Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0008600

Physical Location & Seq

Genomic Coordinates Forward (+)

1360064 .. 1365069

Gene Structure 5006 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1016800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2190 bp

ATGGAAGAACAACGCTCAGTGAAAACTTCGAAAAGTGGAAAAAACAAGGGTGAAAGCAAAATTGGGAAAAGCTCCAAGACTCCGGGTCAGGCGAAAGAGCATAAGGACCAACTTGAAAGACTTCGCGAAAAGGACCCTGAGTTTTATGGTTTCTTGAAAGAGCATGACCAGGAACTTCTACAATTTGATGATGAGGACATCGAAGAAGATTCAGATGCTGACTTGAAAGAATCTGAGACACAAGATGATGAGATAGAAGCATATGAAGACGATGATGATGTTGCACAAAAGAAAAAGAAACAATCTAAAAAAGTTGTTACTAGTGAAATGGTTGATTCCTGGAGCAACGCTATTAAAGAACATGGGAAGTTGAGTGCTATTCATTCTCTAATGAAAGCTTTCCGCACTGCCTGCCACTATGGTGATGATAAGGAGGATGAGTCTTTGTTAGACTTTAGTGTTATGTCTAGCAGTGTCTTTAACAAAGTGATGATATTTGTACTTAAGGAAATGGATGGAATAATGCGGAACTTGTTGGAGCTCCCTGCTTTTGGTGGGAAGAAAGAGACCATATTAGATCTGATGAACACAAAACGATGGAAGAACTACAACCATTTAGTGAAGTCATATCTTGGAAATGCCTTGCACGTCTTGCGTCAAATGACTGACACTGAAATGATATCGTTTACTTTACGGCGTCTTCAATATTCATCCATATTTTTGGCTGCTTTTCCAGTTCTCTTAAGGAAGTACATTAAGACTGCCTTGGACTTATGGGGTTTAGGGGGAGGTTCCCTCCCTCTTGTCTCCCTTTTATTTCTGAGAGATTTATGCGTTCGGCTTGGATCTGATTGCTTAGATGAATCCTTCAAGGGAATATACAAAGCCTATGTCTTGAACTGCCAGTTTATAACTGCAGCGAAATTACAACATGTTCAATTTCGTGCGAATTGTGTAATTGAACTTTACGGAGTAGACCTTCCCACTGCATATCAACAGGCCTTCGTTTTCATTCGACAGTTAGCAATGATTCTGCGAGAAGCACTTAGTTCAAAAACTAAGGAAGCATTCCGAAAGGTTTATGAGTGGAAGTTCATGAACTGTCTTGAGCTCTGGACTGGAGCCGTCTCTGCCTATGGCTCAGAACCTGAGTTTAGGCCTGTTGCGTATCCCCTGGCGCAAGTAATTTATGGGGTAGCCCGTCTAGTTCCAACTGCTAGATATTTTCCCCTTAGGTTGAGGTGTATTAGAATGCTTAATCGCATTGCTGCTTCAACTGGTACTTTCACTCCCGTTTCTATGCTGCTTTTGGACATGCTTGAGATGAAAGAGTTGAACAGACCCACCACTGGTGGTGTTGGCAAAGCTATTGATTTGCGCACTGTACTGAAGGTTAGCAAGCCAACCCTGAAGACCAGAGCATTTCAGGAGGCGTGTGTGTTATCTGTTGTAGATGAGCTTGCTGAACATTTAGCTCAGTGGAGCTGTTCTGTTGCTTTCCTCGAGTTGTCTTTTATTCCAGCCGTACGATTGCGTACCTTCTGCAAATCCACCAAGGTTGAGAGGTTTCGGAAAGCAATGAGGGAGCTTATTCGTCAGGTCGAGGCTAATTGTCATTTTACAAATGAAAGGCGTATGTCAATTTCTTTTCTGCCAAATGATCCTGCAGCTGCGTCTTTCCTTGAGGAGGAGAAAAAGTCAGGGGCTAGCCCTCTGTCGAAGTATGTTGCAACTCTACGTGAAGTAGCAAAACAAAGAAATGCTTCGTTATCGGAATCCAGTGTTCTTGTGGGCGAGCATTCATCTGTCTTTGGAAGTAAAGGACAAGAAAGCGATGAAGAAGATGACACCAGGGACGAGGAAGGCACTGCTGTCTTTAGTTCATCCTGGTTACCAGGAAAGGATTCCAAAGCTGAGGCACCCCAAGATGTGAAAAAGAAGAAAAGAAAGCGAAGGACTAAGCACCAGGACCAAGTAGCCATGGATGAAGATATTGTTCAGGAGTTGGTACTCAGTTCTGATGAAGAAGATGGATCTTTAAGCGACACCTTTTCTGCTGAAGAAGATGAAGAGGAGAAACAAGCTCCTTCAAAGCTGGAAAGCAAGAAGCCGAAACGCTCAACAAATAAATCAAAGAATTCTTCAAAACCTCAAGCAAAAAGGTCAAGGAAGAGAAAGGCGGCTAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005829 GO:0008150 GO:0022613 GO:0030684 GO:0030686 GO:0030687 GO:0030689 GO:0030690 GO:0030691 GO:0031974 GO:0031981 GO:0032991 GO:0042254 GO:0042273 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0070013 GO:0071840 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Noc2

Protein Analysis

730

Amino Acids

82.7

Weight (kDa)

8.24

Isoelectric Point (pI)

47.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Noc2	PF03715	285 - 578	2.5e-101	Noc2p family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008600)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18220
fragaria_vesca	FvH4_3g44260 FvH4_3g44260 FvH4_3g44260
malus_domestica	MD03G1015600.v1.1 MD11G1016800.v1.1
prunus_persica	Prupe.6G014700_v2.0.a1 Prupe.6G014700_v2.0.a1 Prupe.6G014700_v2.0.a1
pyrus_communis	pycom03g01270 pycom11g01170
rosa_chinensis	RchiOBHm_Chr5g0080571
rosa_laevigata	RLG00000036871
rosa_multiflora	Rmu_co8190986.1_g000001 Rmu_sc0018418.1_g000003 Rmu_ssc0000263.1_g000016
rosa_roxburghii	Rroxscaffold_1G00002790
rosa_rugosa	Rorug05G0470500
rosa_samantha	Rh5AG523800 Rh5BG545900 Rh5CG569100 Rh5DG556200
rosa_wichuraiana	Rw5G048600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	911
Acc16I	TGCGCA	1 cut(s)	1379
AccB1I	GGYRCC	1 cut(s)	1918
AccI	GTMKAC	1 cut(s)	975
AccII	CGCG	1 cut(s)	126
AciI	CCGC	3 cut(s)	403, 526, 2180
AclWI	GGATC	3 cut(s)	853, 1655, 2041
AcsI	RAATTY	1 cut(s)	2137
AcuI	CTGAAG	3 cut(s)	1409, 1430, 2079
AcyI	GRCGYC	1 cut(s)	697
AfaI	GTAC	7 cut(s)	501, 752, 1282, 1386, 1527, 1537, 2010
AfiI	CCNNNNNNNGG	3 cut(s)	551, 1349, 1687
AflII	CTTAAG	2 cut(s)	503, 742
AflIII	ACRYGT	1 cut(s)	931
AhdI	GACNNNNNGTC	1 cut(s)	84
AhlI	ACTAGT	1 cut(s)	320
AjiI	CACGTC	1 cut(s)	649
AjnI	CCWGG	7 cut(s)	168, 338, 1173, 1850, 1886, 1894, 1965
AjuI	GAANNNNNNNTTGG	2 cut(s)	45, 77
AleI	CACNNNNGTG	1 cut(s)	420
Alw21I	GWGCWC	2 cut(s)	543, 1113
Alw26I	GTCTC	4 cut(s)	230, 560, 811, 1132
AlwI	GGATC	3 cut(s)	853, 1655, 2041
AlwNI	CAGNNNCTG	2 cut(s)	218, 1148
Ama87I	CYCGRG	1 cut(s)	1502
AoxI	GGCC	2 cut(s)	999, 1157
ApeKI	GCWGC	6 cut(s)	725, 917, 1268, 1303, 1667, 1670
ApoI	RAATTY	1 cut(s)	2137
ArsI	GACNNNNNNTTYG	2 cut(s)	876, 908
Asp700I	GAANNNNTTC	4 cut(s)	120, 398, 1762, 1903
AspLEI	GCGC	2 cut(s)	1180, 1380
AspS9I	GGNCC	3 cut(s)	106, 133, 1969
AsuC2I	CCSGG	1 cut(s)	84
AsuHPI	GGTGA	2 cut(s)	62, 434
AsuII	TTCGAA	1 cut(s)	29
AsuNHI	GCTAGC	1 cut(s)	1706
AvaI	CYCGRG	1 cut(s)	1502
AvaII	GGWCC	3 cut(s)	106, 133, 1969
AxyI	CCTNAGG	1 cut(s)	1232
BanI	GGYRCC	1 cut(s)	1918
BanII	GRGCYC	2 cut(s)	543, 1113
BbsI	GAAGAC	3 cut(s)	273, 692, 1418
Bbv12I	GWGCWC	2 cut(s)	543, 1113
BbvCI	CCTCAGC	1 cut(s)	1914
BbvI	GCAGC	6 cut(s)	712, 929, 1255, 1290, 1657, 1679
BccI	CCATC	3 cut(s)	509, 591, 2024
BceAI	ACGGC	3 cut(s)	710, 1109, 1508
BciT130I	CCWGG	7 cut(s)	170, 340, 1175, 1852, 1888, 1896, 1967
BciVI	GTATCC	1 cut(s)	1179
BcnI	CCSGG	1 cut(s)	84
BcoDI	GTCTC	4 cut(s)	230, 560, 811, 1132
BcuI	ACTAGT	1 cut(s)	320
BfaI	CTAG	5 cut(s)	321, 468, 1205, 1218, 1707
BfmI	CTRYAG	2 cut(s)	915, 1665
BfrI	CTTAAG	2 cut(s)	503, 742
BfuI	GTATCC	1 cut(s)	1179
BglII	AGATCT	1 cut(s)	577
BisI	GCNGC	7 cut(s)	726, 918, 1269, 1304, 1668, 1671, 2181
BlsI	GCNGC	7 cut(s)	727, 919, 1270, 1305, 1669, 1672, 2182
Bme1390I	CCNGG	8 cut(s)	84, 170, 340, 1175, 1852, 1888, 1896, 1967
Bme18I	GGWCC	3 cut(s)	106, 133, 1969
BmeRI	GACNNNNNGTC	1 cut(s)	84
BmeT110I	CYCGRG	1 cut(s)	1502
BmgBI	CACGTC	1 cut(s)	649
BmgT120I	GGNCC	3 cut(s)	106, 133, 1969
BmiI	GGNNCC	4 cut(s)	135, 793, 1123, 1920
BmrFI	CCNGG	8 cut(s)	84, 170, 340, 1175, 1852, 1888, 1896, 1967
BmsI	GCATC	1 cut(s)	205
BmtI	GCTAGC	1 cut(s)	1710
BpiI	GAAGAC	3 cut(s)	273, 692, 1418
BplI	GAGNNNNNCTC	2 cut(s)	780, 812
BpmI	CTGGAG	2 cut(s)	361, 1140
Bpu10I	CCTNAGC	1 cut(s)	1914
Bpu14I	TTCGAA	1 cut(s)	29
BpuEI	CTTGAG	4 cut(s)	1127, 1340, 1703, 2136
BpuMI	CCSGG	1 cut(s)	84
BsaAI	YACGTR	1 cut(s)	1739
BsaHI	GRCGYC	1 cut(s)	697
BsaI	GGTCTC	1 cut(s)	560
BsaJI	CCNNGG	5 cut(s)	765, 1173, 1554, 1851, 1980
BsaXI	ACNNNNNCTCC	6 cut(s)	425, 455, 1273, 1303, 1682, 1712
Bsc4I	CCNNNNNNNGG	3 cut(s)	551, 1349, 1687
Bse1I	ACTGG	6 cut(s)	734, 904, 1123, 1282, 1354, 1779
Bse21I	CCTNAGG	1 cut(s)	1232
Bse3DI	GCAATG	3 cut(s)	1032, 1263, 1584
BseBI	CCWGG	7 cut(s)	170, 340, 1175, 1852, 1888, 1896, 1967
BseDI	CCNNGG	5 cut(s)	765, 1173, 1554, 1851, 1980
BseGI	GGATG	5 cut(s)	442, 520, 710, 1883, 1990
BseLI	CCNNNNNNNGG	3 cut(s)	551, 1349, 1687
BseMI	GCAATG	3 cut(s)	1032, 1263, 1584
BseMII	CTCAG	9 cut(s)	30, 129, 225, 812, 1140, 1155, 1490, 1905, 2026
BseNI	ACTGG	6 cut(s)	734, 904, 1123, 1282, 1354, 1779
BseRI	GAGGAG	3 cut(s)	1700, 1703, 2087
BseXI	GCAGC	6 cut(s)	712, 929, 1255, 1290, 1657, 1679
Bsh1236I	CGCG	1 cut(s)	126
BshFI	GGCC	2 cut(s)	1001, 1159
BshNI	GGYRCC	1 cut(s)	1918
BsiHKAI	GWGCWC	2 cut(s)	543, 1113
BsiHKCI	CYCGRG	1 cut(s)	1502
BsiSI	CCGG	1 cut(s)	83
BsiWI	CGTACG	1 cut(s)	1525
BslFI	GGGAC	1 cut(s)	1868
BslI	CCNNNNNNNGG	3 cut(s)	551, 1349, 1687
BsmAI	GTCTC	4 cut(s)	230, 560, 811, 1132
BsmBI	CGTCTC	1 cut(s)	1132
BsmFI	GGGAC	1 cut(s)	1868
BsmI	GAATGC	3 cut(s)	1067, 1257, 1798
BsnI	GGCC	2 cut(s)	1001, 1159
Bso31I	GGTCTC	1 cut(s)	560
BsoBI	CYCGRG	1 cut(s)	1502
Bsp119I	TTCGAA	1 cut(s)	29
Bsp1286I	GDGCHC	2 cut(s)	543, 1113
Bsp143I	GATC	4 cut(s)	577, 845, 1660, 2033
Bsp19I	CCATGG	1 cut(s)	1980
Bsp68I	TCGCGA	1 cut(s)	126
BspACI	CCGC	3 cut(s)	403, 526, 2180
BspANI	GGCC	2 cut(s)	1001, 1159
BspCNI	CTCAG	9 cut(s)	29, 130, 226, 813, 1141, 1154, 1489, 1906, 2025
BspFNI	CGCG	1 cut(s)	126
BspHI	TCATGA	1 cut(s)	1095
BspLI	GGNNCC	4 cut(s)	135, 793, 1123, 1920
BspMAI	CTGCAG	2 cut(s)	919, 1669
BspOI	GCTAGC	1 cut(s)	1710
BspPI	GGATC	3 cut(s)	853, 1655, 2041
BspT104I	TTCGAA	1 cut(s)	29
BspT107I	GGYRCC	1 cut(s)	1918
BspTI	CTTAAG	2 cut(s)	503, 742
BspTNI	GGTCTC	1 cut(s)	560
BsrDI	GCAATG	3 cut(s)	1032, 1263, 1584
BsrI	ACTGG	6 cut(s)	734, 904, 1123, 1282, 1354, 1779
BssECI	CCNNGG	5 cut(s)	765, 1173, 1554, 1851, 1980
BssMI	GATC	4 cut(s)	577, 845, 1660, 2033
BssNI	GRCGYC	1 cut(s)	697
BssT1I	CCWWGG	3 cut(s)	765, 1554, 1980
Bst2UI	CCWGG	7 cut(s)	170, 340, 1175, 1852, 1888, 1896, 1967
Bst4CI	ACNGT	3 cut(s)	1020, 1103, 1384
Bst6I	CTCTTC	2 cut(s)	2064, 2165
BstACI	GRCGYC	1 cut(s)	697
BstAFI	CTTAAG	2 cut(s)	503, 742
BstAPI	GCANNNNNTGC	2 cut(s)	411, 652
BstBAI	YACGTR	1 cut(s)	1739
BstBI	TTCGAA	1 cut(s)	29
BstC8I	GCNNGC	5 cut(s)	412, 1400, 1461, 1708, 1796
BstDSI	CCRYGG	1 cut(s)	1980
BstEII	GGTNACC	1 cut(s)	1890
BstENI	CCTNNNNNAGG	1 cut(s)	1685
BstF5I	GGATG	5 cut(s)	442, 520, 710, 1883, 1990
BstFNI	CGCG	1 cut(s)	126
BstHHI	GCGC	2 cut(s)	1180, 1380
BstKTI	GATC	4 cut(s)	580, 848, 1663, 2036
BstMAI	GTCTC	4 cut(s)	230, 560, 811, 1132
BstMBI	GATC	4 cut(s)	577, 845, 1660, 2033
BstMWI	GCNNNNNNNGC	3 cut(s)	411, 652, 1130
BstNI	CCWGG	7 cut(s)	170, 340, 1175, 1852, 1888, 1896, 1967
BstNSI	RCATGY	2 cut(s)	935, 1318
BstPI	GGTNACC	1 cut(s)	1890
BstSCI	CCNGG	8 cut(s)	82, 168, 338, 1173, 1850, 1886, 1894, 1965
BstSFI	CTRYAG	2 cut(s)	915, 1665
BstUI	CGCG	1 cut(s)	126
BstV1I	GCAGC	6 cut(s)	712, 929, 1255, 1290, 1657, 1679
BstV2I	GAAGAC	3 cut(s)	273, 692, 1418
BstX2I	RGATCY	3 cut(s)	577, 845, 2033
BstXI	CCANNNNNNTGG	1 cut(s)	721
BstYI	RGATCY	3 cut(s)	577, 845, 2033
Bsu36I	CCTNAGG	1 cut(s)	1232
BsuI	GTATCC	1 cut(s)	1179
BsuRI	GGCC	2 cut(s)	1001, 1159
BtgI	CCRYGG	1 cut(s)	1980
BtgZI	GCGATG	1 cut(s)	1848
BtrI	CACGTC	1 cut(s)	649
BtsCI	GGATG	5 cut(s)	442, 520, 710, 1883, 1990
BtsI	GCAGTG	4 cut(s)	405, 478, 984, 1866
BtuMI	TCGCGA	1 cut(s)	126
Cac8I	GCNNGC	5 cut(s)	412, 1400, 1461, 1708, 1796
CaiI	CAGNNNCTG	2 cut(s)	218, 1148
CciI	TCATGA	1 cut(s)	1095
CfoI	GCGC	2 cut(s)	1180, 1380
Cfr13I	GGNCC	3 cut(s)	106, 133, 1969
CseI	GACGC	3 cut(s)	644, 686, 1662
Csp6I	GTAC	7 cut(s)	500, 751, 1281, 1385, 1526, 1536, 2009
CspCI	CAANNNNNGTGG	2 cut(s)	1540, 1575
CviAII	CATG	6 cut(s)	164, 362, 932, 1096, 1315, 1981
CviQI	GTAC	7 cut(s)	500, 751, 1281, 1385, 1526, 1536, 2009
DpnI	GATC	4 cut(s)	579, 847, 1662, 2035
DpnII	GATC	4 cut(s)	577, 845, 1660, 2033
DriI	GACNNNNNGTC	1 cut(s)	84
Eam1104I	CTCTTC	2 cut(s)	2064, 2165
Eam1105I	GACNNNNNGTC	1 cut(s)	84
EarI	CTCTTC	2 cut(s)	2064, 2165
Ecl136II	GAGCTC	2 cut(s)	541, 1111
Eco130I	CCWWGG	3 cut(s)	765, 1554, 1980
Eco147I	AGGCCT	2 cut(s)	1001, 1159
Eco24I	GRGCYC	2 cut(s)	543, 1113
Eco31I	GGTCTC	1 cut(s)	560
Eco32I	GATATC	1 cut(s)	681
Eco47I	GGWCC	3 cut(s)	106, 133, 1969
Eco53kI	GAGCTC	2 cut(s)	541, 1111
Eco57I	CTGAAG	3 cut(s)	1409, 1430, 2079
Eco81I	CCTNAGG	1 cut(s)	1232
Eco88I	CYCGRG	1 cut(s)	1502
Eco91I	GGTNACC	1 cut(s)	1890
EcoICRI	GAGCTC	2 cut(s)	541, 1111
EcoNI	CCTNNNNNAGG	1 cut(s)	1685
EcoO109I	RGGNCCY	1 cut(s)	133
EcoO65I	GGTNACC	1 cut(s)	1890
EcoRI	GAATTC	1 cut(s)	2137
EcoRII	CCWGG	7 cut(s)	168, 338, 1173, 1850, 1886, 1894, 1965
EcoRV	GATATC	1 cut(s)	681
EcoT14I	CCWWGG	3 cut(s)	765, 1554, 1980
EcoT38I	GRGCYC	2 cut(s)	543, 1113
ErhI	CCWWGG	3 cut(s)	765, 1554, 1980
Esp3I	CGTCTC	1 cut(s)	1132
FaeI	CATG	6 cut(s)	167, 365, 935, 1099, 1318, 1984
FalI	AAGNNNNNCTT	4 cut(s)	749, 781, 1747, 1779
FaqI	GGGAC	1 cut(s)	1868
FatI	CATG	6 cut(s)	163, 361, 931, 1095, 1314, 1980
FauNDI	CATATG	1 cut(s)	262
FblI	GTMKAC	1 cut(s)	975
Fnu4HI	GCNGC	7 cut(s)	726, 918, 1269, 1304, 1668, 1671, 2181
FokI	GGATG	5 cut(s)	449, 527, 697, 1870, 1997
FriOI	GRGCYC	2 cut(s)	543, 1113
Fsp4HI	GCNGC	7 cut(s)	726, 918, 1269, 1304, 1668, 1671, 2181
FspBI	CTAG	5 cut(s)	321, 468, 1205, 1218, 1707
FspI	TGCGCA	1 cut(s)	1379
GlaI	GCGC	2 cut(s)	1179, 1379
GluI	GCNGC	7 cut(s)	726, 918, 1269, 1304, 1668, 1671, 2181
GsuI	CTGGAG	2 cut(s)	361, 1140
HaeIII	GGCC	2 cut(s)	1001, 1159
HapII	CCGG	1 cut(s)	83
HgaI	GACGC	3 cut(s)	644, 686, 1662
HhaI	GCGC	2 cut(s)	1180, 1380
Hin1I	GRCGYC	1 cut(s)	697
Hin1II	CATG	6 cut(s)	167, 365, 935, 1099, 1318, 1984
Hin6I	GCGC	2 cut(s)	1178, 1378
HinP1I	GCGC	2 cut(s)	1178, 1378
HindIII	AAGCTT	1 cut(s)	396
HinfI	GANTC	9 cut(s)	79, 209, 230, 335, 440, 863, 1030, 1775, 1904
HpaII	CCGG	1 cut(s)	83
HphI	GGTGA	2 cut(s)	62, 434
Hpy166II	GTNNAC	2 cut(s)	687, 976
Hpy188III	TCNNGA	8 cut(s)	125, 154, 895, 1096, 1106, 1114, 1427, 2000
Hpy8I	GTNNAC	2 cut(s)	687, 976
HpyAV	CCTTC	8 cut(s)	877, 989, 1012, 1384, 1549, 1856, 1947, 2097
HpyCH4III	ACNGT	3 cut(s)	1020, 1103, 1384
HpyCH4IV	ACGT	2 cut(s)	648, 1738
HpyCH4V	TGCA	7 cut(s)	284, 646, 917, 989, 1545, 1667, 1730
HpyF10VI	GCNNNNNNNGC	3 cut(s)	411, 652, 1130
HpySE526I	ACGT	2 cut(s)	648, 1738
Hsp92I	GRCGYC	1 cut(s)	697
Hsp92II	CATG	6 cut(s)	167, 365, 935, 1099, 1318, 1984
HspAI	GCGC	2 cut(s)	1178, 1378
Kzo9I	GATC	4 cut(s)	577, 845, 1660, 2033
LmnI	GCTCC	8 cut(s)	77, 342, 538, 546, 1121, 1482, 1585, 2089
Lsp1109I	GCAGC	6 cut(s)	712, 929, 1255, 1290, 1657, 1679
LweI	GCATC	1 cut(s)	205
MaeI	CTAG	5 cut(s)	321, 468, 1205, 1218, 1707
MaeII	ACGT	2 cut(s)	648, 1738
MaeIII	GTNAC	2 cut(s)	316, 1890
MalI	GATC	4 cut(s)	579, 847, 1662, 2035
MboI	GATC	4 cut(s)	577, 845, 1660, 2033
MflI	RGATCY	3 cut(s)	577, 845, 2033
MhlI	GDGCHC	2 cut(s)	543, 1113
MlyI	GAGTC	2 cut(s)	73, 449
MmeI	TCCRAC	2 cut(s)	516, 1235
MroXI	GAANNNNTTC	4 cut(s)	120, 398, 1762, 1903
MseI	TTAA	7 cut(s)	354, 480, 504, 743, 756, 1257, 2039
MslI	CAYNNNNRTG	2 cut(s)	420, 674
MspA1I	CMGCKG	1 cut(s)	1670
MspCI	CTTAAG	2 cut(s)	503, 742
MspI	CCGG	1 cut(s)	83
MspR9I	CCNGG	8 cut(s)	84, 170, 340, 1175, 1852, 1888, 1896, 1967
Mva1269I	GAATGC	3 cut(s)	1067, 1257, 1798
MvaI	CCWGG	7 cut(s)	170, 340, 1175, 1852, 1888, 1896, 1967
MvnI	CGCG	1 cut(s)	126
MwoI	GCNNNNNNNGC	3 cut(s)	411, 652, 1130
NciI	CCSGG	1 cut(s)	84
NcoI	CCATGG	1 cut(s)	1980
NdeI	CATATG	1 cut(s)	262
NdeII	GATC	4 cut(s)	577, 845, 1660, 2033
NheI	GCTAGC	1 cut(s)	1706
NlaIII	CATG	6 cut(s)	167, 365, 935, 1099, 1318, 1984
NlaIV	GGNNCC	4 cut(s)	135, 793, 1123, 1920
NruI	TCGCGA	1 cut(s)	126
NsbI	TGCGCA	1 cut(s)	1379
NspI	RCATGY	2 cut(s)	935, 1318
NspV	TTCGAA	1 cut(s)	29
OliI	CACNNNNGTG	1 cut(s)	420
PaeR7I	CTCGAG	1 cut(s)	1502
PagI	TCATGA	1 cut(s)	1095
PceI	AGGCCT	2 cut(s)	1001, 1159
PciI	ACATGT	1 cut(s)	931
PctI	GAATGC	3 cut(s)	1067, 1257, 1798
PdmI	GAANNNNTTC	4 cut(s)	120, 398, 1762, 1903
PfeI	GAWTC	7 cut(s)	209, 230, 335, 863, 1030, 1775, 1904
Pfl23II	CGTACG	1 cut(s)	1525
PfoI	TCCNGGA	1 cut(s)	338
PkrI	GCNGC	7 cut(s)	727, 919, 1270, 1305, 1669, 1672, 2182
PleI	GAGTC	2 cut(s)	73, 448
PpsI	GAGTC	2 cut(s)	73, 448
Ppu21I	YACGTR	1 cut(s)	1739
PpuMI	RGGWCCY	1 cut(s)	133
PscI	ACATGT	1 cut(s)	931
PsiI	TTATAA	1 cut(s)	911
Psp124BI	GAGCTC	2 cut(s)	543, 1113
Psp5II	RGGWCCY	1 cut(s)	133
Psp6I	CCWGG	7 cut(s)	168, 338, 1173, 1850, 1886, 1894, 1965
PspEI	GGTNACC	1 cut(s)	1890
PspGI	CCWGG	7 cut(s)	168, 338, 1173, 1850, 1886, 1894, 1965
PspLI	CGTACG	1 cut(s)	1525
PspN4I	GGNNCC	4 cut(s)	135, 793, 1123, 1920
PspPI	GGNCC	3 cut(s)	106, 133, 1969
PspPPI	RGGWCCY	1 cut(s)	133
PspXI	VCTCGAGB	1 cut(s)	1502
PstI	CTGCAG	2 cut(s)	919, 1669
PstNI	CAGNNNCTG	2 cut(s)	218, 1148
PsuI	RGATCY	3 cut(s)	577, 845, 2033
PvuII	CAGCTG	1 cut(s)	1670
RruI	TCGCGA	1 cut(s)	126
RsaI	GTAC	7 cut(s)	501, 752, 1282, 1386, 1527, 1537, 2010
RsaNI	GTAC	7 cut(s)	500, 751, 1281, 1385, 1526, 1536, 2009
RseI	CAYNNNNRTG	2 cut(s)	420, 674
SacI	GAGCTC	2 cut(s)	543, 1113
SaqAI	TTAA	7 cut(s)	354, 480, 504, 743, 756, 1257, 2039
SatI	GCNGC	7 cut(s)	726, 918, 1269, 1304, 1668, 1671, 2181
Sau3AI	GATC	4 cut(s)	577, 845, 1660, 2033
Sau96I	GGNCC	3 cut(s)	106, 133, 1969
SchI	GAGTC	2 cut(s)	73, 449
ScrFI	CCNGG	8 cut(s)	84, 170, 340, 1175, 1852, 1888, 1896, 1967
SduI	GDGCHC	2 cut(s)	543, 1113
SfaNI	GCATC	1 cut(s)	205
SfcI	CTRYAG	2 cut(s)	915, 1665
Sfr274I	CTCGAG	1 cut(s)	1502
SfuI	TTCGAA	1 cut(s)	29
SinI	GGWCC	3 cut(s)	106, 133, 1969
SlaI	CTCGAG	1 cut(s)	1502
SmiMI	CAYNNNNRTG	2 cut(s)	420, 674
SmlI	CTYRAG	7 cut(s)	503, 742, 1106, 1319, 1502, 1682, 2151
SmoI	CTYRAG	7 cut(s)	503, 742, 1106, 1319, 1502, 1682, 2151
SpeI	ACTAGT	1 cut(s)	320
SseBI	AGGCCT	2 cut(s)	1001, 1159
SsiI	CCGC	3 cut(s)	403, 526, 2180
SspI	AATATT	1 cut(s)	707
SspMI	CTAG	5 cut(s)	321, 468, 1205, 1218, 1707
SstI	GAGCTC	2 cut(s)	543, 1113
StuI	AGGCCT	2 cut(s)	1001, 1159
StyD4I	CCNGG	8 cut(s)	82, 168, 338, 1173, 1850, 1886, 1894, 1965
StyI	CCWWGG	3 cut(s)	765, 1554, 1980
TaaI	ACNGT	3 cut(s)	1020, 1103, 1384
TaiI	ACGT	2 cut(s)	651, 1741
TaqI	TCGA	6 cut(s)	29, 201, 1015, 1503, 1602, 1718
TatI	WGTACW	3 cut(s)	499, 750, 1384
TauI	GCSGC	1 cut(s)	2183
TfiI	GAWTC	7 cut(s)	209, 230, 335, 863, 1030, 1775, 1904
Tru1I	TTAA	7 cut(s)	354, 480, 504, 743, 756, 1257, 2039
Tru9I	TTAA	7 cut(s)	354, 480, 504, 743, 756, 1257, 2039
TseI	GCWGC	6 cut(s)	725, 917, 1268, 1303, 1667, 1670
TspGWI	ACGGA	1 cut(s)	984
Vha464I	CTTAAG	2 cut(s)	503, 742
VpaK11BI	GGWCC	3 cut(s)	106, 133, 1969
XagI	CCTNNNNNAGG	1 cut(s)	1685
XapI	RAATTY	1 cut(s)	2137
XceI	RCATGY	2 cut(s)	935, 1318
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1786
XhoI	CTCGAG	1 cut(s)	1502
XmiI	GTMKAC	1 cut(s)	975
XmnI	GAANNNNTTC	4 cut(s)	120, 398, 1762, 1903
XspI	CTAG	5 cut(s)	321, 468, 1205, 1218, 1707

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.