Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0002488

Physical Location & Seq

Genomic Coordinates Reverse (-)

6845549 .. 6848625

Gene Structure 3077 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1080300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1959 bp

ATGGCATCGGTGCATAGTGCCCTGACATCGGTTGTGTGCAAGAATGGCAGTCATTCTTCTGCAGCAAAGTTCCCAGCTACCACCTTCTTGCCCGGGTTTGATGCCGTGGGGCGTCTTTCAAGCCCGTTCAAGAAGGAAGTGTGCCTTAGTTCCCTGAGCTCAGGTGCCAAAGCTACACTTACCTTTGATCCCCCAGCAACCAATTCCGAGAAACCCAAGCTACCAAGGCATACAGCCGATCCCGCTTCTCCTGATTTTCTGCCTCTTCCGTCCTTTGAACAATGTTTTCCCAAGAGCACAAAAGAACACAGGGAAGTTGTTCACGAAGAAACTGGCCATGTGCTCAAAGTTCCCCTTCGACGAGTCCACCTGGCTGGGGATGAACCTCCATTCGACAACTATGACACTAGTGGTCCACAAAACATAAGCCCGCGCGTTGGTCTCCCTAAACTGCGGAAAGATTGGATTGAGAGGCGAGACAAATTAGGTGCACCAAGATACACTCAGATGTACTATGCTAAGCAGGGAATTATAACTGAGGAGATGTTGTACTGTGCTGCTCGTGAGAAGCTTGACCCAGAGTTTGTGAGATCAGAAGTGGCTCGTGGGCGGGCAATTATCCCTTCCAATAAGAAGCACTTGGAGCTGGAGCCAATGATCGTTGGGAGAAAATTTCTGGTCAAGGTTAATGCAAACATAGGAAACTCTGCTGTTGTCAGCTCTATCGAAGAGGAAGTTTATAAAGTCCAGTGGGCAACTATGTGGGGTGCTGACACTGTCATGGATCTGTCTACAGGACGTCACATCCATGAGACCCGTGAGTGGATCCTACGTAACTCCCCTGTGCCAGTAGGGACAGTACCCATTTATCAAGCGCTTGAAAAAGTGGATGGAATTGCAGAAAACCTGAACTGGGAAGTGTTCAGAGAAACTCTTATTGAACAAGCCGAGCAGGGTGTAGATTACTTCACCATCCATGCCGGGGTTCTACTGCGGTACATCCCACTAACAGCAAAGCGTATGACAGGAATTGTTTCACGAGGAGGATCCATTCATGCAAAGTGGTGCTTAGCTTATCACAAAGAGAATTTTGCTTATGAGCACTGGGATGACATACTCGACATCTGCAATCAATATGATGTCGCCCTGTCAATTGGTGACGGGCTGAGACCTGGTTCGATTTATGATGCTAATGACACTGCACAGTTTGCAGAGCTGTTAACTCAGGGAGAACTGACCCGTAGGGCATGGGAAAAGGATGTGCAGGTAATGAATGAAGGGCCAGGGCATGTTCCAATGCACAAGATTCCGGAAAACATGAAAAAACAGCTTGAATGGTGTAATGAAGCGCCTTTCTACACTCTTGGTCCTCTAACAACTGATATTGCTCCTGGATACGATCACATCACCTCTGCCATTGGTGCTGCCAACATTGGGGCTCTAGGCACCGCCCTTCTCTGTTACGTAACCCCGAAGGAGCATCTGGGATTGCCAAACCGAGATGATGTGAAGGCTGGAGTTATAGCATATAAGATAGCTGCTCATGCCGCTGATCTAGCCAAAGGTCACCCACATGCTCAAGCCTGGGATGATGCATTGAGCAAGGCAAGATTTGAGTTCCGGTGGATGGACCAGTTTGCCTTGTCACTAGACCCTATGACTGCCATGTCATTCCATGACGAAACCCTGCCAGCAGATGGTGCCAAGGTGGCCCATTTTTGCTCCATGTGCGGTCCAAAGTTCTGTTCAATGAAGATAACGGAGGATGTGAGGAAGTATGCTGAAGAGCATGGTTACGGGAGTGCTGAGGAAGCTGTGATCCGTGGAATGGATGCTATGAGTGCTGAGTTTCTTGCTGCCAAGAAAACTGTGAGCGGGGAACAGCATGGTGAAGTTGGAGGGGAAATTTACTTGCCAGAAAGTTATATAAAAGCTGCCGAGAGTTGCAGGATCACGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0006766 GO:0006767 GO:0006772 GO:0006790 GO:0006807 GO:0007584 GO:0008150 GO:0008152 GO:0009058 GO:0009110 GO:0009228 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009987 GO:0009991 GO:0010033 GO:0010243 GO:0010266 GO:0014070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017144 GO:0018130 GO:0019144 GO:0019438 GO:0019904 GO:0031667 GO:0033273 GO:0034641 GO:0042221 GO:0042364 GO:0042493 GO:0042723 GO:0042724 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044271 GO:0044272 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048037 GO:0050896 GO:0051536 GO:0051540 GO:0071704 GO:0072527 GO:0072528 GO:0080041 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901698

KEGG Pathways

Metabolic & Signaling

ko00730 ko01100 map00730 map01100

Pfam Domains

Protein Families

ThiC-associated ThiC_Rad_SAM

Protein Analysis

653

Amino Acids

72.25

Weight (kDa)

5.99

Isoelectric Point (pI)

41.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ThiC_Rad_SAM	PF01964	168 - 588	1.4e-184	Radical SAM ThiC family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002488)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G29630 AT2G29630 AT2G29630 AT2G29630
fragaria_vesca	FvH4_3g38200 FvH4_3g38200 FvH4_3g38200 FvH4_3g38200
malus_domestica	MD03G1074000.v1.1 MD11G1080300.v1.1
prunus_persica	Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1
pyrus_communis	pycom03g05980 pycom11g06760
rosa_chinensis	RchiOBHm_Chr5g0068641 RchiOBHm_Chr5g0068681
rosa_laevigata	RLG00000035986 RLG00000035996
rosa_multiflora	Rmu_sc0000376.1_g000006
rosa_roxburghii	Rroxscaffold_1G00012160 Rroxscaffold_1G00012240
rosa_rugosa	Rorug05G0392100 Rorug05G0392200 Rorug05G0392200 Rorug05G0392200 Rorug05G0392200 Rorug05G0392200
rosa_samantha	Rh5AG449800 Rh5BG468000 Rh5CG489900 Rh5DG481300
rosa_wichuraiana	Rw5G041990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	533, 741
AasI	GACNNNNNNGTC	1 cut(s)	1666
AatII	GACGTC	1 cut(s)	802
Acc36I	ACCTGC	1 cut(s)	1255
AccB1I	GGYRCC	3 cut(s)	164, 1445, 1700
AccB7I	CCANNNNNTGG	1 cut(s)	1697
AccBSI	CCGCTC	1 cut(s)	1875
AccI	GTMKAC	1 cut(s)	791
AccII	CGCG	2 cut(s)	433, 435
AccIII	TCCGGA	1 cut(s)	1309
AciI	CCGC	9 cut(s)	243, 431, 454, 610, 994, 1449, 1548, 1731, 1875
AclWI	GGATC	9 cut(s)	182, 233, 792, 820, 833, 1041, 1054, 1813, 1958
AcoI	YGGCCR	1 cut(s)	334
AcsI	RAATTY	3 cut(s)	671, 1087, 1905
AcuI	CTGAAG	1 cut(s)	1803
AcvI	CACGTG	1 cut(s)	1956
AcyI	GRCGYC	2 cut(s)	112, 799
AfaI	GTAC	4 cut(s)	512, 551, 861, 998
AfeI	AGCGCT	1 cut(s)	876
AgsI	TTSAA	7 cut(s)	120, 130, 278, 881, 941, 1334, 1749
AhlI	ACTAGT	1 cut(s)	407
AjnI	CCWGG	5 cut(s)	369, 1171, 1282, 1390, 1583
AjuI	GAANNNNNNNTTGG	2 cut(s)	1729, 1761
Alw21I	GWGCWC	5 cut(s)	161, 299, 345, 493, 1104
Alw26I	GTCTC	4 cut(s)	446, 471, 806, 1162
Alw44I	GTGCAC	1 cut(s)	489
AlwI	GGATC	9 cut(s)	182, 233, 792, 820, 833, 1041, 1054, 1813, 1958
Ama87I	CYCGRG	1 cut(s)	92
Aor13HI	TCCGGA	1 cut(s)	1309
Aor51HI	AGCGCT	1 cut(s)	876
AoxI	GGCC	3 cut(s)	334, 1280, 1710
ApaLI	GTGCAC	1 cut(s)	489
ApeKI	GCWGC	6 cut(s)	62, 557, 1424, 1538, 1856, 1934
ApoI	RAATTY	3 cut(s)	671, 1087, 1905
ArsI	GACNNNNNNTTYG	2 cut(s)	566, 598
Asp700I	GAANNNNTTC	2 cut(s)	318, 1033
AspLEI	GCGC	3 cut(s)	435, 877, 1351
AspS9I	GGNCC	6 cut(s)	413, 1280, 1367, 1630, 1711, 1733
AsuC2I	CCSGG	3 cut(s)	93, 94, 982
AsuHPI	GGTGA	5 cut(s)	961, 1169, 1399, 1559, 1901
AvaI	CYCGRG	1 cut(s)	92
AvaII	GGWCC	4 cut(s)	413, 1367, 1630, 1733
BaeGI	GKGCMC	2 cut(s)	22, 493
BalI	TGGCCA	1 cut(s)	336
BamHI	GGATCC	2 cut(s)	825, 1046
BanI	GGYRCC	3 cut(s)	164, 1445, 1700
BanII	GRGCYC	2 cut(s)	161, 1441
BauI	CACGAG	3 cut(s)	561, 603, 1038
BbrPI	CACGTG	1 cut(s)	1956
Bbv12I	GWGCWC	5 cut(s)	161, 299, 345, 493, 1104
BbvCI	CCTCAGC	1 cut(s)	1806
BbvI	GCAGC	6 cut(s)	74, 544, 1411, 1525, 1843, 1921
BccI	CCATC	4 cut(s)	884, 980, 1621, 1691
BceAI	ACGGC	1 cut(s)	89
BciT130I	CCWGG	5 cut(s)	371, 1173, 1284, 1392, 1585
BciVI	GTATCC	1 cut(s)	1388
BcnI	CCSGG	3 cut(s)	93, 94, 982
BcoDI	GTCTC	4 cut(s)	446, 471, 806, 1162
BcuI	ACTAGT	1 cut(s)	407
BfaI	CTAG	4 cut(s)	408, 1442, 1556, 1649
BfmI	CTRYAG	2 cut(s)	60, 792
BfoI	RGCGCY	2 cut(s)	878, 1352
BfuAI	ACCTGC	1 cut(s)	1255
BfuI	GTATCC	1 cut(s)	1388
BglI	GCCNNNNNGGC	1 cut(s)	1709
BisI	GCNGC	7 cut(s)	63, 558, 1425, 1539, 1548, 1857, 1935
BlpI	GCTNAGC	2 cut(s)	519, 1069
BlsI	GCNGC	7 cut(s)	64, 559, 1426, 1540, 1549, 1858, 1936
Bme1390I	CCNGG	8 cut(s)	93, 94, 371, 982, 1173, 1284, 1392, 1585
Bme18I	GGWCC	4 cut(s)	413, 1367, 1630, 1733
BmeT110I	CYCGRG	1 cut(s)	92
BmgT120I	GGNCC	6 cut(s)	413, 1280, 1367, 1630, 1711, 1733
BmiI	GGNNCC	6 cut(s)	166, 651, 827, 1048, 1447, 1702
BmrFI	CCNGG	8 cut(s)	93, 94, 371, 982, 1173, 1284, 1392, 1585
BmrI	ACTGGG	2 cut(s)	922, 1114
BmsI	GCATC	6 cut(s)	14, 91, 1177, 1489, 1582, 1822
BmuI	ACTGGG	2 cut(s)	922, 1114
BpmI	CTGGAG	2 cut(s)	668, 1536
Bpu10I	CCTNAGC	3 cut(s)	155, 160, 1806
Bpu1102I	GCTNAGC	2 cut(s)	519, 1069
BpuEI	CTTGAG	1 cut(s)	1563
BpuMI	CCSGG	3 cut(s)	93, 94, 982
BsaAI	YACGTR	3 cut(s)	833, 1465, 1956
BsaHI	GRCGYC	2 cut(s)	112, 799
BsaI	GGTCTC	3 cut(s)	446, 806, 1162
BsaJI	CCNNGG	8 cut(s)	92, 105, 224, 981, 1283, 1584, 1704, 1822
BsaWI	WCCGGW	2 cut(s)	1309, 1620
BsaXI	ACNNNNNCTCC	2 cut(s)	533, 563
Bse1I	ACTGG	6 cut(s)	337, 748, 848, 917, 1109, 1633
BseAI	TCCGGA	1 cut(s)	1309
BseBI	CCWGG	5 cut(s)	371, 1173, 1284, 1392, 1585
BseDI	CCNNGG	8 cut(s)	92, 105, 224, 981, 1283, 1584, 1704, 1822
BseMII	CTCAG	8 cut(s)	146, 174, 518, 528, 1157, 1238, 1797, 1836
BseNI	ACTGG	6 cut(s)	337, 748, 848, 917, 1109, 1633
BseRI	GAGGAG	2 cut(s)	554, 1056
BseSI	GKGCMC	2 cut(s)	22, 493
BseXI	GCAGC	6 cut(s)	74, 544, 1411, 1525, 1843, 1921
BseYI	CCCAGC	3 cut(s)	73, 193, 374
BsgI	GTGCAG	2 cut(s)	1185, 1283
Bsh1236I	CGCG	2 cut(s)	433, 435
BshFI	GGCC	3 cut(s)	336, 1282, 1712
BshNI	GGYRCC	3 cut(s)	164, 1445, 1700
BsiHKAI	GWGCWC	5 cut(s)	161, 299, 345, 493, 1104
BsiHKCI	CYCGRG	1 cut(s)	92
BsiSI	CCGG	4 cut(s)	93, 981, 1310, 1621
BslFI	GGGAC	1 cut(s)	868
BsmAI	GTCTC	4 cut(s)	446, 471, 806, 1162
BsmFI	GGGAC	1 cut(s)	868
BsnI	GGCC	3 cut(s)	336, 1282, 1712
Bso31I	GGTCTC	3 cut(s)	446, 806, 1162
BsoBI	CYCGRG	1 cut(s)	92
Bsp1286I	GDGCHC	7 cut(s)	22, 161, 299, 345, 493, 1104, 1441
Bsp13I	TCCGGA	1 cut(s)	1309
Bsp1720I	GCTNAGC	2 cut(s)	519, 1069
BspACI	CCGC	9 cut(s)	243, 431, 454, 610, 994, 1449, 1548, 1731, 1875
BspANI	GGCC	3 cut(s)	336, 1282, 1712
BspCNI	CTCAG	8 cut(s)	147, 173, 517, 529, 1158, 1237, 1798, 1837
BspEI	TCCGGA	1 cut(s)	1309
BspFNI	CGCG	2 cut(s)	433, 435
BspLI	GGNNCC	6 cut(s)	166, 651, 827, 1048, 1447, 1702
BspMAI	CTGCAG	1 cut(s)	64
BspMI	ACCTGC	1 cut(s)	1255
BspPI	GGATC	9 cut(s)	182, 233, 792, 820, 833, 1041, 1054, 1813, 1958
BspQI	GCTCTTC	1 cut(s)	1779
BspT107I	GGYRCC	3 cut(s)	164, 1445, 1700
BspTNI	GGTCTC	3 cut(s)	446, 806, 1162
BsrBI	CCGCTC	1 cut(s)	1875
BsrI	ACTGG	6 cut(s)	337, 748, 848, 917, 1109, 1633
BssECI	CCNNGG	8 cut(s)	92, 105, 224, 981, 1283, 1584, 1704, 1822
BssNI	GRCGYC	2 cut(s)	112, 799
BssSI	CACGAG	3 cut(s)	561, 603, 1038
BssT1I	CCWWGG	2 cut(s)	224, 1704
Bst2BI	CACGAG	3 cut(s)	561, 603, 1038
Bst2UI	CCWGG	5 cut(s)	371, 1173, 1284, 1392, 1585
Bst4CI	ACNGT	5 cut(s)	554, 778, 859, 1206, 1870
Bst6I	CTCTTC	3 cut(s)	270, 723, 1779
BstACI	GRCGYC	2 cut(s)	112, 799
BstAPI	GCANNNNNTGC	2 cut(s)	1208, 1700
BstBAI	YACGTR	3 cut(s)	833, 1465, 1956
BstC8I	GCNNGC	3 cut(s)	431, 612, 1692
BstDSI	CCRYGG	2 cut(s)	105, 1822
BstEII	GGTNACC	1 cut(s)	1565
BstFNI	CGCG	2 cut(s)	433, 435
BstH2I	RGCGCY	2 cut(s)	878, 1352
BstHHI	GCGC	3 cut(s)	435, 877, 1351
BstMAI	GTCTC	4 cut(s)	446, 471, 806, 1162
BstNI	CCWGG	5 cut(s)	371, 1173, 1284, 1392, 1585
BstNSI	RCATGY	2 cut(s)	1292, 1577
BstPI	GGTNACC	1 cut(s)	1565
BstSCI	CCNGG	8 cut(s)	91, 92, 369, 980, 1171, 1282, 1390, 1583
BstSFI	CTRYAG	2 cut(s)	60, 792
BstSLI	GKGCMC	2 cut(s)	22, 493
BstSNI	TACGTA	2 cut(s)	833, 1465
BstUI	CGCG	2 cut(s)	433, 435
BstV1I	GCAGC	6 cut(s)	74, 544, 1411, 1525, 1843, 1921
BstX2I	RGATCY	3 cut(s)	784, 825, 1046
BstXI	CCANNNNNNTGG	1 cut(s)	374
BstYI	RGATCY	3 cut(s)	784, 825, 1046
BsuI	GTATCC	1 cut(s)	1388
BsuRI	GGCC	3 cut(s)	336, 1282, 1712
BtgI	CCRYGG	2 cut(s)	105, 1822
BtsI	GCAGTG	1 cut(s)	1197
BtsIMutI	CAGTG	4 cut(s)	755, 774, 1102, 1197
BveI	ACCTGC	1 cut(s)	1255
Cac8I	GCNNGC	3 cut(s)	431, 612, 1692
CfoI	GCGC	3 cut(s)	435, 877, 1351
Cfr13I	GGNCC	6 cut(s)	413, 1280, 1367, 1630, 1711, 1733
Cfr9I	CCCGGG	1 cut(s)	92
CseI	GACGC	1 cut(s)	101
CsiI	ACCWGGT	1 cut(s)	1171
Csp6I	GTAC	4 cut(s)	511, 550, 860, 997
CviQI	GTAC	4 cut(s)	511, 550, 860, 997
DrdI	GACNNNNNNGTC	1 cut(s)	1666
DseDI	GACNNNNNNGTC	1 cut(s)	1666
EaeI	YGGCCR	1 cut(s)	334
Eam1104I	CTCTTC	3 cut(s)	270, 723, 1779
EarI	CTCTTC	3 cut(s)	270, 723, 1779
Ecl136II	GAGCTC	1 cut(s)	159
Eco105I	TACGTA	2 cut(s)	833, 1465
Eco130I	CCWWGG	2 cut(s)	224, 1704
Eco24I	GRGCYC	2 cut(s)	161, 1441
Eco31I	GGTCTC	3 cut(s)	446, 806, 1162
Eco47I	GGWCC	4 cut(s)	413, 1367, 1630, 1733
Eco47III	AGCGCT	1 cut(s)	876
Eco53kI	GAGCTC	1 cut(s)	159
Eco57I	CTGAAG	1 cut(s)	1803
Eco72I	CACGTG	1 cut(s)	1956
Eco88I	CYCGRG	1 cut(s)	92
Eco91I	GGTNACC	1 cut(s)	1565
EcoICRI	GAGCTC	1 cut(s)	159
EcoO65I	GGTNACC	1 cut(s)	1565
EcoRII	CCWGG	5 cut(s)	369, 1171, 1282, 1390, 1583
EcoT14I	CCWWGG	2 cut(s)	224, 1704
EcoT22I	ATGCAT	1 cut(s)	1597
EcoT38I	GRGCYC	2 cut(s)	161, 1441
ErhI	CCWWGG	2 cut(s)	224, 1704
FaqI	GGGAC	1 cut(s)	868
FauI	CCCGC	4 cut(s)	250, 438, 603, 1868
FblI	GTMKAC	1 cut(s)	791
Fnu4HI	GCNGC	7 cut(s)	63, 558, 1425, 1539, 1548, 1857, 1935
FriOI	GRGCYC	2 cut(s)	161, 1441
Fsp4HI	GCNGC	7 cut(s)	63, 558, 1425, 1539, 1548, 1857, 1935
FspBI	CTAG	4 cut(s)	408, 1442, 1556, 1649
GlaI	GCGC	3 cut(s)	434, 876, 1350
GluI	GCNGC	7 cut(s)	63, 558, 1425, 1539, 1548, 1857, 1935
GsaI	CCCAGC	3 cut(s)	77, 197, 378
GsuI	CTGGAG	2 cut(s)	668, 1536
HaeII	RGCGCY	2 cut(s)	878, 1352
HaeIII	GGCC	3 cut(s)	336, 1282, 1712
HapII	CCGG	4 cut(s)	93, 981, 1310, 1621
HgaI	GACGC	1 cut(s)	101
HhaI	GCGC	3 cut(s)	435, 877, 1351
Hin1I	GRCGYC	2 cut(s)	112, 799
Hin6I	GCGC	3 cut(s)	433, 875, 1349
HinP1I	GCGC	3 cut(s)	433, 875, 1349
HincII	GTYRAC	1 cut(s)	1221
HindII	GTYRAC	1 cut(s)	1221
HindIII	AAGCTT	1 cut(s)	569
HinfI	GANTC	2 cut(s)	363, 1306
HpaI	GTTAAC	1 cut(s)	1221
HpaII	CCGG	4 cut(s)	93, 981, 1310, 1621
HphI	GGTGA	5 cut(s)	961, 1169, 1399, 1559, 1901
Hpy166II	GTNNAC	6 cut(s)	322, 367, 416, 491, 792, 1221
Hpy188I	TCNGA	4 cut(s)	208, 507, 595, 926
Hpy188III	TCNNGA	6 cut(s)	130, 251, 323, 563, 1038, 1310
Hpy8I	GTNNAC	6 cut(s)	322, 367, 416, 491, 792, 1221
Hpy99I	CGWCG	1 cut(s)	363
HpyAV	CCTTC	8 cut(s)	94, 127, 365, 633, 1271, 1463, 1468, 1504
HpyCH4III	ACNGT	5 cut(s)	554, 778, 859, 1206, 1870
HpyCH4IV	ACGT	4 cut(s)	799, 832, 1464, 1955
HpySE526I	ACGT	4 cut(s)	799, 832, 1464, 1955
Hsp92I	GRCGYC	2 cut(s)	112, 799
HspAI	GCGC	3 cut(s)	433, 875, 1349
Kpn2I	TCCGGA	1 cut(s)	1309
KspAI	GTTAAC	1 cut(s)	1221
LguI	GCTCTTC	1 cut(s)	1779
LmnI	GCTCC	5 cut(s)	643, 649, 1393, 1477, 1727
Lsp1109I	GCAGC	6 cut(s)	74, 544, 1411, 1525, 1843, 1921
LweI	GCATC	6 cut(s)	14, 91, 1177, 1489, 1582, 1822
MabI	ACCWGGT	1 cut(s)	1171
MaeI	CTAG	4 cut(s)	408, 1442, 1556, 1649
MaeII	ACGT	4 cut(s)	799, 832, 1464, 1955
MaeIII	GTNAC	8 cut(s)	800, 833, 1157, 1460, 1465, 1565, 1644, 1793
MbiI	CCGCTC	1 cut(s)	1875
MboII	GAAGA	6 cut(s)	48, 257, 338, 740, 1765, 1796
MfeI	CAATTG	1 cut(s)	1152
MflI	RGATCY	3 cut(s)	784, 825, 1046
MhlI	GDGCHC	7 cut(s)	22, 161, 299, 345, 493, 1104, 1441
MlsI	TGGCCA	1 cut(s)	336
MluNI	TGGCCA	1 cut(s)	336
MlyI	GAGTC	1 cut(s)	372
MmeI	TCCRAC	1 cut(s)	1876
Mox20I	TGGCCA	1 cut(s)	336
Mph1103I	ATGCAT	1 cut(s)	1597
MroI	TCCGGA	1 cut(s)	1309
MroXI	GAANNNNTTC	2 cut(s)	318, 1033
MscI	TGGCCA	1 cut(s)	336
MseI	TTAA	2 cut(s)	687, 1220
MslI	CAYNNNNRTG	5 cut(s)	506, 779, 807, 1107, 1572
Msp20I	TGGCCA	1 cut(s)	336
MspA1I	CMGCKG	1 cut(s)	1550
MspI	CCGG	4 cut(s)	93, 981, 1310, 1621
MspR9I	CCNGG	8 cut(s)	93, 94, 371, 982, 1173, 1284, 1392, 1585
MunI	CAATTG	1 cut(s)	1152
MvaI	CCWGG	5 cut(s)	371, 1173, 1284, 1392, 1585
MvnI	CGCG	2 cut(s)	433, 435
NciI	CCSGG	3 cut(s)	93, 94, 982
NlaIV	GGNNCC	6 cut(s)	166, 651, 827, 1048, 1447, 1702
NmeAIII	GCCGAG	1 cut(s)	973
NmuCI	GTSAC	4 cut(s)	800, 1157, 1565, 1644
NsiI	ATGCAT	1 cut(s)	1597
NspI	RCATGY	2 cut(s)	1292, 1577
PciSI	GCTCTTC	1 cut(s)	1779
PdmI	GAANNNNTTC	2 cut(s)	318, 1033
PfeI	GAWTC	1 cut(s)	1306
PflFI	GACNNNGTC	1 cut(s)	776
PflMI	CCANNNNNTGG	1 cut(s)	1697
PfoI	TCCNGGA	1 cut(s)	1390
PkrI	GCNGC	7 cut(s)	64, 559, 1426, 1540, 1549, 1858, 1936
PleI	GAGTC	1 cut(s)	371
PmaCI	CACGTG	1 cut(s)	1956
PmlI	CACGTG	1 cut(s)	1956
PpsI	GAGTC	1 cut(s)	371
Ppu21I	YACGTR	3 cut(s)	833, 1465, 1956
PsiI	TTATAA	2 cut(s)	533, 741
Psp124BI	GAGCTC	1 cut(s)	161
Psp6I	CCWGG	5 cut(s)	369, 1171, 1282, 1390, 1583
PspCI	CACGTG	1 cut(s)	1956
PspEI	GGTNACC	1 cut(s)	1565
PspFI	CCCAGC	3 cut(s)	73, 193, 374
PspGI	CCWGG	5 cut(s)	369, 1171, 1282, 1390, 1583
PspN4I	GGNNCC	6 cut(s)	166, 651, 827, 1048, 1447, 1702
PspPI	GGNCC	6 cut(s)	413, 1280, 1367, 1630, 1711, 1733
PstI	CTGCAG	1 cut(s)	64
PsuI	RGATCY	3 cut(s)	784, 825, 1046
PsyI	GACNNNGTC	1 cut(s)	776
RsaI	GTAC	4 cut(s)	512, 551, 861, 998
RsaNI	GTAC	4 cut(s)	511, 550, 860, 997
RseI	CAYNNNNRTG	5 cut(s)	506, 779, 807, 1107, 1572
SacI	GAGCTC	1 cut(s)	161
SapI	GCTCTTC	1 cut(s)	1779
SaqAI	TTAA	2 cut(s)	687, 1220
SatI	GCNGC	7 cut(s)	63, 558, 1425, 1539, 1548, 1857, 1935
Sau96I	GGNCC	6 cut(s)	413, 1280, 1367, 1630, 1711, 1733
SchI	GAGTC	1 cut(s)	372
ScrFI	CCNGG	8 cut(s)	93, 94, 371, 982, 1173, 1284, 1392, 1585
SduI	GDGCHC	7 cut(s)	22, 161, 299, 345, 493, 1104, 1441
SexAI	ACCWGGT	1 cut(s)	1171
SfaNI	GCATC	6 cut(s)	14, 91, 1177, 1489, 1582, 1822
SfcI	CTRYAG	2 cut(s)	60, 792
SinI	GGWCC	4 cut(s)	413, 1367, 1630, 1733
SmaI	CCCGGG	1 cut(s)	94
SmiMI	CAYNNNNRTG	5 cut(s)	506, 779, 807, 1107, 1572
SmlI	CTYRAG	1 cut(s)	1578
SmoI	CTYRAG	1 cut(s)	1578
SnaBI	TACGTA	2 cut(s)	833, 1465
SpeI	ACTAGT	1 cut(s)	407
SsiI	CCGC	9 cut(s)	243, 431, 454, 610, 994, 1449, 1548, 1731, 1875
SspMI	CTAG	4 cut(s)	408, 1442, 1556, 1649
SstI	GAGCTC	1 cut(s)	161
StyD4I	CCNGG	8 cut(s)	91, 92, 369, 980, 1171, 1282, 1390, 1583
StyI	CCWWGG	2 cut(s)	224, 1704
TaaI	ACNGT	5 cut(s)	554, 778, 859, 1206, 1870
TaiI	ACGT	4 cut(s)	802, 835, 1467, 1958
TaqI	TCGA	5 cut(s)	358, 393, 726, 1119, 1178
TatI	WGTACW	2 cut(s)	510, 549
TauI	GCSGC	1 cut(s)	1550
TfiI	GAWTC	1 cut(s)	1306
Tru1I	TTAA	2 cut(s)	687, 1220
Tru9I	TTAA	2 cut(s)	687, 1220
TscAI	CASTG	4 cut(s)	755, 781, 1109, 1204
TseFI	GTSAC	4 cut(s)	800, 1157, 1565, 1644
TseI	GCWGC	6 cut(s)	62, 557, 1424, 1538, 1856, 1934
Tsp45I	GTSAC	4 cut(s)	800, 1157, 1565, 1644
TspDTI	ATGAA	7 cut(s)	396, 1043, 1286, 1290, 1334, 1359, 1766
TspGWI	ACGGA	3 cut(s)	258, 1775, 1811
TspMI	CCCGGG	1 cut(s)	92
TspRI	CASTG	4 cut(s)	755, 781, 1109, 1204
Tth111I	GACNNNGTC	1 cut(s)	776
Van91I	CCANNNNNTGG	1 cut(s)	1697
VneI	GTGCAC	1 cut(s)	489
VpaK11BI	GGWCC	4 cut(s)	413, 1367, 1630, 1733
XapI	RAATTY	3 cut(s)	671, 1087, 1905
XceI	RCATGY	2 cut(s)	1292, 1577
XmaI	CCCGGG	1 cut(s)	92
XmiI	GTMKAC	1 cut(s)	791
XmnI	GAANNNNTTC	2 cut(s)	318, 1033
XspI	CTAG	4 cut(s)	408, 1442, 1556, 1649
ZraI	GACGTC	1 cut(s)	800
Zsp2I	ATGCAT	1 cut(s)	1597

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.