MD10G1055200.v1.1

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0008138
Physical Location & Seq
Forward (+)
7522255 .. 7523682
1428 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1055200.v1.1.491

Sequence Viewer

Length: 1428 bp
ATGTCCGTGATTGAAAGCTCGAAGCAACGGCATGTTGCTGTTCTTGCTTTTCCATTTGGCGGCCACGTTGAGCCCCTGCTTAACTTGGTATGCAGGCTAGCTAGCAGCACATCCCCAGATATGTGTTTTTCTTTCCTCAACTCAGAAAGATCAAATAACGTGCTATTTTCGGAGAAATCAGAATCCAACATTCCTAGCAACTTAAAACACTACAATGTGTCAGATGGTGTGCCGAAAAATCATGTCTTGAAAGGGCATCCAATGGAGGTAGTGGATCTATTCCTCAAGGCCACACCTGCAAATTACAAAATTGGAATAGAGAAGGCGGTGGCGGAGACAGGCAAGAAGGTTACTTGTTTGATTACAGATGCATTCTTGGTCTTTGCTGGAGAGATGGCTCAGAATTGGGGTGTTCCATGGATTCCTCTTTGGATACCCATGCCATGCAACCTGTCTGCTCACATTTACACTGATCTTATCCGCGGCGAGCTCTTTCCAAATTATGTTGGCCTCGAAAGTGATAACCAGATTGGTAATGACGACGATTGTTTGCACGAAGATAATACACTGGAAATTGTTCCAGGGCTGTCCGCAATGCATATTGCGGACTTGCCTGAAGAAGTAGTTCCATGTGACTCACTTTTGTCACAAATGCTAAGTCAAATGGGGCGAGTGCTGCATCAAATGACAGCTCTTGTCTTGAATTCCTATCAAGAGATAAATCCCACACTTCTGAATAACGATCTCAAATCAAAAGTCCCTAAGTTACTCAACGTAGGTTTTCTCACAGCCTCGTTACCAGCAGTCCCAATGGTTGCACCATCAAGTTCGGATGCCACGGGTTGCCTTTCGTGGTTAGATGAGCAACCAGCTTCGTCTGTGGCATATATCTGTTTTGGGACGATCGGCGCTCCATCTCCGAATGAGATGATAGCCTTGGCAGAGGCATTGGAAGTAAGCGGCGTATCATTTCTTTGGTCTCTCAAAGACAATTTTAAGGACCTATTGCCAAGCGGTTTTGTAGAAAAGATCACATACAAGCATGGAAAACTAGTGCCGTGGGCACCCCAAGCTCAAGTGTTGGCTCATACTGCAATCGGTATGTTTATTACGCACAGCGGGACAAATTCGGTGTATGAAAGTGTTGCAAATGGGGTGCCAATGATCTGCAGGCCATTATTCGGAGACCAAAGAATGAACGGGCGGATGGTGGACGATGTGTGGGGGATCGGAGTGAAAATTGAGGGCGGAATACTCACAAAGAGTGGAGTGCTCAAGAGCTTGGAGCTCGTTTTGGGAAGTGAACAAGGGAAGAAGATGAGGGAGAAGGCCAGAGCTCTCAAAGAGATTATAGCAGAGGCTGCTGGGCCTCTAGGGAGTGCTGTACAAGATTTTACAACTTTGGTGGACATAATTTCTTTGCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

476

Amino Acids

51.54

Weight (kDa)

5.33

Isoelectric Point (pI)

36.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 277 - 438 2.8e-33 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 304
Acc36I ACCTGC 1 cut(s) 304
AccB1I GGYRCC 2 cut(s) 1063, 1156
AccII CGCG 1 cut(s) 483
AclWI GGATC 2 cut(s) 282, 1235
AcoI YGGCCR 1 cut(s) 61
AcsI RAATTY 2 cut(s) 703, 1126
AcuI CTGAAG 1 cut(s) 636
AfaI GTAC 1 cut(s) 1386
AfiI CCNNNNNNNGG 2 cut(s) 59, 1181
AgsI TTSAA 3 cut(s) 14, 250, 703
AhlI ACTAGT 1 cut(s) 1051
AjnI CCWGG 1 cut(s) 580
AluBI AGCT 9 cut(s) 18, 101, 490, 692, 872, 1073, 1281, 1288, 1337
AluI AGCT 9 cut(s) 18, 101, 490, 692, 872, 1073, 1281, 1288, 1337
Alw21I GWGCWC 4 cut(s) 492, 1275, 1290, 1339
Alw26I GTCTC 3 cut(s) 329, 984, 1179
AlwI GGATC 2 cut(s) 282, 1235
AlwNI CAGNNNCTG 1 cut(s) 1361
AoxI GGCC 6 cut(s) 61, 288, 508, 1172, 1329, 1367
ApeKI GCWGC 3 cut(s) 105, 676, 1361
ApoI RAATTY 2 cut(s) 703, 1126
ArsI GACNNNNNNTTYG 4 cut(s) 643, 675, 741, 773
Asp700I GAANNNNTTC 2 cut(s) 576, 624
AspLEI GCGC 1 cut(s) 911
AspS9I GGNCC 2 cut(s) 1000, 1367
AsuNHI GCTAGC 2 cut(s) 97, 101
AvaII GGWCC 1 cut(s) 1000
BaeGI GKGCMC 1 cut(s) 1066
BanI GGYRCC 2 cut(s) 1063, 1156
BanII GRGCYC 4 cut(s) 75, 492, 1290, 1339
Bbv12I GWGCWC 4 cut(s) 492, 1275, 1290, 1339
BbvI GCAGC 3 cut(s) 117, 663, 1348
BccI CCATC 5 cut(s) 218, 388, 829, 922, 1201
BceAI ACGGC 2 cut(s) 44, 1042
BciT130I CCWGG 1 cut(s) 582
BciVI GTATCC 1 cut(s) 426
BcoDI GTCTC 3 cut(s) 329, 984, 1179
BcuI ACTAGT 1 cut(s) 1051
BfaI CTAG 5 cut(s) 98, 102, 195, 1052, 1373
BfmI CTRYAG 1 cut(s) 1168
BfoI RGCGCY 1 cut(s) 912
BfuAI ACCTGC 1 cut(s) 304
BfuI GTATCC 1 cut(s) 426
BisI GCNGC 6 cut(s) 61, 106, 484, 677, 961, 1362
BlsI GCNGC 6 cut(s) 62, 107, 485, 678, 962, 1363
Bme1390I CCNGG 1 cut(s) 582
Bme18I GGWCC 1 cut(s) 1000
BmgT120I GGNCC 2 cut(s) 1000, 1367
BmiI GGNNCC 2 cut(s) 1065, 1158
BmrFI CCNGG 1 cut(s) 582
BmsI GCATC 4 cut(s) 265, 358, 688, 823
BmtI GCTAGC 2 cut(s) 101, 105
BpmI CTGGAG 1 cut(s) 408
BpuEI CTTGAG 3 cut(s) 269, 1059, 1259
BsaI GGTCTC 2 cut(s) 984, 1179
BsaJI CCNNGG 6 cut(s) 416, 481, 581, 837, 936, 1058
Bsc4I CCNNNNNNNGG 2 cut(s) 59, 1181
Bse1I ACTGG 1 cut(s) 573
Bse3DI GCAATG 1 cut(s) 600
BseBI CCWGG 1 cut(s) 582
BseDI CCNNGG 6 cut(s) 416, 481, 581, 837, 936, 1058
BseGI GGATG 4 cut(s) 110, 256, 838, 1212
BseLI CCNNNNNNNGG 2 cut(s) 59, 1181
BseMI GCAATG 1 cut(s) 600
BseMII CTCAG 2 cut(s) 156, 413
BseNI ACTGG 1 cut(s) 573
BseSI GKGCMC 1 cut(s) 1066
BseXI GCAGC 3 cut(s) 117, 663, 1348
BseYI CCCAGC 1 cut(s) 1364
Bsh1236I CGCG 1 cut(s) 483
Bsh1285I CGRYCG 1 cut(s) 906
BshFI GGCC 6 cut(s) 63, 290, 510, 1174, 1331, 1369
BshNI GGYRCC 2 cut(s) 1063, 1156
BsiEI CGRYCG 1 cut(s) 906
BsiHKAI GWGCWC 4 cut(s) 492, 1275, 1290, 1339
BslFI GGGAC 4 cut(s) 743, 791, 913, 1135
BslI CCNNNNNNNGG 2 cut(s) 59, 1181
BsmAI GTCTC 3 cut(s) 329, 984, 1179
BsmFI GGGAC 4 cut(s) 743, 791, 913, 1135
BsmI GAATGC 1 cut(s) 371
BsnI GGCC 6 cut(s) 63, 290, 510, 1174, 1331, 1369
Bso31I GGTCTC 2 cut(s) 984, 1179
Bsp1286I GDGCHC 6 cut(s) 75, 492, 1066, 1275, 1290, 1339
Bsp1407I TGTACA 1 cut(s) 1384
Bsp143I GATC 8 cut(s) 149, 274, 472, 742, 903, 1029, 1164, 1227
Bsp19I CCATGG 1 cut(s) 416
BspANI GGCC 6 cut(s) 63, 290, 510, 1174, 1331, 1369
BspCNI CTCAG 2 cut(s) 155, 412
BspFNI CGCG 1 cut(s) 483
BspLI GGNNCC 2 cut(s) 1065, 1158
BspMAI CTGCAG 1 cut(s) 1172
BspMI ACCTGC 1 cut(s) 304
BspOI GCTAGC 2 cut(s) 101, 105
BspPI GGATC 2 cut(s) 282, 1235
BspT107I GGYRCC 2 cut(s) 1063, 1156
BspTNI GGTCTC 2 cut(s) 984, 1179
BsrDI GCAATG 1 cut(s) 600
BsrGI TGTACA 1 cut(s) 1384
BsrI ACTGG 1 cut(s) 573
BssECI CCNNGG 6 cut(s) 416, 481, 581, 837, 936, 1058
BssMI GATC 8 cut(s) 149, 274, 472, 742, 903, 1029, 1164, 1227
BssT1I CCWWGG 2 cut(s) 416, 936
Bst2UI CCWGG 1 cut(s) 582
BstAPI GCANNNNNTGC 1 cut(s) 1361
BstAUI TGTACA 1 cut(s) 1384
BstC8I GCNNGC 5 cut(s) 95, 99, 103, 488, 1172
BstDEI CTNAG 4 cut(s) 142, 399, 656, 762
BstDSI CCRYGG 4 cut(s) 416, 481, 837, 1058
BstF5I GGATG 4 cut(s) 110, 256, 838, 1212
BstFNI CGCG 1 cut(s) 483
BstH2I RGCGCY 1 cut(s) 912
BstHHI GCGC 1 cut(s) 911
BstKTI GATC 8 cut(s) 152, 277, 475, 745, 906, 1032, 1167, 1230
BstMAI GTCTC 3 cut(s) 329, 984, 1179
BstMBI GATC 8 cut(s) 149, 274, 472, 742, 903, 1029, 1164, 1227
BstMCI CGRYCG 1 cut(s) 906
BstMWI GCNNNNNNNGC 6 cut(s) 44, 296, 676, 1070, 1091, 1361
BstNI CCWGG 1 cut(s) 582
BstNSI RCATGY 1 cut(s) 35
BstSCI CCNGG 1 cut(s) 580
BstSFI CTRYAG 1 cut(s) 1168
BstSLI GKGCMC 1 cut(s) 1066
BstUI CGCG 1 cut(s) 483
BstV1I GCAGC 3 cut(s) 117, 663, 1348
BstX2I RGATCY 1 cut(s) 274
BstYI RGATCY 1 cut(s) 274
BsuI GTATCC 1 cut(s) 426
BsuRI GGCC 6 cut(s) 63, 290, 510, 1174, 1331, 1369
BtgI CCRYGG 4 cut(s) 416, 481, 837, 1058
BtsCI GGATG 4 cut(s) 110, 256, 838, 1212
BtsIMutI CAGTG 2 cut(s) 468, 566
BveI ACCTGC 1 cut(s) 304
Cac8I GCNNGC 5 cut(s) 95, 99, 103, 488, 1172
CaiI CAGNNNCTG 1 cut(s) 1361
CfoI GCGC 1 cut(s) 911
Cfr13I GGNCC 2 cut(s) 1000, 1367
Cfr42I CCGCGG 1 cut(s) 484
Csp6I GTAC 1 cut(s) 1385
CspCI CAANNNNNGTGG 2 cut(s) 1386, 1421
CviAII CATG 7 cut(s) 32, 242, 417, 439, 444, 630, 1043
CviQI GTAC 1 cut(s) 1385
DdeI CTNAG 4 cut(s) 142, 399, 656, 762
DpnI GATC 8 cut(s) 151, 276, 474, 744, 905, 1031, 1166, 1229
DpnII GATC 8 cut(s) 149, 274, 472, 742, 903, 1029, 1164, 1227
EaeI YGGCCR 1 cut(s) 61
EciI GGCGGA 3 cut(s) 347, 1219, 1263
Ecl136II GAGCTC 3 cut(s) 490, 1288, 1337
Eco130I CCWWGG 2 cut(s) 416, 936
Eco24I GRGCYC 4 cut(s) 75, 492, 1290, 1339
Eco31I GGTCTC 2 cut(s) 984, 1179
Eco47I GGWCC 1 cut(s) 1000
Eco53kI GAGCTC 3 cut(s) 490, 1288, 1337
Eco57I CTGAAG 1 cut(s) 636
EcoICRI GAGCTC 3 cut(s) 490, 1288, 1337
EcoO109I RGGNCCY 1 cut(s) 1000
EcoRI GAATTC 1 cut(s) 703
EcoRII CCWGG 1 cut(s) 580
EcoT14I CCWWGG 2 cut(s) 416, 936
EcoT22I ATGCAT 2 cut(s) 373, 600
EcoT38I GRGCYC 4 cut(s) 75, 492, 1290, 1339
ErhI CCWWGG 2 cut(s) 416, 936
FaeI CATG 7 cut(s) 35, 245, 420, 442, 447, 633, 1046
FaqI GGGAC 4 cut(s) 743, 791, 913, 1135
FatI CATG 7 cut(s) 31, 241, 416, 438, 443, 629, 1042
FauI CCCGC 1 cut(s) 1112
Fnu4HI GCNGC 6 cut(s) 61, 106, 484, 677, 961, 1362
FokI GGATG 4 cut(s) 97, 243, 845, 1219
FriOI GRGCYC 4 cut(s) 75, 492, 1290, 1339
Fsp4HI GCNGC 6 cut(s) 61, 106, 484, 677, 961, 1362
FspBI CTAG 5 cut(s) 98, 102, 195, 1052, 1373
GlaI GCGC 1 cut(s) 910
GluI GCNGC 6 cut(s) 61, 106, 484, 677, 961, 1362
GsaI CCCAGC 1 cut(s) 1368
GsuI CTGGAG 1 cut(s) 408
HaeII RGCGCY 1 cut(s) 912
HaeIII GGCC 6 cut(s) 63, 290, 510, 1174, 1331, 1369
HhaI GCGC 1 cut(s) 911
Hin1II CATG 7 cut(s) 35, 245, 420, 442, 447, 633, 1046
Hin6I GCGC 1 cut(s) 909
HinP1I GCGC 1 cut(s) 909
HinfI GANTC 3 cut(s) 182, 421, 635
Hpy166II GTNNAC 3 cut(s) 1213, 1304, 1408
Hpy188III TCNNGA 4 cut(s) 247, 700, 713, 1276
Hpy8I GTNNAC 3 cut(s) 1213, 1304, 1408
Hpy99I CGWCG 1 cut(s) 545
HpyAV CCTTC 3 cut(s) 316, 340, 1321
HpyCH4IV ACGT 3 cut(s) 66, 159, 774
HpyF10VI GCNNNNNNNGC 6 cut(s) 44, 296, 676, 1070, 1091, 1361
HpyF3I CTNAG 4 cut(s) 142, 399, 656, 762
HpySE526I ACGT 3 cut(s) 66, 159, 774
Hsp92II CATG 7 cut(s) 35, 245, 420, 442, 447, 633, 1046
HspAI GCGC 1 cut(s) 909
KspI CCGCGG 1 cut(s) 484
Kzo9I GATC 8 cut(s) 149, 274, 472, 742, 903, 1029, 1164, 1227
LmnI GCTCC 2 cut(s) 916, 1285
Lsp1109I GCAGC 3 cut(s) 117, 663, 1348
LweI GCATC 4 cut(s) 265, 358, 688, 823
MaeI CTAG 5 cut(s) 98, 102, 195, 1052, 1373
MaeII ACGT 3 cut(s) 66, 159, 774
MaeIII GTNAC 5 cut(s) 349, 632, 645, 765, 795
MalI GATC 8 cut(s) 151, 276, 474, 744, 905, 1031, 1166, 1229
MboI GATC 8 cut(s) 149, 274, 472, 742, 903, 1029, 1164, 1227
MboII GAAGA 4 cut(s) 569, 629, 1324, 1327
MflI RGATCY 1 cut(s) 274
MhlI GDGCHC 6 cut(s) 75, 492, 1066, 1275, 1290, 1339
MlyI GAGTC 1 cut(s) 629
MmeI TCCRAC 1 cut(s) 210
Mph1103I ATGCAT 2 cut(s) 373, 600
MroXI GAANNNNTTC 2 cut(s) 576, 624
MseI TTAA 3 cut(s) 81, 203, 996
MslI CAYNNNNRTG 1 cut(s) 213
MspA1I CMGCKG 2 cut(s) 483, 1119
MspR9I CCNGG 1 cut(s) 582
Mva1269I GAATGC 1 cut(s) 371
MvaI CCWGG 1 cut(s) 582
MvnI CGCG 1 cut(s) 483
MwoI GCNNNNNNNGC 6 cut(s) 44, 296, 676, 1070, 1091, 1361
NcoI CCATGG 1 cut(s) 416
NdeII GATC 8 cut(s) 149, 274, 472, 742, 903, 1029, 1164, 1227
NheI GCTAGC 2 cut(s) 97, 101
NlaIII CATG 7 cut(s) 35, 245, 420, 442, 447, 633, 1046
NlaIV GGNNCC 2 cut(s) 1065, 1158
NmuCI GTSAC 2 cut(s) 632, 645
NsiI ATGCAT 2 cut(s) 373, 600
NspI RCATGY 1 cut(s) 35
PaqCI CACCTGC 1 cut(s) 304
PctI GAATGC 1 cut(s) 371
PdmI GAANNNNTTC 2 cut(s) 576, 624
PfeI GAWTC 2 cut(s) 182, 421
PkrI GCNGC 6 cut(s) 62, 107, 485, 678, 962, 1363
Ple19I CGATCG 1 cut(s) 906
PleI GAGTC 1 cut(s) 629
PpsI GAGTC 1 cut(s) 629
PpuMI RGGWCCY 1 cut(s) 1000
Psp124BI GAGCTC 3 cut(s) 492, 1290, 1339
Psp5II RGGWCCY 1 cut(s) 1000
Psp6I CCWGG 1 cut(s) 580
PspFI CCCAGC 1 cut(s) 1364
PspGI CCWGG 1 cut(s) 580
PspN4I GGNNCC 2 cut(s) 1065, 1158
PspPI GGNCC 2 cut(s) 1000, 1367
PspPPI RGGWCCY 1 cut(s) 1000
PstI CTGCAG 1 cut(s) 1172
PstNI CAGNNNCTG 1 cut(s) 1361
PsuI RGATCY 1 cut(s) 274
PvuI CGATCG 1 cut(s) 906
RsaI GTAC 1 cut(s) 1386
RsaNI GTAC 1 cut(s) 1385
RseI CAYNNNNRTG 1 cut(s) 213
SacI GAGCTC 3 cut(s) 492, 1290, 1339
SacII CCGCGG 1 cut(s) 484
SaqAI TTAA 3 cut(s) 81, 203, 996
SatI GCNGC 6 cut(s) 61, 106, 484, 677, 961, 1362
Sau3AI GATC 8 cut(s) 149, 274, 472, 742, 903, 1029, 1164, 1227
Sau96I GGNCC 2 cut(s) 1000, 1367
SchI GAGTC 1 cut(s) 629
ScrFI CCNGG 1 cut(s) 582
SduI GDGCHC 6 cut(s) 75, 492, 1066, 1275, 1290, 1339
SfaNI GCATC 4 cut(s) 265, 358, 688, 823
SfcI CTRYAG 1 cut(s) 1168
Sfr303I CCGCGG 1 cut(s) 484
SgrBI CCGCGG 1 cut(s) 484
SinI GGWCC 1 cut(s) 1000
SmiMI CAYNNNNRTG 1 cut(s) 213
SmlI CTYRAG 3 cut(s) 284, 1074, 1274
SmoI CTYRAG 3 cut(s) 284, 1074, 1274
SpeI ACTAGT 1 cut(s) 1051
SspMI CTAG 5 cut(s) 98, 102, 195, 1052, 1373
SstI GAGCTC 3 cut(s) 492, 1290, 1339
StyD4I CCNGG 1 cut(s) 580
StyI CCWWGG 2 cut(s) 416, 936
TaiI ACGT 3 cut(s) 69, 162, 777
TaqI TCGA 2 cut(s) 20, 513
TatI WGTACW 1 cut(s) 1384
TauI GCSGC 3 cut(s) 63, 486, 963
TfiI GAWTC 2 cut(s) 182, 421
Tru1I TTAA 3 cut(s) 81, 203, 996
Tru9I TTAA 3 cut(s) 81, 203, 996
TscAI CASTG 2 cut(s) 475, 573
TseFI GTSAC 2 cut(s) 632, 645
TseI GCWGC 3 cut(s) 105, 676, 1361
Tsp45I GTSAC 2 cut(s) 632, 645
TspDTI ATGAA 2 cut(s) 1152, 1211
TspRI CASTG 2 cut(s) 475, 573
VpaK11BI GGWCC 1 cut(s) 1000
XapI RAATTY 2 cut(s) 703, 1126
XceI RCATGY 1 cut(s) 35
XmnI GAANNNNTTC 2 cut(s) 576, 624
XspI CTAG 5 cut(s) 98, 102, 195, 1052, 1373
Zsp2I ATGCAT 2 cut(s) 373, 600
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.