Rh7CG276900

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0008138
Physical Location & Seq
Reverse (-)
27837267 .. 27838529
1263 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG276900.1

Sequence Viewer

Length: 429 bp
ATGGCAGACACAAGCACGCAGATCAGTTGTCTAATAACAGATGGATTCTTGGTCTTTGGTAGCCAAATGGCTGAGAATTTGGATGTTCCATGGATTCCAATTTCGATACCCTTACCTTGCACCCTGTCTGCTCATATTTACACTGACGTTATCCGCCATTTATATGCAAATGATGGTGTTGATGGTCAAGGCAAAACCCTAGAAGTCATTCCGGGTTTGTCTACAATGCGCATCGAGGACTTACCAGAAGAAGTACTTCCCAGTGAATCTCTATTCTCGCACACGCTAAGACGAATTGGACTAGTCCTACCACAGTCCACAGCCGTTGTCATGAATTTCTATCAAGAACTAAACTCCACGCTCCTTGAAAGCGATCTCAAATCCAAGTTTCCCAAACTGCTCAATAGGGACTTATTTCTTGATTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

142

Amino Acids

15.81

Weight (kDa)

4.54

Isoelectric Point (pI)

50.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 427
Acc16I TGCGCA 1 cut(s) 230
AccI GTMKAC 1 cut(s) 221
AciI CCGC 1 cut(s) 154
AcsI RAATTY 2 cut(s) 76, 334
AfaI GTAC 1 cut(s) 255
AgsI TTSAA 1 cut(s) 368
AhlI ACTAGT 1 cut(s) 301
ApoI RAATTY 2 cut(s) 76, 334
Asp700I GAANNNNTTC 2 cut(s) 207, 255
AspLEI GCGC 1 cut(s) 231
AsuC2I CCSGG 1 cut(s) 213
BccI CCATC 3 cut(s) 35, 167, 176
BceAI ACGGC 1 cut(s) 308
BcnI CCSGG 1 cut(s) 213
BcuI ACTAGT 1 cut(s) 301
BfaI CTAG 2 cut(s) 200, 302
BmcAI AGTACT 1 cut(s) 255
Bme1390I CCNGG 1 cut(s) 213
BmrFI CCNGG 1 cut(s) 213
BmrI ACTGGG 1 cut(s) 255
BmsI GCATC 1 cut(s) 240
BmuI ACTGGG 1 cut(s) 255
BpuMI CCSGG 1 cut(s) 213
BsaJI CCNNGG 1 cut(s) 89
Bse1I ACTGG 1 cut(s) 261
BseDI CCNNGG 1 cut(s) 89
BseGI GGATG 1 cut(s) 88
BseMII CTCAG 1 cut(s) 63
BseNI ACTGG 1 cut(s) 261
BsiSI CCGG 1 cut(s) 212
BslFI GGGAC 1 cut(s) 422
BsmFI GGGAC 1 cut(s) 422
Bsp143I GATC 2 cut(s) 21, 373
Bsp19I CCATGG 1 cut(s) 89
BspACI CCGC 1 cut(s) 154
BspCNI CTCAG 1 cut(s) 64
BspHI TCATGA 1 cut(s) 330
BsrI ACTGG 1 cut(s) 261
BssECI CCNNGG 1 cut(s) 89
BssMI GATC 2 cut(s) 21, 373
BssT1I CCWWGG 1 cut(s) 89
Bst4CI ACNGT 1 cut(s) 315
BstC8I GCNNGC 1 cut(s) 17
BstDEI CTNAG 2 cut(s) 72, 287
BstDSI CCRYGG 1 cut(s) 89
BstF5I GGATG 1 cut(s) 88
BstHHI GCGC 1 cut(s) 231
BstKTI GATC 2 cut(s) 24, 376
BstMBI GATC 2 cut(s) 21, 373
BstSCI CCNGG 1 cut(s) 211
BtgI CCRYGG 1 cut(s) 89
BtsCI GGATG 1 cut(s) 88
BtsIMutI CAGTG 2 cut(s) 141, 268
Cac8I GCNNGC 1 cut(s) 17
CciI TCATGA 1 cut(s) 330
CfoI GCGC 1 cut(s) 231
Csp6I GTAC 1 cut(s) 254
CspCI CAANNNNNGTGG 4 cut(s) 307, 342, 346, 381
CviAII CATG 2 cut(s) 90, 331
CviJI RGCY 3 cut(s) 63, 71, 323
CviKI_1 RGCY 3 cut(s) 63, 71, 323
CviQI GTAC 1 cut(s) 254
DdeI CTNAG 2 cut(s) 72, 287
DpnI GATC 2 cut(s) 23, 375
DpnII GATC 2 cut(s) 21, 373
EciI GGCGGA 1 cut(s) 143
Eco130I CCWWGG 1 cut(s) 89
EcoT14I CCWWGG 1 cut(s) 89
ErhI CCWWGG 1 cut(s) 89
FaeI CATG 2 cut(s) 93, 334
FaiI YATR 6 cut(s) 91, 135, 163, 165, 332, 427
FalI AAGNNNNNCTT 2 cut(s) 240, 272
FaqI GGGAC 1 cut(s) 422
FatI CATG 2 cut(s) 89, 330
FblI GTMKAC 1 cut(s) 221
FokI GGATG 1 cut(s) 95
FspAI RTGCGCAY 1 cut(s) 230
FspBI CTAG 2 cut(s) 200, 302
FspI TGCGCA 1 cut(s) 230
GlaI GCGC 1 cut(s) 230
HapII CCGG 1 cut(s) 212
HhaI GCGC 1 cut(s) 231
Hin1II CATG 2 cut(s) 93, 334
Hin6I GCGC 1 cut(s) 229
HinP1I GCGC 1 cut(s) 229
HinfI GANTC 3 cut(s) 45, 94, 266
HpaII CCGG 1 cut(s) 212
Hpy166II GTNNAC 2 cut(s) 222, 318
Hpy188III TCNNGA 3 cut(s) 331, 344, 419
Hpy8I GTNNAC 2 cut(s) 222, 318
HpyCH4III ACNGT 1 cut(s) 315
HpyCH4IV ACGT 1 cut(s) 147
HpyCH4V TGCA 2 cut(s) 120, 167
HpyF3I CTNAG 2 cut(s) 72, 287
HpySE526I ACGT 1 cut(s) 147
Hsp92II CATG 2 cut(s) 93, 334
HspAI GCGC 1 cut(s) 229
Kzo9I GATC 2 cut(s) 21, 373
LmnI GCTCC 1 cut(s) 366
LpnPI CCDG 4 cut(s) 137, 225, 258, 274
LweI GCATC 1 cut(s) 240
MaeI CTAG 2 cut(s) 200, 302
MaeII ACGT 1 cut(s) 147
MalI GATC 2 cut(s) 23, 375
MboI GATC 2 cut(s) 21, 373
MboII GAAGA 1 cut(s) 260
MluCI AATT 4 cut(s) 76, 99, 294, 334
MnlI CCTC 1 cut(s) 229
MroXI GAANNNNTTC 2 cut(s) 207, 255
MslI CAYNNNNRTG 1 cut(s) 162
MspI CCGG 1 cut(s) 212
MspR9I CCNGG 1 cut(s) 213
NciI CCSGG 1 cut(s) 213
NcoI CCATGG 1 cut(s) 89
NdeII GATC 2 cut(s) 21, 373
NlaIII CATG 2 cut(s) 93, 334
NsbI TGCGCA 1 cut(s) 230
PagI TCATGA 1 cut(s) 330
PdmI GAANNNNTTC 2 cut(s) 207, 255
PfeI GAWTC 3 cut(s) 45, 94, 266
PsiI TTATAA 1 cut(s) 427
RsaI GTAC 1 cut(s) 255
RsaNI GTAC 1 cut(s) 254
RseI CAYNNNNRTG 1 cut(s) 162
Sau3AI GATC 2 cut(s) 21, 373
ScaI AGTACT 1 cut(s) 255
ScrFI CCNGG 1 cut(s) 213
SetI ASST 2 cut(s) 118, 150
SfaNI GCATC 1 cut(s) 240
SmiMI CAYNNNNRTG 1 cut(s) 162
SpeI ACTAGT 1 cut(s) 301
Sse9I AATT 4 cut(s) 76, 99, 294, 334
SsiI CCGC 1 cut(s) 154
SspMI CTAG 2 cut(s) 200, 302
StyD4I CCNGG 1 cut(s) 211
StyI CCWWGG 1 cut(s) 89
TaaI ACNGT 1 cut(s) 315
TaiI ACGT 1 cut(s) 150
TaqI TCGA 2 cut(s) 104, 234
TasI AATT 4 cut(s) 76, 99, 294, 334
TatI WGTACW 1 cut(s) 253
TfiI GAWTC 3 cut(s) 45, 94, 266
TscAI CASTG 2 cut(s) 148, 268
TspDTI ATGAA 1 cut(s) 347
TspRI CASTG 2 cut(s) 148, 268
XapI RAATTY 2 cut(s) 76, 334
XmiI GTMKAC 1 cut(s) 221
XmnI GAANNNNTTC 2 cut(s) 207, 255
XspI CTAG 2 cut(s) 200, 302
ZrmI AGTACT 1 cut(s) 255
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.