Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0002488

Physical Location & Seq

Genomic Coordinates Forward (+)

74531198 .. 74535021

Gene Structure 3824 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000035986

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1893 bp

ATGGAAGTCACAGGACCACACAGCCCCACATTCCCAGAGATGGCATCGGTGCATAGTGCCTTGACATCAGTTGTGTGCAAGAATGGCAATCATTCTTCCCCTGCGAAGTTCCCGAGTACTCCCTTCTTGTCTGGGTTTGATGCTGCGGGGCGTCTTTCAAGCCCATTTAAGAAGGAGATATGTCTGAGTTCCATCAGCTCAGGTCCTAAGGCCACTTTAACTTTTGATCCTCCAGCAACCAATTCAGAGAAAGCCAAGTTACCCAACCTACCGAGGCATACAATCGATCCTGCTTCTCCTGATTTCCTGCCTCTTCCATCCTTCGAACAGTGTTTTCCAAAGAGCACAAAAGAACAAAGGGAGGTTATTCATGAAGAAACTGGTCATGTGCTCAAAGTTCCCTTTCGACGAGTTCACCTGTCTGGAGATGAACCAGCCTTTGATAACTATGACACCAGTGGTCCGCAAAACATTAACCCACGTGTTGGGCTCCCTCAACTAAGAAAAGATTGGGTTGACAGACGAGAGAAATTAGGTACACCGAGATATACTCAGATGTACTATGCTAAGCAGGGAATTATCACTGAGGAAATGTTGTATTGTGCCACCCGTGAGAAGCTTGATCCAGAGTTTGTGAGATCTGAAGTGGCTCGTGGGAGGGCAATTATCCCTTCCAATAAGAAGCACTTGGAGCTTGAGCCAATGATTGTTGGGAGAAAGTTTCTGGTCAAAGTTAATGCAAATATAGGAAACTCTGCTGTTGCCAGCTCTATTGAAGAGGAAGTTTATAAGGTCCAATGGGCAACTATGTGGGGTGCTGACACTGTTATGGACCTCTCTACAGGTCGCCATATTCATGAGACCCGTGAGTGGATCCTACGTAACTCTGCTGTGCCAGTAGGGACTGTACCAATCTATCAAGCACTTGAAAAGGTAGATGGAATTGCAGAAAATCTTAACTGGGAAGTTTTCAGACAAACTCTGATTGAGCAAGCTGAGCAGGGTGTAGATTATTTCACTATCCATGCTGGGGTTCTACTGCGGTACATCCCACTAACAGCAAAGCGTATGACAGGAATTGTCTCGCGAGGAGGATCCATTCATGCAAAGTGGTGCTTAGCTTATCATAAGGAGAATTTTGCTTATGAGCATTGGGATGACATACTTGACATCTGTAATCAATATGATGTGGCCCTGTCAATAGGTGATGGCTTGAGACCCGGTTCCATTTATGATGCCAATGATACTGCACAGTTTGCTGAGCTCTTAACTCAGGGAGAACTGACCCGCAGGGCATGGGAAAAGGATGTACAGGTAATGAATGAAGGACCTGGACATGTTCCAATGCACAAGATTCCTGAGAACATGGCAAAGCAGCTGGAATGGTGTAATGAAGCCCCTTTCTACACTCTCGGTCCTTTGACAACTGATATTGCTCCTGGATATGATCACATCACCTCTGCCATTGGTGCTGCAAATATTGGTGCTCTAGGCACTGCCCTTCTCTGCTATGTAACCCCTAAAGAGCATCTTGGATTGCCCAATCGGGATGATGTGAAGGCTGGAGTTATGGCATATAAGATAGCTGCTCATGCTGCTGATCTAGCCAAAGGTCATCCACATGCTCAAGAGTGGGATGACGCATTAAGCAAGGCAAGATTCGAGTTCCGGTGGATGGACCAGTTTGCTTTGTCTCTAGACCCTATGACTGCCATGTCCTTCCATGATGAAACCCTGCCTGCAGAAGGTGCCAAGGTGGCCCATTTTTGCTCAATGTGTGGGCCAAAGTTCTGTTCTATGAAAATAACAGAGGATGTTAGGAAGTATGCTGAGGAGCATGGTTATGGAACTGCCGAGGAAGCTGTGAAGCGTGGTGAAGGATCAAGTGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0006766 GO:0006767 GO:0006772 GO:0006790 GO:0006807 GO:0007584 GO:0008150 GO:0008152 GO:0009058 GO:0009110 GO:0009228 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009987 GO:0009991 GO:0010033 GO:0010243 GO:0010266 GO:0014070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017144 GO:0018130 GO:0019144 GO:0019438 GO:0019904 GO:0031667 GO:0033273 GO:0034641 GO:0042221 GO:0042364 GO:0042493 GO:0042723 GO:0042724 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044271 GO:0044272 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048037 GO:0050896 GO:0051536 GO:0051540 GO:0071704 GO:0072527 GO:0072528 GO:0080041 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901698

KEGG Pathways

Metabolic & Signaling

ko00730 ko01100 map00730 map01100

Pfam Domains

Protein Families

ThiC-associated ThiC_Rad_SAM

Protein Analysis

631

Amino Acids

70.07

Weight (kDa)

5.86

Isoelectric Point (pI)

42.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ThiC_Rad_SAM	PF01964	184 - 604	6.9e-184	Radical SAM ThiC family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002488)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G29630 AT2G29630 AT2G29630 AT2G29630
fragaria_vesca	FvH4_3g38200 FvH4_3g38200 FvH4_3g38200 FvH4_3g38200
malus_domestica	MD03G1074000.v1.1 MD11G1080300.v1.1
prunus_persica	Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1
pyrus_communis	pycom03g05980 pycom11g06760
rosa_chinensis	RchiOBHm_Chr5g0068641 RchiOBHm_Chr5g0068681
rosa_laevigata	RLG00000035986 RLG00000035996
rosa_multiflora	Rmu_sc0000376.1_g000006
rosa_roxburghii	Rroxscaffold_1G00012160 Rroxscaffold_1G00012240
rosa_rugosa	Rorug05G0392100 Rorug05G0392200 Rorug05G0392200 Rorug05G0392200 Rorug05G0392200 Rorug05G0392200
rosa_samantha	Rh5AG449800 Rh5BG468000 Rh5CG489900 Rh5DG481300
rosa_wichuraiana	Rw5G041990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	789
AasI	GACNNNNNNGTC	1 cut(s)	1714
AccB1I	GGYRCC	1 cut(s)	1748
AccB7I	CCANNNNNTGG	1 cut(s)	485
AccII	CGCG	1 cut(s)	1087
AciI	CCGC	4 cut(s)	146, 464, 1042, 1288
AclWI	GGATC	8 cut(s)	221, 281, 617, 868, 881, 1089, 1102, 1888
AcsI	RAATTY	1 cut(s)	1135
AcuI	CTGAAG	1 cut(s)	663
AcvI	CACGTG	1 cut(s)	482
AcyI	GRCGYC	1 cut(s)	151
AfaI	GTAC	6 cut(s)	118, 538, 560, 909, 1046, 1311
AfiI	CCNNNNNNNGG	6 cut(s)	40, 485, 870, 1030, 1675, 1745
AflIII	ACRYGT	2 cut(s)	481, 1336
AgsI	TTSAA	3 cut(s)	159, 776, 929
AjnI	CCWGG	2 cut(s)	1330, 1438
AjuI	GAANNNNNNNTTGG	2 cut(s)	1777, 1809
Alw21I	GWGCWC	4 cut(s)	347, 393, 1266, 1489
Alw26I	GTCTC	4 cut(s)	854, 1087, 1210, 1698
AlwI	GGATC	8 cut(s)	221, 281, 617, 868, 881, 1089, 1102, 1888
Ama87I	CYCGRG	1 cut(s)	112
AoxI	GGCC	4 cut(s)	210, 1191, 1758, 1781
ApeKI	GCWGC	5 cut(s)	143, 1375, 1472, 1586, 1595
ApoI	RAATTY	1 cut(s)	1135
AsuC2I	CCSGG	1 cut(s)	1221
AsuHPI	GGTGA	4 cut(s)	407, 1217, 1447, 1886
AsuII	TTCGAA	1 cut(s)	324
AvaI	CYCGRG	1 cut(s)	112
AvaII	GGWCC	8 cut(s)	14, 203, 461, 793, 832, 1328, 1415, 1678
AxyI	CCTNAGG	1 cut(s)	207
BamHI	GGATCC	2 cut(s)	873, 1094
BanI	GGYRCC	1 cut(s)	1748
BanII	GRGCYC	2 cut(s)	492, 1266
BauI	CACGAG	1 cut(s)	651
BbrPI	CACGTG	1 cut(s)	482
Bbv12I	GWGCWC	4 cut(s)	347, 393, 1266, 1489
BbvCI	CCTCAGC	1 cut(s)	1830
BbvI	GCAGC	5 cut(s)	130, 1387, 1459, 1573, 1582
BccI	CCATC	6 cut(s)	34, 200, 325, 932, 1202, 1669
BciT130I	CCWGG	2 cut(s)	1332, 1440
BclI	TGATCA	1 cut(s)	1447
BcnI	CCSGG	1 cut(s)	1221
BcoDI	GTCTC	4 cut(s)	854, 1087, 1210, 1698
BfaI	CTAG	3 cut(s)	1490, 1604, 1697
BfmI	CTRYAG	2 cut(s)	840, 1740
BglI	GCCNNNNNGGC	1 cut(s)	1757
BglII	AGATCT	1 cut(s)	638
BisI	GCNGC	5 cut(s)	144, 1376, 1473, 1587, 1596
BlpI	GCTNAGC	4 cut(s)	567, 996, 1117, 1260
BlsI	GCNGC	5 cut(s)	145, 1377, 1474, 1588, 1597
BmcAI	AGTACT	1 cut(s)	118
Bme1390I	CCNGG	3 cut(s)	1221, 1332, 1440
Bme18I	GGWCC	8 cut(s)	14, 203, 461, 793, 832, 1328, 1415, 1678
BmeT110I	CYCGRG	1 cut(s)	112
BmiI	GGNNCC	5 cut(s)	491, 875, 1096, 1225, 1750
BmrFI	CCNGG	3 cut(s)	1221, 1332, 1440
BmrI	ACTGGG	1 cut(s)	970
BmsI	GCATC	4 cut(s)	53, 130, 1225, 1537
BmuI	ACTGGG	1 cut(s)	970
BplI	GAGNNNNNCTC	2 cut(s)	535, 567
BpmI	CTGGAG	3 cut(s)	216, 444, 1584
Bpu10I	CCTNAGC	2 cut(s)	199, 1830
Bpu1102I	GCTNAGC	4 cut(s)	567, 996, 1117, 1260
Bpu14I	TTCGAA	1 cut(s)	324
BpuEI	CTTGAG	3 cut(s)	716, 1234, 1611
BpuMI	CCSGG	1 cut(s)	1221
Bsa29I	ATCGAT	1 cut(s)	285
BsaAI	YACGTR	2 cut(s)	482, 881
BsaHI	GRCGYC	1 cut(s)	151
BsaI	GGTCTC	2 cut(s)	854, 1210
BsaJI	CCNNGG	3 cut(s)	272, 1752, 1854
BsaWI	WCCGGW	1 cut(s)	1668
Bsc4I	CCNNNNNNNGG	6 cut(s)	40, 485, 870, 1030, 1675, 1745
Bse1I	ACTGG	5 cut(s)	385, 456, 896, 965, 1681
Bse21I	CCTNAGG	1 cut(s)	207
BseBI	CCWGG	2 cut(s)	1332, 1440
BseCI	ATCGAT	1 cut(s)	285
BseDI	CCNNGG	3 cut(s)	272, 1752, 1854
BseGI	GGATG	9 cut(s)	317, 1047, 1162, 1312, 1555, 1615, 1642, 1680, 1819
BseLI	CCNNNNNNNGG	6 cut(s)	40, 485, 870, 1030, 1675, 1745
BseMII	CTCAG	9 cut(s)	176, 213, 566, 576, 987, 1251, 1286, 1350, 1821
BseNI	ACTGG	5 cut(s)	385, 456, 896, 965, 1681
BseRI	GAGGAG	2 cut(s)	1104, 1847
BseXI	GCAGC	5 cut(s)	130, 1387, 1459, 1573, 1582
BseYI	CCCAGC	1 cut(s)	1028
BsgI	GTGCAG	1 cut(s)	1233
Bsh1236I	CGCG	1 cut(s)	1087
BshFI	GGCC	4 cut(s)	212, 1193, 1760, 1783
BshNI	GGYRCC	1 cut(s)	1748
BshVI	ATCGAT	1 cut(s)	285
BsiHKAI	GWGCWC	4 cut(s)	347, 393, 1266, 1489
BsiHKCI	CYCGRG	1 cut(s)	112
BsiSI	CCGG	2 cut(s)	1221, 1669
BslFI	GGGAC	1 cut(s)	916
BslI	CCNNNNNNNGG	6 cut(s)	40, 485, 870, 1030, 1675, 1745
BsmAI	GTCTC	4 cut(s)	854, 1087, 1210, 1698
BsmFI	GGGAC	1 cut(s)	916
BsnI	GGCC	4 cut(s)	212, 1193, 1760, 1783
Bso31I	GGTCTC	2 cut(s)	854, 1210
BsoBI	CYCGRG	1 cut(s)	112
Bsp119I	TTCGAA	1 cut(s)	324
Bsp1286I	GDGCHC	5 cut(s)	347, 393, 492, 1266, 1489
Bsp1407I	TGTACA	1 cut(s)	1309
Bsp143I	GATC	9 cut(s)	226, 286, 622, 638, 873, 1094, 1447, 1600, 1880
Bsp1720I	GCTNAGC	4 cut(s)	567, 996, 1117, 1260
Bsp68I	TCGCGA	1 cut(s)	1087
BspACI	CCGC	4 cut(s)	146, 464, 1042, 1288
BspANI	GGCC	4 cut(s)	212, 1193, 1760, 1783
BspCNI	CTCAG	9 cut(s)	177, 212, 565, 577, 988, 1252, 1285, 1351, 1822
BspDI	ATCGAT	1 cut(s)	285
BspFNI	CGCG	1 cut(s)	1087
BspHI	TCATGA	2 cut(s)	370, 856
BspLI	GGNNCC	5 cut(s)	491, 875, 1096, 1225, 1750
BspMAI	CTGCAG	1 cut(s)	1744
BspPI	GGATC	8 cut(s)	221, 281, 617, 868, 881, 1089, 1102, 1888
BspT104I	TTCGAA	1 cut(s)	324
BspT107I	GGYRCC	1 cut(s)	1748
BspTNI	GGTCTC	2 cut(s)	854, 1210
BsrGI	TGTACA	1 cut(s)	1309
BsrI	ACTGG	5 cut(s)	385, 456, 896, 965, 1681
BssECI	CCNNGG	3 cut(s)	272, 1752, 1854
BssMI	GATC	9 cut(s)	226, 286, 622, 638, 873, 1094, 1447, 1600, 1880
BssNI	GRCGYC	1 cut(s)	151
BssSI	CACGAG	1 cut(s)	651
BssT1I	CCWWGG	1 cut(s)	1752
Bst2BI	CACGAG	1 cut(s)	651
Bst2UI	CCWGG	2 cut(s)	1332, 1440
Bst4CI	ACNGT	4 cut(s)	330, 826, 907, 1254
Bst6I	CTCTTC	2 cut(s)	318, 771
BstACI	GRCGYC	1 cut(s)	151
BstAPI	GCANNNNNTGC	2 cut(s)	1256, 1748
BstAUI	TGTACA	1 cut(s)	1309
BstBAI	YACGTR	2 cut(s)	482, 881
BstBI	TTCGAA	1 cut(s)	324
BstC8I	GCNNGC	3 cut(s)	766, 993, 1740
BstENI	CCTNNNNNAGG	1 cut(s)	1743
BstF5I	GGATG	9 cut(s)	317, 1047, 1162, 1312, 1555, 1615, 1642, 1680, 1819
BstFNI	CGCG	1 cut(s)	1087
BstKTI	GATC	9 cut(s)	229, 289, 625, 641, 876, 1097, 1450, 1603, 1883
BstMAI	GTCTC	4 cut(s)	854, 1087, 1210, 1698
BstMBI	GATC	9 cut(s)	226, 286, 622, 638, 873, 1094, 1447, 1600, 1880
BstNI	CCWGG	2 cut(s)	1332, 1440
BstNSI	RCATGY	2 cut(s)	1340, 1625
BstSCI	CCNGG	3 cut(s)	1219, 1330, 1438
BstSFI	CTRYAG	2 cut(s)	840, 1740
BstSNI	TACGTA	1 cut(s)	881
BstUI	CGCG	1 cut(s)	1087
BstV1I	GCAGC	5 cut(s)	130, 1387, 1459, 1573, 1582
BstX2I	RGATCY	3 cut(s)	638, 873, 1094
BstYI	RGATCY	3 cut(s)	638, 873, 1094
Bsu15I	ATCGAT	1 cut(s)	285
Bsu36I	CCTNAGG	1 cut(s)	207
BsuRI	GGCC	4 cut(s)	212, 1193, 1760, 1783
BsuTUI	ATCGAT	1 cut(s)	285
BtsCI	GGATG	9 cut(s)	317, 1047, 1162, 1312, 1555, 1615, 1642, 1680, 1819
BtsI	GCAGTG	1 cut(s)	1494
BtsIMutI	CAGTG	5 cut(s)	335, 463, 582, 822, 1494
BtuMI	TCGCGA	1 cut(s)	1087
Cac8I	GCNNGC	3 cut(s)	766, 993, 1740
CciI	TCATGA	2 cut(s)	370, 856
ClaI	ATCGAT	1 cut(s)	285
CseI	GACGC	2 cut(s)	140, 1649
Csp6I	GTAC	6 cut(s)	117, 537, 559, 908, 1045, 1310
CviQI	GTAC	6 cut(s)	117, 537, 559, 908, 1045, 1310
DpnI	GATC	9 cut(s)	228, 288, 624, 640, 875, 1096, 1449, 1602, 1882
DpnII	GATC	9 cut(s)	226, 286, 622, 638, 873, 1094, 1447, 1600, 1880
DrdI	GACNNNNNNGTC	1 cut(s)	1714
DseDI	GACNNNNNNGTC	1 cut(s)	1714
Eam1104I	CTCTTC	2 cut(s)	318, 771
EarI	CTCTTC	2 cut(s)	318, 771
Ecl136II	GAGCTC	1 cut(s)	1264
Eco105I	TACGTA	1 cut(s)	881
Eco130I	CCWWGG	1 cut(s)	1752
Eco24I	GRGCYC	2 cut(s)	492, 1266
Eco31I	GGTCTC	2 cut(s)	854, 1210
Eco47I	GGWCC	8 cut(s)	14, 203, 461, 793, 832, 1328, 1415, 1678
Eco53kI	GAGCTC	1 cut(s)	1264
Eco57I	CTGAAG	1 cut(s)	663
Eco72I	CACGTG	1 cut(s)	482
Eco81I	CCTNAGG	1 cut(s)	207
Eco88I	CYCGRG	1 cut(s)	112
EcoICRI	GAGCTC	1 cut(s)	1264
EcoNI	CCTNNNNNAGG	1 cut(s)	1743
EcoO109I	RGGNCCY	2 cut(s)	203, 1328
EcoRII	CCWGG	2 cut(s)	1330, 1438
EcoT14I	CCWWGG	1 cut(s)	1752
EcoT38I	GRGCYC	2 cut(s)	492, 1266
ErhI	CCWWGG	1 cut(s)	1752
FalI	AAGNNNNNCTT	6 cut(s)	671, 703, 1100, 1132, 1515, 1547
FaqI	GGGAC	1 cut(s)	916
FauI	CCCGC	2 cut(s)	139, 1295
FbaI	TGATCA	1 cut(s)	1447
Fnu4HI	GCNGC	5 cut(s)	144, 1376, 1473, 1587, 1596
FokI	GGATG	9 cut(s)	304, 1034, 1169, 1319, 1562, 1602, 1649, 1687, 1826
FriOI	GRGCYC	2 cut(s)	492, 1266
Fsp4HI	GCNGC	5 cut(s)	144, 1376, 1473, 1587, 1596
FspBI	CTAG	3 cut(s)	1490, 1604, 1697
GluI	GCNGC	5 cut(s)	144, 1376, 1473, 1587, 1596
GsaI	CCCAGC	1 cut(s)	1032
GsuI	CTGGAG	3 cut(s)	216, 444, 1584
HaeIII	GGCC	4 cut(s)	212, 1193, 1760, 1783
HapII	CCGG	2 cut(s)	1221, 1669
HgaI	GACGC	2 cut(s)	140, 1649
Hin1I	GRCGYC	1 cut(s)	151
HincII	GTYRAC	1 cut(s)	517
HindII	GTYRAC	1 cut(s)	517
HindIII	AAGCTT	1 cut(s)	617
HinfI	GANTC	2 cut(s)	1354, 1659
HpaII	CCGG	2 cut(s)	1221, 1669
HphI	GGTGA	4 cut(s)	407, 1217, 1447, 1886
Hpy166II	GTNNAC	3 cut(s)	415, 517, 539
Hpy188I	TCNGA	6 cut(s)	186, 247, 555, 643, 974, 984
Hpy8I	GTNNAC	3 cut(s)	415, 517, 539
Hpy99I	CGWCG	1 cut(s)	411
HpyCH4III	ACNGT	4 cut(s)	330, 826, 907, 1254
HpyCH4IV	ACGT	2 cut(s)	481, 880
HpyCH4V	TGCA	9 cut(s)	52, 78, 740, 947, 1106, 1250, 1348, 1475, 1742
HpySE526I	ACGT	2 cut(s)	481, 880
Hsp92I	GRCGYC	1 cut(s)	151
Ksp22I	TGATCA	1 cut(s)	1447
Kzo9I	GATC	9 cut(s)	226, 286, 622, 638, 873, 1094, 1447, 1600, 1880
LmnI	GCTCC	4 cut(s)	495, 691, 1441, 1834
Lsp1109I	GCAGC	5 cut(s)	130, 1387, 1459, 1573, 1582
LweI	GCATC	4 cut(s)	53, 130, 1225, 1537
MaeI	CTAG	3 cut(s)	1490, 1604, 1697
MaeII	ACGT	2 cut(s)	481, 880
MaeIII	GTNAC	4 cut(s)	7, 258, 881, 1513
MalI	GATC	9 cut(s)	228, 288, 624, 640, 875, 1096, 1449, 1602, 1882
MboI	GATC	9 cut(s)	226, 286, 622, 638, 873, 1094, 1447, 1600, 1880
MboII	GAAGA	4 cut(s)	87, 305, 386, 788
MflI	RGATCY	3 cut(s)	638, 873, 1094
MhlI	GDGCHC	5 cut(s)	347, 393, 492, 1266, 1489
MluCI	AATT	7 cut(s)	241, 530, 576, 663, 942, 1077, 1135
MseI	TTAA	7 cut(s)	168, 218, 474, 735, 957, 1268, 1646
MslI	CAYNNNNRTG	5 cut(s)	827, 855, 1155, 1620, 1842
MspA1I	CMGCKG	1 cut(s)	1378
MspI	CCGG	2 cut(s)	1221, 1669
MspR9I	CCNGG	3 cut(s)	1221, 1332, 1440
MvaI	CCWGG	2 cut(s)	1332, 1440
MvnI	CGCG	1 cut(s)	1087
NciI	CCSGG	1 cut(s)	1221
NdeII	GATC	9 cut(s)	226, 286, 622, 638, 873, 1094, 1447, 1600, 1880
NlaIV	GGNNCC	5 cut(s)	491, 875, 1096, 1225, 1750
NmeAIII	GCCGAG	1 cut(s)	1879
NmuCI	GTSAC	1 cut(s)	7
NruI	TCGCGA	1 cut(s)	1087
NspI	RCATGY	2 cut(s)	1340, 1625
NspV	TTCGAA	1 cut(s)	324
PagI	TCATGA	2 cut(s)	370, 856
PciI	ACATGT	1 cut(s)	1336
PfeI	GAWTC	2 cut(s)	1354, 1659
PflMI	CCANNNNNTGG	1 cut(s)	485
PfoI	TCCNGGA	1 cut(s)	1438
PkrI	GCNGC	5 cut(s)	145, 1377, 1474, 1588, 1597
PmaCI	CACGTG	1 cut(s)	482
PmlI	CACGTG	1 cut(s)	482
Ppu21I	YACGTR	2 cut(s)	482, 881
PpuMI	RGGWCCY	2 cut(s)	203, 1328
PscI	ACATGT	1 cut(s)	1336
PsiI	TTATAA	1 cut(s)	789
Psp124BI	GAGCTC	1 cut(s)	1266
Psp5II	RGGWCCY	2 cut(s)	203, 1328
Psp6I	CCWGG	2 cut(s)	1330, 1438
PspCI	CACGTG	1 cut(s)	482
PspFI	CCCAGC	1 cut(s)	1028
PspGI	CCWGG	2 cut(s)	1330, 1438
PspN4I	GGNNCC	5 cut(s)	491, 875, 1096, 1225, 1750
PspPPI	RGGWCCY	2 cut(s)	203, 1328
PstI	CTGCAG	1 cut(s)	1744
PsuI	RGATCY	3 cut(s)	638, 873, 1094
PvuII	CAGCTG	1 cut(s)	1378
RruI	TCGCGA	1 cut(s)	1087
RsaI	GTAC	6 cut(s)	118, 538, 560, 909, 1046, 1311
RsaNI	GTAC	6 cut(s)	117, 537, 559, 908, 1045, 1310
RseI	CAYNNNNRTG	5 cut(s)	827, 855, 1155, 1620, 1842
SacI	GAGCTC	1 cut(s)	1266
SaqAI	TTAA	7 cut(s)	168, 218, 474, 735, 957, 1268, 1646
SatI	GCNGC	5 cut(s)	144, 1376, 1473, 1587, 1596
Sau3AI	GATC	9 cut(s)	226, 286, 622, 638, 873, 1094, 1447, 1600, 1880
ScaI	AGTACT	1 cut(s)	118
ScrFI	CCNGG	3 cut(s)	1221, 1332, 1440
SduI	GDGCHC	5 cut(s)	347, 393, 492, 1266, 1489
SfaNI	GCATC	4 cut(s)	53, 130, 1225, 1537
SfcI	CTRYAG	2 cut(s)	840, 1740
SfuI	TTCGAA	1 cut(s)	324
SinI	GGWCC	8 cut(s)	14, 203, 461, 793, 832, 1328, 1415, 1678
SmiMI	CAYNNNNRTG	5 cut(s)	827, 855, 1155, 1620, 1842
SmlI	CTYRAG	3 cut(s)	695, 1213, 1626
SmoI	CTYRAG	3 cut(s)	695, 1213, 1626
SnaBI	TACGTA	1 cut(s)	881
Sse9I	AATT	7 cut(s)	241, 530, 576, 663, 942, 1077, 1135
SsiI	CCGC	4 cut(s)	146, 464, 1042, 1288
SspI	AATATT	1 cut(s)	1480
SspMI	CTAG	3 cut(s)	1490, 1604, 1697
SstI	GAGCTC	1 cut(s)	1266
StyD4I	CCNGG	3 cut(s)	1219, 1330, 1438
StyI	CCWWGG	1 cut(s)	1752
TaaI	ACNGT	4 cut(s)	330, 826, 907, 1254
TaiI	ACGT	2 cut(s)	484, 883
TaqI	TCGA	4 cut(s)	285, 324, 406, 1662
TaqII	GACCGA	1 cut(s)	1403
TasI	AATT	7 cut(s)	241, 530, 576, 663, 942, 1077, 1135
TatI	WGTACW	3 cut(s)	116, 558, 1309
TfiI	GAWTC	2 cut(s)	1354, 1659
Tru1I	TTAA	7 cut(s)	168, 218, 474, 735, 957, 1268, 1646
Tru9I	TTAA	7 cut(s)	168, 218, 474, 735, 957, 1268, 1646
TscAI	CASTG	5 cut(s)	335, 463, 589, 829, 1501
TseFI	GTSAC	1 cut(s)	7
TseI	GCWGC	5 cut(s)	143, 1375, 1472, 1586, 1595
Tsp45I	GTSAC	1 cut(s)	7
TspRI	CASTG	5 cut(s)	335, 463, 589, 829, 1501
Van91I	CCANNNNNTGG	1 cut(s)	485
VpaK11BI	GGWCC	8 cut(s)	14, 203, 461, 793, 832, 1328, 1415, 1678
XagI	CCTNNNNNAGG	1 cut(s)	1743
XapI	RAATTY	1 cut(s)	1135
XbaI	TCTAGA	1 cut(s)	1696
XceI	RCATGY	2 cut(s)	1340, 1625
XspI	CTAG	3 cut(s)	1490, 1604, 1697
ZrmI	AGTACT	1 cut(s)	118

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.