Prupe.8G052100_v2.0.a1

Protein ROOT PRIMORDIUM DEFECTIVE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0014511
Physical Location & Seq
Reverse (-)
5708961 .. 5713363
4403 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G052100.1

Sequence Viewer

Length: 1851 bp
ATGTCTCCCATTTACTTCACCTTTCGCTCTCTCCCAAAACCACACTCTCAGTCCTCCCACCACAGCCATAGCCGCCACAGAACCTTCTTCGTAGACGCCACCACCAAATGGGTCCGAGATCGAGGCCTTGACCACGCCGTCGAGAGGGAGAAGAACCTCAGGCCAATGGTCAACATCAAGAATTTCATCAAATCAGAGCCGTCCAAGTCCCTCCCCATTTCCATCATCGCCCAAAACAGAGAATCCCTTATGATACCCACGCGCCCCATCGATTTCATCCGCAAATACCCTTCGATTTTCGAGGAGTTCCTTCCCGGCGGCGGCGCAATCCAGCCTCATGTCCGGCTCACTGGCCAAGTGCTCGATCTCGATGCCGAGGAGGAGCTGATGTATCAGAGTGAGAGCTACAGGCAGGATGTCGCTGACCGGCTTTTGAAGCTCTTGATGCTGGTAAGAACCAATAAATTGCCGCTAAATGTCATCGAGAGCTTGAAATGGGATCTGGGTCTTCCTCATGATTATCAGAAAAGTTTAGTCCACGAGTATCCGGACTATTTTAATATTGTTGTTGGCAAAAATTCGGCATCTGGGTGGAAGGATTTGCGGGATTTGGAGTTGGTATGTTGGAGAAATGAAATGGCAACTTCGGTTTTCGAGAAGAACGCTGCAGCTAAGGAGAAGAAGGCTTCAGCTAAGAAGAAGAGGGCATTGAGTGGGGATTCGCCTTCTAAGGAGGAAGACCAATGTGTTTTTCCTATGCAGTTCTCCAGAGGTTTTGAGATGGATAAGAAGTTGAAGAAGTGGATTGATGAGTGGCAGAAGTTGCCTTATGTGTCTCCATATGAAAATGCAGCTCATCTTTCGTCTAAGAGTGACGAATCAGATAAGTGGGTGGTAGCAATTCTGCACGAGCTTCTGCATATTTTGGTTCCCAAGAAGACAGACAGGGAGAATTTGCTGTGTCTTGGAGAATATTTGGGTCTTCGGTCGAGGTTTAAGCAAGCATTGCTTCACCATCCAGGTATATTTTATTTGTCAAACAAGATAGGAACTTATACTGTTGTTTTGAGAGAGGGATATAAGAGGGGTACGATTATTGAGAATCATCAATTAATGAATATGAGAAGCCAGTATATTCACCTCATGAACACAGTAAAGGAAGATAGTAAAATGGTTAGCGTGCCCGGCGGAAGTACTCTAGAAAAGAAGGCAGTAGTTGATGTTCCTAAAGGAAAAGGTGAAGAAAAGGAGGATGATGAAAGTGAGGAAGAGCAGGAAGGCGAGTTGCGTGATTCATCTGATACTGAATTTTTGTATGATGATGACAGTGATGAAGAGGATGAAGATCTGAGTGAGACAAGCATTGAAAAACGTGGTATTAATAACAGAGGAAGGAGAGGTAGGAAATCTCATTTTGATGGGAAAACACCTTCCAGAAATGCTGAAAGAGGAACATCAGGTGGAAGAAAAGCTAGAAACTCTGATTTTAATGGGAAAACACCTTCCAGAAATGTTGAAAGAGGAACATCAGGTGGAAGAAAAGCTAGAAACTCTGATTTTAATTGGAAAACACCTTCCAGAAATGTTGAAGGAGGAAGGTCAGGTGGAAGAAGAGATAGGAATTCTGATATCGATGTGAAAGCACCTTTTAGAAATGCTCAAAGGGGAAGGGCAGGTGGAGAACACCCTGGTAAGAGCAGGGATGCGGTCTCTTCTGACACTTCTAGAAGAACAAGAACTGATGTTAGGCATAATATCCGTCAGATTTCAAGAGAGAGATTGAATTTCTCTCAAAGCAAGGGGAGGTCATTACCAGGCGAGAAGACTAGTGTTGAGAAAAGATTCAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PORR

Protein Analysis

617

Amino Acids

70.53

Weight (kDa)

9.37

Isoelectric Point (pI)

51.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014511)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G71850
fragaria_vesca FvH4_4g08630 FvH4_4g08630
malus_domestica MD10G1045200.v1.1
prunus_persica Prupe.8G052100_v2.0.a1
pyrus_communis pycom10g03160
rosa_chinensis RchiOBHm_Chr4g0405141
rosa_laevigata RLG00000008869
rosa_multiflora Rmu_co8338777.1_g000001 Rmu_ssc0000255.1_g000039
rosa_roxburghii Rroxscaffold_5G00349370
rosa_rugosa Rorug04G0054000 Rorug04G0054100
rosa_samantha Rh4BG122500 Rh4CG136300 Rh4DG122700
rosa_wichuraiana Rw4G010430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1664
AasI GACNNNNNNGTC 1 cut(s) 137
Acc36I ACCTGC 1 cut(s) 1664
AccB7I CCANNNNNTGG 1 cut(s) 108
AccI GTMKAC 1 cut(s) 93
AccII CGCG 1 cut(s) 262
AccIII TCCGGA 1 cut(s) 547
AciI CCGC 8 cut(s) 73, 280, 318, 321, 470, 604, 1188, 1706
AclWI GGATC 1 cut(s) 507
AcoI YGGCCR 1 cut(s) 352
AcsI RAATTY 6 cut(s) 181, 577, 952, 1307, 1621, 1783
AcuI CTGAAG 1 cut(s) 672
AcyI GRCGYC 1 cut(s) 96
AfaI GTAC 2 cut(s) 1090, 1195
AfiI CCNNNNNNNGG 3 cut(s) 108, 144, 320
AgsI TTSAA 8 cut(s) 436, 493, 796, 1367, 1517, 1589, 1770, 1783
AhlI ACTAGT 1 cut(s) 1826
AjnI CCWGG 3 cut(s) 1018, 1687, 1813
AjuI GAANNNNNNNTTGG 2 cut(s) 735, 767
Alw21I GWGCWC 1 cut(s) 363
Alw26I GTCTC 4 cut(s) 9, 840, 1349, 1714
AlwI GGATC 1 cut(s) 507
Aor13HI TCCGGA 1 cut(s) 547
AoxI GGCC 3 cut(s) 124, 161, 352
ApeKI GCWGC 3 cut(s) 665, 668, 851
ApoI RAATTY 6 cut(s) 181, 577, 952, 1307, 1621, 1783
AseI ATTAAT 2 cut(s) 1112, 1380
Asp700I GAANNNNTTC 1 cut(s) 1841
AspLEI GCGC 2 cut(s) 264, 326
AspS9I GGNCC 1 cut(s) 112
AsuC2I CCSGG 2 cut(s) 315, 1185
AsuHPI GGTGA 4 cut(s) 10, 1004, 1130, 1250
AvaII GGWCC 1 cut(s) 112
AxyI CCTNAGG 1 cut(s) 158
BaeGI GKGCMC 1 cut(s) 1185
BalI TGGCCA 1 cut(s) 354
BauI CACGAG 2 cut(s) 539, 908
BbsI GAAGAC 5 cut(s) 500, 744, 944, 974, 1829
Bbv12I GWGCWC 1 cut(s) 363
BbvI GCAGC 3 cut(s) 652, 680, 863
BccI CCATC 5 cut(s) 230, 275, 775, 1023, 1412
BceAI ACGGC 2 cut(s) 122, 184
BcgI CGANNNNNNTGC 2 cut(s) 353, 387
BciT130I CCWGG 3 cut(s) 1020, 1689, 1815
BciVI GTATCC 1 cut(s) 555
BcnI CCSGG 2 cut(s) 315, 1185
BcoDI GTCTC 4 cut(s) 9, 840, 1349, 1714
BcuI ACTAGT 1 cut(s) 1826
BfaI CTAG 5 cut(s) 1199, 1473, 1545, 1725, 1827
BfmI CTRYAG 2 cut(s) 406, 666
BfuAI ACCTGC 1 cut(s) 1664
BfuI GTATCC 1 cut(s) 555
BglII AGATCT 1 cut(s) 1345
BisI GCNGC 7 cut(s) 73, 319, 322, 470, 666, 669, 852
BlsI GCNGC 7 cut(s) 74, 320, 323, 471, 667, 670, 853
BmcAI AGTACT 1 cut(s) 1195
Bme1390I CCNGG 5 cut(s) 315, 1020, 1185, 1689, 1815
Bme18I GGWCC 1 cut(s) 112
BmgT120I GGNCC 1 cut(s) 112
BmiI GGNNCC 2 cut(s) 113, 930
BmrFI CCNGG 5 cut(s) 315, 1020, 1185, 1689, 1815
BmsI GCATC 4 cut(s) 361, 435, 593, 1693
BpiI GAAGAC 5 cut(s) 500, 744, 944, 974, 1829
BpmI CTGGAG 1 cut(s) 751
Bpu10I CCTNAGC 1 cut(s) 672
BpuMI CCSGG 2 cut(s) 315, 1185
Bsa29I ATCGAT 2 cut(s) 270, 1632
BsaBI GATNNNNATC 1 cut(s) 1344
BsaHI GRCGYC 1 cut(s) 96
BsaI GGTCTC 1 cut(s) 1714
BsaJI CCNNGG 2 cut(s) 375, 1687
BsaWI WCCGGW 1 cut(s) 547
BsaXI ACNNNNNCTCC 2 cut(s) 374, 404
Bsc4I CCNNNNNNNGG 3 cut(s) 108, 144, 320
Bse118I RCCGGY 1 cut(s) 426
Bse1I ACTGG 2 cut(s) 355, 1129
Bse21I CCTNAGG 1 cut(s) 158
Bse3DI GCAATG 1 cut(s) 1004
Bse8I GATNNNNATC 1 cut(s) 1344
BseAI TCCGGA 1 cut(s) 547
BseBI CCWGG 3 cut(s) 1020, 1689, 1815
BseCI ATCGAT 2 cut(s) 270, 1632
BseDI CCNNGG 2 cut(s) 375, 1687
BseGI GGATG 6 cut(s) 276, 421, 1015, 1258, 1345, 1708
BseJI GATNNNNATC 1 cut(s) 1344
BseLI CCNNNNNNNGG 3 cut(s) 108, 144, 320
BseMI GCAATG 1 cut(s) 1004
BseMII CTCAG 3 cut(s) 62, 172, 1340
BseNI ACTGG 2 cut(s) 355, 1129
BseRI GAGGAG 3 cut(s) 317, 392, 395
BseSI GKGCMC 1 cut(s) 1185
BseXI GCAGC 3 cut(s) 652, 680, 863
BsgI GTGCAG 1 cut(s) 890
Bsh1236I CGCG 1 cut(s) 262
Bsh1285I CGRYCG 1 cut(s) 989
BshFI GGCC 3 cut(s) 126, 163, 354
BshVI ATCGAT 2 cut(s) 270, 1632
BsiEI CGRYCG 1 cut(s) 989
BsiHKAI GWGCWC 1 cut(s) 363
BsiSI CCGG 5 cut(s) 315, 343, 427, 548, 1185
BslFI GGGAC 1 cut(s) 193
BslI CCNNNNNNNGG 3 cut(s) 108, 144, 320
BsmAI GTCTC 4 cut(s) 9, 840, 1349, 1714
BsmFI GGGAC 1 cut(s) 193
BsnI GGCC 3 cut(s) 126, 163, 354
Bso31I GGTCTC 1 cut(s) 1714
Bsp1286I GDGCHC 2 cut(s) 363, 1185
Bsp13I TCCGGA 1 cut(s) 547
Bsp143I GATC 4 cut(s) 118, 364, 499, 1345
BspACI CCGC 8 cut(s) 73, 280, 318, 321, 470, 604, 1188, 1706
BspANI GGCC 3 cut(s) 126, 163, 354
BspCNI CTCAG 3 cut(s) 61, 171, 1341
BspDI ATCGAT 2 cut(s) 270, 1632
BspEI TCCGGA 1 cut(s) 547
BspFNI CGCG 1 cut(s) 262
BspHI TCATGA 2 cut(s) 514, 1143
BspLI GGNNCC 2 cut(s) 113, 930
BspMAI CTGCAG 1 cut(s) 670
BspMI ACCTGC 1 cut(s) 1664
BspPI GGATC 1 cut(s) 507
BspQI GCTCTTC 1 cut(s) 1263
BspTNI GGTCTC 1 cut(s) 1714
BsrDI GCAATG 1 cut(s) 1004
BsrFI RCCGGY 1 cut(s) 426
BsrI ACTGG 2 cut(s) 355, 1129
BssAI RCCGGY 1 cut(s) 426
BssECI CCNNGG 2 cut(s) 375, 1687
BssMI GATC 4 cut(s) 118, 364, 499, 1345
BssNI GRCGYC 1 cut(s) 96
BssSI CACGAG 2 cut(s) 539, 908
Bst2BI CACGAG 2 cut(s) 539, 908
Bst2UI CCWGG 3 cut(s) 1020, 1689, 1815
Bst4CI ACNGT 3 cut(s) 1060, 1153, 1328
Bst6I CTCTTC 5 cut(s) 695, 1263, 1329, 1606, 1717
BstACI GRCGYC 1 cut(s) 96
BstAPI GCANNNNNTGC 2 cut(s) 823, 1006
BstC8I GCNNGC 2 cut(s) 1002, 1181
BstDEI CTNAG 7 cut(s) 48, 158, 672, 693, 729, 867, 1349
BstF5I GGATG 6 cut(s) 276, 421, 1015, 1258, 1345, 1708
BstFNI CGCG 1 cut(s) 262
BstHHI GCGC 2 cut(s) 264, 326
BstKTI GATC 4 cut(s) 121, 367, 502, 1348
BstMAI GTCTC 4 cut(s) 9, 840, 1349, 1714
BstMBI GATC 4 cut(s) 118, 364, 499, 1345
BstMCI CGRYCG 1 cut(s) 989
BstMWI GCNNNNNNNGC 6 cut(s) 72, 436, 445, 823, 1006, 1185
BstNI CCWGG 3 cut(s) 1020, 1689, 1815
BstSCI CCNGG 5 cut(s) 313, 1018, 1183, 1687, 1813
BstSFI CTRYAG 2 cut(s) 406, 666
BstSLI GKGCMC 1 cut(s) 1185
BstUI CGCG 1 cut(s) 262
BstV1I GCAGC 3 cut(s) 652, 680, 863
BstV2I GAAGAC 5 cut(s) 500, 744, 944, 974, 1829
BstX2I RGATCY 2 cut(s) 499, 1345
BstYI RGATCY 2 cut(s) 499, 1345
Bsu15I ATCGAT 2 cut(s) 270, 1632
Bsu36I CCTNAGG 1 cut(s) 158
BsuI GTATCC 1 cut(s) 555
BsuRI GGCC 3 cut(s) 126, 163, 354
BsuTUI ATCGAT 2 cut(s) 270, 1632
BtgZI GCGATG 1 cut(s) 211
BtsCI GGATG 6 cut(s) 276, 421, 1015, 1258, 1345, 1708
BtsIMutI CAGTG 2 cut(s) 348, 1333
BveI ACCTGC 1 cut(s) 1664
Cac8I GCNNGC 2 cut(s) 1002, 1181
CciI TCATGA 2 cut(s) 514, 1143
CfoI GCGC 2 cut(s) 264, 326
Cfr10I RCCGGY 1 cut(s) 426
Cfr13I GGNCC 1 cut(s) 112
ClaI ATCGAT 2 cut(s) 270, 1632
CseI GACGC 1 cut(s) 104
Csp6I GTAC 2 cut(s) 1089, 1194
CviAII CATG 3 cut(s) 338, 515, 1144
CviQI GTAC 2 cut(s) 1089, 1194
DdeI CTNAG 7 cut(s) 48, 158, 672, 693, 729, 867, 1349
DpnI GATC 4 cut(s) 120, 366, 501, 1347
DpnII GATC 4 cut(s) 118, 364, 499, 1345
DrdI GACNNNNNNGTC 1 cut(s) 137
DseDI GACNNNNNNGTC 1 cut(s) 137
EaeI YGGCCR 1 cut(s) 352
Eam1104I CTCTTC 5 cut(s) 695, 1263, 1329, 1606, 1717
EarI CTCTTC 5 cut(s) 695, 1263, 1329, 1606, 1717
EciI GGCGGA 1 cut(s) 1203
Eco147I AGGCCT 1 cut(s) 126
Eco31I GGTCTC 1 cut(s) 1714
Eco32I GATATC 1 cut(s) 1630
Eco47I GGWCC 1 cut(s) 112
Eco57I CTGAAG 1 cut(s) 672
Eco81I CCTNAGG 1 cut(s) 158
EcoRI GAATTC 1 cut(s) 1621
EcoRII CCWGG 3 cut(s) 1018, 1687, 1813
EcoRV GATATC 1 cut(s) 1630
FaeI CATG 3 cut(s) 341, 518, 1147
FalI AAGNNNNNCTT 2 cut(s) 993, 1025
FaqI GGGAC 1 cut(s) 193
FatI CATG 3 cut(s) 337, 514, 1143
FauI CCCGC 1 cut(s) 597
FauNDI CATATG 1 cut(s) 841
FblI GTMKAC 1 cut(s) 93
Fnu4HI GCNGC 7 cut(s) 73, 319, 322, 470, 666, 669, 852
FokI GGATG 6 cut(s) 263, 428, 1002, 1265, 1352, 1715
Fsp4HI GCNGC 7 cut(s) 73, 319, 322, 470, 666, 669, 852
FspBI CTAG 5 cut(s) 1199, 1473, 1545, 1725, 1827
GlaI GCGC 2 cut(s) 263, 325
GluI GCNGC 7 cut(s) 73, 319, 322, 470, 666, 669, 852
GsuI CTGGAG 1 cut(s) 751
HaeIII GGCC 3 cut(s) 126, 163, 354
HapII CCGG 5 cut(s) 315, 343, 427, 548, 1185
HgaI GACGC 1 cut(s) 104
HhaI GCGC 2 cut(s) 264, 326
Hin1I GRCGYC 1 cut(s) 96
Hin1II CATG 3 cut(s) 341, 518, 1147
Hin6I GCGC 2 cut(s) 262, 324
HinP1I GCGC 2 cut(s) 262, 324
HincII GTYRAC 1 cut(s) 172
HindII GTYRAC 1 cut(s) 172
HinfI GANTC 6 cut(s) 242, 719, 878, 1102, 1292, 1842
HpaII CCGG 5 cut(s) 315, 343, 427, 548, 1185
HphI GGTGA 4 cut(s) 10, 1004, 1130, 1250
Hpy166II GTNNAC 3 cut(s) 94, 172, 538
Hpy8I GTNNAC 3 cut(s) 94, 172, 538
Hpy99I CGWCG 1 cut(s) 143
HpyCH4III ACNGT 3 cut(s) 1060, 1153, 1328
HpyCH4IV ACGT 1 cut(s) 1372
HpyCH4V TGCA 5 cut(s) 668, 760, 851, 907, 919
HpyF10VI GCNNNNNNNGC 6 cut(s) 72, 436, 445, 823, 1006, 1185
HpyF3I CTNAG 7 cut(s) 48, 158, 672, 693, 729, 867, 1349
HpySE526I ACGT 1 cut(s) 1372
Hsp92I GRCGYC 1 cut(s) 96
Hsp92II CATG 3 cut(s) 341, 518, 1147
HspAI GCGC 2 cut(s) 262, 324
Kpn2I TCCGGA 1 cut(s) 547
Kzo9I GATC 4 cut(s) 118, 364, 499, 1345
LguI GCTCTTC 1 cut(s) 1263
LmnI GCTCC 1 cut(s) 382
Lsp1109I GCAGC 3 cut(s) 652, 680, 863
LweI GCATC 4 cut(s) 361, 435, 593, 1693
MaeI CTAG 5 cut(s) 1199, 1473, 1545, 1725, 1827
MaeII ACGT 1 cut(s) 1372
MaeIII GTNAC 1 cut(s) 872
MalI GATC 4 cut(s) 120, 366, 501, 1347
MboI GATC 4 cut(s) 118, 364, 499, 1345
MflI RGATCY 2 cut(s) 499, 1345
MhlI GDGCHC 2 cut(s) 363, 1185
MlsI TGGCCA 1 cut(s) 354
MluNI TGGCCA 1 cut(s) 354
MmeI TCCRAC 1 cut(s) 605
Mox20I TGGCCA 1 cut(s) 354
MroI TCCGGA 1 cut(s) 547
MroXI GAANNNNTTC 1 cut(s) 1841
MscI TGGCCA 1 cut(s) 354
MseI TTAA 6 cut(s) 558, 996, 1112, 1380, 1488, 1560
MslI CAYNNNNRTG 2 cut(s) 589, 1416
Msp20I TGGCCA 1 cut(s) 354
MspI CCGG 5 cut(s) 315, 343, 427, 548, 1185
MspR9I CCNGG 5 cut(s) 315, 1020, 1185, 1689, 1815
MvaI CCWGG 3 cut(s) 1020, 1689, 1815
MvnI CGCG 1 cut(s) 262
MwoI GCNNNNNNNGC 6 cut(s) 72, 436, 445, 823, 1006, 1185
NciI CCSGG 2 cut(s) 315, 1185
NdeI CATATG 1 cut(s) 841
NdeII GATC 4 cut(s) 118, 364, 499, 1345
NlaIII CATG 3 cut(s) 341, 518, 1147
NlaIV GGNNCC 2 cut(s) 113, 930
NmeAIII GCCGAG 1 cut(s) 400
NmuCI GTSAC 1 cut(s) 872
PagI TCATGA 2 cut(s) 514, 1143
PaqCI CACCTGC 1 cut(s) 1664
PceI AGGCCT 1 cut(s) 126
PciSI GCTCTTC 1 cut(s) 1263
PdmI GAANNNNTTC 1 cut(s) 1841
PfeI GAWTC 6 cut(s) 242, 719, 878, 1102, 1292, 1842
PflMI CCANNNNNTGG 1 cut(s) 108
PkrI GCNGC 7 cut(s) 74, 320, 323, 471, 667, 670, 853
PshBI ATTAAT 2 cut(s) 1112, 1380
Psp6I CCWGG 3 cut(s) 1018, 1687, 1813
PspGI CCWGG 3 cut(s) 1018, 1687, 1813
PspN4I GGNNCC 2 cut(s) 113, 930
PspPI GGNCC 1 cut(s) 112
PsrI GAACNNNNNNTAC 2 cut(s) 1206, 1238
PstI CTGCAG 1 cut(s) 670
PsuI RGATCY 2 cut(s) 499, 1345
RsaI GTAC 2 cut(s) 1090, 1195
RsaNI GTAC 2 cut(s) 1089, 1194
RseI CAYNNNNRTG 2 cut(s) 589, 1416
SapI GCTCTTC 1 cut(s) 1263
SaqAI TTAA 6 cut(s) 558, 996, 1112, 1380, 1488, 1560
SatI GCNGC 7 cut(s) 73, 319, 322, 470, 666, 669, 852
Sau3AI GATC 4 cut(s) 118, 364, 499, 1345
Sau96I GGNCC 1 cut(s) 112
ScaI AGTACT 1 cut(s) 1195
ScrFI CCNGG 5 cut(s) 315, 1020, 1185, 1689, 1815
SduI GDGCHC 2 cut(s) 363, 1185
SfaNI GCATC 4 cut(s) 361, 435, 593, 1693
SfcI CTRYAG 2 cut(s) 406, 666
SinI GGWCC 1 cut(s) 112
SmiMI CAYNNNNRTG 2 cut(s) 589, 1416
SpeI ACTAGT 1 cut(s) 1826
SseBI AGGCCT 1 cut(s) 126
SsiI CCGC 8 cut(s) 73, 280, 318, 321, 470, 604, 1188, 1706
SspI AATATT 2 cut(s) 562, 974
SspMI CTAG 5 cut(s) 1199, 1473, 1545, 1725, 1827
StuI AGGCCT 1 cut(s) 126
StyD4I CCNGG 5 cut(s) 313, 1018, 1183, 1687, 1813
TaaI ACNGT 3 cut(s) 1060, 1153, 1328
TaiI ACGT 1 cut(s) 1375
TaqII GACCGA 1 cut(s) 975
TatI WGTACW 1 cut(s) 1193
TauI GCSGC 4 cut(s) 75, 321, 324, 472
TfiI GAWTC 6 cut(s) 242, 719, 878, 1102, 1292, 1842
Tru1I TTAA 6 cut(s) 558, 996, 1112, 1380, 1488, 1560
Tru9I TTAA 6 cut(s) 558, 996, 1112, 1380, 1488, 1560
TscAI CASTG 2 cut(s) 355, 1333
TseFI GTSAC 1 cut(s) 872
TseI GCWGC 3 cut(s) 665, 668, 851
Tsp45I GTSAC 1 cut(s) 872
TspGWI ACGGA 1 cut(s) 1748
TspRI CASTG 2 cut(s) 355, 1333
Van91I CCANNNNNTGG 1 cut(s) 108
VpaK11BI GGWCC 1 cut(s) 112
VspI ATTAAT 2 cut(s) 1112, 1380
XapI RAATTY 6 cut(s) 181, 577, 952, 1307, 1621, 1783
XbaI TCTAGA 2 cut(s) 1198, 1724
XmiI GTMKAC 1 cut(s) 93
XmnI GAANNNNTTC 1 cut(s) 1841
XspI CTAG 5 cut(s) 1199, 1473, 1545, 1725, 1827
ZrmI AGTACT 1 cut(s) 1195
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.