACATCGTTCAGGGAATATTTGAGAAACTTGGAATTTCTCCCAACCCTGAGTGGTGCGCTTAGATGTCCTACTGCATTATATGATCCTCGTGATGAAGAATTATATGCACTATTAGATGATTCTGATAGTTTTCCCTACGGTCCATTCCAAGAGCCTGGTGTTTTGGACATGCTGCAAGGTTTGGGCCTTAGAACATCTGTGACCCCTGAGACGGTCATACAAAGTGCTCGACAGGTCGAACGATTAATGCATGAGGATCAGCAAAAGGCACATCTAAAAGGGAAGGTGCTTCTGTCATATTTAGAAGTTAATGCAATGAAATGGATACCCAATCTGTTAAATGGTGATCAAGGAACAGTGAACAGAATGTTCTCACGAGCTGCAACTGCATTCAGACCTCGTAACTTAAAATCTGATCTTGAGAAGTTCTGGAATGATCTTCGGCTGGTCTCTTGGTGCCCAGTTTTAGTTTCTGCTCCATTTCCAACTTTGCCGTGGCCTGTTGTGTCATCCACAGTTGCTCCTCCAAAGCTTGTGAGATTGCAAGCCGACATGTGGCTTGTTTCAGCTAGCATGCGAATTCTAGATGGAGAGTGCTCATCTACAGCGCTATCGTCTAGCCTTGGGTGGTCTTCTCCACCAGGTGGAAGTGTCATTGCAGCGCAACTACTGGAGCTTGGGAAAAACAATGAGATTGTGAATGATCAGGTTCTTCGGCAGGAGTTAGCTGTGGCTATGCCTAGGATATATTCAATACTGGCAGGTTTGATTGGTTCTGATGAGATGGACATAGTAAAGGCTGTCCTTGAGGGCAGCCGGTGGATTTGGGTGGGAGATGGATTTGCAACTGTAGATGAGGTTGTCCTTAATGGTCCCATTCATCTGGCTCCTTATATACGTGTTATACCTGTCGATCTAGCAGTTTTTAAGGAACTATTTTTGGAGCTTGGCATTCGAGAATTCCTGAAGCCTACAGACTATGCTAATATTTTGTGCAGAATGGCTTTGAAGAAAGGATCTTCTCCTCTCGACGCACAGGAAATCCGAGCAGCCTTATTGATTGTCCAGCATCTAGCTGAAGTTCAGATACATGACCAGAAAGTTAAAATTTATTTACCAGATGTATCAGGCAGATTATATCCTGCTGGTGACTTAGTTTATAATGATGCCCCTTGGTTGCTTGGGTCAGAGGATCATGATAGCCCTTTTGGTGGTTCATCTAATATGCCACTTAATGCAAGGAGAACAGTTCAAAAATTTGTGCATGGGAACATATCTATTGATGTTGCAGAGAAGCTTGGTGTCTGCTCTCTTCGTAGGATATTGCTGGCTGAGAGTGCCGATTCAATGAATCTGAGTTTATCTGGTGCTGCTGAAGCTTTTGGACAGCACGAAGCACTGACAACTAGACTTAAACACATACTTGAAATGTATGCAGATGGACCTGGAATTCTGTTTGAGCTGGTTCAAAATGCAGAGGATGCTGGAGCTTCTGAGGTGAACTTTCTCCTGGACAAAACTCAATATGGGACTTCTTCAGTACTTTCACCTGAAATGGCAGATTGGCAAGGCCCTGCGTTGTACTGTTTCAATGACTCTGTCTTCAGTCCCCAAGATCTGTATGCAATCTCACGCATTGGCCAGGAGAGCAAGCTAGAAAAACCTTTTGCTATAGGGAGATTTGGACTGGGTTTTAATTGTGTCTACCATTTTACAGACATTCCCACATTTGTTTCTGGCGAAAACATTGTTATGTTTGATCCTCATGCCTGTAATCTACCTGGGATCTCTCCCTCTCACCCTGGCTTAAGGATAAAATTTTCTGGAAGAAAGATTATGGAACAATTTCCTGATCAGTTTTCTCCTTTTTTACACTTTGGCTGTGACTTGCAGCGTCCATTTCCTGGAACTCTTTTCCGGTTTCCTCTTAGGAGTGCTAGTGCTGCTTCCCGAAGCCAAATAAAGAAAGAAGGATATGCACCTGAAGATGTCATGTCCCTTTTTTCTTCCTTTGCAAAAGTTGTTTCTGAGACGTTACTTTTTCTGCGTAATGTGAAAGTCATCTCTGTTTTTGTAAAGGAAGGAAGTGGACATGAAATGCAACTTTTACATCGGGTCAACAAGCATTGCAATAGTGAGCCTGAAATGGAATCCAATGCACGACAGGATGTGTTTAGTCTTTTTGATGGTAATCGGCATAATGGAATGGATAAAGAGCAATTTCTAAAGAAATTGAGAAAATCAGCGGATAAAGATTTGCCATACAAGTGTCAGAAGGTTATAATTACAGAGGAAAGCTCATCTGGTAATGTATCACACAGCTGGATAACCTCTGAGTGTATAGGTGGTGGACAGGCAAAGAAGAAATTCCCAGTTTTTAGTGACAAGTCTCATACTTATTTCCCCTGGGCATGTGTTGCTGCATATTTATACTCTTCCAAGGTTGGTTTGCAAACAAGTGATATCTCGGAGAACAACGAGACCTGTGCTGTTACTTCCAATTTATTTCAAGTCCCTCCAGGCCCCTCTGAAGATAGAAAAGATCTTGAGGGCCGTGCTTTCTGTTTTCTACCACTGCCAATTACTACTGGTCTTCCAGCACATGTTAATGCTTATTTCGAGTTATCGTCAAATAGGAGGGACATCTGGTTTGGTAATGACATGGCTGGTGGTGGAAAGAAGCGCTCAGATTGGAATATGTACTTGCTTGAAGGAGTAGTTGCCCCTGCTTATGGGCATATGCTAGAGAAAATTGCACCTGAAATTGGCCCATGTGAGTTGTTCTTTTCACTTTGGCCTAAAACAAGAGGATTGGAACCTTGGGCTTTAGTGGTGCAGGAACTTTATATGTTTATTGCTGATTGTGGCCTTCGTGTATTATATACAAAAGCTCGAGGAGGCCAGTGGATCTCAACCAAACAAGCTATATTTCCTGACTTTACTTTCGACAAGGTTGATGAGCTTATTGAAGCATTATCAGATGCTGGTCTACCTCTGGTCACTGTTTCCAAGCCAATTGTTGAGAGGTTTATGGATGTGTGCCCTGCCTTGCATTTTTTGACACCAGAGTTGTTGAAGACTTTGTTAATTCGAAGGAAACGGGAATTTAAGGATAGAAACACAATGGTATTGGCCCTTGAATATTGTTTACTTGACTTGAAGATGCCTGTTCAATCTGCTGGTTTGTATGGTTTGCCTTTATTACCCCTTGCTGATGGTTCATTTACCATAATCGACAAAAAGGGGATTGGGGAAAGAATATATATCGCACGAGGGGATGAGTATGATCTTCTCAAGGATTCGGTTCCAAATCTACTTGTAGATTGCACAATTCCTGGAGGAGTTTATGAGAAGCTGTGTTACATAGCCCAAAGCGAGGCCTCCAATATTTCTTTTCTGTCATGTCGTTTACTGGAGAAACTCTTTTTAAGAATACTTCCTGCAGAGTGGCATCATGCAAAACAGGTGACATGGGCTCCTGGTCAGCAAGGTCAACCGAGTGTAGAGTGGGTAAGACTTCTCTGGAGCTATTTGAGGTCATCTTGTGATGACTTGTCACTTTTTTCTAAATGGCCAATATTGCCTGTTGGTAACAATTGTCTCTTGCAACTAGTTGACAATTCAAACATAATAAAGGATGATGGGTGGAGTGAGAAGATGACAGCTTTGTTGCTGAAAATAGGATGCGTTTTCCTGAGGCACGACCTTGCAGTAGATCATCCCCAGTTGAAAAGATTTGTGCAGTTGCCAACAGCAATTGGCTTATTGAATGCGTTTCTGGCAGTTGCAGGTAAGCCAGAGAACATTGAGGGCCTTTTTAACGATGCAACAGAAGGAGAGATGCATGAACTTCGGAGTTTCATTCTTCAGTCCAAGTGGTTTATCGAAGAGAAAATGGAAGATAAGCATATTGACATCATGAAACACCTTCCTATGTTTGAGTCATATAAGAGCAGAAAGTTTGTAAGTTTGAGTAATCCTGTCAAATTGCTTAAACCTGGTGATATTCAGGAGGATTTTCTGAGTGATGACTTTGTACGCACGGAATCAGAGAAAGAAAAAATTATTTTGAGAAGATATTTAGAGATTGAAGAACCCTCCAGGATGGAATTCTACAGAGATCATTTGCTTAACCGTATGTCAAAATTCCTATCAGAGCAAGGATCTCTTACAGCCATTCTCCATGGAGTGCAGGTTTTAGTTGAAGAGGATAATTCTTTGAAATCTGCAATTTCTGAAATACCTTTCGTTTTGGCTGCTGATGGATCTTGGCAGAAGCCTTCCCGGCTCTATGATCCTAGAGTCACTGCTTTAAGAAAGGTGCTACATGGAGAAGTTTTTTTCCCTTCTGACAAGTTCTCAGATACTGAAACTCTGGATATATTGAATACACTTGGTCTCAGAAAAACTCTGGGCTATTCTGGTTTAATTGATTGTGCTAGATCAGTTTCATTGCTGCATTTTTCAAGGGATTCAGAGACACTAAGTTATGGGAGAAAGTTACTTGTTTGTTTAGATGCTCTATCATGTAAGCTCTCGACTGAGGAAGAAGGAAATCTTGATGAGTCAACGAATTCTGTTTTCCAAAACGACACTAGAACCGAAGATGGTGATGTTGTGTACATTGAGTCTCCCAAGAGCAATGAGAACATAAAAATTGATGATCTGGAGATAAATTCTTTTGTTGACGACTTGATTGGTGATAAACCAGAAGAGGACTTTTGGTCTGAAATGAGGGCTATTGCTTGGTGTCCTGTATGTGTTGATCCACCTCTCAAAGGAATCCCATGGTTGAAATCCAGTAACCAGGTGGCATCCCCGAGCAATGTGAGACCTAAATCCCAGATGTTTATGGTTTCCTACTCGATGCATATACTAGATGGTGTATGCCGCTCAACATACCTACAAAAAAAGCTTGGCTGGATGGATCCACCGAACATAAATGTTTTGTCCACGCAGTTGATTGAGCTACCTAAGCTGTATTTTCAGCTTAAATCACATTCAGCTGATATCCAAGATGTCGATGCTGCACTTTGTGAGGGAATTCCATCACTCTATTCAAAATTGCAAGAATATATTGGCACTGATGAATTTTCGGACCTAGAATTAGCATTACATGGTGTTTCCTGGGTTTGGATCGGGGATAACTTTGTAGCTCCAAATGCACTTGCATTTGATTCGCCTGTGAAATTTACTCCATACTTGTATGTTGTCCCATCTGAATTATCAGAATTCAGAGATTTGCTGATAAAGTTAGGCGTACGAATTAGTTTTGATATATGGGACTATTTGCATGTCTTGCAACGCTTGCAGAATGATGTGAAAGGATTCCCACTGTCAACAGATCAGTTAAATTTTGCGCATTGTGTCCTTGATGCTGTAGCAGACTGTTGCTCAGAGAAACCACCATTTGAAGCTTCTAACACTCCAATGTTAATTCCAGATTTTTCTGGAGTTCTGATGGATGCTGGCGATCTTGTGTATAATGATGCACCATGGATGGAACACAGTACTCTTGTGGGGAAACATTTTGTACATCCAACTATCAGCAATGATCTGGCAAATAGATTGGGGGTACAGTCACTTCGTAGCCTCTCTTTAGTTGATGATGAAATGACTAAAGATATTCCGTGCATGGACTATGCTAGAATAAAAGAGCTTTTAGCTTCATATGGGGACAATGACTTGTTATTGTTTGACCTGCTTGAGTTGGCAGATTGTTGCAAAGCTAATAAGTTGCACCTAATCTTTGACAAGCGGGAACATCCTCGGCAGTCTTTGCTGCAGCACAATATGGGGGAATTTCAAGGGCCGGCCTTATTAGCCATATTGGAAGGAGCGAACTTGAGTAGAGAGGAAGTAAGTAGTCTCCAATTTTTACCTCCATGGAGACTAAGGGGTGCTACTGTGAACTATGGTTTGGCTTTGCTTAGCTGCTATTTTGTCTGTGATCTTCTCTCTGTTGTTTCTGGTGGCTACTTTTATATGTTTGATCCCCGTGGTTCAGTGCTTGCTGCACCTTCAAGTTGTACTCCTGCGGCTAAAATGTTTTCTCTGACAGGTACAAATTTAACTGATCGGTTTCGTGATCAATTCAATCCTATGCTGATTGGCCACAGTATGCCATGGCCATCATCGGATTCTACTATTATTCGCATGCCTCTATCATCTGAATGTTTGATTAATGAACTTGAGTTTGGATTAAGAAAAATAAAGCAGATTACTGAGAGATTTTTGGAGCACTCTTCTAGATCACTTTTATTCTTGAAGTCAGTAATGCAGGTGTCGATCTCCACATGGGAGGAAGGAAGTGCACAGCCATGTCAGGACTATTCAGTTAGCATTGATTCATCATCTGCTATCATGAGGAATCCATTTTCGGAAAAGAAATGGAGGAAGTTCCAAATATCCCGATTATTTAATAGCTTCAATGCTGCAACAAAATTGCAAGTAATAGATGTGAACTTGAACCAAGGCAAAGCAAGAGTTGTTGATCGATGGCTTGTTGCACTTAGCCTGGGATCTGGGCAAACAAGAAATATGGCTCTTGATAGGCGTTATCTGGCATACAACTTGACACCTGTCGCTGGAGTTGCAGCACATATATCCCGAGATGGCTATCCTGTTGATGTTTGTCTAACGAGTTCTATCATGTCCCCTCTTCCTTTGTCTGGAGGTATAAATATACCTGTTACTGTTCTTGGATGCTTCCTGGTTTGTCACAATGGAGGTCGCTCTCTCTTTAATTATCAAGACAAAGAAGCTTCTTCAGCAGAGGCACGTGTGGATGCTGGAAATCTGTTAATGGAAGCTTGGAACAAAGAGCTGATGTCATGTGTTCGTGATTCCTACGTCGAATTGATATTGGAAATCCAGAGGTTAAGAATAGATCCTTCTAGTTCCGCAACTGAATCAAGTGCAGGTCTTGCAGTCAGCCTGTCTTTGAAGGGCTATGGAGATCAAATTTATTCCTTTTGGCCGAGGTCTAACAGGCATAATTTGGCCAAACAACCAGGAGATGGCAGTATACCTTCAATTGAAGTGCCTAAATCAGATTGGGAATGTGTAATTGAACAGGTGATAAGTCCTTTTTATGCTCGTATAGTTGATCTTCCTGTGTGGCAACTTTACTCAGGAAATTTTGCCAAGGCTGAAGAGGGTATGTTTCTTTCACAACCTGGACATGGGGTGGGTGGGAACTTACTTCCGGCTACAGTTTGCAGCTTTGTAAAGGAGCACTACCCAGTGTTTTCAGTACCTTGGGAGTTGGTGACCGAAATCCAAGCCCTGGGGATTACAGTTCGGGAAGTGAAACCAAAGATGGTTCGGAATCTGTTAAGAGCTTCTTCATCATCTATTGTTCTCCGATCAGTTGATATGTATGCAGATGTTCTTGAGTACTGCTTGTCTGATATTGAGATTGGAGATTCATTCAATTCAGCTGGAAATTCTCTGGCAGTTGACAACAGTAACACTAGAGGGGATAGCCAAGTTGTTGGTGGGAGTTCTGCTTCCCAGTCAGTTACTAATTTGCATACTTATCCAGCATCTTCTACACAGAATGCTACCAGTTCAGGAGATGCAATTGAGATGGTGACAAGTTTGGGCAAGGCTTTACTTGATTTTGGCCGGGGAGTTGTTGAGGATATTGGTAGGTCTGGGGGGCCCTTGGTTCAGAGGAACATGGTTGCAGGTAGTAGTAACAGCATCTATGGAAATGGAGACATGAATCTTCTATCGATAGCAGCTGAACTCAAAGGTTTGCCATGTCCAACTGCAGCAAACCGTTTAACTAAGTTGGGGTTTACTGAACTTTGGGTTGGGAATTCAGAGCAGCAGGCATTGATGGTTTCCTTGGCTGAAAAGTTTGTTCACCCTAAAGTATTGGATAGATCAATCCTCGCTGACATATTTTCAAATGGTGTGCTACAATCATTATTAAAACTGCGAAGTTTCTCTCTTCATTTACTGGCCAGTCATATGAAGTTCGTTTTTCAGGATAACTGGGCGAGTTATGTAATGGGCTCAATTATGGTTCCTTGGTTTTCATGGGAGAATAATAAATCAAGCTCTGGTGGTGAAGGTGGTCCTTCTCCTGAATGGATACGGCTCTTCTGGAAGAACTTCAACGGCTCTTCGGAAGATCTTTTGCTCTTTTATGATTGGCCTCTAATTCCTGCTTTTCTTGGTCGGCCAATCTTATGCCGTGTCAGGGAGCGTGACTTGGTCTTCATTCCACCCCTTCTTATTGATCCAACTTCAGAAGAAAATGCTTTGGAAACGAGTGCAACTGGAAGCAATCATATGCCTGAATCTGAATCAATTCAAGCATACATTTCAGCTTTTGAAGTAGCTAAAAACCAACACCCTTGGTTGTTATCACTTCTGAATCTCTGCAACATACCTATATTTGATATAGGTTTTTTACACTGTGCTGCCCCAAGCAACTGCTTCCCTCCCCCTGACCAATCATTAGGGCAAGTTATTGCTTCTAAGTTGGTTGCAGCTAAAAATGCTGGCTATTTCTCCGAAGTCACTTCCCTTTCAGCTTCAAATTGTGATGCACTTTTTGCACTTTTTGCTAATGATTTCTTGTCTAATGGCTCTAATTACAGAAGGGAAGAACTTGAAGTTTTGCGTTCACTTCCTATTTATAAAACAGTTGTGGGTTCTTACACACGATTGATCAGTGATGATCTGTGTATGATCTCCACAAATTCATTCCTTAAGCCCTATGATGAACGTTGTCTTTCCTATACCACTGATTCAGTTGAATTTGCATTACTTCGAGCACTTGGAGTCCCTGAATTGCATGATCAACAGATTTTAATTAGGTTTGGGTTGCCTGGGTTTGAAGGTAAGCCTGAACCTGAAAAGGAAGATATATTGATATATCTTTACACAAATTGGCAAGATCTCCAAATGGATACCGCTGTAGTTGAAGCTTTAAAGGAGACTAAATTTGTAAGGAATGCTGATGAGTTTTGCACAGATCTGTATAAGCCCAAGGATTTATTTGATCCTGGTGATGCTTTATTAACATCTGTTTTCTCTGGTGAGAGGAAAAAGTTTCCAGGAGAAAGGTTTTTTGCTGATCGGTGGCTTCGAATTTTAAGGAAAACTGGCCTACGAACTGCAATAGAATCTGATGTAATACTTGAATGTGCCAAAAGAGTGGAATTTCTTGGAAGTGAATGCATGAGATCCAGAGATTTGGATGATTTTGACGACCTAACCAACTCTCAGAGTGAAGTTTCCATGGAAGTATGGACGTTAGCTGGATCTGTTGTTGAAGCAATTTTCTCGAACTTTGCTGTCCTCTATGGCAACAACTTCTGTGATCTCCTTGGAAAGATTAAATGCATACCTGCTGAATTTGGCTTTCCAAATGTCGCTGGAAAAAAAGGTGGCAAGAGAGTGCTCACTTCATATAGTGAAGCTATTCTGCTAAGGGATTGGCCTCTGGCTTGGAGCTGTGCTCCCATTCTTTCGAGACAAAATGTTGTTCCTCCCGATTACTCTTGGGGATCCCTCCAGCTTAGGAGCCCTCCAGCTTTTCCTACAGTAATAAAGCACTTGCAGATTATTGGGAGAAATGGTGGTGAAGACACACTTGCTCATTGGCCGACTGTGTCTGGTATGATGACTGTTGATGAAGCTTCTTGTGAGGTGTTGAAGTACCTGGATAAGATTTGGAATTCTCTCTCTTCTTCAGATATAATGGACTTACAGAGAGTACCATTTATACCTGCTGCAAATGGTACACGCTTGGTGACTGCGAACCTGCTTTTTGCCCGCCTAACAATTAACTTATCCCCATTTGCGTTTGAACTTCCTACATCATATCTTCCCTTTTTGAAGATTTTAAAAGATTTGGGACTTCAGGACATGCTATCCATTGCCTCTGCAAGGGATCTTCTCTTGAATCTTCAGAAAACTTGTGGATATCAACGTCTAAATCCAAATGAACTCCGTGCTGTGCTAGAAATTTTGTATTTTATCTGTGAGGGGGTTACTGCAGATGACATGTCTAATGACCCCAATTGGACATCAGCAGCAATAGTCCCTGATGATAGCTGCAGACTAGTTCATGCGAAATCCTGTGTGTATATTGATTCCCATGGATCCCGATTTGTAAAGTGCATTGACCCGTCCAGGTTAAGATTTATTCACCCAGATCTTCCAGAGAGATTTTGTACTGTTCTGGGAATCAAGAAGCTGTCTGATGTAGTCATAGAGGAATTAGATCACGAGGAACATGTGGAAACTTTGGATCATATTGGATCAGTTCCAATTGTAGCCATTCGAGAGAAACTGTTGAGCAAGTCACTTCAGAGTGCTGTATGGACAGTTGTAAACAGCATGGCTAGTTACATTCCTGCAATTAAGCATTTAACTGTGGAAACCATACAAAACTTATTAGAATCTGTTGCGGAAAAGTTGCAGTTTGTTAAGTGCCTCCATACTCGCTTTTTGCTCCTCCCACATTCTGTAGACATTACCCATGCTGCTAAGGATTCCATCATTCCAGAGTGGGTCAATGGATCCATGCATCGGACACTTTACTTCATCAACCAGACTAACACCTGTATATTAGTTTCTGAACCACCACCTTATATTTCTGTTTTTGATGTTATTGCAATTGTTGTGAGTCTGGTCTTAGGGTCCCCTACTCCTTTACCTATTGGATCTTTATTCGTCTGTCCTGGAGGCTCTGAAACTGCAATCGTTGATCTTTTGAAACTTTGTTCTGACAAGCAAGAAATGGAAGCCACCAGTGGAAGCAATGGGTTGGTAGGTAAAGAACTGTTACCCCAAGATGTTCATCAAGTACAGTTTCATCCATTGAGACCCTTTTACGCTGGAGAGATAGTGGCATGGCGGTCTCAGAATGGAGAAAAGCTCAAATATGGTAGAGTTCCAGAGGATGTCCGGCCGTCAGCTGGCCAAGCATTGTATAGATTCAAGGTGGAGACTTCACTGGGTTTTATGCAACCTCTTCTATCTTCTCATGTCTTCTCGTTCAAAAGTGTAGCGATGGGAAGTGAGACTTTACCAGTGTCTATGGATGATGTTCATACAATGGATCACAGCAGAACTCGTATTGACATGCCAGAAACTTCTGGAAGTGGCAAATCAAGAGCTTCTCAGCCGCAAGCTGGCAAAGACCTGCAGTATGGCCGAGTATCACCTGCAGAACTGGTGCAAGCAGTACAAGAGATGCTCTCTGCTGCTGGGATTTATATGGATGTGGAGAAGCAGTCCCTACTGCAAAAAACATTAACGCTGCAAGAACAATTAAAAGAGTCCCAGACTTCACTTCTGCTTGAACAGGAAAAGGCTGATGTTGCAGCAAAAGAAGCTGATACAGCAAAAGCAGCATGGGTTTGCAGGGTCTGCTTGAGCGCTGAAGTTGACATAACAATCGTTCCTTGTGGTCATGTACTTTGCCGGAGGTGCTCTTCTGCCGTTTCCAGGTGTCCATTTTGTCGGCTCCAGGTTTCAAAAACTCTGAGAATTTTTCGGCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DOG1

Protein Analysis

5089

Amino Acids

568.93

Weight (kDa)

5.58

Isoelectric Point (pI)

45.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_3 PF13456 63 - 182 8.5e-24 Reverse transcriptase-like
SACS PF25794 339 - 578 5.6e-86 Sacsin domain
SACS PF25794 1710 - 1946 2.2e-77 Sacsin domain
SACS PF25794 3128 - 3357 4.1e-25 Sacsin domain
zf-C3HC4_3 PF13920 5043 - 5082 7.1e-09 Zinc finger, C3HC4 type (RING finger)
Prok-RING_4 PF14447 5043 - 5083 7e-06 Prokaryotic RING finger family 4
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015490)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G18650
fragaria_vesca FvH4_3g07650
malus_domestica MD05G1073300.v1.1 MD05G1299100.v1.1 MD10G1044600.v1.1 MD14G1136000.v1.1
prunus_persica Prupe.4G062700_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0011031
rosa_laevigata RLG00000031804
rosa_multiflora Rmu_sc0003242.1_g000003
rosa_roxburghii Rroxscaffold_1G00065370
rosa_rugosa Rorug04G0454700
rosa_samantha Rh5BG081600 Rh5DG081400
rosa_wichuraiana Rw0G000130 Rw0G017820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 2694, 4899, 6020, 12393
AarI CACCTGC 2 cut(s) 10009, 14938
Acc16I TGCGCA 2 cut(s) 1682, 9099
AccB1I GGYRCC 6 cut(s) 1109, 1180, 2224, 2407, 3308, 4194
AccB7I CCANNNNNTGG 5 cut(s) 3212, 4382, 5642, 10757, 11026
AccBSI CCGCTC 1 cut(s) 8631
AccI GTMKAC 4 cut(s) 5442, 6727, 10765, 14232
AccII CGCG 1 cut(s) 3505
AclI AACGTT 1 cut(s) 12481
AcvI CACGTG 1 cut(s) 10520
AcyI GRCGYC 5 cut(s) 1110, 1181, 1218, 1704, 2225
AdeI CACNNNGTG 2 cut(s) 4382, 8774
AfeI AGCGCT 3 cut(s) 4347, 6422, 15145
AflII CTTAAG 2 cut(s) 5545, 12464
AflIII ACRYGT 8 cut(s) 40, 3320, 4290, 4636, 6340, 10519, 13764, 13996
AhdI GACNNNNNGTC 2 cut(s) 2983, 8461
AhlI ACTAGT 2 cut(s) 7348, 13822
AjuI GAANNNNNNNTTGG 6 cut(s) 9641, 9673, 9918, 9950, 11541, 11573
AleI CACNNNNGTG 1 cut(s) 3724
AloI GAACNNNNNNTCC 2 cut(s) 3728, 3760
Alw44I GTGCAC 1 cut(s) 10050
AlwNI CAGNNNCTG 7 cut(s) 1958, 2006, 3575, 3589, 6722, 8105, 15135
Ama87I CYCGRG 5 cut(s) 1058, 1424, 6630, 8557, 10347
Aor51HI AGCGCT 3 cut(s) 4347, 6422, 15145
ApaI GGGCCC 1 cut(s) 11406
ApaLI GTGCAC 1 cut(s) 10050
ArsI GACNNNNNNTTYG 4 cut(s) 6371, 6403, 6665, 6697
AseI ATTAAT 3 cut(s) 821, 3983, 9921
AspA2I CCTAGG 1 cut(s) 4478
AsuC2I CCSGG 6 cut(s) 1037, 1425, 1426, 1528, 8023, 11369
AsuII TTCGAA 2 cut(s) 6829, 12844
AsuNHI GCTAGC 1 cut(s) 4307
AvaI CYCGRG 5 cut(s) 1058, 1424, 6630, 8557, 10347
AvrII CCTAGG 1 cut(s) 4478
AxyI CCTNAGG 3 cut(s) 2588, 3675, 7433
BaeGI GKGCMC 4 cut(s) 4199, 6782, 10054, 11406
BaeI ACNNNNGTAYC 4 cut(s) 3589, 3622, 12657, 12690
BamHI GGATCC 5 cut(s) 586, 8665, 13265, 13862, 14282
BanI GGYRCC 6 cut(s) 1109, 1180, 2224, 2407, 3308, 4194
BanII GRGCYC 4 cut(s) 7216, 11406, 11765, 13286
BarI GAAGNNNNNNTAC 8 cut(s) 2409, 2441, 4809, 4841, 7082, 7114, 9306, 9338
BauI CACGAG 5 cut(s) 17, 3825, 4113, 7008, 13988
BbrPI CACGTG 1 cut(s) 10520
BciVI GTATCC 4 cut(s) 2108, 4056, 11835, 12658
BclI TGATCA 8 cut(s) 556, 2431, 4084, 4441, 5590, 9826, 12423, 12553
BcnI CCSGG 6 cut(s) 1037, 1425, 1426, 1528, 8023, 11369
BcuI ACTAGT 2 cut(s) 7348, 13822
BfoI RGCGCY 6 cut(s) 1113, 1184, 2228, 4349, 6424, 15147
BfrI CTTAAG 2 cut(s) 5545, 12464
BfuI GTATCC 4 cut(s) 2108, 4056, 11835, 12658
BglI GCCNNNNNGGC 1 cut(s) 8023
BglII AGATCT 7 cut(s) 3490, 5353, 6280, 11881, 12652, 12730, 13915
BlnI CCTAGG 1 cut(s) 4478
BlpI GCTNAGC 1 cut(s) 9668
BmcAI AGTACT 5 cut(s) 2912, 3512, 5280, 9250, 11138
BmeRI GACNNNNNGTC 2 cut(s) 2983, 8461
BmeT110I CYCGRG 5 cut(s) 1058, 1424, 6630, 8557, 10347
BmrI ACTGGG 8 cut(s) 4193, 5435, 6104, 7456, 10976, 11248, 11752, 14729
BmtI GCTAGC 1 cut(s) 4311
BmuI ACTGGG 8 cut(s) 4193, 5435, 6104, 7456, 10976, 11248, 11752, 14729
BoxI GACNNNNGTC 2 cut(s) 1005, 10319
BplI GAGNNNNNCTC 8 cut(s) 6020, 6052, 13201, 13233, 14625, 14657, 14948, 14980
Bpu10I CCTNAGC 5 cut(s) 134, 8712, 13187, 13277, 14250
Bpu1102I GCTNAGC 1 cut(s) 9668
Bpu14I TTCGAA 2 cut(s) 6829, 12844
BpuMI CCSGG 6 cut(s) 1037, 1425, 1426, 1528, 8023, 11369
Bsa29I ATCGAT 2 cut(s) 10234, 11477
BsaAI YACGTR 3 cut(s) 3422, 4637, 10520
BsaBI GATNNNNATC 4 cut(s) 2737, 5928, 10356, 14562
BsaHI GRCGYC 5 cut(s) 1110, 1181, 1218, 1704, 2225
BsaI GGTCTC 9 cut(s) 240, 575, 1467, 4192, 6212, 8141, 8563, 14581, 14628
BsaWI WCCGGW 3 cut(s) 979, 1539, 5655
Bse118I RCCGGY 4 cut(s) 1106, 1295, 4554, 9550
Bse21I CCTNAGG 3 cut(s) 2588, 3675, 7433
Bse8I GATNNNNATC 4 cut(s) 2737, 5928, 10356, 14562
BseCI ATCGAT 2 cut(s) 10234, 11477
BseJI GATNNNNATC 4 cut(s) 2737, 5928, 10356, 14562
BseRI GAGGAG 7 cut(s) 671, 1247, 4251, 4752, 6648, 7092, 14207
BseSI GKGCMC 4 cut(s) 4199, 6782, 10054, 11406
BseX3I CGGCCG 2 cut(s) 1297, 14672
BseYI CCCAGC 1 cut(s) 14972
Bsh1236I CGCG 1 cut(s) 3505
Bsh1285I CGRYCG 2 cut(s) 1300, 14675
BshNI GGYRCC 6 cut(s) 1109, 1180, 2224, 2407, 3308, 4194
BshVI ATCGAT 2 cut(s) 10234, 11477
BsiEI CGRYCG 2 cut(s) 1300, 14675
BsiHKCI CYCGRG 5 cut(s) 1058, 1424, 6630, 8557, 10347
BsiWI CGTACG 1 cut(s) 8998
BsmBI CGTCTC 3 cut(s) 1130, 3941, 5762
Bso31I GGTCTC 9 cut(s) 240, 575, 1467, 4192, 6212, 8141, 8563, 14581, 14628
BsoBI CYCGRG 5 cut(s) 1058, 1424, 6630, 8557, 10347
Bsp119I TTCGAA 2 cut(s) 6829, 12844
Bsp120I GGGCCC 1 cut(s) 11402
Bsp1407I TGTACA 4 cut(s) 1909, 2101, 8358, 9271
Bsp1720I GCTNAGC 1 cut(s) 9668
Bsp19I CCATGG 9 cut(s) 104, 2321, 7921, 8525, 9233, 9623, 9863, 12996, 13858
BspDI ATCGAT 2 cut(s) 10234, 11477
BspFNI CGCG 1 cut(s) 3505
BspHI TCATGA 4 cut(s) 559, 4933, 7656, 10101
BspMAI CTGCAG 9 cut(s) 33, 3585, 7183, 9525, 11518, 13759, 13820, 14913, 14935
BspOI GCTAGC 1 cut(s) 4311
BspQI GCTCTTC 4 cut(s) 2310, 11855, 11878, 15205
BspT104I TTCGAA 2 cut(s) 6829, 12844
BspT107I GGYRCC 6 cut(s) 1109, 1180, 2224, 2407, 3308, 4194
BspTI CTTAAG 2 cut(s) 5545, 12464
BspTNI GGTCTC 9 cut(s) 240, 575, 1467, 4192, 6212, 8141, 8563, 14581, 14628
BsrBI CCGCTC 1 cut(s) 8631
BsrFI RCCGGY 4 cut(s) 1106, 1295, 4554, 9550
BsrGI TGTACA 4 cut(s) 1909, 2101, 8358, 9271
BssAI RCCGGY 4 cut(s) 1106, 1295, 4554, 9550
BssNAI GTATAC 1 cut(s) 10766
BssNI GRCGYC 5 cut(s) 1110, 1181, 1218, 1704, 2225
BssSI CACGAG 5 cut(s) 17, 3825, 4113, 7008, 13988
Bst1107I GTATAC 1 cut(s) 10766
Bst2BI CACGAG 5 cut(s) 17, 3825, 4113, 7008, 13988
BstACI GRCGYC 5 cut(s) 1110, 1181, 1218, 1704, 2225
BstAFI CTTAAG 2 cut(s) 5545, 12464
BstAUI TGTACA 4 cut(s) 1909, 2101, 8358, 9271
BstBAI YACGTR 3 cut(s) 3422, 4637, 10520
BstBI TTCGAA 2 cut(s) 6829, 12844
BstEII GGTNACC 1 cut(s) 11008
BstENI CCTNNNNNAGG 3 cut(s) 1403, 8514, 13645
BstFNI CGCG 1 cut(s) 3505
BstH2I RGCGCY 6 cut(s) 1113, 1184, 2228, 4349, 6424, 15147
BstMCI CGRYCG 2 cut(s) 1300, 14675
BstPAI GACNNNNGTC 2 cut(s) 1005, 10319
BstPI GGTNACC 1 cut(s) 11008
BstSLI GKGCMC 4 cut(s) 4199, 6782, 10054, 11406
BstSNI TACGTA 1 cut(s) 3422
BstUI CGCG 1 cut(s) 3505
BstXI CCANNNNNNTGG 6 cut(s) 105, 3893, 4621, 11234, 12913, 12952
BstZ17I GTATAC 1 cut(s) 10766
BstZI CGGCCG 2 cut(s) 1297, 14672
Bsu15I ATCGAT 2 cut(s) 10234, 11477
Bsu36I CCTNAGG 3 cut(s) 2588, 3675, 7433
BsuI GTATCC 4 cut(s) 2108, 4056, 11835, 12658
BsuTUI ATCGAT 2 cut(s) 10234, 11477
BtgZI GCGATG 2 cut(s) 937, 14789
BtsI GCAGTG 5 cut(s) 26, 1791, 2782, 6311, 8043
CaiI CAGNNNCTG 7 cut(s) 1958, 2006, 3575, 3589, 6722, 8105, 15135
CciI TCATGA 4 cut(s) 559, 4933, 7656, 10101
Cfr10I RCCGGY 4 cut(s) 1106, 1295, 4554, 9550
Cfr9I CCCGGG 1 cut(s) 1424
ClaI ATCGAT 2 cut(s) 10234, 11477
CseI GACGC 4 cut(s) 1226, 1712, 4778, 5621
CsiI ACCWGGT 3 cut(s) 4378, 7735, 8544
DinI GGCGCC 3 cut(s) 1111, 1182, 2226
DraI TTTAAA 3 cut(s) 339, 12687, 13605
DraIII CACNNNGTG 2 cut(s) 4382, 8774
DriI GACNNNNNGTC 2 cut(s) 2983, 8461
EagI CGGCCG 2 cut(s) 1297, 14672
Eam1105I GACNNNNNGTC 2 cut(s) 2983, 8461
EclXI CGGCCG 2 cut(s) 1297, 14672
Eco105I TACGTA 1 cut(s) 3422
Eco147I AGGCCT 3 cut(s) 1286, 3267, 7118
Eco24I GRGCYC 4 cut(s) 7216, 11406, 11765, 13286
Eco31I GGTCTC 9 cut(s) 240, 575, 1467, 4192, 6212, 8141, 8563, 14581, 14628
Eco32I GATATC 3 cut(s) 6202, 8749, 13685
Eco47III AGCGCT 3 cut(s) 4347, 6422, 15145
Eco52I CGGCCG 2 cut(s) 1297, 14672
Eco72I CACGTG 1 cut(s) 10520
Eco81I CCTNAGG 3 cut(s) 2588, 3675, 7433
Eco88I CYCGRG 5 cut(s) 1058, 1424, 6630, 8557, 10347
Eco91I GGTNACC 1 cut(s) 11008
EcoNI CCTNNNNNAGG 3 cut(s) 1403, 8514, 13645
EcoO65I GGTNACC 1 cut(s) 11008
EcoRI GAATTC 9 cut(s) 4317, 4697, 5187, 7847, 8311, 8781, 8969, 11563, 13435
EcoRV GATATC 3 cut(s) 6202, 8749, 13685
EcoT22I ATGCAT 6 cut(s) 3990, 7584, 8610, 12938, 13103, 14292
EcoT38I GRGCYC 4 cut(s) 7216, 11406, 11765, 13286
EgeI GGCGCC 3 cut(s) 1111, 1182, 2226
EheI GGCGCC 3 cut(s) 1111, 1182, 2226
Esp3I CGTCTC 3 cut(s) 1130, 3941, 5762
FauI CCCGC 3 cut(s) 709, 9489, 13541
FauNDI CATATG 4 cut(s) 6477, 9409, 11718, 12042
FbaI TGATCA 8 cut(s) 556, 2431, 4084, 4441, 5590, 9826, 12423, 12553
FblI GTMKAC 4 cut(s) 5442, 6727, 10765, 14232
FriOI GRGCYC 4 cut(s) 7216, 11406, 11765, 13286
FseI GGCCGGCC 1 cut(s) 9554
FspI TGCGCA 2 cut(s) 1682, 9099
GsaI CCCAGC 1 cut(s) 14976
HaeII RGCGCY 6 cut(s) 1113, 1184, 2228, 4349, 6424, 15147
HgaI GACGC 4 cut(s) 1226, 1712, 4778, 5621
Hin1I GRCGYC 5 cut(s) 1110, 1181, 1218, 1704, 2225
HincII GTYRAC 9 cut(s) 1018, 5857, 7232, 7354, 8307, 8425, 9078, 11200, 15154
HindII GTYRAC 9 cut(s) 1018, 5857, 7232, 7354, 8307, 8425, 9078, 11200, 15154
Hpy99I CGWCG 6 cut(s) 1121, 1220, 1351, 2142, 4772, 10595
HpyCH4IV ACGT 9 cut(s) 2578, 3421, 4636, 5771, 10519, 10590, 12481, 13010, 13690
HpySE526I ACGT 9 cut(s) 2578, 3421, 4636, 5771, 10519, 10590, 12481, 13010, 13690
Hsp92I GRCGYC 5 cut(s) 1110, 1181, 1218, 1704, 2225
KasI GGCGCC 3 cut(s) 1109, 1180, 2224
KflI GGGWCCC 3 cut(s) 1872, 2977, 14403
KroI GCCGGC 2 cut(s) 1106, 9550
KroNI GCCGGC 2 cut(s) 1108, 9552
Ksp22I TGATCA 8 cut(s) 556, 2431, 4084, 4441, 5590, 9826, 12423, 12553
LguI GCTCTTC 4 cut(s) 2310, 11855, 11878, 15205
MabI ACCWGGT 3 cut(s) 4378, 7735, 8544
MaeII ACGT 9 cut(s) 2578, 3421, 4636, 5771, 10519, 10590, 12481, 13010, 13690
MbiI CCGCTC 1 cut(s) 8631
MfeI CAATTG 8 cut(s) 6753, 7333, 7494, 10773, 11322, 13780, 14031, 14379
Mly113I GGCGCC 3 cut(s) 1110, 1181, 2225
MmeI TCCRAC 8 cut(s) 836, 1179, 1291, 2622, 4247, 9302, 11534, 12017
Mph1103I ATGCAT 6 cut(s) 3990, 7584, 8610, 12938, 13103, 14292
MroNI GCCGGC 2 cut(s) 1106, 9550
MslI CAYNNNNRTG 8 cut(s) 1688, 3724, 5489, 6004, 6345, 9167, 9910, 10057
MspA1I CMGCKG 8 cut(s) 3724, 5984, 6060, 8744, 11180, 11486, 12671, 14681
MspCI CTTAAG 2 cut(s) 5545, 12464
MunI CAATTG 8 cut(s) 6753, 7333, 7494, 10773, 11322, 13780, 14031, 14379
MvnI CGCG 1 cut(s) 3505
NaeI GCCGGC 2 cut(s) 1108, 9552
NarI GGCGCC 3 cut(s) 1110, 1181, 2225
NciI CCSGG 6 cut(s) 1037, 1425, 1426, 1528, 8023, 11369
NcoI CCATGG 9 cut(s) 104, 2321, 7921, 8525, 9233, 9623, 9863, 12996, 13858
NdeI CATATG 4 cut(s) 6477, 9409, 11718, 12042
NgoMIV GCCGGC 2 cut(s) 1106, 9550
NheI GCTAGC 1 cut(s) 4307
NmeAIII GCCGAG 4 cut(s) 1746, 9487, 10743, 14945
NsbI TGCGCA 2 cut(s) 1682, 9099
NsiI ATGCAT 6 cut(s) 3990, 7584, 8610, 12938, 13103, 14292
NspV TTCGAA 2 cut(s) 6829, 12844
OliI CACNNNNGTG 1 cut(s) 3724
PaeI GCATGC 2 cut(s) 4315, 9898
PaeR7I CTCGAG 1 cut(s) 6630
PagI TCATGA 4 cut(s) 559, 4933, 7656, 10101
PaqCI CACCTGC 2 cut(s) 10009, 14938
PasI CCCWGGG 2 cut(s) 6144, 11026
PceI AGGCCT 3 cut(s) 1286, 3267, 7118
PciI ACATGT 6 cut(s) 40, 3320, 4290, 6340, 13764, 13996
PciSI GCTCTTC 4 cut(s) 2310, 11855, 11878, 15205
PcsI WCGNNNNNNNCGW 1 cut(s) 12841
PdiI GCCGGC 2 cut(s) 1108, 9552
Pfl23II CGTACG 1 cut(s) 8998
PflFI GACNNNGTC 3 cut(s) 5336, 11963, 13369
PflMI CCANNNNNTGG 5 cut(s) 3212, 4382, 5642, 10757, 11026
PfoI TCCNGGA 8 cut(s) 1035, 1526, 5247, 5641, 7072, 7838, 12811, 14443
PluTI GGCGCC 3 cut(s) 1113, 1184, 2228
PmaCI CACGTG 1 cut(s) 10520
PmlI CACGTG 1 cut(s) 10520
Ppu21I YACGTR 3 cut(s) 3422, 4637, 10520
PpuMI RGGWCCY 4 cut(s) 698, 1872, 2977, 14403
PscI ACATGT 6 cut(s) 40, 3320, 4290, 6340, 13764, 13996
PshAI GACNNNNGTC 2 cut(s) 1005, 10319
PshBI ATTAAT 3 cut(s) 821, 3983, 9921
PsiI TTATAA 4 cut(s) 2694, 4899, 6020, 12393
Psp1406I AACGTT 1 cut(s) 12481
Psp5II RGGWCCY 4 cut(s) 698, 1872, 2977, 14403
PspCI CACGTG 1 cut(s) 10520
PspEI GGTNACC 1 cut(s) 11008
PspFI CCCAGC 1 cut(s) 14972
PspLI CGTACG 1 cut(s) 8998
PspOMI GGGCCC 1 cut(s) 11402
PspPPI RGGWCCY 4 cut(s) 698, 1872, 2977, 14403
PspXI VCTCGAGB 1 cut(s) 6630
PstI CTGCAG 9 cut(s) 33, 3585, 7183, 9525, 11518, 13759, 13820, 14913, 14935
PstNI CAGNNNCTG 7 cut(s) 1958, 2006, 3575, 3589, 6722, 8105, 15135
PsyI GACNNNGTC 3 cut(s) 5336, 11963, 13369
PvuII CAGCTG 6 cut(s) 3724, 6060, 8744, 11180, 11486, 14681
RigI GGCCGGCC 1 cut(s) 9554
RseI CAYNNNNRTG 8 cut(s) 1688, 3724, 5489, 6004, 6345, 9167, 9910, 10057
SapI GCTCTTC 4 cut(s) 2310, 11855, 11878, 15205
ScaI AGTACT 5 cut(s) 2912, 3512, 5280, 9250, 11138
SexAI ACCWGGT 3 cut(s) 4378, 7735, 8544
SfoI GGCGCC 3 cut(s) 1111, 1182, 2226
Sfr274I CTCGAG 1 cut(s) 6630
SfuI TTCGAA 2 cut(s) 6829, 12844
SlaI CTCGAG 1 cut(s) 6630
SmaI CCCGGG 1 cut(s) 1426
SmiMI CAYNNNNRTG 8 cut(s) 1688, 3724, 5489, 6004, 6345, 9167, 9910, 10057
SnaBI TACGTA 1 cut(s) 3422
SpeI ACTAGT 2 cut(s) 7348, 13822
SphI GCATGC 2 cut(s) 4315, 9898
SseBI AGGCCT 3 cut(s) 1286, 3267, 7118
SspDI GGCGCC 3 cut(s) 1109, 1180, 2224
SspI AATATT 8 cut(s) 905, 2329, 2648, 3755, 4726, 6881, 7126, 7317
StuI AGGCCT 3 cut(s) 1286, 3267, 7118
TaiI ACGT 9 cut(s) 2581, 3424, 4639, 5774, 10522, 10593, 12484, 13013, 13693
TaqII GACCGA 2 cut(s) 995, 11027
TauI GCSGC 6 cut(s) 1143, 1302, 1571, 8631, 9779, 14893
TspGWI ACGGA 5 cut(s) 963, 3697, 7796, 9357, 13700
TspMI CCCGGG 1 cut(s) 1424
Tth111I GACNNNGTC 3 cut(s) 5336, 11963, 13369
Van91I CCANNNNNTGG 5 cut(s) 3212, 4382, 5642, 10757, 11026
Vha464I CTTAAG 2 cut(s) 5545, 12464
VneI GTGCAC 1 cut(s) 10050
VspI ATTAAT 3 cut(s) 821, 3983, 9921
XagI CCTNNNNNAGG 3 cut(s) 1403, 8514, 13645
XbaI TCTAGA 5 cut(s) 994, 2209, 3119, 4321, 9986
XcmI CCANNNNNNNNNTGG 3 cut(s) 4230, 8545, 11234
XhoI CTCGAG 1 cut(s) 6630
XmaI CCCGGG 1 cut(s) 1424
XmaJI CCTAGG 1 cut(s) 4478
XmiI GTMKAC 4 cut(s) 5442, 6727, 10765, 14232
ZrmI AGTACT 5 cut(s) 2912, 3512, 5280, 9250, 11138
Zsp2I ATGCAT 6 cut(s) 3990, 7584, 8610, 12938, 13103, 14292
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.