PPR repeat
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G28280 AT4G28280 AT4G28280 |
| malus_domestica | MD03G1042100.v1.1 MD11G1044400.v1.1 MD11G1045000.v1.1 |
| prunus_persica | Prupe.6G034000_v2.0.a1 |
| pyrus_communis | pycom03g03260 |
| rosa_chinensis | RchiOBHm_Chr5g0074761 |
| rosa_laevigata | RLG00000036502 |
| rosa_multiflora | Rmu_sc0000909.1_g000018 |
| rosa_roxburghii | Rroxscaffold_1G00006820 |
| rosa_rugosa | Rorug05G0433700 |
| rosa_samantha | Rh5AG491400 Rh5BG512800 Rh5CG536500 |
| rosa_wichuraiana | Rw5G045510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 23 |
| AciI | CCGC | 1 cut(s) | 126 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 66, 98 |
| BanI | GGYRCC | 1 cut(s) | 23 |
| BccI | CCATC | 1 cut(s) | 14 |
| BceAI | ACGGC | 1 cut(s) | 11 |
| BmiI | GGNNCC | 1 cut(s) | 25 |
| BshNI | GGYRCC | 1 cut(s) | 23 |
| BspACI | CCGC | 1 cut(s) | 126 |
| BspLI | GGNNCC | 1 cut(s) | 25 |
| BspT107I | GGYRCC | 1 cut(s) | 23 |
| BstC8I | GCNNGC | 1 cut(s) | 65 |
| BstNSI | RCATGY | 1 cut(s) | 157 |
| Cac8I | GCNNGC | 1 cut(s) | 65 |
| CviAII | CATG | 3 cut(s) | 32, 148, 154 |
| FaeI | CATG | 3 cut(s) | 35, 151, 157 |
| FaiI | YATR | 5 cut(s) | 33, 60, 149, 155, 160 |
| FatI | CATG | 3 cut(s) | 31, 147, 153 |
| Hin1II | CATG | 3 cut(s) | 35, 151, 157 |
| Hpy166II | GTNNAC | 1 cut(s) | 48 |
| Hpy188III | TCNNGA | 1 cut(s) | 165 |
| Hpy8I | GTNNAC | 1 cut(s) | 48 |
| HpyCH4V | TGCA | 1 cut(s) | 120 |
| Hsp92II | CATG | 3 cut(s) | 35, 151, 157 |
| LpnPI | CCDG | 1 cut(s) | 49 |
| MboII | GAAGA | 1 cut(s) | 125 |
| MluCI | AATT | 1 cut(s) | 87 |
| MnlI | CCTC | 2 cut(s) | 28, 153 |
| MslI | CAYNNNNRTG | 1 cut(s) | 152 |
| NlaIII | CATG | 3 cut(s) | 35, 151, 157 |
| NlaIV | GGNNCC | 1 cut(s) | 25 |
| NspI | RCATGY | 1 cut(s) | 157 |
| PspN4I | GGNNCC | 1 cut(s) | 25 |
| RseI | CAYNNNNRTG | 1 cut(s) | 152 |
| SetI | ASST | 1 cut(s) | 39 |
| SgeI | CNNG | 3 cut(s) | 44, 76, 160 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 152 |
| Sse9I | AATT | 1 cut(s) | 87 |
| SsiI | CCGC | 1 cut(s) | 126 |
| TasI | AATT | 1 cut(s) | 87 |
| TspDTI | ATGAA | 1 cut(s) | 44 |
| XceI | RCATGY | 1 cut(s) | 157 |