Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0002488

Physical Location & Seq

Genomic Coordinates Reverse (-)

15093074 .. 15097209

Gene Structure 4136 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00012240.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1956 bp

ATGGCATCGGTGCATAGTGCCTTGACATCAGTTGTGTGCAAGAATGGCAATCATTCTTCCCCTGCGAAGTTCCCGAGTACTCCCTTCTTGTCTGGGTTTGATGCTGTGGGGCGTCTTTCAAGCCCATTTAAGAAGGAGATATGTCTGAGTTCTATCAGCTCAGGTCCTAAGGCCACTTTAACTTTTGATCCTCCAGCAACCAATTCAGAGAAAGCCAAGGTACCCAACCTACCGAGGCATACAATTGATCCTGCTTCTCCTGATTTCCTGCCTCTTCCATCCTTCGAACAGTGTTTTCCAAAGAGCACAAAAGAACAAAGGGAGGTTATTCATGAAGAAACTGGTCATGTGCTCAAAGTTCCCTTTCGACGAGTTCACCTGTCTGGAGATGAACCAGCCTTTGATAACTATGACACCAGTGGTCCGCAAAACATTAACCCACGCGTTGGGCTCCCTCAACTGAGGAAAGATTGGGTTGACAGACGAGAGAAATTAGGTACACCGAGATACACTCAGATGTACTATGCTAAGCAGGGAATTATCACTGAGGAAATGTTGTATTGTGCCACCCGTGAGAAGCTTGATCCAGAGTTTGTGAGATCTGAAGTGGCTCGTGGGAGGGCAATTATCCCTTCCAATAAGAAGCACTTGGAGCTTGAGCCAATGATTGTTGGGAGAAAGTTTCTGGTCAAAGTTAATGCAAATATAGGAAACTCTGCTGTTGCCAGCTCTATCGAAGAGGAAGTTTATAAGGTCCAATGGGCAACTATGTGGGGAGCTGACACTGTTATGGACCTCTCTACAGGTCGCCATATTCATGAGACCCGTGAGTGGATCCTACGTAACTCTGCTGTGCCAGTAGGGACTGTACCAATCTATCAAGCACTTGAAAAGGTAGGTGGAATTGCAGAAAATCTTAACTGGGAAGTTTTCAGACAAACTCTGATTGAACAAGCTGAGCAGGGTGTAGATTACTTCACCATCCATGCTGGGGTTCTACTGCGGTACATCCCACTAACAGCAAAGCGTATGACAGGAATTGTCTCGCGAGGAGGATCCATTCATGCAAAGTGGTGCTTAGCTTATCATAAGGAGAATTTTGCTTATGAGCATTGGGATGACATACTTGACATCTGTAATCAATATGATGTGGCCCTGTCAATAGGTGATGGCTTGAGACCCGGTTCCATTTATGATGCCAACGATACTGCACAGTTTGCGGAGCTCTTAACTCAGGGAGAACTGACCCGCAGGGCATGGGAAAAGGATGTACAGGTAATGAATGAAGGACCTGGACATGTTCCAATGCACAAGATTCCTGAGAACATGGCAAAGCAGCTGGAATGGTGTAATGAAGCCCCTTTCTACACTCTCGGTCCTTTGACAACTGATATTGCTCCTGGATATGATCACATCACCTCTGCCATTGGTGCTGCCAATATTGGTGCTCTAGGCACTGCCCTTCTCTGCTATGTAACCCCTAAAGAGCATCTTGGATTGCCCAATCGGGATGATGTGAAGGCTGGAGTTATAGCATATAAGATAGCTGCTCATGCTGCTGATCTAGCCAAAGGTCATCCACATGCTCAAGAGTGGGATGACGCATTAAGCAAGGCAAGATTCGAGTTCCGGTGGATGGACCAGTTTGCTTTGTCTCTAGACCCTATGACTGCCATGTCCTTCCATGATGAAACCCTGCCTGCAGAAGGTGCCAAGGTGGCCCATTTTTGCTCAATGTGTGGGCCAAAGTTCTGTTCTATGAAGATAACAGAGGATGTTAGGAAGTATGCTGAGGAGCATGGTTATGGAACTGCCGAGGAAGCTGTGAAGCGTGGTATGGATGCCATGAGTGCTGAGTTTCTTGCTGCCAAGAAAACTGTCAGTGGAGAACAACATGGTGAAATTGGTGGAGAAATCTACTTGCCAGAAAGTTATGTAAAATCCTCTGAGAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0006766 GO:0006767 GO:0006772 GO:0006790 GO:0006807 GO:0007584 GO:0008150 GO:0008152 GO:0009058 GO:0009110 GO:0009228 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009987 GO:0009991 GO:0010033 GO:0010243 GO:0010266 GO:0014070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017144 GO:0018130 GO:0019144 GO:0019438 GO:0019904 GO:0031667 GO:0033273 GO:0034641 GO:0042221 GO:0042364 GO:0042493 GO:0042723 GO:0042724 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044271 GO:0044272 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048037 GO:0050896 GO:0051536 GO:0051540 GO:0071704 GO:0072527 GO:0072528 GO:0080041 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901698

KEGG Pathways

Metabolic & Signaling

ko00730 ko01100 map00730 map01100

Pfam Domains

Protein Families

ThiC-associated ThiC_Rad_SAM

Protein Analysis

651

Amino Acids

72.33

Weight (kDa)

5.97

Isoelectric Point (pI)

42.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ThiC_Rad_SAM	PF01964	171 - 591	8.5e-184	Radical SAM ThiC family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002488)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G29630 AT2G29630 AT2G29630 AT2G29630
fragaria_vesca	FvH4_3g38200 FvH4_3g38200 FvH4_3g38200 FvH4_3g38200
malus_domestica	MD03G1074000.v1.1 MD11G1080300.v1.1
prunus_persica	Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1
pyrus_communis	pycom03g05980 pycom11g06760
rosa_chinensis	RchiOBHm_Chr5g0068641 RchiOBHm_Chr5g0068681
rosa_laevigata	RLG00000035986 RLG00000035996
rosa_multiflora	Rmu_sc0000376.1_g000006
rosa_roxburghii	Rroxscaffold_1G00012160 Rroxscaffold_1G00012240
rosa_rugosa	Rorug05G0392100 Rorug05G0392200 Rorug05G0392200 Rorug05G0392200 Rorug05G0392200 Rorug05G0392200
rosa_samantha	Rh5AG449800 Rh5BG468000 Rh5CG489900 Rh5DG481300
rosa_wichuraiana	Rw5G041990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	750
AasI	GACNNNNNNGTC	1 cut(s)	1675
Acc65I	GGTACC	1 cut(s)	220
AccB1I	GGYRCC	2 cut(s)	220, 1709
AccB7I	CCANNNNNTGG	1 cut(s)	446
AccII	CGCG	2 cut(s)	444, 1048
AciI	CCGC	4 cut(s)	425, 1003, 1220, 1249
AclWI	GGATC	7 cut(s)	182, 242, 578, 829, 842, 1050, 1063
AcsI	RAATTY	1 cut(s)	1096
AcuI	CTGAAG	1 cut(s)	624
AcyI	GRCGYC	1 cut(s)	112
AfaI	GTAC	7 cut(s)	79, 222, 499, 521, 870, 1007, 1272
AfiI	CCNNNNNNNGG	6 cut(s)	446, 831, 991, 1636, 1706, 1950
AflIII	ACRYGT	2 cut(s)	442, 1297
AgsI	TTSAA	3 cut(s)	120, 890, 950
AjnI	CCWGG	2 cut(s)	1291, 1399
AjuI	GAANNNNNNNTTGG	2 cut(s)	1738, 1770
Alw21I	GWGCWC	4 cut(s)	308, 354, 1227, 1450
Alw26I	GTCTC	4 cut(s)	815, 1048, 1171, 1659
AlwI	GGATC	7 cut(s)	182, 242, 578, 829, 842, 1050, 1063
Ama87I	CYCGRG	1 cut(s)	73
AoxI	GGCC	4 cut(s)	171, 1152, 1719, 1742
ApeKI	GCWGC	5 cut(s)	1336, 1433, 1547, 1556, 1865
ApoI	RAATTY	1 cut(s)	1096
Asp718I	GGTACC	1 cut(s)	220
AsuC2I	CCSGG	1 cut(s)	1182
AsuHPI	GGTGA	5 cut(s)	368, 970, 1178, 1408, 1910
AsuII	TTCGAA	1 cut(s)	285
AvaI	CYCGRG	1 cut(s)	73
AvaII	GGWCC	7 cut(s)	164, 422, 754, 793, 1289, 1376, 1639
AxyI	CCTNAGG	1 cut(s)	168
BamHI	GGATCC	2 cut(s)	834, 1055
BanI	GGYRCC	2 cut(s)	220, 1709
BanII	GRGCYC	2 cut(s)	453, 1227
BauI	CACGAG	1 cut(s)	612
Bbv12I	GWGCWC	4 cut(s)	308, 354, 1227, 1450
BbvCI	CCTCAGC	1 cut(s)	1791
BbvI	GCAGC	5 cut(s)	1348, 1420, 1534, 1543, 1852
BccI	CCATC	4 cut(s)	286, 989, 1163, 1630
BciT130I	CCWGG	2 cut(s)	1293, 1401
BclI	TGATCA	1 cut(s)	1408
BcnI	CCSGG	1 cut(s)	1182
BcoDI	GTCTC	4 cut(s)	815, 1048, 1171, 1659
BfaI	CTAG	3 cut(s)	1451, 1565, 1658
BfmI	CTRYAG	2 cut(s)	801, 1701
BglI	GCCNNNNNGGC	1 cut(s)	1718
BglII	AGATCT	1 cut(s)	599
BisI	GCNGC	5 cut(s)	1337, 1434, 1548, 1557, 1866
BlpI	GCTNAGC	3 cut(s)	528, 957, 1078
BlsI	GCNGC	5 cut(s)	1338, 1435, 1549, 1558, 1867
BmcAI	AGTACT	1 cut(s)	79
Bme1390I	CCNGG	3 cut(s)	1182, 1293, 1401
Bme18I	GGWCC	7 cut(s)	164, 422, 754, 793, 1289, 1376, 1639
BmeT110I	CYCGRG	1 cut(s)	73
BmiI	GGNNCC	6 cut(s)	222, 452, 836, 1057, 1186, 1711
BmrFI	CCNGG	3 cut(s)	1182, 1293, 1401
BmrI	ACTGGG	1 cut(s)	931
BmsI	GCATC	5 cut(s)	14, 91, 1186, 1498, 1831
BmuI	ACTGGG	1 cut(s)	931
BplI	GAGNNNNNCTC	2 cut(s)	496, 528
BpmI	CTGGAG	3 cut(s)	177, 405, 1545
Bpu10I	CCTNAGC	2 cut(s)	160, 1791
Bpu1102I	GCTNAGC	3 cut(s)	528, 957, 1078
Bpu14I	TTCGAA	1 cut(s)	285
BpuEI	CTTGAG	3 cut(s)	677, 1195, 1572
BpuMI	CCSGG	1 cut(s)	1182
BsaAI	YACGTR	1 cut(s)	842
BsaHI	GRCGYC	1 cut(s)	112
BsaI	GGTCTC	2 cut(s)	815, 1171
BsaJI	CCNNGG	4 cut(s)	216, 233, 1713, 1815
BsaWI	WCCGGW	1 cut(s)	1629
Bsc4I	CCNNNNNNNGG	6 cut(s)	446, 831, 991, 1636, 1706, 1950
Bse1I	ACTGG	5 cut(s)	346, 417, 857, 926, 1642
Bse21I	CCTNAGG	1 cut(s)	168
BseBI	CCWGG	2 cut(s)	1293, 1401
BseDI	CCNNGG	4 cut(s)	216, 233, 1713, 1815
BseLI	CCNNNNNNNGG	6 cut(s)	446, 831, 991, 1636, 1706, 1950
BseNI	ACTGG	5 cut(s)	346, 417, 857, 926, 1642
BseRI	GAGGAG	2 cut(s)	1065, 1808
BseXI	GCAGC	5 cut(s)	1348, 1420, 1534, 1543, 1852
BseYI	CCCAGC	1 cut(s)	989
BsgI	GTGCAG	1 cut(s)	1194
Bsh1236I	CGCG	2 cut(s)	444, 1048
BshFI	GGCC	4 cut(s)	173, 1154, 1721, 1744
BshNI	GGYRCC	2 cut(s)	220, 1709
BsiHKAI	GWGCWC	4 cut(s)	308, 354, 1227, 1450
BsiHKCI	CYCGRG	1 cut(s)	73
BsiSI	CCGG	2 cut(s)	1182, 1630
BslFI	GGGAC	1 cut(s)	877
BslI	CCNNNNNNNGG	6 cut(s)	446, 831, 991, 1636, 1706, 1950
BsmAI	GTCTC	4 cut(s)	815, 1048, 1171, 1659
BsmFI	GGGAC	1 cut(s)	877
BsnI	GGCC	4 cut(s)	173, 1154, 1721, 1744
Bso31I	GGTCTC	2 cut(s)	815, 1171
BsoBI	CYCGRG	1 cut(s)	73
Bsp119I	TTCGAA	1 cut(s)	285
Bsp1286I	GDGCHC	5 cut(s)	308, 354, 453, 1227, 1450
Bsp1407I	TGTACA	1 cut(s)	1270
Bsp143I	GATC	8 cut(s)	187, 247, 583, 599, 834, 1055, 1408, 1561
Bsp1720I	GCTNAGC	3 cut(s)	528, 957, 1078
Bsp68I	TCGCGA	1 cut(s)	1048
BspACI	CCGC	4 cut(s)	425, 1003, 1220, 1249
BspANI	GGCC	4 cut(s)	173, 1154, 1721, 1744
BspFNI	CGCG	2 cut(s)	444, 1048
BspHI	TCATGA	2 cut(s)	331, 817
BspLI	GGNNCC	6 cut(s)	222, 452, 836, 1057, 1186, 1711
BspMAI	CTGCAG	1 cut(s)	1705
BspPI	GGATC	7 cut(s)	182, 242, 578, 829, 842, 1050, 1063
BspT104I	TTCGAA	1 cut(s)	285
BspT107I	GGYRCC	2 cut(s)	220, 1709
BspTNI	GGTCTC	2 cut(s)	815, 1171
BsrGI	TGTACA	1 cut(s)	1270
BsrI	ACTGG	5 cut(s)	346, 417, 857, 926, 1642
BssECI	CCNNGG	4 cut(s)	216, 233, 1713, 1815
BssMI	GATC	8 cut(s)	187, 247, 583, 599, 834, 1055, 1408, 1561
BssNI	GRCGYC	1 cut(s)	112
BssSI	CACGAG	1 cut(s)	612
BssT1I	CCWWGG	2 cut(s)	216, 1713
Bst2BI	CACGAG	1 cut(s)	612
Bst2UI	CCWGG	2 cut(s)	1293, 1401
Bst4CI	ACNGT	5 cut(s)	291, 787, 868, 1215, 1879
Bst6I	CTCTTC	2 cut(s)	279, 732
BstACI	GRCGYC	1 cut(s)	112
BstAPI	GCANNNNNTGC	2 cut(s)	1217, 1709
BstAUI	TGTACA	1 cut(s)	1270
BstBAI	YACGTR	1 cut(s)	842
BstBI	TTCGAA	1 cut(s)	285
BstC8I	GCNNGC	2 cut(s)	727, 1701
BstENI	CCTNNNNNAGG	2 cut(s)	1704, 1948
BstFNI	CGCG	2 cut(s)	444, 1048
BstKTI	GATC	8 cut(s)	190, 250, 586, 602, 837, 1058, 1411, 1564
BstMAI	GTCTC	4 cut(s)	815, 1048, 1171, 1659
BstMBI	GATC	8 cut(s)	187, 247, 583, 599, 834, 1055, 1408, 1561
BstNI	CCWGG	2 cut(s)	1293, 1401
BstNSI	RCATGY	2 cut(s)	1301, 1586
BstSCI	CCNGG	3 cut(s)	1180, 1291, 1399
BstSFI	CTRYAG	2 cut(s)	801, 1701
BstSNI	TACGTA	1 cut(s)	842
BstUI	CGCG	2 cut(s)	444, 1048
BstV1I	GCAGC	5 cut(s)	1348, 1420, 1534, 1543, 1852
BstX2I	RGATCY	3 cut(s)	599, 834, 1055
BstYI	RGATCY	3 cut(s)	599, 834, 1055
Bsu36I	CCTNAGG	1 cut(s)	168
BsuRI	GGCC	4 cut(s)	173, 1154, 1721, 1744
BtsI	GCAGTG	1 cut(s)	1455
BtsIMutI	CAGTG	6 cut(s)	296, 424, 543, 783, 1455, 1888
BtuMI	TCGCGA	1 cut(s)	1048
Cac8I	GCNNGC	2 cut(s)	727, 1701
CciI	TCATGA	2 cut(s)	331, 817
CseI	GACGC	2 cut(s)	101, 1610
Csp6I	GTAC	7 cut(s)	78, 221, 498, 520, 869, 1006, 1271
CviQI	GTAC	7 cut(s)	78, 221, 498, 520, 869, 1006, 1271
DpnI	GATC	8 cut(s)	189, 249, 585, 601, 836, 1057, 1410, 1563
DpnII	GATC	8 cut(s)	187, 247, 583, 599, 834, 1055, 1408, 1561
DrdI	GACNNNNNNGTC	1 cut(s)	1675
DseDI	GACNNNNNNGTC	1 cut(s)	1675
Eam1104I	CTCTTC	2 cut(s)	279, 732
EarI	CTCTTC	2 cut(s)	279, 732
Ecl136II	GAGCTC	1 cut(s)	1225
Eco105I	TACGTA	1 cut(s)	842
Eco130I	CCWWGG	2 cut(s)	216, 1713
Eco24I	GRGCYC	2 cut(s)	453, 1227
Eco31I	GGTCTC	2 cut(s)	815, 1171
Eco47I	GGWCC	7 cut(s)	164, 422, 754, 793, 1289, 1376, 1639
Eco53kI	GAGCTC	1 cut(s)	1225
Eco57I	CTGAAG	1 cut(s)	624
Eco81I	CCTNAGG	1 cut(s)	168
Eco88I	CYCGRG	1 cut(s)	73
EcoICRI	GAGCTC	1 cut(s)	1225
EcoNI	CCTNNNNNAGG	2 cut(s)	1704, 1948
EcoO109I	RGGNCCY	2 cut(s)	164, 1289
EcoRII	CCWGG	2 cut(s)	1291, 1399
EcoT14I	CCWWGG	2 cut(s)	216, 1713
EcoT38I	GRGCYC	2 cut(s)	453, 1227
ErhI	CCWWGG	2 cut(s)	216, 1713
FalI	AAGNNNNNCTT	6 cut(s)	632, 664, 1061, 1093, 1476, 1508
FaqI	GGGAC	1 cut(s)	877
FauI	CCCGC	1 cut(s)	1256
FbaI	TGATCA	1 cut(s)	1408
Fnu4HI	GCNGC	5 cut(s)	1337, 1434, 1548, 1557, 1866
FriOI	GRGCYC	2 cut(s)	453, 1227
Fsp4HI	GCNGC	5 cut(s)	1337, 1434, 1548, 1557, 1866
FspBI	CTAG	3 cut(s)	1451, 1565, 1658
GluI	GCNGC	5 cut(s)	1337, 1434, 1548, 1557, 1866
GsaI	CCCAGC	1 cut(s)	993
GsuI	CTGGAG	3 cut(s)	177, 405, 1545
HaeIII	GGCC	4 cut(s)	173, 1154, 1721, 1744
HapII	CCGG	2 cut(s)	1182, 1630
HgaI	GACGC	2 cut(s)	101, 1610
Hin1I	GRCGYC	1 cut(s)	112
HincII	GTYRAC	1 cut(s)	478
HindII	GTYRAC	1 cut(s)	478
HindIII	AAGCTT	1 cut(s)	578
HinfI	GANTC	2 cut(s)	1315, 1620
HpaII	CCGG	2 cut(s)	1182, 1630
HphI	GGTGA	5 cut(s)	368, 970, 1178, 1408, 1910
Hpy166II	GTNNAC	3 cut(s)	376, 478, 500
Hpy188I	TCNGA	7 cut(s)	147, 208, 516, 604, 935, 945, 1948
Hpy8I	GTNNAC	3 cut(s)	376, 478, 500
Hpy99I	CGWCG	1 cut(s)	372
HpyAV	CCTTC	9 cut(s)	94, 127, 292, 642, 1280, 1472, 1513, 1690, 1700
HpyCH4III	ACNGT	5 cut(s)	291, 787, 868, 1215, 1879
HpyCH4IV	ACGT	1 cut(s)	841
HpyCH4V	TGCA	8 cut(s)	13, 39, 701, 908, 1067, 1211, 1309, 1703
HpySE526I	ACGT	1 cut(s)	841
Hsp92I	GRCGYC	1 cut(s)	112
KpnI	GGTACC	1 cut(s)	224
Ksp22I	TGATCA	1 cut(s)	1408
Kzo9I	GATC	8 cut(s)	187, 247, 583, 599, 834, 1055, 1408, 1561
LmnI	GCTCC	6 cut(s)	456, 652, 776, 1222, 1402, 1795
Lsp1109I	GCAGC	5 cut(s)	1348, 1420, 1534, 1543, 1852
LweI	GCATC	5 cut(s)	14, 91, 1186, 1498, 1831
MaeI	CTAG	3 cut(s)	1451, 1565, 1658
MaeII	ACGT	1 cut(s)	841
MaeIII	GTNAC	2 cut(s)	842, 1474
MalI	GATC	8 cut(s)	189, 249, 585, 601, 836, 1057, 1410, 1563
MboI	GATC	8 cut(s)	187, 247, 583, 599, 834, 1055, 1408, 1561
MboII	GAAGA	5 cut(s)	48, 266, 347, 749, 1774
MfeI	CAATTG	1 cut(s)	243
MflI	RGATCY	3 cut(s)	599, 834, 1055
MhlI	GDGCHC	5 cut(s)	308, 354, 453, 1227, 1450
MluCI	AATT	9 cut(s)	202, 243, 491, 537, 624, 903, 1038, 1096, 1902
MluI	ACGCGT	1 cut(s)	442
MseI	TTAA	7 cut(s)	129, 179, 435, 696, 918, 1229, 1607
MslI	CAYNNNNRTG	6 cut(s)	515, 788, 816, 1116, 1581, 1803
MspA1I	CMGCKG	1 cut(s)	1339
MspI	CCGG	2 cut(s)	1182, 1630
MspR9I	CCNGG	3 cut(s)	1182, 1293, 1401
MunI	CAATTG	1 cut(s)	243
MvaI	CCWGG	2 cut(s)	1293, 1401
MvnI	CGCG	2 cut(s)	444, 1048
NciI	CCSGG	1 cut(s)	1182
NdeII	GATC	8 cut(s)	187, 247, 583, 599, 834, 1055, 1408, 1561
NlaIV	GGNNCC	6 cut(s)	222, 452, 836, 1057, 1186, 1711
NmeAIII	GCCGAG	1 cut(s)	1840
NruI	TCGCGA	1 cut(s)	1048
NspI	RCATGY	2 cut(s)	1301, 1586
NspV	TTCGAA	1 cut(s)	285
PagI	TCATGA	2 cut(s)	331, 817
PciI	ACATGT	1 cut(s)	1297
PfeI	GAWTC	2 cut(s)	1315, 1620
PflMI	CCANNNNNTGG	1 cut(s)	446
PfoI	TCCNGGA	1 cut(s)	1399
PkrI	GCNGC	5 cut(s)	1338, 1435, 1549, 1558, 1867
Ppu21I	YACGTR	1 cut(s)	842
PpuMI	RGGWCCY	2 cut(s)	164, 1289
PscI	ACATGT	1 cut(s)	1297
PsiI	TTATAA	1 cut(s)	750
Psp124BI	GAGCTC	1 cut(s)	1227
Psp5II	RGGWCCY	2 cut(s)	164, 1289
Psp6I	CCWGG	2 cut(s)	1291, 1399
PspFI	CCCAGC	1 cut(s)	989
PspGI	CCWGG	2 cut(s)	1291, 1399
PspN4I	GGNNCC	6 cut(s)	222, 452, 836, 1057, 1186, 1711
PspPPI	RGGWCCY	2 cut(s)	164, 1289
PstI	CTGCAG	1 cut(s)	1705
PsuI	RGATCY	3 cut(s)	599, 834, 1055
PvuII	CAGCTG	1 cut(s)	1339
RruI	TCGCGA	1 cut(s)	1048
RsaI	GTAC	7 cut(s)	79, 222, 499, 521, 870, 1007, 1272
RsaNI	GTAC	7 cut(s)	78, 221, 498, 520, 869, 1006, 1271
RseI	CAYNNNNRTG	6 cut(s)	515, 788, 816, 1116, 1581, 1803
SacI	GAGCTC	1 cut(s)	1227
SaqAI	TTAA	7 cut(s)	129, 179, 435, 696, 918, 1229, 1607
SatI	GCNGC	5 cut(s)	1337, 1434, 1548, 1557, 1866
Sau3AI	GATC	8 cut(s)	187, 247, 583, 599, 834, 1055, 1408, 1561
ScaI	AGTACT	1 cut(s)	79
ScrFI	CCNGG	3 cut(s)	1182, 1293, 1401
SduI	GDGCHC	5 cut(s)	308, 354, 453, 1227, 1450
SfaNI	GCATC	5 cut(s)	14, 91, 1186, 1498, 1831
SfcI	CTRYAG	2 cut(s)	801, 1701
SfuI	TTCGAA	1 cut(s)	285
SinI	GGWCC	7 cut(s)	164, 422, 754, 793, 1289, 1376, 1639
SmiMI	CAYNNNNRTG	6 cut(s)	515, 788, 816, 1116, 1581, 1803
SmlI	CTYRAG	3 cut(s)	656, 1174, 1587
SmoI	CTYRAG	3 cut(s)	656, 1174, 1587
SnaBI	TACGTA	1 cut(s)	842
Sse9I	AATT	9 cut(s)	202, 243, 491, 537, 624, 903, 1038, 1096, 1902
SsiI	CCGC	4 cut(s)	425, 1003, 1220, 1249
SspI	AATATT	1 cut(s)	1441
SspMI	CTAG	3 cut(s)	1451, 1565, 1658
SstI	GAGCTC	1 cut(s)	1227
StyD4I	CCNGG	3 cut(s)	1180, 1291, 1399
StyI	CCWWGG	2 cut(s)	216, 1713
TaaI	ACNGT	5 cut(s)	291, 787, 868, 1215, 1879
TaiI	ACGT	1 cut(s)	844
TaqI	TCGA	4 cut(s)	285, 367, 735, 1623
TaqII	GACCGA	1 cut(s)	1364
TasI	AATT	9 cut(s)	202, 243, 491, 537, 624, 903, 1038, 1096, 1902
TatI	WGTACW	3 cut(s)	77, 519, 1270
TfiI	GAWTC	2 cut(s)	1315, 1620
Tru1I	TTAA	7 cut(s)	129, 179, 435, 696, 918, 1229, 1607
Tru9I	TTAA	7 cut(s)	129, 179, 435, 696, 918, 1229, 1607
TscAI	CASTG	6 cut(s)	296, 424, 550, 790, 1462, 1888
TseI	GCWGC	5 cut(s)	1336, 1433, 1547, 1556, 1865
TspRI	CASTG	6 cut(s)	296, 424, 550, 790, 1462, 1888
Van91I	CCANNNNNTGG	1 cut(s)	446
VpaK11BI	GGWCC	7 cut(s)	164, 422, 754, 793, 1289, 1376, 1639
XagI	CCTNNNNNAGG	2 cut(s)	1704, 1948
XapI	RAATTY	1 cut(s)	1096
XbaI	TCTAGA	1 cut(s)	1657
XceI	RCATGY	2 cut(s)	1301, 1586
XspI	CTAG	3 cut(s)	1451, 1565, 1658
ZrmI	AGTACT	1 cut(s)	79

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.