Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0006975

Physical Location & Seq

Genomic Coordinates Reverse (-)

27070158 .. 27073423

Gene Structure 3266 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1176900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1665 bp

ATGGATGATTTCATTTCTCCAACCTACAAATTTATTAACACCATATTGGCTTTGCTGCTGGTTCTCTATGGTACATTGAGAATAATCGCAGTATACACTAAGCAAAAGAAGAAGAGCAATATCACCAACAACACGAAGACAGAAACCATGTCATTGACCAAAGTCCCTCAACCCTCAGAAGCATGGCCTTTCATAGGTCACCTCCATCTCCTACATGGCAAAGACCCTGTTGCCCTAATCCTTGGCGCCATGGCAGATAAACTCGGTCCGATCTACTCACTCAGGCTTGGTCCGCGCCAAGTAGTGGTGGTGCTGAGCGCTTGGGAACAAGTAAAAGAACGCTTCACAAAAAACGACATTGTTTTCGCCACACGACCGAGTACAGCAGCCGGCAAACACTTGGGTTACAACAACGCCATTTTTGCCCTAGCCCCGTACGGATCCTACTGGCGCGACATCCGGAAGTTGGCTACTCAGGAGTTTCTCTCAGCCCAAAAAGTTGAAATGCTTAGTCACGTCCGAGCTGAAGAAGTTGACTCGTTTATAAAGAAATTGTTCGACGTAGCGGGGTCATCGGGCCTCACCATAACTCCCGCCACTTCACCAGTAGCGGTGCGTTTGAGCGAGTTAGTAGAGCACTTGATGTTCAACATTAGCGTGAGGCTAATTGCGGGCAAGAGATTTTCAGATCGCGAATACAATGAGAAAGGCAGTGAGGCTTGGCGTTTTGAAAAGGCTATGCAGGATACTATGCATCGCCTTGGCAATTTTGTTTGGTCGGATGCTATACCATTTCTTGAATGGCTGGACAGCTTGTTTGGGCCTGTGAGTTCAATGAAACATACGTTTAAGGAACTTGACTCTGTGCTTAGCAGCTGGCTCAACGAACATCGTTCTCCAGGAGGCAAGATCGGTAATAGCAGCAGGGTCGCAAGTGACTTGATGGATGCGATGATATCCAACTTTGGAGAGAAGGCTGTCATTTCTGGCCATAGCTGTGATAACGTCATCAAAGCAACATCACTTATTCTCATCATAGGTGGCACAGATGGCACATCTATTGCAGTAACATGGGCACTCTCCTTGCTACTCAACCACCCAAGTGCCCTAAAATCTGCCCAACAAGAACTGGACATCAGCGTAGGAAGGGATAGATGGGTTCAAGAATCCGACCTCCCAAACCTCAAATACCTCCAAGCCATTGTCAAAGAAACCCTACGCTTATACCCATCTATCCCAATCACCGTCAACGAGGGCATGGAAGACACTCATCTCTCTGGCTACCTCGTCCCCAAAGGCACCCGTATAGTGGTCAACTTATGGAAATTGCACCGGGACCCGCGCGTGTGGGCCAACCCTTGTGAATTTCACCCTGAAAGGTTTATGACCGACCATGCTGACGTGGACTATTTCAAGGGTTTTGAGTACATTCCGTTTAGCTCGGGCAGAAGGTTGTGCCCTGGTGCGACACTAGGGTTGCATGTGGTTCAGTTGGTTCTGGCTCGTTTGGTTCAGGGGTTTGATATGAGCAGAGTGGGTGATGAGCCGGTGGATATGCGTGAAAGGGTGGGTCTTGCCCTTATGAAAGAAAATCCACTTGACGCTTTTCTTGCTCCACGCCTTCCTCTTCACCTCTACTGTTCTGCTGAACGACAGTGTATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0006629 GO:0006720 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009987 GO:0010035 GO:0010038 GO:0010039 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0042214 GO:0042221 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044550 GO:0046246 GO:0050896 GO:0051716 GO:0055114 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071704 GO:0097007 GO:0097008 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00904 map00904

Pfam Domains

Protein Families

p450

Protein Analysis

555

Amino Acids

62.09

Weight (kDa)

8.4

Isoelectric Point (pI)

29.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	56 - 529	1.2e-83	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006975)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G25180
malus_domestica	MD05G1169600.v1.1 MD05G1189900.v1.1 MD10G1157900.v1.1 MD10G1158100.v1.1 MD10G1176900.v1.1 MD10G1177100.v1.1
prunus_persica	Prupe.8G196800_v2.0.a1 Prupe.8G196900_v2.0.a1 Prupe.8G197000_v2.0.a1
pyrus_communis	pycom05g15710 pycom05g17500 pycom10g13610 pycom10g13620 pycom10g13630 pycom10g13660 pycom10g13670 pycom10g15440
rosa_chinensis	RchiOBHm_Chr6g0283821
rosa_laevigata	RLG00000012794
rosa_multiflora	Rmu_sc0001521.1_g000036
rosa_roxburghii	Rroxscaffold_7G00185160
rosa_rugosa	Rorug06G0158000
rosa_samantha	Rh6CG272900
rosa_wichuraiana	Rw6G023340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	545
AccB1I	GGYRCC	2 cut(s)	245, 1298
AccB7I	CCANNNNNTGG	1 cut(s)	304
AccI	GTMKAC	1 cut(s)	93
AccII	CGCG	5 cut(s)	295, 453, 693, 1342, 1344
AccIII	TCCGGA	1 cut(s)	459
AciI	CCGC	6 cut(s)	293, 566, 594, 611, 671, 1340
AclWI	GGATC	2 cut(s)	435, 448
AcoI	YGGCCR	1 cut(s)	988
AcsI	RAATTY	2 cut(s)	29, 1364
AcuI	CTGAAG	1 cut(s)	546
AcyI	GRCGYC	1 cut(s)	246
AfaI	GTAC	4 cut(s)	73, 382, 437, 1427
AfeI	AGCGCT	1 cut(s)	319
AfiI	CCNNNNNNNGG	4 cut(s)	194, 304, 466, 1309
AgsI	TTSAA	7 cut(s)	503, 649, 731, 800, 834, 1163, 1414
AjiI	CACGTC	2 cut(s)	517, 1402
AjnI	CCWGG	2 cut(s)	898, 1459
AleI	CACNNNNGTG	1 cut(s)	1101
AluBI	AGCT	5 cut(s)	524, 813, 876, 996, 1440
AluI	AGCT	5 cut(s)	524, 813, 876, 996, 1440
Alw21I	GWGCWC	1 cut(s)	639
AlwI	GGATC	2 cut(s)	435, 448
Ama87I	CYCGRG	1 cut(s)	1441
Aor13HI	TCCGGA	1 cut(s)	459
Aor51HI	AGCGCT	1 cut(s)	319
AoxI	GGCC	5 cut(s)	185, 577, 821, 988, 1350
ApeKI	GCWGC	4 cut(s)	55, 386, 873, 921
ApoI	RAATTY	2 cut(s)	29, 1364
ArsI	GACNNNNNNTTYG	4 cut(s)	347, 379, 800, 832
Asp700I	GAANNNNTTC	1 cut(s)	554
AspLEI	GCGC	5 cut(s)	248, 297, 320, 453, 1344
AspS9I	GGNCC	6 cut(s)	266, 290, 577, 821, 1336, 1350
AsuC2I	CCSGG	1 cut(s)	1334
AsuHPI	GGTGA	8 cut(s)	115, 191, 574, 594, 1234, 1361, 1550, 1622
AvaI	CYCGRG	1 cut(s)	1441
AvaII	GGWCC	3 cut(s)	266, 290, 1336
BaeGI	GKGCMC	3 cut(s)	1078, 1108, 1460
BalI	TGGCCA	1 cut(s)	990
BamHI	GGATCC	1 cut(s)	440
BanI	GGYRCC	2 cut(s)	245, 1298
BbsI	GAAGAC	2 cut(s)	143, 1269
Bbv12I	GWGCWC	1 cut(s)	639
BbvI	GCAGC	4 cut(s)	42, 398, 885, 933
BccI	CCATC	5 cut(s)	213, 937, 1043, 1149, 1237
BcgI	CGANNNNNNTGC	2 cut(s)	910, 944
BciT130I	CCWGG	2 cut(s)	900, 1461
BciVI	GTATCC	1 cut(s)	739
BcnI	CCSGG	1 cut(s)	1334
BfaI	CTAG	2 cut(s)	428, 1472
BfoI	RGCGCY	2 cut(s)	249, 321
BfuI	GTATCC	1 cut(s)	739
BisI	GCNGC	4 cut(s)	56, 387, 874, 922
BlpI	GCTNAGC	2 cut(s)	314, 869
BlsI	GCNGC	4 cut(s)	57, 388, 875, 923
Bme1390I	CCNGG	3 cut(s)	900, 1334, 1461
Bme18I	GGWCC	3 cut(s)	266, 290, 1336
BmeT110I	CYCGRG	1 cut(s)	1441
BmgBI	CACGTC	2 cut(s)	517, 1402
BmgT120I	GGNCC	6 cut(s)	266, 290, 577, 821, 1336, 1350
BmiI	GGNNCC	5 cut(s)	247, 442, 1300, 1337, 1338
BmrFI	CCNGG	3 cut(s)	900, 1334, 1461
BmsI	GCATC	3 cut(s)	763, 772, 937
BoxI	GACNNNNGTC	1 cut(s)	161
BpiI	GAAGAC	2 cut(s)	143, 1269
BplI	GAGNNNNNCTC	2 cut(s)	470, 502
BpmI	CTGGAG	1 cut(s)	882
Bpu1102I	GCTNAGC	2 cut(s)	314, 869
BpuMI	CCSGG	1 cut(s)	1334
BsaHI	GRCGYC	1 cut(s)	246
BsaJI	CCNNGG	4 cut(s)	241, 249, 760, 1459
BsaWI	WCCGGW	1 cut(s)	459
BsaXI	ACNNNNNCTCC	2 cut(s)	574, 604
Bsc4I	CCNNNNNNNGG	4 cut(s)	194, 304, 466, 1309
Bse118I	RCCGGY	2 cut(s)	389, 1546
Bse1I	ACTGG	3 cut(s)	452, 605, 1134
BseAI	TCCGGA	1 cut(s)	459
BseBI	CCWGG	2 cut(s)	900, 1461
BseDI	CCNNGG	4 cut(s)	241, 249, 760, 1459
BseGI	GGATG	4 cut(s)	10, 456, 787, 952
BseLI	CCNNNNNNNGG	4 cut(s)	194, 304, 466, 1309
BseMII	CTCAG	5 cut(s)	189, 295, 305, 488, 501
BseNI	ACTGG	3 cut(s)	452, 605, 1134
BseSI	GKGCMC	3 cut(s)	1078, 1108, 1460
BseXI	GCAGC	4 cut(s)	42, 398, 885, 933
Bsh1236I	CGCG	5 cut(s)	295, 453, 693, 1342, 1344
Bsh1285I	CGRYCG	1 cut(s)	377
BshFI	GGCC	5 cut(s)	187, 579, 823, 990, 1352
BshNI	GGYRCC	2 cut(s)	245, 1298
BsiEI	CGRYCG	1 cut(s)	377
BsiHKAI	GWGCWC	1 cut(s)	639
BsiHKCI	CYCGRG	1 cut(s)	1441
BsiSI	CCGG	4 cut(s)	390, 460, 1333, 1547
BsiWI	CGTACG	1 cut(s)	435
BslFI	GGGAC	3 cut(s)	149, 1274, 1349
BslI	CCNNNNNNNGG	4 cut(s)	194, 304, 466, 1309
BsmFI	GGGAC	3 cut(s)	149, 1274, 1349
BsnI	GGCC	5 cut(s)	187, 579, 823, 990, 1352
BsoBI	CYCGRG	1 cut(s)	1441
Bsp1286I	GDGCHC	4 cut(s)	639, 1078, 1108, 1460
Bsp13I	TCCGGA	1 cut(s)	459
Bsp143I	GATC	4 cut(s)	270, 440, 688, 909
Bsp1720I	GCTNAGC	2 cut(s)	314, 869
Bsp19I	CCATGG	1 cut(s)	249
Bsp68I	TCGCGA	1 cut(s)	693
BspACI	CCGC	6 cut(s)	293, 566, 594, 611, 671, 1340
BspANI	GGCC	5 cut(s)	187, 579, 823, 990, 1352
BspCNI	CTCAG	5 cut(s)	188, 294, 306, 487, 500
BspEI	TCCGGA	1 cut(s)	459
BspFNI	CGCG	5 cut(s)	295, 453, 693, 1342, 1344
BspLI	GGNNCC	5 cut(s)	247, 442, 1300, 1337, 1338
BspPI	GGATC	2 cut(s)	435, 448
BspQI	GCTCTTC	1 cut(s)	107
BspT107I	GGYRCC	2 cut(s)	245, 1298
BsrFI	RCCGGY	2 cut(s)	389, 1546
BsrI	ACTGG	3 cut(s)	452, 605, 1134
BssAI	RCCGGY	2 cut(s)	389, 1546
BssECI	CCNNGG	4 cut(s)	241, 249, 760, 1459
BssMI	GATC	4 cut(s)	270, 440, 688, 909
BssNAI	GTATAC	1 cut(s)	94
BssNI	GRCGYC	1 cut(s)	246
BssT1I	CCWWGG	3 cut(s)	241, 249, 760
Bst1107I	GTATAC	1 cut(s)	94
Bst2UI	CCWGG	2 cut(s)	900, 1461
Bst4CI	ACNGT	3 cut(s)	1246, 1640, 1656
Bst6I	CTCTTC	2 cut(s)	107, 1632
BstACI	GRCGYC	1 cut(s)	246
BstC8I	GCNNGC	3 cut(s)	391, 673, 878
BstDEI	CTNAG	8 cut(s)	99, 175, 281, 314, 474, 487, 509, 869
BstDSI	CCRYGG	1 cut(s)	249
BstEII	GGTNACC	1 cut(s)	197
BstENI	CCTNNNNNAGG	1 cut(s)	192
BstF5I	GGATG	4 cut(s)	10, 456, 787, 952
BstFNI	CGCG	5 cut(s)	295, 453, 693, 1342, 1344
BstH2I	RGCGCY	2 cut(s)	249, 321
BstHHI	GCGC	5 cut(s)	248, 297, 320, 453, 1344
BstKTI	GATC	4 cut(s)	273, 443, 691, 912
BstMBI	GATC	4 cut(s)	270, 440, 688, 909
BstMCI	CGRYCG	1 cut(s)	377
BstMWI	GCNNNNNNNGC	4 cut(s)	292, 422, 1050, 1610
BstNI	CCWGG	2 cut(s)	900, 1461
BstNSI	RCATGY	1 cut(s)	1484
BstPAI	GACNNNNGTC	1 cut(s)	161
BstPI	GGTNACC	1 cut(s)	197
BstSCI	CCNGG	3 cut(s)	898, 1332, 1459
BstSLI	GKGCMC	3 cut(s)	1078, 1108, 1460
BstUI	CGCG	5 cut(s)	295, 453, 693, 1342, 1344
BstV1I	GCAGC	4 cut(s)	42, 398, 885, 933
BstV2I	GAAGAC	2 cut(s)	143, 1269
BstX2I	RGATCY	1 cut(s)	440
BstYI	RGATCY	1 cut(s)	440
BstZ17I	GTATAC	1 cut(s)	94
BsuI	GTATCC	1 cut(s)	739
BsuRI	GGCC	5 cut(s)	187, 579, 823, 990, 1352
BtgI	CCRYGG	1 cut(s)	249
BtgZI	GCGATG	2 cut(s)	740, 965
BtrI	CACGTC	2 cut(s)	517, 1402
BtsCI	GGATG	4 cut(s)	10, 456, 787, 952
BtsI	GCAGTG	1 cut(s)	718
BtsIMutI	CAGTG	2 cut(s)	718, 1661
BtuMI	TCGCGA	1 cut(s)	693
Cac8I	GCNNGC	3 cut(s)	391, 673, 878
CfoI	GCGC	5 cut(s)	248, 297, 320, 453, 1344
Cfr10I	RCCGGY	2 cut(s)	389, 1546
Cfr13I	GGNCC	6 cut(s)	266, 290, 577, 821, 1336, 1350
CpoI	CGGWCCG	1 cut(s)	266
CseI	GACGC	1 cut(s)	1610
Csp6I	GTAC	4 cut(s)	72, 381, 436, 1426
CspI	CGGWCCG	1 cut(s)	266
CviAII	CATG	8 cut(s)	148, 183, 215, 250, 1071, 1258, 1394, 1481
CviQI	GTAC	4 cut(s)	72, 381, 436, 1426
DdeI	CTNAG	8 cut(s)	99, 175, 281, 314, 474, 487, 509, 869
DinI	GGCGCC	1 cut(s)	247
DpnI	GATC	4 cut(s)	272, 442, 690, 911
DpnII	GATC	4 cut(s)	270, 440, 688, 909
EaeI	YGGCCR	1 cut(s)	988
Eam1104I	CTCTTC	2 cut(s)	107, 1632
EarI	CTCTTC	2 cut(s)	107, 1632
Eco130I	CCWWGG	3 cut(s)	241, 249, 760
Eco32I	GATATC	1 cut(s)	957
Eco47I	GGWCC	3 cut(s)	266, 290, 1336
Eco47III	AGCGCT	1 cut(s)	319
Eco57I	CTGAAG	1 cut(s)	546
Eco88I	CYCGRG	1 cut(s)	1441
Eco91I	GGTNACC	1 cut(s)	197
EcoNI	CCTNNNNNAGG	1 cut(s)	192
EcoO109I	RGGNCCY	1 cut(s)	1336
EcoO65I	GGTNACC	1 cut(s)	197
EcoRII	CCWGG	2 cut(s)	898, 1459
EcoRV	GATATC	1 cut(s)	957
EcoT14I	CCWWGG	3 cut(s)	241, 249, 760
EcoT22I	ATGCAT	1 cut(s)	756
EgeI	GGCGCC	1 cut(s)	247
EheI	GGCGCC	1 cut(s)	247
ErhI	CCWWGG	3 cut(s)	241, 249, 760
FaeI	CATG	8 cut(s)	151, 186, 218, 253, 1074, 1261, 1397, 1484
FaqI	GGGAC	3 cut(s)	149, 1274, 1349
FatI	CATG	8 cut(s)	147, 182, 214, 249, 1070, 1257, 1393, 1480
FauI	CCCGC	4 cut(s)	559, 601, 664, 1347
FblI	GTMKAC	1 cut(s)	93
Fnu4HI	GCNGC	4 cut(s)	56, 387, 874, 922
FokI	GGATG	4 cut(s)	17, 443, 794, 959
Fsp4HI	GCNGC	4 cut(s)	56, 387, 874, 922
FspBI	CTAG	2 cut(s)	428, 1472
GlaI	GCGC	5 cut(s)	247, 296, 319, 452, 1343
GluI	GCNGC	4 cut(s)	56, 387, 874, 922
GsuI	CTGGAG	1 cut(s)	882
HaeII	RGCGCY	2 cut(s)	249, 321
HaeIII	GGCC	5 cut(s)	187, 579, 823, 990, 1352
HapII	CCGG	4 cut(s)	390, 460, 1333, 1547
HgaI	GACGC	1 cut(s)	1610
HhaI	GCGC	5 cut(s)	248, 297, 320, 453, 1344
Hin1I	GRCGYC	1 cut(s)	246
Hin1II	CATG	8 cut(s)	151, 186, 218, 253, 1074, 1261, 1397, 1484
Hin6I	GCGC	5 cut(s)	246, 295, 318, 451, 1342
HinP1I	GCGC	5 cut(s)	246, 295, 318, 451, 1342
HincII	GTYRAC	3 cut(s)	535, 1249, 1315
HindII	GTYRAC	3 cut(s)	535, 1249, 1315
HinfI	GANTC	3 cut(s)	536, 860, 1166
HpaII	CCGG	4 cut(s)	390, 460, 1333, 1547
HphI	GGTGA	8 cut(s)	115, 191, 574, 594, 1234, 1361, 1550, 1622
Hpy166II	GTNNAC	5 cut(s)	94, 535, 1249, 1315, 1405
Hpy188I	TCNGA	6 cut(s)	178, 270, 521, 688, 781, 1171
Hpy188III	TCNNGA	5 cut(s)	460, 476, 692, 797, 1163
Hpy8I	GTNNAC	5 cut(s)	94, 535, 1249, 1315, 1405
Hpy99I	CGWCG	1 cut(s)	563
HpyAV	CCTTC	4 cut(s)	967, 1140, 1443, 1631
HpyCH4III	ACNGT	3 cut(s)	1246, 1640, 1656
HpyCH4IV	ACGT	5 cut(s)	516, 561, 845, 1005, 1401
HpyCH4V	TGCA	5 cut(s)	742, 754, 1064, 1330, 1480
HpyF10VI	GCNNNNNNNGC	4 cut(s)	292, 422, 1050, 1610
HpyF3I	CTNAG	8 cut(s)	99, 175, 281, 314, 474, 487, 509, 869
HpySE526I	ACGT	5 cut(s)	516, 561, 845, 1005, 1401
Hsp92I	GRCGYC	1 cut(s)	246
Hsp92II	CATG	8 cut(s)	151, 186, 218, 253, 1074, 1261, 1397, 1484
HspAI	GCGC	5 cut(s)	246, 295, 318, 451, 1342
KasI	GGCGCC	1 cut(s)	245
KflI	GGGWCCC	1 cut(s)	1336
Kpn2I	TCCGGA	1 cut(s)	459
KroI	GCCGGC	1 cut(s)	389
KroNI	GCCGGC	1 cut(s)	391
Kzo9I	GATC	4 cut(s)	270, 440, 688, 909
LguI	GCTCTTC	1 cut(s)	107
LmnI	GCTCC	1 cut(s)	1618
Lsp1109I	GCAGC	4 cut(s)	42, 398, 885, 933
LweI	GCATC	3 cut(s)	763, 772, 937
MaeI	CTAG	2 cut(s)	428, 1472
MaeII	ACGT	5 cut(s)	516, 561, 845, 1005, 1401
MaeIII	GTNAC	5 cut(s)	197, 404, 512, 935, 1066
MalI	GATC	4 cut(s)	272, 442, 690, 911
MboI	GATC	4 cut(s)	270, 440, 688, 909
MboII	GAAGA	6 cut(s)	121, 124, 148, 539, 1274, 1619
MflI	RGATCY	1 cut(s)	440
MhlI	GDGCHC	4 cut(s)	639, 1078, 1108, 1460
MlsI	TGGCCA	1 cut(s)	990
MluCI	AATT	6 cut(s)	29, 551, 666, 766, 1325, 1364
MluNI	TGGCCA	1 cut(s)	990
Mly113I	GGCGCC	1 cut(s)	246
MlyI	GAGTC	2 cut(s)	530, 854
MmeI	TCCRAC	4 cut(s)	44, 759, 984, 1194
Mox20I	TGGCCA	1 cut(s)	990
Mph1103I	ATGCAT	1 cut(s)	756
MroI	TCCGGA	1 cut(s)	459
MroNI	GCCGGC	1 cut(s)	389
MroXI	GAANNNNTTC	1 cut(s)	554
MscI	TGGCCA	1 cut(s)	990
MseI	TTAA	3 cut(s)	36, 849, 1663
MslI	CAYNNNNRTG	3 cut(s)	656, 996, 1101
Msp20I	TGGCCA	1 cut(s)	990
MspA1I	CMGCKG	1 cut(s)	876
MspI	CCGG	4 cut(s)	390, 460, 1333, 1547
MspR9I	CCNGG	3 cut(s)	900, 1334, 1461
MvaI	CCWGG	2 cut(s)	900, 1461
MvnI	CGCG	5 cut(s)	295, 453, 693, 1342, 1344
MwoI	GCNNNNNNNGC	4 cut(s)	292, 422, 1050, 1610
NaeI	GCCGGC	1 cut(s)	391
NarI	GGCGCC	1 cut(s)	246
NciI	CCSGG	1 cut(s)	1334
NcoI	CCATGG	1 cut(s)	249
NdeII	GATC	4 cut(s)	270, 440, 688, 909
NgoMIV	GCCGGC	1 cut(s)	389
NlaIII	CATG	8 cut(s)	151, 186, 218, 253, 1074, 1261, 1397, 1484
NlaIV	GGNNCC	5 cut(s)	247, 442, 1300, 1337, 1338
NmuCI	GTSAC	3 cut(s)	197, 512, 935
NruI	TCGCGA	1 cut(s)	693
NsiI	ATGCAT	1 cut(s)	756
NspI	RCATGY	1 cut(s)	1484
OliI	CACNNNNGTG	1 cut(s)	1101
PciSI	GCTCTTC	1 cut(s)	107
PdiI	GCCGGC	1 cut(s)	391
PdmI	GAANNNNTTC	1 cut(s)	554
PfeI	GAWTC	1 cut(s)	1166
Pfl23II	CGTACG	1 cut(s)	435
PflMI	CCANNNNNTGG	1 cut(s)	304
PfoI	TCCNGGA	1 cut(s)	898
PkrI	GCNGC	4 cut(s)	57, 388, 875, 923
PleI	GAGTC	2 cut(s)	530, 854
PluTI	GGCGCC	1 cut(s)	249
PpsI	GAGTC	2 cut(s)	530, 854
PpuMI	RGGWCCY	1 cut(s)	1336
PshAI	GACNNNNGTC	1 cut(s)	161
PsiI	TTATAA	1 cut(s)	545
Psp5II	RGGWCCY	1 cut(s)	1336
Psp6I	CCWGG	2 cut(s)	898, 1459
PspEI	GGTNACC	1 cut(s)	197
PspGI	CCWGG	2 cut(s)	898, 1459
PspLI	CGTACG	1 cut(s)	435
PspN4I	GGNNCC	5 cut(s)	247, 442, 1300, 1337, 1338
PspPI	GGNCC	6 cut(s)	266, 290, 577, 821, 1336, 1350
PspPPI	RGGWCCY	1 cut(s)	1336
PsuI	RGATCY	1 cut(s)	440
PvuII	CAGCTG	1 cut(s)	876
RruI	TCGCGA	1 cut(s)	693
RsaI	GTAC	4 cut(s)	73, 382, 437, 1427
RsaNI	GTAC	4 cut(s)	72, 381, 436, 1426
RseI	CAYNNNNRTG	3 cut(s)	656, 996, 1101
Rsr2I	CGGWCCG	1 cut(s)	266
RsrII	CGGWCCG	1 cut(s)	266
SapI	GCTCTTC	1 cut(s)	107
SaqAI	TTAA	3 cut(s)	36, 849, 1663
SatI	GCNGC	4 cut(s)	56, 387, 874, 922
Sau3AI	GATC	4 cut(s)	270, 440, 688, 909
Sau96I	GGNCC	6 cut(s)	266, 290, 577, 821, 1336, 1350
SchI	GAGTC	2 cut(s)	530, 854
ScrFI	CCNGG	3 cut(s)	900, 1334, 1461
SduI	GDGCHC	4 cut(s)	639, 1078, 1108, 1460
SfaNI	GCATC	3 cut(s)	763, 772, 937
SfoI	GGCGCC	1 cut(s)	247
SinI	GGWCC	3 cut(s)	266, 290, 1336
SmiMI	CAYNNNNRTG	3 cut(s)	656, 996, 1101
Sse9I	AATT	6 cut(s)	29, 551, 666, 766, 1325, 1364
SsiI	CCGC	6 cut(s)	293, 566, 594, 611, 671, 1340
SspDI	GGCGCC	1 cut(s)	245
SspMI	CTAG	2 cut(s)	428, 1472
StyD4I	CCNGG	3 cut(s)	898, 1332, 1459
StyI	CCWWGG	3 cut(s)	241, 249, 760
TaaI	ACNGT	3 cut(s)	1246, 1640, 1656
TaiI	ACGT	5 cut(s)	519, 564, 848, 1008, 1404
TaqI	TCGA	1 cut(s)	558
TaqII	GACCGA	3 cut(s)	254, 391, 1403
TasI	AATT	6 cut(s)	29, 551, 666, 766, 1325, 1364
TatI	WGTACW	2 cut(s)	380, 1425
TfiI	GAWTC	1 cut(s)	1166
Tru1I	TTAA	3 cut(s)	36, 849, 1663
Tru9I	TTAA	3 cut(s)	36, 849, 1663
TscAI	CASTG	2 cut(s)	718, 1661
TseFI	GTSAC	3 cut(s)	197, 512, 935
TseI	GCWGC	4 cut(s)	55, 386, 873, 921
Tsp45I	GTSAC	3 cut(s)	197, 512, 935
TspDTI	ATGAA	3 cut(s)	181, 851, 1598
TspGWI	ACGGA	2 cut(s)	453, 1422
TspRI	CASTG	2 cut(s)	718, 1661
Van91I	CCANNNNNTGG	1 cut(s)	304
VpaK11BI	GGWCC	3 cut(s)	266, 290, 1336
XagI	CCTNNNNNAGG	1 cut(s)	192
XapI	RAATTY	2 cut(s)	29, 1364
XceI	RCATGY	1 cut(s)	1484
XcmI	CCANNNNNNNNNTGG	2 cut(s)	212, 798
XmiI	GTMKAC	1 cut(s)	93
XmnI	GAANNNNTTC	1 cut(s)	554
XspI	CTAG	2 cut(s)	428, 1472
Zsp2I	ATGCAT	1 cut(s)	756

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.