Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0006975

Physical Location & Seq

Genomic Coordinates Forward (+)

24586365 .. 24589223

Gene Structure 2859 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00185160.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1599 bp

ATGGATGTTATTTCTCCAATCCAAATTCTTCATACAATCTTGGCCTTGTTTATTCTCTACGGCGCTTGGAGAATCGCAACAAGCATTAGAAAGACCAACACCAAAAAGATCAGCAAAGTTCCCGAGCCCTCCGGTGCATGGCCATTTATAGGCCACCTCCACCTTCTCGGGAGGACCCAAGACCCAATTGCCGTAATACTTGGAGCCCTAGCTGATAAACACGGACCAATCTACTCACTCAAGCTTGGTTTGCACAACCTGGTGGTGGTGAGCGGTTGGGAGCTCGTAAAAGAATGCCTCGCAAAAAACGACAGGGTTTTCGCTACGCGACCGAGCATCACAGGCGGCAAGTACTTGGGTTACAACAGTGCCATCTTCTCTCTAGCCCCGTACGGACAGTACTGGCGTGACGTCCGAAAGATGGCCACACTCGAGCTTCTCTCGAGCCACAGGGTCGAGCTCTTGAGCCACGTTAGAGCCACGGAATTGGATTCGTTCATCAATAGCTTGTTCTCACTTTGCACAACAAAGAGTACGAGTACGAGTACTTCACACTCTCCTGTAGTGCATTTGAGCGAGTTGATAGAGCAACTGACGTTCAATATGAACTTGAGGCTGATCGCCGGGAAGAGATTTTCCAGTGACCAGTATCACGAGGAGAACAGTACGGCCTGGCGATTCGAAAGAGCAACGAAAGAAGCTTTGTATCTGTTCGGAGTTTTTGTTTGGTCTGATGCGGTGCCATTTCTCGAGTGGCTTGACATAGGTGGGCATGTGAGTGCCATGAAACGATGTTTCAAGGAATTGGACACTGTGCTTGGGGAGTGGCTGGAAGAGCATAGGCAAAGAAAATCATCGGAAGGCAAGAATGGTACGGTTGAAAGTGACTTGATGGATGCGATGATATCCAACTTTGAAGAGGAGGATGAAATAGCTGGCCATAGCCGTGATACTGTCATCAAAGCGACGGCACTGGTTCTAATCCTAACCGGTAGTGAAAGCACAGCTATTACCCTAACATGGGTTGTCTCTTTGCTCCTGAACAACCCAAGAGTCTTAAAAGCAGCTCAAGAAGAGTTGGACCACCATGTAGGAAGAGACAGATGGGTGCAAGAATCAGACATCAAGAACCTCAAATACCTCCAAGCCATCGTGAAAGAAACGTTACGCATAAATCCACCAGGTCCCATAACAGGTCTCCGTGAGGCCACAGAGGACTGCTATGTCGGTGGCTATTACGTCCCCAAGGGCACTCGTTTACTCGTCAACATATGGAAGCTACAGCGGGACCCCCTCATGTGGTCGGACCCCTGCGAGTTCCGACCAGAAAGGTTCATGACGGAAAATGCTGACATGGATTTCAGAGGCCAAAATTTTGAGTATATTCCGTTCAGTGCAGGTAGAAGGTCGTGTCCGGGCATGACGCTTGGTTTGCATGTGGTTCATTTGGTTCTGGCTCGTTTGGTTCAGGGATTTGATATGAAGAGAGAAGGTGATGAGCTAGTGGATATGCGTCCAGGGTTGGGTCTTGCTTTTCCCAAGGCAACTGCACTTGAAGCCGTGCTTGCTCCCCGGCTTCCTGTAGGGCTCTACTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0006629 GO:0006720 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009987 GO:0010035 GO:0010038 GO:0010039 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0042214 GO:0042221 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044550 GO:0046246 GO:0050896 GO:0051716 GO:0055114 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071704 GO:0097007 GO:0097008 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00904 map00904

Pfam Domains

Protein Families

p450

Protein Analysis

532

Amino Acids

59.95

Weight (kDa)

6.64

Isoelectric Point (pI)

35.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	41 - 513	1.1e-86	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006975)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G25180
malus_domestica	MD05G1169600.v1.1 MD05G1189900.v1.1 MD10G1157900.v1.1 MD10G1158100.v1.1 MD10G1176900.v1.1 MD10G1177100.v1.1
prunus_persica	Prupe.8G196800_v2.0.a1 Prupe.8G196900_v2.0.a1 Prupe.8G197000_v2.0.a1
pyrus_communis	pycom05g15710 pycom05g17500 pycom10g13610 pycom10g13620 pycom10g13630 pycom10g13660 pycom10g13670 pycom10g15440
rosa_chinensis	RchiOBHm_Chr6g0283821
rosa_laevigata	RLG00000012794
rosa_multiflora	Rmu_sc0001521.1_g000036
rosa_roxburghii	Rroxscaffold_7G00185160
rosa_rugosa	Rorug06G0158000
rosa_samantha	Rh6CG272900
rosa_wichuraiana	Rw6G023340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1223
AatII	GACGTC	1 cut(s)	414
Acc36I	ACCTGC	1 cut(s)	1388
AccB1I	GGYRCC	1 cut(s)	739
AccBSI	CCGCTC	1 cut(s)	273
AccII	CGCG	1 cut(s)	328
AciI	CCGC	4 cut(s)	273, 345, 737, 1285
AclI	AACGTT	1 cut(s)	1163
AcoI	YGGCCR	3 cut(s)	140, 423, 937
AcsI	RAATTY	2 cut(s)	24, 1372
AcyI	GRCGYC	1 cut(s)	411
AfaI	GTAC	8 cut(s)	353, 392, 401, 535, 541, 547, 667, 874
AfiI	CCNNNNNNNGG	9 cut(s)	138, 149, 265, 421, 1020, 1021, 1193, 1299, 1523
AgeI	ACCGGT	1 cut(s)	989
AgsI	TTSAA	5 cut(s)	601, 799, 881, 917, 1556
AjnI	CCWGG	4 cut(s)	258, 671, 1180, 1516
Alw21I	GWGCWC	2 cut(s)	285, 462
Alw26I	GTCTC	3 cut(s)	1033, 1092, 1202
Ama87I	CYCGRG	5 cut(s)	122, 167, 431, 442, 749
AoxI	GGCC	8 cut(s)	42, 140, 151, 423, 669, 937, 1206, 1366
ApeKI	GCWGC	1 cut(s)	1064
ApoI	RAATTY	2 cut(s)	24, 1372
ArsI	GACNNNNNNTTYG	4 cut(s)	302, 334, 1414, 1446
AsiGI	ACCGGT	1 cut(s)	989
AspLEI	GCGC	1 cut(s)	65
AspS9I	GGNCC	6 cut(s)	174, 224, 1081, 1184, 1288, 1306
AsuC2I	CCSGG	3 cut(s)	625, 1416, 1573
AsuHPI	GGTGA	2 cut(s)	280, 1505
AsuII	TTCGAA	1 cut(s)	681
AvaI	CYCGRG	5 cut(s)	122, 167, 431, 442, 749
AvaII	GGWCC	6 cut(s)	174, 224, 1081, 1184, 1288, 1306
BaeGI	GKGCMC	1 cut(s)	1253
BalI	TGGCCA	3 cut(s)	142, 425, 939
BanI	GGYRCC	1 cut(s)	739
BanII	GRGCYC	5 cut(s)	129, 208, 285, 462, 1590
BarI	GAAGNNNNNNTAC	2 cut(s)	532, 564
BauI	CACGAG	1 cut(s)	653
Bbv12I	GWGCWC	2 cut(s)	285, 462
BbvI	GCAGC	1 cut(s)	1076
BccI	CCATC	5 cut(s)	380, 415, 886, 1098, 1157
BceAI	ACGGC	6 cut(s)	76, 176, 684, 930, 984, 1544
BciT130I	CCWGG	4 cut(s)	260, 673, 1182, 1518
BcnI	CCSGG	3 cut(s)	625, 1416, 1573
BcoDI	GTCTC	3 cut(s)	1033, 1092, 1202
BfaI	CTAG	3 cut(s)	209, 383, 1502
BfmI	CTRYAG	3 cut(s)	561, 1280, 1581
BfoI	RGCGCY	1 cut(s)	66
BfuAI	ACCTGC	1 cut(s)	1388
BisI	GCNGC	2 cut(s)	346, 1065
BlsI	GCNGC	2 cut(s)	347, 1066
BmcAI	AGTACT	3 cut(s)	353, 401, 547
Bme1390I	CCNGG	7 cut(s)	260, 625, 673, 1182, 1416, 1518, 1573
Bme18I	GGWCC	6 cut(s)	174, 224, 1081, 1184, 1288, 1306
BmeT110I	CYCGRG	5 cut(s)	122, 167, 431, 442, 749
BmgT120I	GGNCC	6 cut(s)	174, 224, 1081, 1184, 1288, 1306
BmiI	GGNNCC	7 cut(s)	176, 205, 741, 1186, 1289, 1290, 1308
BmrFI	CCNGG	7 cut(s)	260, 625, 673, 1182, 1416, 1518, 1573
BmsI	GCATC	3 cut(s)	345, 724, 886
BplI	GAGNNNNNCTC	2 cut(s)	425, 457
Bpu14I	TTCGAA	1 cut(s)	681
BpuEI	CTTGAG	4 cut(s)	224, 484, 631, 1053
BpuMI	CCSGG	3 cut(s)	625, 1416, 1573
BsaHI	GRCGYC	1 cut(s)	411
BsaI	GGTCTC	1 cut(s)	1202
BsaJI	CCNNGG	5 cut(s)	480, 1245, 1517, 1539, 1571
BsaWI	WCCGGW	2 cut(s)	131, 989
BsaXI	ACNNNNNCTCC	2 cut(s)	708, 738
Bsc4I	CCNNNNNNNGG	9 cut(s)	138, 149, 265, 421, 1020, 1021, 1193, 1299, 1523
Bse118I	RCCGGY	1 cut(s)	989
Bse1I	ACTGG	4 cut(s)	407, 639, 646, 978
BseBI	CCWGG	4 cut(s)	260, 673, 1182, 1518
BseDI	CCNNGG	5 cut(s)	480, 1245, 1517, 1539, 1571
BseGI	GGATG	3 cut(s)	10, 901, 931
BseLI	CCNNNNNNNGG	9 cut(s)	138, 149, 265, 421, 1020, 1021, 1193, 1299, 1523
BseNI	ACTGG	4 cut(s)	407, 639, 646, 978
BseRI	GAGGAG	2 cut(s)	671, 935
BseSI	GKGCMC	1 cut(s)	1253
BseXI	GCAGC	1 cut(s)	1076
BsgI	GTGCAG	2 cut(s)	1416, 1533
Bsh1236I	CGCG	1 cut(s)	328
Bsh1285I	CGRYCG	1 cut(s)	332
BshFI	GGCC	8 cut(s)	44, 142, 153, 425, 671, 939, 1208, 1368
BshNI	GGYRCC	1 cut(s)	739
BshTI	ACCGGT	1 cut(s)	989
BsiEI	CGRYCG	1 cut(s)	332
BsiHKAI	GWGCWC	2 cut(s)	285, 462
BsiHKCI	CYCGRG	5 cut(s)	122, 167, 431, 442, 749
BsiSI	CCGG	5 cut(s)	132, 624, 990, 1415, 1573
BsiWI	CGTACG	1 cut(s)	390
BslFI	GGGAC	3 cut(s)	1170, 1226, 1301
BslI	CCNNNNNNNGG	9 cut(s)	138, 149, 265, 421, 1020, 1021, 1193, 1299, 1523
BsmAI	GTCTC	3 cut(s)	1033, 1092, 1202
BsmFI	GGGAC	3 cut(s)	1170, 1226, 1301
BsmI	GAATGC	1 cut(s)	299
BsnI	GGCC	8 cut(s)	44, 142, 153, 425, 671, 939, 1208, 1368
Bso31I	GGTCTC	1 cut(s)	1202
BsoBI	CYCGRG	5 cut(s)	122, 167, 431, 442, 749
Bsp119I	TTCGAA	1 cut(s)	681
Bsp1286I	GDGCHC	6 cut(s)	129, 208, 285, 462, 1253, 1590
Bsp143I	GATC	2 cut(s)	108, 618
BspACI	CCGC	4 cut(s)	273, 345, 737, 1285
BspANI	GGCC	8 cut(s)	44, 142, 153, 425, 671, 939, 1208, 1368
BspFNI	CGCG	1 cut(s)	328
BspHI	TCATGA	1 cut(s)	1335
BspLI	GGNNCC	7 cut(s)	176, 205, 741, 1186, 1289, 1290, 1308
BspMI	ACCTGC	1 cut(s)	1388
BspQI	GCTCTTC	1 cut(s)	828
BspT104I	TTCGAA	1 cut(s)	681
BspT107I	GGYRCC	1 cut(s)	739
BspTNI	GGTCTC	1 cut(s)	1202
BsrBI	CCGCTC	1 cut(s)	273
BsrFI	RCCGGY	1 cut(s)	989
BsrI	ACTGG	4 cut(s)	407, 639, 646, 978
BssAI	RCCGGY	1 cut(s)	989
BssECI	CCNNGG	5 cut(s)	480, 1245, 1517, 1539, 1571
BssMI	GATC	2 cut(s)	108, 618
BssNI	GRCGYC	1 cut(s)	411
BssSI	CACGAG	1 cut(s)	653
BssT1I	CCWWGG	2 cut(s)	1245, 1539
Bst2BI	CACGAG	1 cut(s)	653
Bst2UI	CCWGG	4 cut(s)	260, 673, 1182, 1518
Bst4CI	ACNGT	6 cut(s)	368, 399, 665, 814, 877, 955
Bst6I	CTCTTC	6 cut(s)	623, 828, 912, 1068, 1090, 1478
BstACI	GRCGYC	1 cut(s)	411
BstBI	TTCGAA	1 cut(s)	681
BstC8I	GCNNGC	2 cut(s)	937, 1566
BstDSI	CCRYGG	1 cut(s)	480
BstF5I	GGATG	3 cut(s)	10, 901, 931
BstFNI	CGCG	1 cut(s)	328
BstH2I	RGCGCY	1 cut(s)	66
BstHHI	GCGC	1 cut(s)	65
BstKTI	GATC	2 cut(s)	111, 621
BstMAI	GTCTC	3 cut(s)	1033, 1092, 1202
BstMBI	GATC	2 cut(s)	108, 618
BstMCI	CGRYCG	1 cut(s)	332
BstMWI	GCNNNNNNNGC	6 cut(s)	250, 342, 835, 1432, 1556, 1565
BstNI	CCWGG	4 cut(s)	260, 673, 1182, 1518
BstNSI	RCATGY	2 cut(s)	776, 1439
BstSCI	CCNGG	7 cut(s)	258, 623, 671, 1180, 1414, 1516, 1571
BstSFI	CTRYAG	3 cut(s)	561, 1280, 1581
BstSLI	GKGCMC	1 cut(s)	1253
BstUI	CGCG	1 cut(s)	328
BstV1I	GCAGC	1 cut(s)	1076
BstXI	CCANNNNNNTGG	1 cut(s)	487
BsuRI	GGCC	8 cut(s)	44, 142, 153, 425, 671, 939, 1208, 1368
BtgI	CCRYGG	1 cut(s)	480
BtgZI	GCGATG	1 cut(s)	914
BtsCI	GGATG	3 cut(s)	10, 901, 931
BtsIMutI	CAGTG	5 cut(s)	373, 646, 810, 971, 1399
BveI	ACCTGC	1 cut(s)	1388
Cac8I	GCNNGC	2 cut(s)	937, 1566
CciI	TCATGA	1 cut(s)	1335
CfoI	GCGC	1 cut(s)	65
Cfr10I	RCCGGY	1 cut(s)	989
Cfr13I	GGNCC	6 cut(s)	174, 224, 1081, 1184, 1288, 1306
CseI	GACGC	2 cut(s)	1432, 1502
CsiI	ACCWGGT	2 cut(s)	258, 1180
Csp6I	GTAC	8 cut(s)	352, 391, 400, 534, 540, 546, 666, 873
CspAI	ACCGGT	1 cut(s)	989
CviQI	GTAC	8 cut(s)	352, 391, 400, 534, 540, 546, 666, 873
DpnI	GATC	2 cut(s)	110, 620
DpnII	GATC	2 cut(s)	108, 618
DrdI	GACNNNNNNGTC	1 cut(s)	1223
DseDI	GACNNNNNNGTC	1 cut(s)	1223
EaeI	YGGCCR	3 cut(s)	140, 423, 937
Eam1104I	CTCTTC	6 cut(s)	623, 828, 912, 1068, 1090, 1478
EarI	CTCTTC	6 cut(s)	623, 828, 912, 1068, 1090, 1478
Ecl136II	GAGCTC	2 cut(s)	283, 460
Eco130I	CCWWGG	2 cut(s)	1245, 1539
Eco24I	GRGCYC	5 cut(s)	129, 208, 285, 462, 1590
Eco31I	GGTCTC	1 cut(s)	1202
Eco32I	GATATC	1 cut(s)	906
Eco47I	GGWCC	6 cut(s)	174, 224, 1081, 1184, 1288, 1306
Eco53kI	GAGCTC	2 cut(s)	283, 460
Eco88I	CYCGRG	5 cut(s)	122, 167, 431, 442, 749
EcoICRI	GAGCTC	2 cut(s)	283, 460
EcoO109I	RGGNCCY	3 cut(s)	174, 1184, 1288
EcoRII	CCWGG	4 cut(s)	258, 671, 1180, 1516
EcoRV	GATATC	1 cut(s)	906
EcoT14I	CCWWGG	2 cut(s)	1245, 1539
EcoT38I	GRGCYC	5 cut(s)	129, 208, 285, 462, 1590
ErhI	CCWWGG	2 cut(s)	1245, 1539
FalI	AAGNNNNNCTT	2 cut(s)	1548, 1580
FaqI	GGGAC	3 cut(s)	1170, 1226, 1301
FauI	CCCGC	1 cut(s)	1278
FauNDI	CATATG	1 cut(s)	1271
Fnu4HI	GCNGC	2 cut(s)	346, 1065
FokI	GGATG	3 cut(s)	17, 908, 938
FriOI	GRGCYC	5 cut(s)	129, 208, 285, 462, 1590
Fsp4HI	GCNGC	2 cut(s)	346, 1065
FspBI	CTAG	3 cut(s)	209, 383, 1502
GlaI	GCGC	1 cut(s)	64
GluI	GCNGC	2 cut(s)	346, 1065
HaeII	RGCGCY	1 cut(s)	66
HaeIII	GGCC	8 cut(s)	44, 142, 153, 425, 671, 939, 1208, 1368
HapII	CCGG	5 cut(s)	132, 624, 990, 1415, 1573
HgaI	GACGC	2 cut(s)	1432, 1502
HhaI	GCGC	1 cut(s)	65
Hin1I	GRCGYC	1 cut(s)	411
Hin6I	GCGC	1 cut(s)	63
HinP1I	GCGC	1 cut(s)	63
HincII	GTYRAC	1 cut(s)	1267
HindII	GTYRAC	1 cut(s)	1267
HindIII	AAGCTT	2 cut(s)	242, 699
HinfI	GANTC	5 cut(s)	72, 491, 678, 1053, 1115
HpaII	CCGG	5 cut(s)	132, 624, 990, 1415, 1573
HphI	GGTGA	2 cut(s)	280, 1505
Hpy166II	GTNNAC	2 cut(s)	1259, 1267
Hpy188I	TCNGA	8 cut(s)	416, 716, 733, 859, 1120, 1306, 1322, 1364
Hpy8I	GTNNAC	2 cut(s)	1259, 1267
Hpy99I	CGWCG	1 cut(s)	970
HpyAV	CCTTC	4 cut(s)	173, 854, 1398, 1484
HpyCH4III	ACNGT	6 cut(s)	368, 399, 665, 814, 877, 955
HpyCH4IV	ACGT	5 cut(s)	411, 471, 596, 1163, 1239
HpyCH4V	TGCA	8 cut(s)	137, 253, 522, 568, 1111, 1397, 1435, 1550
HpyF10VI	GCNNNNNNNGC	6 cut(s)	250, 342, 835, 1432, 1556, 1565
HpySE526I	ACGT	5 cut(s)	411, 471, 596, 1163, 1239
Hsp92I	GRCGYC	1 cut(s)	411
HspAI	GCGC	1 cut(s)	63
KflI	GGGWCCC	1 cut(s)	1288
Kzo9I	GATC	2 cut(s)	108, 618
LguI	GCTCTTC	1 cut(s)	828
LmnI	GCTCC	4 cut(s)	203, 280, 1041, 1573
Lsp1109I	GCAGC	1 cut(s)	1076
LweI	GCATC	3 cut(s)	345, 724, 886
MabI	ACCWGGT	2 cut(s)	258, 1180
MaeI	CTAG	3 cut(s)	209, 383, 1502
MaeII	ACGT	5 cut(s)	411, 471, 596, 1163, 1239
MaeIII	GTNAC	5 cut(s)	359, 407, 641, 884, 1164
MalI	GATC	2 cut(s)	110, 620
MbiI	CCGCTC	1 cut(s)	273
MboI	GATC	2 cut(s)	108, 618
MboII	GAAGA	8 cut(s)	20, 367, 640, 845, 929, 1085, 1107, 1495
MfeI	CAATTG	1 cut(s)	186
MhlI	GDGCHC	6 cut(s)	129, 208, 285, 462, 1253, 1590
MlsI	TGGCCA	3 cut(s)	142, 425, 939
MluCI	AATT	5 cut(s)	24, 186, 485, 803, 1372
MluNI	TGGCCA	3 cut(s)	142, 425, 939
MlyI	GAGTC	1 cut(s)	1062
MmeI	TCCRAC	4 cut(s)	933, 1059, 1284, 1345
Mox20I	TGGCCA	3 cut(s)	142, 425, 939
MscI	TGGCCA	3 cut(s)	142, 425, 939
MseI	TTAA	1 cut(s)	1058
MslI	CAYNNNNRTG	2 cut(s)	777, 945
Msp20I	TGGCCA	3 cut(s)	142, 425, 939
MspA1I	CMGCKG	1 cut(s)	1285
MspI	CCGG	5 cut(s)	132, 624, 990, 1415, 1573
MspR9I	CCNGG	7 cut(s)	260, 625, 673, 1182, 1416, 1518, 1573
MunI	CAATTG	1 cut(s)	186
Mva1269I	GAATGC	1 cut(s)	299
MvaI	CCWGG	4 cut(s)	260, 673, 1182, 1518
MvnI	CGCG	1 cut(s)	328
MwoI	GCNNNNNNNGC	6 cut(s)	250, 342, 835, 1432, 1556, 1565
NciI	CCSGG	3 cut(s)	625, 1416, 1573
NdeI	CATATG	1 cut(s)	1271
NdeII	GATC	2 cut(s)	108, 618
NlaIV	GGNNCC	7 cut(s)	176, 205, 741, 1186, 1289, 1290, 1308
NmuCI	GTSAC	3 cut(s)	407, 641, 884
NspI	RCATGY	2 cut(s)	776, 1439
NspV	TTCGAA	1 cut(s)	681
PaeR7I	CTCGAG	3 cut(s)	431, 442, 749
PagI	TCATGA	1 cut(s)	1335
PciSI	GCTCTTC	1 cut(s)	828
PcsI	WCGNNNNNNNCGW	1 cut(s)	306
PctI	GAATGC	1 cut(s)	299
PfeI	GAWTC	4 cut(s)	72, 491, 678, 1115
Pfl23II	CGTACG	1 cut(s)	390
PinAI	ACCGGT	1 cut(s)	989
PkrI	GCNGC	2 cut(s)	347, 1066
PleI	GAGTC	1 cut(s)	1061
PpsI	GAGTC	1 cut(s)	1061
PpuMI	RGGWCCY	3 cut(s)	174, 1184, 1288
Psp124BI	GAGCTC	2 cut(s)	285, 462
Psp1406I	AACGTT	1 cut(s)	1163
Psp5II	RGGWCCY	3 cut(s)	174, 1184, 1288
Psp6I	CCWGG	4 cut(s)	258, 671, 1180, 1516
PspGI	CCWGG	4 cut(s)	258, 671, 1180, 1516
PspLI	CGTACG	1 cut(s)	390
PspN4I	GGNNCC	7 cut(s)	176, 205, 741, 1186, 1289, 1290, 1308
PspPI	GGNCC	6 cut(s)	174, 224, 1081, 1184, 1288, 1306
PspPPI	RGGWCCY	3 cut(s)	174, 1184, 1288
PspXI	VCTCGAGB	1 cut(s)	431
PsrI	GAACNNNNNNTAC	4 cut(s)	1121, 1153, 1373, 1405
RsaI	GTAC	8 cut(s)	353, 392, 401, 535, 541, 547, 667, 874
RsaNI	GTAC	8 cut(s)	352, 391, 400, 534, 540, 546, 666, 873
RseI	CAYNNNNRTG	2 cut(s)	777, 945
SacI	GAGCTC	2 cut(s)	285, 462
SapI	GCTCTTC	1 cut(s)	828
SaqAI	TTAA	1 cut(s)	1058
SatI	GCNGC	2 cut(s)	346, 1065
Sau3AI	GATC	2 cut(s)	108, 618
Sau96I	GGNCC	6 cut(s)	174, 224, 1081, 1184, 1288, 1306
ScaI	AGTACT	3 cut(s)	353, 401, 547
SchI	GAGTC	1 cut(s)	1062
ScrFI	CCNGG	7 cut(s)	260, 625, 673, 1182, 1416, 1518, 1573
SduI	GDGCHC	6 cut(s)	129, 208, 285, 462, 1253, 1590
SexAI	ACCWGGT	2 cut(s)	258, 1180
SfaNI	GCATC	3 cut(s)	345, 724, 886
SfcI	CTRYAG	3 cut(s)	561, 1280, 1581
Sfr274I	CTCGAG	3 cut(s)	431, 442, 749
SfuI	TTCGAA	1 cut(s)	681
SinI	GGWCC	6 cut(s)	174, 224, 1081, 1184, 1288, 1306
SlaI	CTCGAG	3 cut(s)	431, 442, 749
SmiMI	CAYNNNNRTG	2 cut(s)	777, 945
SmlI	CTYRAG	7 cut(s)	239, 431, 442, 463, 610, 749, 1068
SmoI	CTYRAG	7 cut(s)	239, 431, 442, 463, 610, 749, 1068
Sse9I	AATT	5 cut(s)	24, 186, 485, 803, 1372
SsiI	CCGC	4 cut(s)	273, 345, 737, 1285
SspMI	CTAG	3 cut(s)	209, 383, 1502
SstI	GAGCTC	2 cut(s)	285, 462
StyD4I	CCNGG	7 cut(s)	258, 623, 671, 1180, 1414, 1516, 1571
StyI	CCWWGG	2 cut(s)	1245, 1539
TaaI	ACNGT	6 cut(s)	368, 399, 665, 814, 877, 955
TaiI	ACGT	5 cut(s)	414, 474, 599, 1166, 1242
TaqI	TCGA	5 cut(s)	432, 443, 456, 681, 750
TaqII	GACCGA	1 cut(s)	346
TasI	AATT	5 cut(s)	24, 186, 485, 803, 1372
TatI	WGTACW	3 cut(s)	351, 399, 545
TauI	GCSGC	1 cut(s)	348
TfiI	GAWTC	4 cut(s)	72, 491, 678, 1115
Tru1I	TTAA	1 cut(s)	1058
Tru9I	TTAA	1 cut(s)	1058
TscAI	CASTG	5 cut(s)	373, 646, 817, 978, 1399
TseFI	GTSAC	3 cut(s)	407, 641, 884
TseI	GCWGC	1 cut(s)	1064
Tsp45I	GTSAC	3 cut(s)	407, 641, 884
TspDTI	ATGAA	8 cut(s)	20, 487, 620, 800, 942, 1324, 1433, 1496
TspGWI	ACGGA	6 cut(s)	237, 408, 497, 1190, 1355, 1377
TspRI	CASTG	5 cut(s)	373, 646, 817, 978, 1399
VpaK11BI	GGWCC	6 cut(s)	174, 224, 1081, 1184, 1288, 1306
XapI	RAATTY	2 cut(s)	24, 1372
XceI	RCATGY	2 cut(s)	776, 1439
XcmI	CCANNNNNNNNNTGG	1 cut(s)	750
XhoI	CTCGAG	3 cut(s)	431, 442, 749
XspI	CTAG	3 cut(s)	209, 383, 1502
ZraI	GACGTC	1 cut(s)	412
ZrmI	AGTACT	3 cut(s)	353, 401, 547

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.