Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0008600

Physical Location & Seq

Genomic Coordinates Forward (+)

3331512 .. 3338922

Gene Structure 7411 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00002790.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2400 bp

ATGGTGGCCATGGTGGCCTCCAGCCTGCTTATTCTCCTTCTAGTTGTGTTGGGTAACGATGGTTTTGTGAGGGTGTCGGGTTTTGGTGACACTATTGCTAGGGATGCGGGTATTGCAACCGAGTTGGTGGCGTTGATCGGGTGCTTGTGCTCGGTGATAAACCAAGATGTCTTTGTTCGAAATGGGATCTCGGTTGCTCGGATTTGCGAGTGGACGAAGGAACCCGGAGATCCGAATGCTCCGTGTGTATGGTTCTTGAACGTGGTCATGGGCAATGAGACTAGATTGGGTGTGCTCGACTCTTGGGTGGATTTGATGACGGACCCGGAGTTCTATGACTTCTTAAAAGAGCATGACCAGGAACTTCTGCAGTTTGACGATGAGGACATTGAAGAAGATTCGGATACTAACTTGGAGGATGAAGAGACGCAAGAAGGTGATGAGATAGAAGAGGATGAAGACGCTAGCAATCATGATGTCAAAAAGAAGGAAAAGGAGACGCTGAAAAAAGTTATAACTAGTGAAATGGTTGATTCTTGGTGCAACATGATTCGAGAAACTGGGAAATTGAGTGCTATTCATTCTCTTATGAAAGCTTTCCGCACTGCCTGCCACTATGGTGATGATAAAGAGGATGAGTCTACGCTAGATTTTAGTATTATGTCTAGCAGTGTCTTTAATAAAGTGATGGTATTTGTACTTAATGAAATGGATGGAATAATTCGGAACTTGTTGGAGCTCCCTGCCTTTGGTGGGAAAAAAGAGACCATAATAGATCTTATGAGCACAAAACGATGGAAGAACTACAACCATTTAGTGAAGTCATATCTTGGAAATGCTTTACATGTCTTGCGTCAAATGACTGACACAGACATGATATCATTTACTTTACGGCGTCTTAAACATTCCTCCATATTTTTGGCTGCTTTTCCGATTCTCCTGAGGAAGTACGTTAAGACTGCCCTTGATTTGTGGGGTTTAGGTGGAGGTGCCCTCCCAATTGCCTCCCTTCTATTTTTAAGAGATCTGTGCATTCGGCTGGGATCTGATTGCTTAGATGAATGTTTCAAGGGGATCTACAAAGCCTATGTCTTGAACTGCCAGTTTATGAATGCAGCAAAATTACAACACGTCCAGTTTCTTGGAAATTGTGTAATTGAACTTTACGGTGTAGACCTTCCGACTGCATATCAACATGCCTTCATTTTCATTCGGCAATTAGCAATGATCTTGCGAGAGGCACTTAGTTCAAAAACTAAGGAAGCATTTAGAAAGGTTTATGAGTGGAAGTTCATGAACTGCCTTGAGCTCTGGACTGGAGCTGTCTGTGCCTACGGCTCAGAAGCTGACTTTAGACCAGTTGTATATCCTCTGACCCAAATAATTTACGGGGCTGCCCGTCTAGTTCCAACAGCTAGGTATTTACCTCTCAGATTGCGTTGTATTAGAATGCTTAATCGAATTGCTGCTTCGACGGGTACTTTCACACCAGTTTCTATGTTGCTTTTGGACATGCTTGAAATGAAAGAATTGAATAGGCCCACCACAGGTGGTGTTGGCAAAGCTGTTGATTTGCGTACTATACTTAAGGTTAGCAAGCCAACCCTGAAGACCCGAGCATTTCAGGAGGCTTGTGTGTTATCCGTTGTTGATGAGCTTGCTGAGCATTTAGCACAGTGGAGCTATTCCATTGCTTTCCCTGAGTTGTCCTTTATACCAGGAGTGCGATTGCGTGGCTTTTGCAAATCCACCAAGGTTGAGAGGTTTCGGAGAGCAACAAGGGAGCTTATCCGTCAGATTGAGGCCAATTCGCAGTTTATAACTGAAAGGCGCAAGGCAATCTCATTTCTGCCAAATGATCCTGCAGTTGCATCTTTTCTTGAGGTCATTAATGAGTTGCTACTTAGTCCTGCTTTTGTTGCCTTGGGGTTGGATGAAAAAAGATCAGAGGCTAGCCCTCTGTCACAATATGTTTTAAGTCTACGCCAAATAGCGCAACAAAGAAATGATTCACTGGTGGAATCCAGTGTTCTTGTGGGAGAGAATTCGGCTGTGTTTGGAAAGAGGAAAATACATGAGAGTGATGAAGAAGATGACACTAGGGACGAGGAAGGCACTACTGTGGATAAAAAACCTAAAGATGTAAAAAAGAAGAAAAAGAGAAAGACTGAGCAGGAGGAACGAGTAGCCATCGACGAAGATATTGTTGAAGATTTGGTACTCAGCTCTGATGAAGAAGAAGGGCCTTCAAGTGATGCTCTTTCAGATGCGGATGAAGAAGAGGGAAAGCCAGAACCATCGAAACCGGGAAGTAAGAAGCAGAAACGATTTACAAATCCATCAAAGAAGAATGTAAAATCTCAAGCAAAGAAATCAAGAAAGAGAAAGGGCGTTAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005829 GO:0008150 GO:0022613 GO:0030684 GO:0030686 GO:0030687 GO:0030689 GO:0030690 GO:0030691 GO:0031974 GO:0031981 GO:0032991 GO:0042254 GO:0042273 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0070013 GO:0071840 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Noc2

Protein Analysis

799

Amino Acids

90.12

Weight (kDa)

5.58

Isoelectric Point (pI)

40.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Noc2	PF03715	351 - 628	3.3e-102	Noc2p family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008600)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18220
fragaria_vesca	FvH4_3g44260 FvH4_3g44260 FvH4_3g44260
malus_domestica	MD03G1015600.v1.1 MD11G1016800.v1.1
prunus_persica	Prupe.6G014700_v2.0.a1 Prupe.6G014700_v2.0.a1 Prupe.6G014700_v2.0.a1
pyrus_communis	pycom03g01270 pycom11g01170
rosa_chinensis	RchiOBHm_Chr5g0080571
rosa_laevigata	RLG00000036871
rosa_multiflora	Rmu_co8190986.1_g000001 Rmu_sc0018418.1_g000003 Rmu_ssc0000263.1_g000016
rosa_roxburghii	Rroxscaffold_1G00002790
rosa_rugosa	Rorug05G0470500
rosa_samantha	Rh5AG523800 Rh5BG545900 Rh5CG569100 Rh5DG556200
rosa_wichuraiana	Rw5G048600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	515, 1820
AccB1I	GGYRCC	1 cut(s)	989
AccI	GTMKAC	3 cut(s)	641, 1173, 1981
AciI	CCGC	3 cut(s)	107, 601, 2270
AclWI	GGATC	5 cut(s)	194, 224, 1051, 1082, 1853
AcoI	YGGCCR	1 cut(s)	6
AcsI	RAATTY	1 cut(s)	2044
AcuI	CTGAAG	1 cut(s)	1628
AcyI	GRCGYC	1 cut(s)	895
AfaI	GTAC	5 cut(s)	699, 950, 1480, 1579, 2220
AfiI	CCNNNNNNNGG	3 cut(s)	749, 753, 1547
AflII	CTTAAG	1 cut(s)	1586
AflIII	ACRYGT	2 cut(s)	844, 1129
AhlI	ACTAGT	1 cut(s)	518
AjiI	CACGTC	1 cut(s)	1132
AjnI	CCWGG	2 cut(s)	357, 1717
AleI	CACNNNNGTG	2 cut(s)	618, 2120
AloI	GAACNNNNNNTCC	2 cut(s)	314, 346
Alw21I	GWGCWC	5 cut(s)	152, 297, 741, 788, 1311
Alw26I	GTCTC	4 cut(s)	272, 419, 491, 758
AlwI	GGATC	5 cut(s)	194, 224, 1051, 1082, 1853
AlwNI	CAGNNNCTG	1 cut(s)	1346
Ama87I	CYCGRG	1 cut(s)	1614
AoxI	GGCC	5 cut(s)	6, 15, 1538, 1803, 2243
ApeKI	GCWGC	4 cut(s)	923, 1115, 1394, 1466
ApoI	RAATTY	1 cut(s)	2044
ArsI	GACNNNNNNTTYG	2 cut(s)	1074, 1106
AseI	ATTAAT	1 cut(s)	1890
Asp700I	GAANNNNTTC	2 cut(s)	596, 2008
AspLEI	GCGC	2 cut(s)	1833, 1996
AspS9I	GGNCC	3 cut(s)	322, 1539, 2243
AsuC2I	CCSGG	3 cut(s)	225, 326, 2307
AsuHPI	GGTGA	4 cut(s)	98, 166, 449, 632
AsuII	TTCGAA	1 cut(s)	178
AsuNHI	GCTAGC	2 cut(s)	464, 1952
AvaI	CYCGRG	1 cut(s)	1614
AvaII	GGWCC	1 cut(s)	322
AxyI	CCTNAGG	1 cut(s)	941
BaeGI	GKGCMC	1 cut(s)	994
BalI	TGGCCA	1 cut(s)	8
BanI	GGYRCC	1 cut(s)	989
BanII	GRGCYC	2 cut(s)	741, 1311
BarI	GAAGNNNNNNTAC	2 cut(s)	2202, 2234
BbsI	GAAGAC	2 cut(s)	465, 1616
Bbv12I	GWGCWC	5 cut(s)	152, 297, 741, 788, 1311
BbvI	GCAGC	4 cut(s)	910, 1127, 1381, 1453
BccI	CCATC	7 cut(s)	53, 682, 707, 789, 2198, 2305, 2347
BceAI	ACGGC	2 cut(s)	908, 1351
BciT130I	CCWGG	2 cut(s)	359, 1719
BciVI	GTATCC	1 cut(s)	397
BcnI	CCSGG	3 cut(s)	225, 326, 2307
BcoDI	GTCTC	4 cut(s)	272, 419, 491, 758
BcuI	ACTAGT	1 cut(s)	518
BfmI	CTRYAG	2 cut(s)	368, 1863
BfrI	CTTAAG	1 cut(s)	1586
BfuI	GTATCC	1 cut(s)	397
BglI	GCCNNNNNGGC	1 cut(s)	14
BglII	AGATCT	2 cut(s)	775, 1024
BisI	GCNGC	4 cut(s)	924, 1116, 1395, 1467
BlpI	GCTNAGC	1 cut(s)	1662
BlsI	GCNGC	4 cut(s)	925, 1117, 1396, 1468
Bme1390I	CCNGG	5 cut(s)	225, 326, 359, 1719, 2307
Bme18I	GGWCC	1 cut(s)	322
BmeT110I	CYCGRG	1 cut(s)	1614
BmgBI	CACGTC	1 cut(s)	1132
BmgT120I	GGNCC	3 cut(s)	322, 1539, 2243
BmiI	GGNNCC	3 cut(s)	222, 324, 991
BmrFI	CCNGG	5 cut(s)	225, 326, 359, 1719, 2307
BmrI	ACTGGG	1 cut(s)	570
BmsI	GCATC	4 cut(s)	94, 1880, 2245, 2257
BmtI	GCTAGC	2 cut(s)	468, 1956
BmuI	ACTGGG	1 cut(s)	570
BpiI	GAAGAC	2 cut(s)	465, 1616
BplI	GAGNNNNNCTC	2 cut(s)	978, 1010
BpmI	CTGGAG	2 cut(s)	4, 1338
Bpu1102I	GCTNAGC	1 cut(s)	1662
Bpu14I	TTCGAA	1 cut(s)	178
BpuEI	CTTGAG	3 cut(s)	1325, 1901, 2346
BpuMI	CCSGG	3 cut(s)	225, 326, 2307
BsaHI	GRCGYC	1 cut(s)	895
BsaI	GGTCTC	1 cut(s)	758
BsaJI	CCNNGG	3 cut(s)	9, 1752, 1923
Bsc4I	CCNNNNNNNGG	3 cut(s)	749, 753, 1547
Bse1I	ACTGG	8 cut(s)	565, 1102, 1135, 1321, 1358, 1490, 2019, 2025
Bse21I	CCTNAGG	1 cut(s)	941
Bse3DI	GCAATG	3 cut(s)	280, 1230, 1689
BseBI	CCWGG	2 cut(s)	359, 1719
BseDI	CCNNGG	3 cut(s)	9, 1752, 1923
BseGI	GGATG	7 cut(s)	109, 424, 460, 640, 718, 1939, 2278
BseLI	CCNNNNNNNGG	3 cut(s)	749, 753, 1547
BseMI	GCAATG	3 cut(s)	280, 1230, 1689
BseMII	CTCAG	7 cut(s)	932, 1353, 1444, 1653, 1692, 2160, 2236
BseNI	ACTGG	8 cut(s)	565, 1102, 1135, 1321, 1358, 1490, 2019, 2025
BseSI	GKGCMC	1 cut(s)	994
BseXI	GCAGC	4 cut(s)	910, 1127, 1381, 1453
BseYI	CCCAGC	1 cut(s)	1039
BshFI	GGCC	5 cut(s)	8, 17, 1540, 1805, 2245
BshNI	GGYRCC	1 cut(s)	989
BsiHKAI	GWGCWC	5 cut(s)	152, 297, 741, 788, 1311
BsiHKCI	CYCGRG	1 cut(s)	1614
BsiSI	CCGG	3 cut(s)	225, 326, 2306
BslFI	GGGAC	1 cut(s)	2117
BslI	CCNNNNNNNGG	3 cut(s)	749, 753, 1547
BsmAI	GTCTC	4 cut(s)	272, 419, 491, 758
BsmBI	CGTCTC	2 cut(s)	419, 491
BsmFI	GGGAC	1 cut(s)	2117
BsmI	GAATGC	4 cut(s)	241, 1032, 1117, 1455
BsnI	GGCC	5 cut(s)	8, 17, 1540, 1805, 2245
Bso31I	GGTCTC	1 cut(s)	758
BsoBI	CYCGRG	1 cut(s)	1614
Bsp119I	TTCGAA	1 cut(s)	178
Bsp1286I	GDGCHC	6 cut(s)	152, 297, 741, 788, 994, 1311
Bsp1720I	GCTNAGC	1 cut(s)	1662
Bsp19I	CCATGG	1 cut(s)	9
BspACI	CCGC	3 cut(s)	107, 601, 2270
BspANI	GGCC	5 cut(s)	8, 17, 1540, 1805, 2245
BspCNI	CTCAG	7 cut(s)	933, 1352, 1443, 1654, 1693, 2161, 2235
BspHI	TCATGA	2 cut(s)	472, 1293
BspLI	GGNNCC	3 cut(s)	222, 324, 991
BspMAI	CTGCAG	2 cut(s)	372, 1867
BspOI	GCTAGC	2 cut(s)	468, 1956
BspPI	GGATC	5 cut(s)	194, 224, 1051, 1082, 1853
BspT104I	TTCGAA	1 cut(s)	178
BspT107I	GGYRCC	1 cut(s)	989
BspTI	CTTAAG	1 cut(s)	1586
BspTNI	GGTCTC	1 cut(s)	758
BsrDI	GCAATG	3 cut(s)	280, 1230, 1689
BsrI	ACTGG	8 cut(s)	565, 1102, 1135, 1321, 1358, 1490, 2019, 2025
BssECI	CCNNGG	3 cut(s)	9, 1752, 1923
BssNI	GRCGYC	1 cut(s)	895
BssT1I	CCWWGG	3 cut(s)	9, 1752, 1923
Bst2UI	CCWGG	2 cut(s)	359, 1719
Bst4CI	ACNGT	3 cut(s)	1169, 1677, 2122
Bst6I	CTCTTC	3 cut(s)	417, 444, 2274
BstACI	GRCGYC	1 cut(s)	895
BstAFI	CTTAAG	1 cut(s)	1586
BstAPI	GCANNNNNTGC	1 cut(s)	609
BstBI	TTCGAA	1 cut(s)	178
BstC8I	GCNNGC	6 cut(s)	26, 466, 610, 1598, 1659, 1954
BstDSI	CCRYGG	1 cut(s)	9
BstF5I	GGATG	7 cut(s)	109, 424, 460, 640, 718, 1939, 2278
BstHHI	GCGC	2 cut(s)	1833, 1996
BstMAI	GTCTC	4 cut(s)	272, 419, 491, 758
BstMWI	GCNNNNNNNGC	7 cut(s)	14, 104, 113, 609, 1328, 1663, 1919
BstNI	CCWGG	2 cut(s)	359, 1719
BstNSI	RCATGY	3 cut(s)	848, 1199, 1516
BstSCI	CCNGG	5 cut(s)	223, 324, 357, 1717, 2305
BstSFI	CTRYAG	2 cut(s)	368, 1863
BstSLI	GKGCMC	1 cut(s)	994
BstV1I	GCAGC	4 cut(s)	910, 1127, 1381, 1453
BstV2I	GAAGAC	2 cut(s)	465, 1616
BstX2I	RGATCY	6 cut(s)	186, 229, 775, 1024, 1043, 1074
BstXI	CCANNNNNNTGG	2 cut(s)	919, 1142
BstYI	RGATCY	6 cut(s)	186, 229, 775, 1024, 1043, 1074
Bsu36I	CCTNAGG	1 cut(s)	941
BsuI	GTATCC	1 cut(s)	397
BsuRI	GGCC	5 cut(s)	8, 17, 1540, 1805, 2245
BtgI	CCRYGG	1 cut(s)	9
BtrI	CACGTC	1 cut(s)	1132
BtsCI	GGATG	7 cut(s)	109, 424, 460, 640, 718, 1939, 2278
BtsI	GCAGTG	2 cut(s)	603, 676
BtsIMutI	CAGTG	5 cut(s)	603, 676, 1682, 2012, 2032
Cac8I	GCNNGC	6 cut(s)	26, 466, 610, 1598, 1659, 1954
CaiI	CAGNNNCTG	1 cut(s)	1346
CciI	TCATGA	2 cut(s)	472, 1293
CfoI	GCGC	2 cut(s)	1833, 1996
Cfr13I	GGNCC	3 cut(s)	322, 1539, 2243
CseI	GACGC	5 cut(s)	436, 470, 508, 842, 884
Csp6I	GTAC	5 cut(s)	698, 949, 1479, 1578, 2219
CspCI	CAANNNNNGTGG	2 cut(s)	1738, 1773
CviQI	GTAC	5 cut(s)	698, 949, 1479, 1578, 2219
EaeI	YGGCCR	1 cut(s)	6
Eam1104I	CTCTTC	3 cut(s)	417, 444, 2274
EarI	CTCTTC	3 cut(s)	417, 444, 2274
Ecl136II	GAGCTC	2 cut(s)	739, 1309
Eco130I	CCWWGG	3 cut(s)	9, 1752, 1923
Eco24I	GRGCYC	2 cut(s)	741, 1311
Eco31I	GGTCTC	1 cut(s)	758
Eco32I	GATATC	1 cut(s)	879
Eco47I	GGWCC	1 cut(s)	322
Eco53kI	GAGCTC	2 cut(s)	739, 1309
Eco57I	CTGAAG	1 cut(s)	1628
Eco81I	CCTNAGG	1 cut(s)	941
Eco88I	CYCGRG	1 cut(s)	1614
EcoICRI	GAGCTC	2 cut(s)	739, 1309
EcoO109I	RGGNCCY	1 cut(s)	2243
EcoRI	GAATTC	1 cut(s)	2044
EcoRII	CCWGG	2 cut(s)	357, 1717
EcoRV	GATATC	1 cut(s)	879
EcoT14I	CCWWGG	3 cut(s)	9, 1752, 1923
EcoT38I	GRGCYC	2 cut(s)	741, 1311
ErhI	CCWWGG	3 cut(s)	9, 1752, 1923
Esp3I	CGTCTC	2 cut(s)	419, 491
FaqI	GGGAC	1 cut(s)	2117
FauI	CCCGC	1 cut(s)	100
FblI	GTMKAC	3 cut(s)	641, 1173, 1981
Fnu4HI	GCNGC	4 cut(s)	924, 1116, 1395, 1467
FokI	GGATG	7 cut(s)	116, 431, 467, 647, 725, 1946, 2285
FriOI	GRGCYC	2 cut(s)	741, 1311
Fsp4HI	GCNGC	4 cut(s)	924, 1116, 1395, 1467
GlaI	GCGC	2 cut(s)	1832, 1995
GluI	GCNGC	4 cut(s)	924, 1116, 1395, 1467
GsaI	CCCAGC	1 cut(s)	1043
GsuI	CTGGAG	2 cut(s)	4, 1338
HaeIII	GGCC	5 cut(s)	8, 17, 1540, 1805, 2245
HapII	CCGG	3 cut(s)	225, 326, 2306
HgaI	GACGC	5 cut(s)	436, 470, 508, 842, 884
HhaI	GCGC	2 cut(s)	1833, 1996
Hin1I	GRCGYC	1 cut(s)	895
Hin6I	GCGC	2 cut(s)	1831, 1994
HinP1I	GCGC	2 cut(s)	1831, 1994
HindIII	AAGCTT	1 cut(s)	594
HinfI	GANTC	8 cut(s)	299, 398, 533, 550, 638, 934, 2009, 2021
HpaII	CCGG	3 cut(s)	225, 326, 2306
HphI	GGTGA	4 cut(s)	98, 166, 449, 632
Hpy166II	GTNNAC	4 cut(s)	213, 642, 1174, 1982
Hpy8I	GTNNAC	4 cut(s)	213, 642, 1174, 1982
Hpy99I	CGWCG	2 cut(s)	1477, 2198
HpyCH4III	ACNGT	3 cut(s)	1169, 1677, 2122
HpyCH4IV	ACGT	3 cut(s)	261, 951, 1131
HpyCH4V	TGCA	9 cut(s)	116, 370, 543, 1032, 1115, 1187, 1743, 1865, 1871
HpyF10VI	GCNNNNNNNGC	7 cut(s)	14, 104, 113, 609, 1328, 1663, 1919
HpySE526I	ACGT	3 cut(s)	261, 951, 1131
Hsp92I	GRCGYC	1 cut(s)	895
HspAI	GCGC	2 cut(s)	1831, 1994
LmnI	GCTCC	6 cut(s)	244, 736, 744, 1319, 1680, 1783
Lsp1109I	GCAGC	4 cut(s)	910, 1127, 1381, 1453
LweI	GCATC	4 cut(s)	94, 1880, 2245, 2257
MaeII	ACGT	3 cut(s)	261, 951, 1131
MaeIII	GTNAC	3 cut(s)	53, 86, 1962
MfeI	CAATTG	1 cut(s)	999
MflI	RGATCY	6 cut(s)	186, 229, 775, 1024, 1043, 1074
MhlI	GDGCHC	6 cut(s)	152, 297, 741, 788, 994, 1311
MlsI	TGGCCA	1 cut(s)	8
MluNI	TGGCCA	1 cut(s)	8
MlyI	GAGTC	2 cut(s)	293, 647
MmeI	TCCRAC	4 cut(s)	714, 1205, 1433, 1911
Mox20I	TGGCCA	1 cut(s)	8
MroXI	GAANNNNTTC	2 cut(s)	596, 2008
MscI	TGGCCA	1 cut(s)	8
MslI	CAYNNNNRTG	4 cut(s)	618, 872, 2079, 2120
Msp20I	TGGCCA	1 cut(s)	8
MspCI	CTTAAG	1 cut(s)	1586
MspI	CCGG	3 cut(s)	225, 326, 2306
MspR9I	CCNGG	5 cut(s)	225, 326, 359, 1719, 2307
MunI	CAATTG	1 cut(s)	999
Mva1269I	GAATGC	4 cut(s)	241, 1032, 1117, 1455
MvaI	CCWGG	2 cut(s)	359, 1719
MwoI	GCNNNNNNNGC	7 cut(s)	14, 104, 113, 609, 1328, 1663, 1919
NciI	CCSGG	3 cut(s)	225, 326, 2307
NcoI	CCATGG	1 cut(s)	9
NheI	GCTAGC	2 cut(s)	464, 1952
NlaIV	GGNNCC	3 cut(s)	222, 324, 991
NmuCI	GTSAC	2 cut(s)	86, 1962
NspI	RCATGY	3 cut(s)	848, 1199, 1516
NspV	TTCGAA	1 cut(s)	178
OliI	CACNNNNGTG	2 cut(s)	618, 2120
PagI	TCATGA	2 cut(s)	472, 1293
PciI	ACATGT	1 cut(s)	844
PctI	GAATGC	4 cut(s)	241, 1032, 1117, 1455
PdmI	GAANNNNTTC	2 cut(s)	596, 2008
PfeI	GAWTC	6 cut(s)	398, 533, 550, 934, 2009, 2021
PkrI	GCNGC	4 cut(s)	925, 1117, 1396, 1468
PleI	GAGTC	2 cut(s)	293, 646
PpsI	GAGTC	2 cut(s)	293, 646
PscI	ACATGT	1 cut(s)	844
PshBI	ATTAAT	1 cut(s)	1890
PsiI	TTATAA	2 cut(s)	515, 1820
Psp124BI	GAGCTC	2 cut(s)	741, 1311
Psp6I	CCWGG	2 cut(s)	357, 1717
PspFI	CCCAGC	1 cut(s)	1039
PspGI	CCWGG	2 cut(s)	357, 1717
PspN4I	GGNNCC	3 cut(s)	222, 324, 991
PspPI	GGNCC	3 cut(s)	322, 1539, 2243
PstI	CTGCAG	2 cut(s)	372, 1867
PstNI	CAGNNNCTG	1 cut(s)	1346
PsuI	RGATCY	6 cut(s)	186, 229, 775, 1024, 1043, 1074
RsaI	GTAC	5 cut(s)	699, 950, 1480, 1579, 2220
RsaNI	GTAC	5 cut(s)	698, 949, 1479, 1578, 2219
RseI	CAYNNNNRTG	4 cut(s)	618, 872, 2079, 2120
SacI	GAGCTC	2 cut(s)	741, 1311
SatI	GCNGC	4 cut(s)	924, 1116, 1395, 1467
Sau96I	GGNCC	3 cut(s)	322, 1539, 2243
SchI	GAGTC	2 cut(s)	293, 647
ScrFI	CCNGG	5 cut(s)	225, 326, 359, 1719, 2307
SduI	GDGCHC	6 cut(s)	152, 297, 741, 788, 994, 1311
SfaNI	GCATC	4 cut(s)	94, 1880, 2245, 2257
SfcI	CTRYAG	2 cut(s)	368, 1863
SfiI	GGCCNNNNNGGCC	1 cut(s)	14
SfuI	TTCGAA	1 cut(s)	178
SinI	GGWCC	1 cut(s)	322
SmiMI	CAYNNNNRTG	4 cut(s)	618, 872, 2079, 2120
SmlI	CTYRAG	4 cut(s)	1304, 1586, 1880, 2361
SmoI	CTYRAG	4 cut(s)	1304, 1586, 1880, 2361
SpeI	ACTAGT	1 cut(s)	518
SsiI	CCGC	3 cut(s)	107, 601, 2270
SstI	GAGCTC	2 cut(s)	741, 1311
StyD4I	CCNGG	5 cut(s)	223, 324, 357, 1717, 2305
StyI	CCWWGG	3 cut(s)	9, 1752, 1923
TaaI	ACNGT	3 cut(s)	1169, 1677, 2122
TaiI	ACGT	3 cut(s)	264, 954, 1134
TaqI	TCGA	7 cut(s)	178, 297, 553, 1459, 1472, 2193, 2300
TatI	WGTACW	1 cut(s)	697
TfiI	GAWTC	6 cut(s)	398, 533, 550, 934, 2009, 2021
TscAI	CASTG	5 cut(s)	610, 676, 1682, 2019, 2032
TseFI	GTSAC	2 cut(s)	86, 1962
TseI	GCWGC	4 cut(s)	923, 1115, 1394, 1466
Tsp45I	GTSAC	2 cut(s)	86, 1962
TspGWI	ACGGA	4 cut(s)	231, 335, 1633, 1781
TspRI	CASTG	5 cut(s)	610, 676, 1682, 2019, 2032
Vha464I	CTTAAG	1 cut(s)	1586
VpaK11BI	GGWCC	1 cut(s)	322
VspI	ATTAAT	1 cut(s)	1890
XapI	RAATTY	1 cut(s)	2044
XceI	RCATGY	3 cut(s)	848, 1199, 1516
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2032
XmiI	GTMKAC	3 cut(s)	641, 1173, 1981
XmnI	GAANNNNTTC	2 cut(s)	596, 2008

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.