MD11G1035400.v1.1

Heterogeneous nuclear ribonucleoprotein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0009344
Physical Location & Seq
Reverse (-)
3105148 .. 3108192
3045 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1035400.v1.1.491

Sequence Viewer

Length: 1185 bp
ATGGGGGTAGATAATGTACTCCAGTCAAAAGCCCTAATCTTTATTCCTCGCGTCGCTCGCAACTCTCGAAGCTCGTACCTTTTCCTTTTCCTCAAATTTTCCCGAGAAAATCCGATTCCGAACGCAATGGGTTCGAAGTCGAATCCCGGCCATCCTCACTCAGGCGACGGCGCCAGCCCCGGAAAGATCTTCATTGGTGGATTAGCAAAAGACACTACATATGCTACGTTTACCAAGCACTTTGGGAAATATGGAGAGATAGTGGACTCAGTGATAATGAAAGATCGCTTCACCGGTACCCCTAGGGGCTTTGGGTTTATAACCTACGCCGATCCATCAGTTGTTGATACAGTTATTGAGGAAACTCATGTTATCAATGGAAAGGAGGTTGAGATCAAGAGAACCATTCCGAAAGGTCAAGGGCAATCAAAGGATTTTAGGACAAAGAAGATATTTGTGGGTGGCATTCCATCATCCGTCTCTGAGGATGAGTTGAAAAGTTTCTTCTCTGAGTATGGGAAAGTGGTAGAACACCAGATCATACGAGATCATGAGACCAATCGGTCTCGAGGCTTTGGGTTTGTAATTTTTGACAATGAGGAAGTTGTAGATGAATTGTTATCTAAAGGAAACATGATTGATATGGCGGGTACCCAGGTGGAGATCAAGAAAGCTGAACCAAAGAAAGCCTCAAATCCACCATCTGCTCCTGCATATGGTAGCAATTCTAGGGCTCGTTCTTTTAATGATGGCTTTGGTGGATATGGCAGTTCTTATGGTGGTTTTGATGGAGGGTTTGGCCCTGGACCCTATAGGACACCAGGTGGTCTTGGTGGTAGATATGGTGGTGGTTATGGCTACGGTTATGGTAGCGATAGTGGCGAATTTGGCAGTGGTTATGGTAGTTTTGGCAGCAGTAGCTTAGGTGGCTATCGTGGTGAGTCTTCTCTTGGTTATTCTAGCCGCTTTGGACCATACGGTGGTGGTTATGGTGGGGGCTATGGTGCAAGTGGTTTAGGTGGTTATGGCCGTGGTGGTGAAGGCTATGGAAGTTACGGAGGTTCAAACTATGGTGGTGGTGGCTATGACTCTTATCCTGGTGCTACTTATGGTGGAGGAGCAGGTGGACCATATGGAAGGGGGGGATATAATAGCAGTAGTCGGTACCACCCCTATGGAAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000578 GO:0000902 GO:0000904 GO:0001667 GO:0002064 GO:0002065 GO:0002066 GO:0003002 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006403 GO:0006417 GO:0006928 GO:0006935 GO:0007028 GO:0007275 GO:0007276 GO:0007281 GO:0007292 GO:0007297 GO:0007298 GO:0007308 GO:0007309 GO:0007314 GO:0007315 GO:0007316 GO:0007319 GO:0007350 GO:0007351 GO:0007389 GO:0007399 GO:0007409 GO:0007411 GO:0008150 GO:0008298 GO:0008358 GO:0008595 GO:0009605 GO:0009653 GO:0009790 GO:0009798 GO:0009880 GO:0009888 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009948 GO:0009952 GO:0009987 GO:0009994 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0010631 GO:0016043 GO:0016477 GO:0017148 GO:0019094 GO:0019219 GO:0019222 GO:0019953 GO:0021700 GO:0022008 GO:0022412 GO:0022414 GO:0022607 GO:0030030 GO:0030154 GO:0030182 GO:0030707 GO:0030855 GO:0031175 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032270 GO:0032501 GO:0032502 GO:0032504 GO:0032989 GO:0032990 GO:0032991 GO:0033036 GO:0034248 GO:0034249 GO:0034250 GO:0035282 GO:0035770 GO:0036464 GO:0040011 GO:0042221 GO:0042330 GO:0043186 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043484 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0045451 GO:0045495 GO:0045727 GO:0046011 GO:0048024 GO:0048027 GO:0048468 GO:0048469 GO:0048477 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048599 GO:0048609 GO:0048666 GO:0048667 GO:0048699 GO:0048731 GO:0048812 GO:0048856 GO:0048858 GO:0048869 GO:0048870 GO:0050684 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051246 GO:0051247 GO:0051248 GO:0051252 GO:0051641 GO:0051674 GO:0051704 GO:0060255 GO:0060293 GO:0060429 GO:0060810 GO:0060811 GO:0061564 GO:0065007 GO:0070013 GO:0070727 GO:0071840 GO:0080090 GO:0090130 GO:0090132 GO:0097159 GO:0097485 GO:0120036 GO:0120039 GO:1901363 GO:1903311 GO:1990904 GO:2000112 GO:2000113
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
RRM_1

Protein Analysis

395

Amino Acids

41.46

Weight (kDa)

9.04

Isoelectric Point (pI)

27.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 63 - 123 3.8e-13 RNA recognition motif
RRM_7 PF16367 149 - 211 2.1e-09 RNA recognition motif
RRM_1 PF00076 151 - 214 3.1e-17 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 320
AarI CACCTGC 1 cut(s) 1112
AasI GACNNNNNNGTC 1 cut(s) 562
Acc36I ACCTGC 1 cut(s) 1112
Acc65I GGTACC 3 cut(s) 296, 650, 1164
AccB1I GGYRCC 4 cut(s) 170, 296, 650, 1164
AccB7I CCANNNNNTGG 1 cut(s) 980
AccII CGCG 1 cut(s) 51
AciI CCGC 2 cut(s) 647, 964
AclWI GGATC 1 cut(s) 326
AcoI YGGCCR 2 cut(s) 148, 1027
AcsI RAATTY 2 cut(s) 95, 884
AcyI GRCGYC 1 cut(s) 171
AdeI CACNNNGTG 1 cut(s) 824
AfaI GTAC 5 cut(s) 18, 77, 298, 652, 1166
AfiI CCNNNNNNNGG 4 cut(s) 161, 716, 980, 1179
AgeI ACCGGT 1 cut(s) 293
AgsI TTSAA 2 cut(s) 496, 1065
AjnI CCWGG 4 cut(s) 654, 802, 820, 1096
AluBI AGCT 3 cut(s) 72, 674, 921
AluI AGCT 3 cut(s) 72, 674, 921
Alw26I GTCTC 3 cut(s) 484, 548, 570
AlwI GGATC 1 cut(s) 326
Ama87I CYCGRG 2 cut(s) 102, 567
AoxI GGCC 3 cut(s) 148, 799, 1027
ApeKI GCWGC 1 cut(s) 912
ApoI RAATTY 2 cut(s) 95, 884
AsiGI ACCGGT 1 cut(s) 293
Asp700I GAANNNNTTC 1 cut(s) 500
Asp718I GGTACC 3 cut(s) 296, 650, 1164
AspA2I CCTAGG 1 cut(s) 302
AspLEI GCGC 1 cut(s) 173
AspS9I GGNCC 4 cut(s) 800, 806, 971, 1127
AsuC2I CCSGG 2 cut(s) 147, 180
AsuHPI GGTGA 3 cut(s) 283, 950, 1049
AsuII TTCGAA 1 cut(s) 134
AvaI CYCGRG 2 cut(s) 102, 567
AvaII GGWCC 3 cut(s) 806, 971, 1127
AvrII CCTAGG 1 cut(s) 302
BaeI ACNNNNGTAYC 2 cut(s) 642, 675
BanI GGYRCC 4 cut(s) 170, 296, 650, 1164
BanII GRGCYC 1 cut(s) 736
BbsI GAAGAC 1 cut(s) 936
BbvI GCAGC 1 cut(s) 924
BccI CCATC 6 cut(s) 159, 343, 478, 709, 743, 782
BceAI ACGGC 2 cut(s) 184, 1014
BcgI CGANNNNNNTGC 2 cut(s) 114, 148
BciT130I CCWGG 4 cut(s) 656, 804, 822, 1098
BcnI CCSGG 2 cut(s) 147, 180
BcoDI GTCTC 3 cut(s) 484, 548, 570
BfaI CTAG 3 cut(s) 303, 729, 960
BfmI CTRYAG 1 cut(s) 811
BfoI RGCGCY 1 cut(s) 174
BfuAI ACCTGC 1 cut(s) 1112
BglII AGATCT 1 cut(s) 186
BisI GCNGC 2 cut(s) 913, 964
BlnI CCTAGG 1 cut(s) 302
BlsI GCNGC 2 cut(s) 914, 965
Bme1390I CCNGG 6 cut(s) 147, 180, 656, 804, 822, 1098
Bme18I GGWCC 3 cut(s) 806, 971, 1127
BmeT110I CYCGRG 2 cut(s) 102, 567
BmgT120I GGNCC 4 cut(s) 800, 806, 971, 1127
BmiI GGNNCC 5 cut(s) 172, 298, 652, 808, 1166
BmrFI CCNGG 6 cut(s) 147, 180, 656, 804, 822, 1098
BpiI GAAGAC 1 cut(s) 936
BpmI CTGGAG 1 cut(s) 5
Bpu10I CCTNAGC 1 cut(s) 922
Bpu14I TTCGAA 1 cut(s) 134
BpuMI CCSGG 2 cut(s) 147, 180
BsaHI GRCGYC 1 cut(s) 171
BsaI GGTCTC 2 cut(s) 548, 570
BsaJI CCNNGG 5 cut(s) 178, 302, 654, 802, 1030
BsaWI WCCGGW 1 cut(s) 293
BsaXI ACNNNNNCTCC 2 cut(s) 246, 276
Bsc4I CCNNNNNNNGG 4 cut(s) 161, 716, 980, 1179
Bse118I RCCGGY 1 cut(s) 293
Bse1I ACTGG 1 cut(s) 22
Bse3DI GCAATG 1 cut(s) 132
BseBI CCWGG 4 cut(s) 656, 804, 822, 1098
BseDI CCNNGG 5 cut(s) 178, 302, 654, 802, 1030
BseGI GGATG 3 cut(s) 151, 473, 493
BseLI CCNNNNNNNGG 4 cut(s) 161, 716, 980, 1179
BseMI GCAATG 1 cut(s) 132
BseMII CTCAG 4 cut(s) 174, 282, 474, 501
BseNI ACTGG 1 cut(s) 22
BseRI GAGGAG 1 cut(s) 1131
BseXI GCAGC 1 cut(s) 924
Bsh1236I CGCG 1 cut(s) 51
BshFI GGCC 3 cut(s) 150, 801, 1029
BshNI GGYRCC 4 cut(s) 170, 296, 650, 1164
BshTI ACCGGT 1 cut(s) 293
BsiHKCI CYCGRG 2 cut(s) 102, 567
BsiSI CCGG 3 cut(s) 147, 180, 294
BslI CCNNNNNNNGG 4 cut(s) 161, 716, 980, 1179
BsmAI GTCTC 3 cut(s) 484, 548, 570
BsmBI CGTCTC 1 cut(s) 484
BsmI GAATGC 1 cut(s) 465
BsnI GGCC 3 cut(s) 150, 801, 1029
Bso31I GGTCTC 2 cut(s) 548, 570
BsoBI CYCGRG 2 cut(s) 102, 567
Bsp119I TTCGAA 1 cut(s) 134
Bsp1286I GDGCHC 1 cut(s) 736
Bsp143I GATC 7 cut(s) 186, 283, 331, 393, 537, 547, 663
BspACI CCGC 2 cut(s) 647, 964
BspANI GGCC 3 cut(s) 150, 801, 1029
BspCNI CTCAG 4 cut(s) 173, 281, 475, 502
BspFNI CGCG 1 cut(s) 51
BspHI TCATGA 1 cut(s) 550
BspLI GGNNCC 5 cut(s) 172, 298, 652, 808, 1166
BspMI ACCTGC 1 cut(s) 1112
BspPI GGATC 1 cut(s) 326
BspT104I TTCGAA 1 cut(s) 134
BspT107I GGYRCC 4 cut(s) 170, 296, 650, 1164
BspTNI GGTCTC 2 cut(s) 548, 570
BsrDI GCAATG 1 cut(s) 132
BsrFI RCCGGY 1 cut(s) 293
BsrI ACTGG 1 cut(s) 22
BssAI RCCGGY 1 cut(s) 293
BssECI CCNNGG 5 cut(s) 178, 302, 654, 802, 1030
BssMI GATC 7 cut(s) 186, 283, 331, 393, 537, 547, 663
BssNI GRCGYC 1 cut(s) 171
BssT1I CCWWGG 1 cut(s) 302
Bst2UI CCWGG 4 cut(s) 656, 804, 822, 1098
Bst4CI ACNGT 3 cut(s) 352, 863, 980
BstACI GRCGYC 1 cut(s) 171
BstBI TTCGAA 1 cut(s) 134
BstC8I GCNNGC 2 cut(s) 58, 175
BstDEI CTNAG 5 cut(s) 160, 268, 483, 510, 922
BstDSI CCRYGG 1 cut(s) 1030
BstENI CCTNNNNNAGG 2 cut(s) 159, 1177
BstF5I GGATG 3 cut(s) 151, 473, 493
BstFNI CGCG 1 cut(s) 51
BstH2I RGCGCY 1 cut(s) 174
BstHHI GCGC 1 cut(s) 173
BstKTI GATC 7 cut(s) 189, 286, 334, 396, 540, 550, 666
BstMAI GTCTC 3 cut(s) 484, 548, 570
BstMBI GATC 7 cut(s) 186, 283, 331, 393, 537, 547, 663
BstMWI GCNNNNNNNGC 5 cut(s) 57, 879, 888, 918, 927
BstNI CCWGG 4 cut(s) 656, 804, 822, 1098
BstSCI CCNGG 6 cut(s) 145, 178, 654, 802, 820, 1096
BstSFI CTRYAG 1 cut(s) 811
BstUI CGCG 1 cut(s) 51
BstV1I GCAGC 1 cut(s) 924
BstV2I GAAGAC 1 cut(s) 936
BstX2I RGATCY 1 cut(s) 186
BstXI CCANNNNNNTGG 1 cut(s) 1175
BstYI RGATCY 1 cut(s) 186
BsuRI GGCC 3 cut(s) 150, 801, 1029
BtgI CCRYGG 1 cut(s) 1030
BtsCI GGATG 3 cut(s) 151, 473, 493
BtsI GCAGTG 1 cut(s) 898
BtsIMutI CAGTG 2 cut(s) 276, 898
BveI ACCTGC 1 cut(s) 1112
Cac8I GCNNGC 2 cut(s) 58, 175
CciI TCATGA 1 cut(s) 550
CfoI GCGC 1 cut(s) 173
Cfr10I RCCGGY 1 cut(s) 293
Cfr13I GGNCC 4 cut(s) 800, 806, 971, 1127
CseI GACGC 1 cut(s) 40
CsiI ACCWGGT 1 cut(s) 820
Csp6I GTAC 5 cut(s) 17, 76, 297, 651, 1165
CspAI ACCGGT 1 cut(s) 293
CviAII CATG 3 cut(s) 368, 551, 634
CviQI GTAC 5 cut(s) 17, 76, 297, 651, 1165
DdeI CTNAG 5 cut(s) 160, 268, 483, 510, 922
DinI GGCGCC 1 cut(s) 172
DpnI GATC 7 cut(s) 188, 285, 333, 395, 539, 549, 665
DpnII GATC 7 cut(s) 186, 283, 331, 393, 537, 547, 663
DraIII CACNNNGTG 1 cut(s) 824
DrdI GACNNNNNNGTC 1 cut(s) 562
DseDI GACNNNNNNGTC 1 cut(s) 562
EaeI YGGCCR 2 cut(s) 148, 1027
Eco130I CCWWGG 1 cut(s) 302
Eco24I GRGCYC 1 cut(s) 736
Eco31I GGTCTC 2 cut(s) 548, 570
Eco47I GGWCC 3 cut(s) 806, 971, 1127
Eco88I CYCGRG 2 cut(s) 102, 567
EcoNI CCTNNNNNAGG 2 cut(s) 159, 1177
EcoRII CCWGG 4 cut(s) 654, 802, 820, 1096
EcoT14I CCWWGG 1 cut(s) 302
EcoT38I GRGCYC 1 cut(s) 736
EgeI GGCGCC 1 cut(s) 172
EheI GGCGCC 1 cut(s) 172
ErhI CCWWGG 1 cut(s) 302
Esp3I CGTCTC 1 cut(s) 484
FaeI CATG 3 cut(s) 371, 554, 637
FatI CATG 3 cut(s) 367, 550, 633
FauI CCCGC 1 cut(s) 640
FauNDI CATATG 3 cut(s) 220, 715, 1132
Fnu4HI GCNGC 2 cut(s) 913, 964
FokI GGATG 3 cut(s) 138, 460, 500
FriOI GRGCYC 1 cut(s) 736
Fsp4HI GCNGC 2 cut(s) 913, 964
FspBI CTAG 3 cut(s) 303, 729, 960
GlaI GCGC 1 cut(s) 172
GluI GCNGC 2 cut(s) 913, 964
GsuI CTGGAG 1 cut(s) 5
HaeII RGCGCY 1 cut(s) 174
HaeIII GGCC 3 cut(s) 150, 801, 1029
HapII CCGG 3 cut(s) 147, 180, 294
HgaI GACGC 1 cut(s) 40
HhaI GCGC 1 cut(s) 173
Hin1I GRCGYC 1 cut(s) 171
Hin1II CATG 3 cut(s) 371, 554, 637
Hin6I GCGC 1 cut(s) 171
HinP1I GCGC 1 cut(s) 171
HinfI GANTC 5 cut(s) 115, 142, 266, 941, 1088
HpaII CCGG 3 cut(s) 147, 180, 294
HphI GGTGA 3 cut(s) 283, 950, 1049
Hpy166II GTNNAC 3 cut(s) 231, 265, 1127
Hpy188I TCNGA 5 cut(s) 114, 120, 411, 484, 511
Hpy188III TCNNGA 6 cut(s) 66, 102, 397, 551, 567, 667
Hpy8I GTNNAC 3 cut(s) 231, 265, 1127
Hpy99I CGWCG 2 cut(s) 56, 170
HpyAV CCTTC 3 cut(s) 1034, 1131, 1173
HpyCH4III ACNGT 3 cut(s) 352, 863, 980
HpyCH4IV ACGT 1 cut(s) 227
HpyCH4V TGCA 2 cut(s) 713, 1007
HpyF10VI GCNNNNNNNGC 5 cut(s) 57, 879, 888, 918, 927
HpyF3I CTNAG 5 cut(s) 160, 268, 483, 510, 922
HpySE526I ACGT 1 cut(s) 227
Hsp92I GRCGYC 1 cut(s) 171
Hsp92II CATG 3 cut(s) 371, 554, 637
HspAI GCGC 1 cut(s) 171
KasI GGCGCC 1 cut(s) 170
KpnI GGTACC 3 cut(s) 300, 654, 1168
Kzo9I GATC 7 cut(s) 186, 283, 331, 393, 537, 547, 663
LmnI GCTCC 2 cut(s) 712, 1118
Lsp1109I GCAGC 1 cut(s) 924
MabI ACCWGGT 1 cut(s) 820
MaeI CTAG 3 cut(s) 303, 729, 960
MaeII ACGT 1 cut(s) 227
MaeIII GTNAC 1 cut(s) 1052
MalI GATC 7 cut(s) 188, 285, 333, 395, 539, 549, 665
MboI GATC 7 cut(s) 186, 283, 331, 393, 537, 547, 663
MboII GAAGA 4 cut(s) 181, 460, 496, 936
MflI RGATCY 1 cut(s) 186
MhlI GDGCHC 1 cut(s) 736
MluCI AATT 5 cut(s) 95, 585, 614, 724, 884
Mly113I GGCGCC 1 cut(s) 171
MlyI GAGTC 3 cut(s) 260, 950, 1082
MroXI GAANNNNTTC 1 cut(s) 500
MseI TTAA 1 cut(s) 744
MslI CAYNNNNRTG 1 cut(s) 1173
MspI CCGG 3 cut(s) 147, 180, 294
MspR9I CCNGG 6 cut(s) 147, 180, 656, 804, 822, 1098
Mva1269I GAATGC 1 cut(s) 465
MvaI CCWGG 4 cut(s) 656, 804, 822, 1098
MvnI CGCG 1 cut(s) 51
MwoI GCNNNNNNNGC 5 cut(s) 57, 879, 888, 918, 927
NarI GGCGCC 1 cut(s) 171
NciI CCSGG 2 cut(s) 147, 180
NdeI CATATG 3 cut(s) 220, 715, 1132
NdeII GATC 7 cut(s) 186, 283, 331, 393, 537, 547, 663
NlaIII CATG 3 cut(s) 371, 554, 637
NlaIV GGNNCC 5 cut(s) 172, 298, 652, 808, 1166
NspV TTCGAA 1 cut(s) 134
PaeR7I CTCGAG 1 cut(s) 567
PagI TCATGA 1 cut(s) 550
PaqCI CACCTGC 1 cut(s) 1112
PcsI WCGNNNNNNNCGW 1 cut(s) 64
PctI GAATGC 1 cut(s) 465
PdmI GAANNNNTTC 1 cut(s) 500
PfeI GAWTC 2 cut(s) 115, 142
PflMI CCANNNNNTGG 1 cut(s) 980
PinAI ACCGGT 1 cut(s) 293
PkrI GCNGC 2 cut(s) 914, 965
PleI GAGTC 3 cut(s) 260, 949, 1082
PluTI GGCGCC 1 cut(s) 174
PpsI GAGTC 3 cut(s) 260, 949, 1082
PsiI TTATAA 1 cut(s) 320
Psp6I CCWGG 4 cut(s) 654, 802, 820, 1096
PspGI CCWGG 4 cut(s) 654, 802, 820, 1096
PspN4I GGNNCC 5 cut(s) 172, 298, 652, 808, 1166
PspPI GGNCC 4 cut(s) 800, 806, 971, 1127
PsuI RGATCY 1 cut(s) 186
RsaI GTAC 5 cut(s) 18, 77, 298, 652, 1166
RsaNI GTAC 5 cut(s) 17, 76, 297, 651, 1165
RseI CAYNNNNRTG 1 cut(s) 1173
SaqAI TTAA 1 cut(s) 744
SatI GCNGC 2 cut(s) 913, 964
Sau3AI GATC 7 cut(s) 186, 283, 331, 393, 537, 547, 663
Sau96I GGNCC 4 cut(s) 800, 806, 971, 1127
SchI GAGTC 3 cut(s) 260, 950, 1082
ScrFI CCNGG 6 cut(s) 147, 180, 656, 804, 822, 1098
SduI GDGCHC 1 cut(s) 736
SexAI ACCWGGT 1 cut(s) 820
SfcI CTRYAG 1 cut(s) 811
SfoI GGCGCC 1 cut(s) 172
Sfr274I CTCGAG 1 cut(s) 567
SfuI TTCGAA 1 cut(s) 134
SinI GGWCC 3 cut(s) 806, 971, 1127
SlaI CTCGAG 1 cut(s) 567
SmiMI CAYNNNNRTG 1 cut(s) 1173
SmlI CTYRAG 1 cut(s) 567
SmoI CTYRAG 1 cut(s) 567
Sse9I AATT 5 cut(s) 95, 585, 614, 724, 884
SsiI CCGC 2 cut(s) 647, 964
SspDI GGCGCC 1 cut(s) 170
SspMI CTAG 3 cut(s) 303, 729, 960
StyD4I CCNGG 6 cut(s) 145, 178, 654, 802, 820, 1096
StyI CCWWGG 1 cut(s) 302
TaaI ACNGT 3 cut(s) 352, 863, 980
TaiI ACGT 1 cut(s) 230
TaqI TCGA 4 cut(s) 67, 134, 140, 568
TaqII GACCGA 1 cut(s) 552
TasI AATT 5 cut(s) 95, 585, 614, 724, 884
TatI WGTACW 1 cut(s) 16
TauI GCSGC 1 cut(s) 966
TfiI GAWTC 2 cut(s) 115, 142
Tru1I TTAA 1 cut(s) 744
Tru9I TTAA 1 cut(s) 744
TscAI CASTG 2 cut(s) 276, 898
TseI GCWGC 1 cut(s) 912
TspDTI ATGAA 3 cut(s) 181, 293, 627
TspGWI ACGGA 2 cut(s) 466, 1071
TspRI CASTG 2 cut(s) 276, 898
Van91I CCANNNNNTGG 1 cut(s) 980
VpaK11BI GGWCC 3 cut(s) 806, 971, 1127
XagI CCTNNNNNAGG 2 cut(s) 159, 1177
XapI RAATTY 2 cut(s) 95, 884
XhoI CTCGAG 1 cut(s) 567
XmaJI CCTAGG 1 cut(s) 302
XmnI GAANNNNTTC 1 cut(s) 500
XspI CTAG 3 cut(s) 303, 729, 960
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.