MD10G1045200.v1.1

Protein ROOT PRIMORDIUM DEFECTIVE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0014511
Physical Location & Seq
Reverse (-)
6055091 .. 6059367
4277 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1045200.v1.1.491

Sequence Viewer

Length: 1920 bp
ATGTCTCCAATATACATCGCCGTCCGCCGCTCTCTCCCAAAATCATATTCTCAGTCCTCCCACCACCGCCACACCCTCCACAGAACCTTCTTCGTCGACGCCACCACCACAAAATGGGTCCGAGACCGAGGCCTCGACCACGCCGTCGAGAGGGAGAAGAACCTCAGGCCACTGATCAACATCAAGAACTTCATCAAATCAGAGCCGTCCAAGTCCCTCCCCATTTCCATCATCGCTCAAAACAGAGAATCTCTCATGATACCCACCCGCTCCATCGAATTCATCCGCAAATACCCTTCGATTTTCGAGGAATTTCTCCCCGGCGGCGTTGCAGTCCACCCCCATGTCCGGCTCACTGCCCAAGTGCTCGATCTCGACACTGAAGAAGAGCTCATGTACCAGAGCGAGAGCTACAAGCAGGACGTCGCTGACCGGCTTTTGAAGCTCCTAATGCTGGTAAGAACCAATAAACTGCCCCTAAATGTGATTGATCGCTTGAAATGGGATCTGGGTCTTCCTCAAGATTTTGAGAGAACCTTAGTCCCTGAGTATCCGGACTATTTTAATGTCGTAGCTCGCAAAAGTTCGCCTTCTGGGTCCGAAAGTTTGCGGGATTTGGAGTTGGTGTATTGGAAAAATGAATTCGCAAGTTCGGTAATACAGAAGAAAGCTTTAGCTATGGAGAAGAAGGCTTCTGCTAGGAAGAAGAAGGCAATGAGTGGGGATTCTGCTTCAAGGGAGGAAAATCAAATTGTTTTTCCTATGGAGTTTTCGAGAGGTTTTGAGGTGGATAAGAAGTTCAAGAAGTGGATTGATGAGTGGCAGCAGTTGCCTTATGTATCTCCATATGAAAATGCAGCTCACCTTTCTTCAAAGAGTGACGAATCAGATAAGTGGGCGGTCGCGGTTCTGCACGAGCTTCTGCATATTTTGGTTCCGAAGAAGACGGACAGGGAGAATATCCTGTGTCTTGGAGAACATTTAGGTCTTCGGTCGAGGTTTAAGCAAGCATTACACAATCACCCAGGTATATTTTATTTGTCAAACAAGATAGGAACTTATACTGTTGTTTTGAGAGAGGGGTATAAGAGGGGTGTGATTGTTGAAGATCATCCATTAACGAATATGAGAAGCCAGTATATTCACCTTATGAACACGGTAAAGGAAGATGGTAAAACGATCAGCGTGCCAGGTAAAAGTACTCAAGAAAACAAGAAGGTAATTCATGCTAAAGGAAAAGATGAAGAGGAAGAGGATGATGAAACTGAGGACCAGCAGGAAGGGGAGTTGTGTGATTCATCTGATGATGAAGTTGAGTCTGATGATGTTGACGATGATAGTGATGAAGAAGATGAAGATCAGAGTGAGACAACCGTTGAACAAAATGCTATCAATAACAGAGGACGAAGAGGTCGAAAGTCTAATTTTGATGGGAAAGCACCTTTCAGAAATGCTGAAAGAGGTAGGTTGGACGGCAGAAGAGCTAGGAAATCTGATTATGATATGAAAGAACCTTCCAGAAATGCTGAACGAGGAAGGTCAGATGGAAGAAGAGCTAGGAACTCTGATTTTGATGGGACAGCACCTTTCAGAAATGCTGAAAGAGGAAGGTCGGATGGAAGAAGAGCTAGGAAGTCGGATTTTGATGGGACAGCACCTTCCAGAAATGCTGAAAGAGGAAGGTCGGATGGAAGAAGACCTAGAAGATCTGATTTTGATGTGAAAGAACCTTCCAGAAACTCCGAAAGGGGTAGGGATGGTAGACAACACCCTGGTAAGAGCGGAGATGGGGTCTATTCAGAAACTTCTAGAGGAACACAAACTCATTTGAGGCATGATATCCATCAGAATGCAAGAGGAAGATCAAATTTATCTCGAAGCAAGGGGAGGTCATTACCAGAGAAGAACACTAGTTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PORR

Protein Analysis

640

Amino Acids

73.35

Weight (kDa)

8.94

Isoelectric Point (pI)

57.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PORR PF11955 40 - 388 3.9e-114 Plant organelle RNA recognition domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014511)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G71850
fragaria_vesca FvH4_4g08630 FvH4_4g08630
malus_domestica MD10G1045200.v1.1
prunus_persica Prupe.8G052100_v2.0.a1
pyrus_communis pycom10g03160
rosa_chinensis RchiOBHm_Chr4g0405141
rosa_laevigata RLG00000008869
rosa_multiflora Rmu_co8338777.1_g000001 Rmu_ssc0000255.1_g000039
rosa_roxburghii Rroxscaffold_5G00349370
rosa_rugosa Rorug04G0054000 Rorug04G0054100
rosa_samantha Rh4BG122500 Rh4CG136300 Rh4DG122700
rosa_wichuraiana Rw4G010430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 143, 1410
AatII GACGTC 1 cut(s) 426
AccB7I CCANNNNNTGG 1 cut(s) 114
AccBSI CCGCTC 3 cut(s) 30, 270, 1782
AccI GTMKAC 2 cut(s) 96, 1762
AccII CGCG 1 cut(s) 905
AccIII TCCGGA 1 cut(s) 553
AclWI GGATC 1 cut(s) 513
AcsI RAATTY 4 cut(s) 278, 311, 641, 1867
AcuI CTGAAG 1 cut(s) 402
AcyI GRCGYC 2 cut(s) 99, 423
AfaI GTAC 2 cut(s) 398, 1201
AfiI CCNNNNNNNGG 4 cut(s) 114, 150, 348, 454
AgsI TTSAA 7 cut(s) 442, 499, 735, 802, 873, 1106, 1379
AhlI ACTAGT 1 cut(s) 1910
AjnI CCWGG 3 cut(s) 1024, 1189, 1771
AjuI GAANNNNNNNTTGG 2 cut(s) 31, 63
AloI GAACNNNNNNTCC 2 cut(s) 782, 814
Alw21I GWGCWC 2 cut(s) 369, 393
Alw26I GTCTC 3 cut(s) 9, 117, 1361
AlwI GGATC 1 cut(s) 513
Aor13HI TCCGGA 1 cut(s) 553
AoxI GGCC 2 cut(s) 130, 167
ApeKI GCWGC 2 cut(s) 823, 857
ApoI RAATTY 4 cut(s) 278, 311, 641, 1867
AspS9I GGNCC 3 cut(s) 118, 597, 1270
AsuC2I CCSGG 1 cut(s) 321
AsuHPI GGTGA 3 cut(s) 854, 1013, 1136
AvaII GGWCC 3 cut(s) 118, 597, 1270
AxyI CCTNAGG 1 cut(s) 164
BanII GRGCYC 1 cut(s) 393
BauI CACGAG 1 cut(s) 914
BbsI GAAGAC 4 cut(s) 506, 950, 980, 1702
Bbv12I GWGCWC 2 cut(s) 369, 393
BbvI GCAGC 2 cut(s) 835, 869
BceAI ACGGC 4 cut(s) 5, 128, 190, 1489
BcgI CGANNNNNNTGC 2 cut(s) 1168, 1202
BciT130I CCWGG 3 cut(s) 1026, 1191, 1773
BciVI GTATCC 1 cut(s) 561
BclI TGATCA 1 cut(s) 174
BcnI CCSGG 1 cut(s) 321
BcoDI GTCTC 3 cut(s) 9, 117, 1361
BcuI ACTAGT 1 cut(s) 1910
BfaI CTAG 7 cut(s) 699, 1485, 1557, 1629, 1701, 1809, 1911
BfuI GTATCC 1 cut(s) 561
BglII AGATCT 1 cut(s) 1706
BisI GCNGC 4 cut(s) 28, 325, 824, 858
BlsI GCNGC 4 cut(s) 29, 326, 825, 859
BmcAI AGTACT 1 cut(s) 1201
Bme1390I CCNGG 4 cut(s) 321, 1026, 1191, 1773
Bme18I GGWCC 3 cut(s) 118, 597, 1270
BmgT120I GGNCC 3 cut(s) 118, 597, 1270
BmiI GGNNCC 3 cut(s) 119, 598, 936
BmrFI CCNGG 4 cut(s) 321, 1026, 1191, 1773
BpiI GAAGAC 4 cut(s) 506, 950, 980, 1702
BplI GAGNNNNNCTC 2 cut(s) 237, 269
BpuEI CTTGAG 2 cut(s) 504, 1188
BpuMI CCSGG 1 cut(s) 321
BsaBI GATNNNNATC 3 cut(s) 179, 1356, 1842
BsaHI GRCGYC 2 cut(s) 99, 423
BsaI GGTCTC 1 cut(s) 117
BsaJI CCNNGG 4 cut(s) 127, 319, 1024, 1771
BsaWI WCCGGW 1 cut(s) 553
BsaXI ACNNNNNCTCC 4 cut(s) 611, 641, 1776, 1806
Bsc4I CCNNNNNNNGG 4 cut(s) 114, 150, 348, 454
Bse118I RCCGGY 1 cut(s) 432
Bse1I ACTGG 1 cut(s) 1135
Bse21I CCTNAGG 1 cut(s) 164
Bse3DI GCAATG 1 cut(s) 720
Bse8I GATNNNNATC 3 cut(s) 179, 1356, 1842
BseAI TCCGGA 1 cut(s) 553
BseBI CCWGG 3 cut(s) 1026, 1191, 1773
BseDI CCNNGG 4 cut(s) 127, 319, 1024, 1771
BseGI GGATG 6 cut(s) 282, 1111, 1261, 1621, 1693, 1762
BseJI GATNNNNATC 3 cut(s) 179, 1356, 1842
BseLI CCNNNNNNNGG 4 cut(s) 114, 150, 348, 454
BseMI GCAATG 1 cut(s) 720
BseMII CTCAG 4 cut(s) 65, 178, 537, 1257
BseNI ACTGG 1 cut(s) 1135
BseXI GCAGC 2 cut(s) 835, 869
BsgI GTGCAG 1 cut(s) 896
Bsh1236I CGCG 1 cut(s) 905
Bsh1285I CGRYCG 2 cut(s) 903, 995
BshFI GGCC 2 cut(s) 132, 169
BsiEI CGRYCG 2 cut(s) 903, 995
BsiHKAI GWGCWC 2 cut(s) 369, 393
BsiSI CCGG 4 cut(s) 321, 349, 433, 554
BslFI GGGAC 4 cut(s) 199, 527, 1591, 1663
BslI CCNNNNNNNGG 4 cut(s) 114, 150, 348, 454
BsmAI GTCTC 3 cut(s) 9, 117, 1361
BsmFI GGGAC 4 cut(s) 199, 527, 1591, 1663
BsmI GAATGC 1 cut(s) 1855
BsnI GGCC 2 cut(s) 132, 169
Bso31I GGTCTC 1 cut(s) 117
Bsp1286I GDGCHC 2 cut(s) 369, 393
Bsp13I TCCGGA 1 cut(s) 553
Bsp143I GATC 9 cut(s) 174, 370, 490, 505, 1108, 1179, 1357, 1706, 1862
BspANI GGCC 2 cut(s) 132, 169
BspCNI CTCAG 4 cut(s) 64, 177, 538, 1258
BspEI TCCGGA 1 cut(s) 553
BspFNI CGCG 1 cut(s) 905
BspHI TCATGA 1 cut(s) 255
BspLI GGNNCC 3 cut(s) 119, 598, 936
BspPI GGATC 1 cut(s) 513
BspQI GCTCTTC 4 cut(s) 381, 1474, 1546, 1618
BspTNI GGTCTC 1 cut(s) 117
BsrBI CCGCTC 3 cut(s) 30, 270, 1782
BsrDI GCAATG 1 cut(s) 720
BsrFI RCCGGY 1 cut(s) 432
BsrI ACTGG 1 cut(s) 1135
BssAI RCCGGY 1 cut(s) 432
BssECI CCNNGG 4 cut(s) 127, 319, 1024, 1771
BssMI GATC 9 cut(s) 174, 370, 490, 505, 1108, 1179, 1357, 1706, 1862
BssNI GRCGYC 2 cut(s) 99, 423
BssSI CACGAG 1 cut(s) 914
Bst2BI CACGAG 1 cut(s) 914
Bst2UI CCWGG 3 cut(s) 1026, 1191, 1773
Bst4CI ACNGT 3 cut(s) 1066, 1159, 1375
Bst6I CTCTTC 7 cut(s) 381, 1239, 1245, 1402, 1474, 1546, 1618
BstACI GRCGYC 2 cut(s) 99, 423
BstAPI GCANNNNNTGC 1 cut(s) 829
BstC8I GCNNGC 3 cut(s) 577, 1008, 1187
BstDEI CTNAG 6 cut(s) 51, 164, 538, 546, 1266, 1917
BstF5I GGATG 6 cut(s) 282, 1111, 1261, 1621, 1693, 1762
BstFNI CGCG 1 cut(s) 905
BstKTI GATC 9 cut(s) 177, 373, 493, 508, 1111, 1182, 1360, 1709, 1865
BstMAI GTCTC 3 cut(s) 9, 117, 1361
BstMBI GATC 9 cut(s) 174, 370, 490, 505, 1108, 1179, 1357, 1706, 1862
BstMCI CGRYCG 2 cut(s) 903, 995
BstMWI GCNNNNNNNGC 3 cut(s) 442, 451, 829
BstNI CCWGG 3 cut(s) 1026, 1191, 1773
BstSCI CCNGG 4 cut(s) 319, 1024, 1189, 1771
BstUI CGCG 1 cut(s) 905
BstV1I GCAGC 2 cut(s) 835, 869
BstV2I GAAGAC 4 cut(s) 506, 950, 980, 1702
BstX2I RGATCY 2 cut(s) 505, 1706
BstYI RGATCY 2 cut(s) 505, 1706
Bsu36I CCTNAGG 1 cut(s) 164
BsuI GTATCC 1 cut(s) 561
BsuRI GGCC 2 cut(s) 132, 169
BtgZI GCGATG 1 cut(s) 217
BtsCI GGATG 6 cut(s) 282, 1111, 1261, 1621, 1693, 1762
BtsI GCAGTG 1 cut(s) 354
BtsIMutI CAGTG 3 cut(s) 170, 354, 378
Cac8I GCNNGC 3 cut(s) 577, 1008, 1187
CciI TCATGA 1 cut(s) 255
Cfr10I RCCGGY 1 cut(s) 432
Cfr13I GGNCC 3 cut(s) 118, 597, 1270
CseI GACGC 1 cut(s) 107
Csp6I GTAC 2 cut(s) 397, 1200
CviAII CATG 5 cut(s) 256, 344, 394, 1226, 1835
CviQI GTAC 2 cut(s) 397, 1200
DdeI CTNAG 6 cut(s) 51, 164, 538, 546, 1266, 1917
DpnI GATC 9 cut(s) 176, 372, 492, 507, 1110, 1181, 1359, 1708, 1864
DpnII GATC 9 cut(s) 174, 370, 490, 505, 1108, 1179, 1357, 1706, 1862
DrdI GACNNNNNNGTC 2 cut(s) 143, 1410
DseDI GACNNNNNNGTC 2 cut(s) 143, 1410
Eam1104I CTCTTC 7 cut(s) 381, 1239, 1245, 1402, 1474, 1546, 1618
EarI CTCTTC 7 cut(s) 381, 1239, 1245, 1402, 1474, 1546, 1618
EciI GGCGGA 1 cut(s) 14
Ecl136II GAGCTC 1 cut(s) 391
Eco147I AGGCCT 1 cut(s) 132
Eco24I GRGCYC 1 cut(s) 393
Eco31I GGTCTC 1 cut(s) 117
Eco32I GATATC 1 cut(s) 1840
Eco47I GGWCC 3 cut(s) 118, 597, 1270
Eco53kI GAGCTC 1 cut(s) 391
Eco57I CTGAAG 1 cut(s) 402
Eco81I CCTNAGG 1 cut(s) 164
EcoICRI GAGCTC 1 cut(s) 391
EcoRI GAATTC 2 cut(s) 278, 641
EcoRII CCWGG 3 cut(s) 1024, 1189, 1771
EcoRV GATATC 1 cut(s) 1840
EcoT38I GRGCYC 1 cut(s) 393
FaeI CATG 5 cut(s) 259, 347, 397, 1229, 1838
FalI AAGNNNNNCTT 2 cut(s) 574, 606
FaqI GGGAC 4 cut(s) 199, 527, 1591, 1663
FatI CATG 5 cut(s) 255, 343, 393, 1225, 1834
FauI CCCGC 2 cut(s) 275, 603
FauNDI CATATG 1 cut(s) 847
FbaI TGATCA 1 cut(s) 174
FblI GTMKAC 2 cut(s) 96, 1762
Fnu4HI GCNGC 4 cut(s) 28, 325, 824, 858
FokI GGATG 6 cut(s) 269, 1098, 1268, 1628, 1700, 1769
FriOI GRGCYC 1 cut(s) 393
Fsp4HI GCNGC 4 cut(s) 28, 325, 824, 858
FspBI CTAG 7 cut(s) 699, 1485, 1557, 1629, 1701, 1809, 1911
GluI GCNGC 4 cut(s) 28, 325, 824, 858
HaeIII GGCC 2 cut(s) 132, 169
HapII CCGG 4 cut(s) 321, 349, 433, 554
HgaI GACGC 1 cut(s) 107
Hin1I GRCGYC 2 cut(s) 99, 423
Hin1II CATG 5 cut(s) 259, 347, 397, 1229, 1838
HincII GTYRAC 2 cut(s) 97, 1330
HindII GTYRAC 2 cut(s) 97, 1330
HindIII AAGCTT 1 cut(s) 669
HinfI GANTC 5 cut(s) 248, 725, 884, 1295, 1316
HpaII CCGG 4 cut(s) 321, 349, 433, 554
HphI GGTGA 3 cut(s) 854, 1013, 1136
Hpy166II GTNNAC 4 cut(s) 97, 337, 1330, 1763
Hpy8I GTNNAC 4 cut(s) 97, 337, 1330, 1763
Hpy99I CGWCG 4 cut(s) 98, 101, 149, 428
HpyCH4III ACNGT 3 cut(s) 1066, 1159, 1375
HpyCH4IV ACGT 1 cut(s) 423
HpyCH4V TGCA 5 cut(s) 332, 857, 913, 925, 1853
HpyF10VI GCNNNNNNNGC 3 cut(s) 442, 451, 829
HpyF3I CTNAG 6 cut(s) 51, 164, 538, 546, 1266, 1917
HpySE526I ACGT 1 cut(s) 423
Hsp92I GRCGYC 2 cut(s) 99, 423
Hsp92II CATG 5 cut(s) 259, 347, 397, 1229, 1838
Kpn2I TCCGGA 1 cut(s) 553
Ksp22I TGATCA 1 cut(s) 174
Kzo9I GATC 9 cut(s) 174, 370, 490, 505, 1108, 1179, 1357, 1706, 1862
LguI GCTCTTC 4 cut(s) 381, 1474, 1546, 1618
LmnI GCTCC 2 cut(s) 275, 450
Lsp1109I GCAGC 2 cut(s) 835, 869
MaeI CTAG 7 cut(s) 699, 1485, 1557, 1629, 1701, 1809, 1911
MaeII ACGT 1 cut(s) 423
MaeIII GTNAC 1 cut(s) 878
MalI GATC 9 cut(s) 176, 372, 492, 507, 1110, 1181, 1359, 1708, 1864
MbiI CCGCTC 3 cut(s) 30, 270, 1782
MboI GATC 9 cut(s) 174, 370, 490, 505, 1108, 1179, 1357, 1706, 1862
MflI RGATCY 2 cut(s) 505, 1706
MhlI GDGCHC 2 cut(s) 369, 393
MluCI AATT 7 cut(s) 278, 311, 641, 750, 1221, 1423, 1867
MlyI GAGTC 1 cut(s) 1325
MmeI TCCRAC 4 cut(s) 1449, 1593, 1617, 1665
MroI TCCGGA 1 cut(s) 553
MseI TTAA 3 cut(s) 564, 1002, 1118
MslI CAYNNNNRTG 2 cut(s) 342, 1848
MspI CCGG 4 cut(s) 321, 349, 433, 554
MspR9I CCNGG 4 cut(s) 321, 1026, 1191, 1773
Mva1269I GAATGC 1 cut(s) 1855
MvaI CCWGG 3 cut(s) 1026, 1191, 1773
MvnI CGCG 1 cut(s) 905
MwoI GCNNNNNNNGC 3 cut(s) 442, 451, 829
NciI CCSGG 1 cut(s) 321
NdeI CATATG 1 cut(s) 847
NdeII GATC 9 cut(s) 174, 370, 490, 505, 1108, 1179, 1357, 1706, 1862
NlaIII CATG 5 cut(s) 259, 347, 397, 1229, 1838
NlaIV GGNNCC 3 cut(s) 119, 598, 936
NmuCI GTSAC 1 cut(s) 878
PagI TCATGA 1 cut(s) 255
PceI AGGCCT 1 cut(s) 132
PciSI GCTCTTC 4 cut(s) 381, 1474, 1546, 1618
PcsI WCGNNNNNNNCGW 2 cut(s) 141, 1411
PctI GAATGC 1 cut(s) 1855
PfeI GAWTC 4 cut(s) 248, 725, 884, 1295
PflMI CCANNNNNTGG 1 cut(s) 114
PkrI GCNGC 4 cut(s) 29, 326, 825, 859
PleI GAGTC 1 cut(s) 1324
PpsI GAGTC 1 cut(s) 1324
Psp124BI GAGCTC 1 cut(s) 393
Psp6I CCWGG 3 cut(s) 1024, 1189, 1771
PspGI CCWGG 3 cut(s) 1024, 1189, 1771
PspN4I GGNNCC 3 cut(s) 119, 598, 936
PspPI GGNCC 3 cut(s) 118, 597, 1270
PsuI RGATCY 2 cut(s) 505, 1706
RsaI GTAC 2 cut(s) 398, 1201
RsaNI GTAC 2 cut(s) 397, 1200
RseI CAYNNNNRTG 2 cut(s) 342, 1848
SacI GAGCTC 1 cut(s) 393
SalI GTCGAC 1 cut(s) 95
SapI GCTCTTC 4 cut(s) 381, 1474, 1546, 1618
SaqAI TTAA 3 cut(s) 564, 1002, 1118
SatI GCNGC 4 cut(s) 28, 325, 824, 858
Sau3AI GATC 9 cut(s) 174, 370, 490, 505, 1108, 1179, 1357, 1706, 1862
Sau96I GGNCC 3 cut(s) 118, 597, 1270
ScaI AGTACT 1 cut(s) 1201
SchI GAGTC 1 cut(s) 1325
ScrFI CCNGG 4 cut(s) 321, 1026, 1191, 1773
SduI GDGCHC 2 cut(s) 369, 393
SgrDI CGTCGACG 1 cut(s) 95
SinI GGWCC 3 cut(s) 118, 597, 1270
SmiMI CAYNNNNRTG 2 cut(s) 342, 1848
SmlI CTYRAG 2 cut(s) 519, 1203
SmoI CTYRAG 2 cut(s) 519, 1203
SpeI ACTAGT 1 cut(s) 1910
Sse9I AATT 7 cut(s) 278, 311, 641, 750, 1221, 1423, 1867
SseBI AGGCCT 1 cut(s) 132
SspMI CTAG 7 cut(s) 699, 1485, 1557, 1629, 1701, 1809, 1911
SstI GAGCTC 1 cut(s) 393
StuI AGGCCT 1 cut(s) 132
StyD4I CCNGG 4 cut(s) 319, 1024, 1189, 1771
TaaI ACNGT 3 cut(s) 1066, 1159, 1375
TaiI ACGT 1 cut(s) 426
TaqII GACCGA 2 cut(s) 141, 981
TasI AATT 7 cut(s) 278, 311, 641, 750, 1221, 1423, 1867
TatI WGTACW 1 cut(s) 1199
TauI GCSGC 2 cut(s) 30, 327
TfiI GAWTC 4 cut(s) 248, 725, 884, 1295
Tru1I TTAA 3 cut(s) 564, 1002, 1118
Tru9I TTAA 3 cut(s) 564, 1002, 1118
TscAI CASTG 3 cut(s) 177, 361, 385
TseFI GTSAC 1 cut(s) 878
TseI GCWGC 2 cut(s) 823, 857
Tsp45I GTSAC 1 cut(s) 878
TspGWI ACGGA 1 cut(s) 962
TspRI CASTG 3 cut(s) 177, 361, 385
Van91I CCANNNNNTGG 1 cut(s) 114
VpaK11BI GGWCC 3 cut(s) 118, 597, 1270
XapI RAATTY 4 cut(s) 278, 311, 641, 1867
XbaI TCTAGA 1 cut(s) 1808
XmiI GTMKAC 2 cut(s) 96, 1762
XspI CTAG 7 cut(s) 699, 1485, 1557, 1629, 1701, 1809, 1911
ZraI GACGTC 1 cut(s) 424
ZrmI AGTACT 1 cut(s) 1201
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.