Rmu_sc0000909.1_g000018

PPR repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000909.1
OG0013877
Physical Location & Seq
Forward (+)
66648 .. 70368
3721 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000909.1_g000018.1.cds

Sequence Viewer

Length: 2160 bp
atggtgttgaatcagagcttcagcttctgttttgctgctctcttcttcttcttcattttgttgggtctccctgcttcttcttcatcttctcccactttcatttcagatggtatctttgaatctcaggtttctattggccggaacctactgcaggccaagaaaggttgtccagtaaactttgagtttttgaactactccatcatcacaaaccaatgcaaaggaccacgataccctgctgacaagtgttgtgcttcattcaaggaattggcttgcccttatacagatgtattgaacgacttgacaaatgaatgtgcttctattatgttcagctacatcaacctctatggaaactaccctcctggcctttttgccaacgagtgccgcgaggggaaattgggtcttgcatgccctgcattaccgccttcaactttggctgatgatgtaaacggggttcataccacctcctctccatctccattgctaatgctcacagctggtttcctattgttgctgttccgacttcacatggctgctgttgctcctccatcacttcccaaccagaacaaattaccatccttctcgtcgagaattctagctggaatgccggcccccgttgttttgcttcaaatgtgcagcaactttcaagaagtaagacaagttcatgctcaattggttgtatcaggactaattgagcgccctataaatggtgggaggcttcttcaggcctatgtcacagtgtcaaactataactatgcattatcaacttttgatagcatatctaatcctgatgtgtttgcctacaataccatgatgagaggtttaatactgggtaagtccccttatcatgcactgaagctctatagtaggcttttactagatggtttaaaaccagacaattacacctacacctttgttctcaaagcatgttcccaagtgaatgcgctcttcgaaggtagagaagtgcacggccggataattaaggccggaatagcaccagatacttacattcatagttcactgataaacatgtactcgagttcatcagatggtttggtctgtgcagagcgagttttagctggcttttccgaggataacacacttgctaagaactccttgatttcgggttacctcagtcagggtcaggtagaaagcgctagaaaaatgttcgataacctggtagcaaaggatgatgcatcttggagtgcaatggtagcagggtacacaaagaatggtatgtatgcagaggcattagtcatctttcgaaagatgttgagttctcaagtttctccaaatgaatcagcacttgtgagctcattgtgtgcttgtgctaatttgggagcactagaccaaggcaaatggatacatgcatacattgatagaattggggctaggattagtgtcactgtgggtactgctcttatagacatgtatgcaaagtgtggcagcatagaaaatgcctatgaagttttcaggaagatgccacagaaagacgtagtttcatggggagctatcatttctggtttcgccattcatgggcgagctgcaaaatgttttgaattgtttgatgatatggttgctcgtggaattcacccaaatgaagtaatttttgtaggtattttatcggcttgttctcatgccgggtatgttgaaacaggatacaagtactttgaccaaatggtttatcattatgggataaaaccatccattgaacattatggatgcatggtggatcttcttggtcgtgcagggcggctggcagaggcagaagggttcatcatgtcaatgccggaacagcctaactcggttatatggggtgcatttcttggtgcttgtagaatgcacagtgacgtgaggagaggtaaccttgctttcaagcacttgactgatcttgaaccaacgtctggtgacagatacaaacttgcaggaattatgtttgctagtgctggggaaaaggaaaatgctactaaaattaggacgatcatcacagataatgacttggagacaactcgtggagtaagctcaattgagatagatggtgaagtccacgagtttgtagcaggtaccatcaaccatagcaggcacaaagaaatttacagaatgtgggagagggttaataggttattagaaatccatgagcttgaaatttgcattccattctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

719

Amino Acids

79.08

Weight (kDa)

6.42

Isoelectric Point (pI)

41.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013877)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G28280 AT4G28280 AT4G28280
malus_domestica MD03G1042100.v1.1 MD11G1044400.v1.1 MD11G1045000.v1.1
prunus_persica Prupe.6G034000_v2.0.a1
pyrus_communis pycom03g03260
rosa_chinensis RchiOBHm_Chr5g0074761
rosa_laevigata RLG00000036502
rosa_multiflora Rmu_sc0000909.1_g000018
rosa_roxburghii Rroxscaffold_1G00006820
rosa_rugosa Rorug05G0433700
rosa_samantha Rh5AG491400 Rh5BG512800 Rh5CG536500
rosa_wichuraiana Rw5G045510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2048
Acc65I GGTACC 1 cut(s) 2060
AccB1I GGYRCC 1 cut(s) 2060
AccB7I CCANNNNNTGG 1 cut(s) 1901
AccII CGCG 1 cut(s) 384
AciI CCGC 3 cut(s) 382, 419, 1750
AclWI GGATC 1 cut(s) 1737
AcoI YGGCCR 2 cut(s) 136, 967
AcsI RAATTY 4 cut(s) 588, 1584, 2088, 2142
AcuI CTGAAG 3 cut(s) 4, 704, 872
AfaI GTAC 5 cut(s) 1031, 1220, 1411, 1664, 2062
AfeI AGCGCT 1 cut(s) 1153
AfiI CCNNNNNNNGG 5 cut(s) 151, 704, 1135, 1533, 1901
AflIII ACRYGT 2 cut(s) 1026, 1425
AjiI CACGTC 1 cut(s) 1849
AjnI CCWGG 2 cut(s) 358, 1173
Alw21I GWGCWC 3 cut(s) 966, 1313, 1342
Alw26I GTCTC 2 cut(s) 71, 1994
Alw44I GTGCAC 1 cut(s) 962
AlwI GGATC 1 cut(s) 1737
AlwNI CAGNNNCTG 1 cut(s) 27
Ama87I CYCGRG 1 cut(s) 1033
Aor51HI AGCGCT 1 cut(s) 1153
AoxI GGCC 7 cut(s) 136, 153, 361, 606, 723, 967, 981
ApaLI GTGCAC 1 cut(s) 962
ApeKI GCWGC 5 cut(s) 35, 530, 633, 1443, 1541
ApoI RAATTY 4 cut(s) 588, 1584, 2088, 2142
Asp718I GGTACC 1 cut(s) 2060
AspLEI GCGC 3 cut(s) 696, 943, 1154
AspS9I GGNCC 2 cut(s) 221, 607
AsuC2I CCSGG 1 cut(s) 1639
AsuHPI GGTGA 3 cut(s) 1580, 1916, 2048
AsuII TTCGAA 2 cut(s) 948, 1261
AvaI CYCGRG 1 cut(s) 1033
AvaII GGWCC 1 cut(s) 221
BaeGI GKGCMC 1 cut(s) 966
BanI GGYRCC 1 cut(s) 2060
BanII GRGCYC 1 cut(s) 1313
BauI CACGAG 3 cut(s) 1578, 2007, 2045
Bbv12I GWGCWC 3 cut(s) 966, 1313, 1342
BbvI GCAGC 5 cut(s) 22, 517, 645, 1455, 1528
BceAI ACGGC 1 cut(s) 982
BciT130I CCWGG 2 cut(s) 360, 1175
BciVI GTATCC 2 cut(s) 1353, 1649
BcnI CCSGG 1 cut(s) 1639
BcoDI GTCTC 2 cut(s) 71, 1994
BfaI CTAG 7 cut(s) 593, 875, 1155, 1343, 1389, 1938, 2158
BfmI CTRYAG 2 cut(s) 149, 859
BfoI RGCGCY 2 cut(s) 697, 1155
BfuAI ACCTGC 1 cut(s) 2048
BfuI GTATCC 2 cut(s) 1353, 1649
BisI GCNGC 7 cut(s) 36, 382, 531, 634, 1444, 1542, 1751
BlsI GCNGC 7 cut(s) 37, 383, 532, 635, 1445, 1543, 1752
BmcAI AGTACT 1 cut(s) 1664
Bme1390I CCNGG 3 cut(s) 360, 1175, 1639
Bme18I GGWCC 1 cut(s) 221
BmeT110I CYCGRG 1 cut(s) 1033
BmgBI CACGTC 1 cut(s) 1849
BmgT120I GGNCC 2 cut(s) 221, 607
BmiI GGNNCC 3 cut(s) 143, 609, 2062
BmrFI CCNGG 3 cut(s) 360, 1175, 1639
BmrI ACTGGG 1 cut(s) 836
BmsI GCATC 4 cut(s) 1180, 1202, 1467, 1709
BmuI ACTGGG 1 cut(s) 836
Bpu14I TTCGAA 2 cut(s) 948, 1261
BpuEI CTTGAG 1 cut(s) 1263
BpuMI CCSGG 1 cut(s) 1639
BsaI GGTCTC 1 cut(s) 71
BsaJI CCNNGG 2 cut(s) 1086, 1348
BsaXI ACNNNNNCTCC 2 cut(s) 451, 481
Bsc4I CCNNNNNNNGG 5 cut(s) 151, 704, 1135, 1533, 1901
Bse118I RCCGGY 1 cut(s) 604
Bse1I ACTGG 2 cut(s) 170, 831
Bse3DI GCAATG 2 cut(s) 476, 1212
BseBI CCWGG 2 cut(s) 360, 1175
BseDI CCNNGG 2 cut(s) 1086, 1348
BseGI GGATG 4 cut(s) 572, 1192, 1700, 1724
BseLI CCNNNNNNNGG 5 cut(s) 151, 704, 1135, 1533, 1901
BseMI GCAATG 2 cut(s) 476, 1212
BseMII CTCAG 2 cut(s) 137, 1144
BseNI ACTGG 2 cut(s) 170, 831
BseRI GAGGAG 3 cut(s) 454, 531, 1867
BseSI GKGCMC 1 cut(s) 966
BseX3I CGGCCG 1 cut(s) 967
BseXI GCAGC 5 cut(s) 22, 517, 645, 1455, 1528
BseYI CCCAGC 1 cut(s) 1943
BsgI GTGCAG 3 cut(s) 652, 1080, 1764
Bsh1236I CGCG 1 cut(s) 384
Bsh1285I CGRYCG 1 cut(s) 970
BshFI GGCC 7 cut(s) 138, 155, 363, 608, 725, 969, 983
BshNI GGYRCC 1 cut(s) 2060
BsiEI CGRYCG 1 cut(s) 970
BsiHKAI GWGCWC 3 cut(s) 966, 1313, 1342
BsiHKCI CYCGRG 1 cut(s) 1033
BsiSI CCGG 6 cut(s) 139, 605, 970, 984, 1638, 1787
BslFI GGGAC 1 cut(s) 820
BslI CCNNNNNNNGG 5 cut(s) 151, 704, 1135, 1533, 1901
BsmAI GTCTC 2 cut(s) 71, 1994
BsmFI GGGAC 1 cut(s) 820
BsmI GAATGC 4 cut(s) 606, 943, 1842, 2148
BsnI GGCC 7 cut(s) 138, 155, 363, 608, 725, 969, 983
Bso31I GGTCTC 1 cut(s) 71
BsoBI CYCGRG 1 cut(s) 1033
Bsp119I TTCGAA 2 cut(s) 948, 1261
Bsp1286I GDGCHC 3 cut(s) 966, 1313, 1342
Bsp143I GATC 3 cut(s) 1729, 1885, 1977
BspACI CCGC 3 cut(s) 382, 419, 1750
BspANI GGCC 7 cut(s) 138, 155, 363, 608, 725, 969, 983
BspCNI CTCAG 2 cut(s) 136, 1143
BspFNI CGCG 1 cut(s) 384
BspLI GGNNCC 3 cut(s) 143, 609, 2062
BspMAI CTGCAG 1 cut(s) 153
BspMI ACCTGC 1 cut(s) 2048
BspPI GGATC 1 cut(s) 1737
BspQI GCTCTTC 1 cut(s) 950
BspT104I TTCGAA 2 cut(s) 948, 1261
BspT107I GGYRCC 1 cut(s) 2060
BspTNI GGTCTC 1 cut(s) 71
BsrDI GCAATG 2 cut(s) 476, 1212
BsrFI RCCGGY 1 cut(s) 604
BsrI ACTGG 2 cut(s) 170, 831
BssAI RCCGGY 1 cut(s) 604
BssECI CCNNGG 2 cut(s) 1086, 1348
BssMI GATC 3 cut(s) 1729, 1885, 1977
BssSI CACGAG 3 cut(s) 1578, 2007, 2045
BssT1I CCWWGG 1 cut(s) 1348
Bst2BI CACGAG 3 cut(s) 1578, 2007, 2045
Bst2UI CCWGG 2 cut(s) 360, 1175
Bst4CI ACNGT 3 cut(s) 736, 1405, 1844
Bst6I CTCTTC 2 cut(s) 47, 950
BstAPI GCANNNNNTGC 1 cut(s) 410
BstBI TTCGAA 2 cut(s) 948, 1261
BstC8I GCNNGC 8 cut(s) 153, 271, 406, 606, 1078, 1539, 1755, 2078
BstDEI CTNAG 3 cut(s) 123, 1104, 1130
BstEII GGTNACC 2 cut(s) 1124, 1859
BstENI CCTNNNNNAGG 2 cut(s) 149, 1133
BstF5I GGATG 4 cut(s) 572, 1192, 1700, 1724
BstFNI CGCG 1 cut(s) 384
BstH2I RGCGCY 2 cut(s) 697, 1155
BstHHI GCGC 3 cut(s) 696, 943, 1154
BstKTI GATC 3 cut(s) 1732, 1888, 1980
BstMAI GTCTC 2 cut(s) 71, 1994
BstMBI GATC 3 cut(s) 1729, 1885, 1977
BstMCI CGRYCG 1 cut(s) 970
BstMWI GCNNNNNNNGC 5 cut(s) 410, 536, 989, 1211, 1792
BstNI CCWGG 2 cut(s) 360, 1175
BstNSI RCATGY 5 cut(s) 408, 927, 1030, 1367, 1429
BstPI GGTNACC 2 cut(s) 1124, 1859
BstSCI CCNGG 3 cut(s) 358, 1173, 1637
BstSFI CTRYAG 2 cut(s) 149, 859
BstSLI GKGCMC 1 cut(s) 966
BstUI CGCG 1 cut(s) 384
BstV1I GCAGC 5 cut(s) 22, 517, 645, 1455, 1528
BstX2I RGATCY 1 cut(s) 1729
BstYI RGATCY 1 cut(s) 1729
BstZI CGGCCG 1 cut(s) 967
BsuI GTATCC 2 cut(s) 1353, 1649
BsuRI GGCC 7 cut(s) 138, 155, 363, 608, 725, 969, 983
BtrI CACGTC 1 cut(s) 1849
BtsCI GGATG 4 cut(s) 572, 1192, 1700, 1724
BtsIMutI CAGTG 5 cut(s) 741, 848, 1016, 1401, 1849
BveI ACCTGC 1 cut(s) 2048
Cac8I GCNNGC 8 cut(s) 153, 271, 406, 606, 1078, 1539, 1755, 2078
CaiI CAGNNNCTG 1 cut(s) 27
CfoI GCGC 3 cut(s) 696, 943, 1154
Cfr10I RCCGGY 1 cut(s) 604
Cfr13I GGNCC 2 cut(s) 221, 607
CsiI ACCWGGT 1 cut(s) 1173
Csp6I GTAC 5 cut(s) 1030, 1219, 1410, 1663, 2061
CviQI GTAC 5 cut(s) 1030, 1219, 1410, 1663, 2061
DdeI CTNAG 3 cut(s) 123, 1104, 1130
DpnI GATC 3 cut(s) 1731, 1887, 1979
DpnII GATC 3 cut(s) 1729, 1885, 1977
DraI TTTAAA 1 cut(s) 885
EaeI YGGCCR 2 cut(s) 136, 967
EagI CGGCCG 1 cut(s) 967
Eam1104I CTCTTC 2 cut(s) 47, 950
EarI CTCTTC 2 cut(s) 47, 950
Ecl136II GAGCTC 1 cut(s) 1311
EclXI CGGCCG 1 cut(s) 967
Eco130I CCWWGG 1 cut(s) 1348
Eco147I AGGCCT 1 cut(s) 725
Eco24I GRGCYC 1 cut(s) 1313
Eco31I GGTCTC 1 cut(s) 71
Eco47I GGWCC 1 cut(s) 221
Eco47III AGCGCT 1 cut(s) 1153
Eco52I CGGCCG 1 cut(s) 967
Eco53kI GAGCTC 1 cut(s) 1311
Eco57I CTGAAG 3 cut(s) 4, 704, 872
Eco88I CYCGRG 1 cut(s) 1033
Eco91I GGTNACC 2 cut(s) 1124, 1859
EcoICRI GAGCTC 1 cut(s) 1311
EcoNI CCTNNNNNAGG 2 cut(s) 149, 1133
EcoO65I GGTNACC 2 cut(s) 1124, 1859
EcoRI GAATTC 2 cut(s) 588, 1584
EcoRII CCWGG 2 cut(s) 358, 1173
EcoT14I CCWWGG 1 cut(s) 1348
EcoT22I ATGCAT 4 cut(s) 757, 1195, 1369, 1724
EcoT38I GRGCYC 1 cut(s) 1313
ErhI CCWWGG 1 cut(s) 1348
FalI AAGNNNNNCTT 2 cut(s) 1097, 1129
FaqI GGGAC 1 cut(s) 820
Fnu4HI GCNGC 7 cut(s) 36, 382, 531, 634, 1444, 1542, 1751
FokI GGATG 4 cut(s) 559, 1199, 1687, 1731
FriOI GRGCYC 1 cut(s) 1313
Fsp4HI GCNGC 7 cut(s) 36, 382, 531, 634, 1444, 1542, 1751
FspBI CTAG 7 cut(s) 593, 875, 1155, 1343, 1389, 1938, 2158
GlaI GCGC 3 cut(s) 695, 942, 1153
GluI GCNGC 7 cut(s) 36, 382, 531, 634, 1444, 1542, 1751
GsaI CCCAGC 1 cut(s) 1947
HaeII RGCGCY 2 cut(s) 697, 1155
HaeIII GGCC 7 cut(s) 138, 155, 363, 608, 725, 969, 983
HapII CCGG 6 cut(s) 139, 605, 970, 984, 1638, 1787
HhaI GCGC 3 cut(s) 696, 943, 1154
Hin6I GCGC 3 cut(s) 694, 941, 1152
HinP1I GCGC 3 cut(s) 694, 941, 1152
HinfI GANTC 3 cut(s) 10, 119, 1295
HpaII CCGG 6 cut(s) 139, 605, 970, 984, 1638, 1787
HphI GGTGA 3 cut(s) 1580, 1916, 2048
Hpy166II GTNNAC 6 cut(s) 175, 445, 964, 1016, 1221, 2044
Hpy188I TCNGA 5 cut(s) 15, 106, 518, 1045, 1087
Hpy188III TCNNGA 6 cut(s) 585, 644, 681, 785, 1471, 1889
Hpy8I GTNNAC 6 cut(s) 175, 445, 964, 1016, 1221, 2044
Hpy99I CGWCG 1 cut(s) 586
HpyAV CCTTC 4 cut(s) 432, 586, 944, 1760
HpyCH4III ACNGT 3 cut(s) 736, 1405, 1844
HpyCH4IV ACGT 3 cut(s) 1491, 1848, 1898
HpyF10VI GCNNNNNNNGC 5 cut(s) 410, 536, 989, 1211, 1792
HpyF3I CTNAG 3 cut(s) 123, 1104, 1130
HpySE526I ACGT 3 cut(s) 1491, 1848, 1898
HspAI GCGC 3 cut(s) 694, 941, 1152
KpnI GGTACC 1 cut(s) 2064
KroI GCCGGC 1 cut(s) 604
KroNI GCCGGC 1 cut(s) 606
Kzo9I GATC 3 cut(s) 1729, 1885, 1977
LguI GCTCTTC 1 cut(s) 950
LmnI GCTCC 3 cut(s) 544, 1337, 1505
Lsp1109I GCAGC 5 cut(s) 22, 517, 645, 1455, 1528
LweI GCATC 4 cut(s) 1180, 1202, 1467, 1709
MabI ACCWGGT 1 cut(s) 1173
MaeI CTAG 7 cut(s) 593, 875, 1155, 1343, 1389, 1938, 2158
MaeII ACGT 3 cut(s) 1491, 1848, 1898
MaeIII GTNAC 6 cut(s) 730, 1124, 1399, 1844, 1859, 1904
MalI GATC 3 cut(s) 1731, 1887, 1979
MboI GATC 3 cut(s) 1729, 1885, 1977
MfeI CAATTG 2 cut(s) 668, 2022
MflI RGATCY 1 cut(s) 1729
MhlI GDGCHC 3 cut(s) 966, 1313, 1342
MmeI TCCRAC 1 cut(s) 541
Mph1103I ATGCAT 4 cut(s) 757, 1195, 1369, 1724
MroNI GCCGGC 1 cut(s) 604
MseI TTAA 4 cut(s) 821, 884, 978, 2112
MslI CAYNNNNRTG 2 cut(s) 1593, 1781
MspA1I CMGCKG 1 cut(s) 494
MspI CCGG 6 cut(s) 139, 605, 970, 984, 1638, 1787
MspR9I CCNGG 3 cut(s) 360, 1175, 1639
MunI CAATTG 2 cut(s) 668, 2022
Mva1269I GAATGC 4 cut(s) 606, 943, 1842, 2148
MvaI CCWGG 2 cut(s) 360, 1175
MvnI CGCG 1 cut(s) 384
MwoI GCNNNNNNNGC 5 cut(s) 410, 536, 989, 1211, 1792
NaeI GCCGGC 1 cut(s) 606
NciI CCSGG 1 cut(s) 1639
NdeII GATC 3 cut(s) 1729, 1885, 1977
NgoMIV GCCGGC 1 cut(s) 604
NlaIV GGNNCC 3 cut(s) 143, 609, 2062
NmuCI GTSAC 4 cut(s) 730, 1399, 1844, 1904
NsiI ATGCAT 4 cut(s) 757, 1195, 1369, 1724
NspI RCATGY 5 cut(s) 408, 927, 1030, 1367, 1429
NspV TTCGAA 2 cut(s) 948, 1261
PaeI GCATGC 1 cut(s) 408
PaeR7I CTCGAG 1 cut(s) 1033
PceI AGGCCT 1 cut(s) 725
PciI ACATGT 2 cut(s) 1026, 1425
PciSI GCTCTTC 1 cut(s) 950
PcsI WCGNNNNNNNCGW 1 cut(s) 381
PctI GAATGC 4 cut(s) 606, 943, 1842, 2148
PdiI GCCGGC 1 cut(s) 606
PfeI GAWTC 3 cut(s) 10, 119, 1295
PflMI CCANNNNNTGG 1 cut(s) 1901
PkrI GCNGC 7 cut(s) 37, 383, 532, 635, 1445, 1543, 1752
PscI ACATGT 2 cut(s) 1026, 1425
Psp124BI GAGCTC 1 cut(s) 1313
Psp6I CCWGG 2 cut(s) 358, 1173
PspEI GGTNACC 2 cut(s) 1124, 1859
PspFI CCCAGC 1 cut(s) 1943
PspGI CCWGG 2 cut(s) 358, 1173
PspN4I GGNNCC 3 cut(s) 143, 609, 2062
PspPI GGNCC 2 cut(s) 221, 607
PspXI VCTCGAGB 1 cut(s) 1033
PsrI GAACNNNNNNTAC 4 cut(s) 435, 467, 642, 674
PstI CTGCAG 1 cut(s) 153
PstNI CAGNNNCTG 1 cut(s) 27
PsuI RGATCY 1 cut(s) 1729
PvuII CAGCTG 1 cut(s) 494
RsaI GTAC 5 cut(s) 1031, 1220, 1411, 1664, 2062
RsaNI GTAC 5 cut(s) 1030, 1219, 1410, 1663, 2061
RseI CAYNNNNRTG 2 cut(s) 1593, 1781
SacI GAGCTC 1 cut(s) 1313
SapI GCTCTTC 1 cut(s) 950
SaqAI TTAA 4 cut(s) 821, 884, 978, 2112
SatI GCNGC 7 cut(s) 36, 382, 531, 634, 1444, 1542, 1751
Sau3AI GATC 3 cut(s) 1729, 1885, 1977
Sau96I GGNCC 2 cut(s) 221, 607
ScaI AGTACT 1 cut(s) 1664
ScrFI CCNGG 3 cut(s) 360, 1175, 1639
SduI GDGCHC 3 cut(s) 966, 1313, 1342
SexAI ACCWGGT 1 cut(s) 1173
SfaNI GCATC 4 cut(s) 1180, 1202, 1467, 1709
SfcI CTRYAG 2 cut(s) 149, 859
Sfr274I CTCGAG 1 cut(s) 1033
SfuI TTCGAA 2 cut(s) 948, 1261
SinI GGWCC 1 cut(s) 221
SlaI CTCGAG 1 cut(s) 1033
SmiMI CAYNNNNRTG 2 cut(s) 1593, 1781
SmlI CTYRAG 2 cut(s) 1033, 1278
SmoI CTYRAG 2 cut(s) 1033, 1278
SphI GCATGC 1 cut(s) 408
SseBI AGGCCT 1 cut(s) 725
SsiI CCGC 3 cut(s) 382, 419, 1750
SspMI CTAG 7 cut(s) 593, 875, 1155, 1343, 1389, 1938, 2158
SstI GAGCTC 1 cut(s) 1313
StuI AGGCCT 1 cut(s) 725
StyD4I CCNGG 3 cut(s) 358, 1173, 1637
StyI CCWWGG 1 cut(s) 1348
TaaI ACNGT 3 cut(s) 736, 1405, 1844
TaiI ACGT 3 cut(s) 1494, 1851, 1901
TaqI TCGA 5 cut(s) 584, 948, 1034, 1167, 1261
TatI WGTACW 2 cut(s) 1029, 1662
TauI GCSGC 2 cut(s) 384, 1753
TfiI GAWTC 3 cut(s) 10, 119, 1295
Tru1I TTAA 4 cut(s) 821, 884, 978, 2112
Tru9I TTAA 4 cut(s) 821, 884, 978, 2112
TscAI CASTG 5 cut(s) 741, 855, 1023, 1408, 1849
TseFI GTSAC 4 cut(s) 730, 1399, 1844, 1904
TseI GCWGC 5 cut(s) 35, 530, 633, 1443, 1541
Tsp45I GTSAC 4 cut(s) 730, 1399, 1844, 1904
TspRI CASTG 5 cut(s) 741, 855, 1023, 1408, 1849
Van91I CCANNNNNTGG 1 cut(s) 1901
VneI GTGCAC 1 cut(s) 962
VpaK11BI GGWCC 1 cut(s) 221
XagI CCTNNNNNAGG 2 cut(s) 149, 1133
XapI RAATTY 4 cut(s) 588, 1584, 2088, 2142
XceI RCATGY 5 cut(s) 408, 927, 1030, 1367, 1429
XhoI CTCGAG 1 cut(s) 1033
XspI CTAG 7 cut(s) 593, 875, 1155, 1343, 1389, 1938, 2158
ZrmI AGTACT 1 cut(s) 1664
Zsp2I ATGCAT 4 cut(s) 757, 1195, 1369, 1724
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.