Phosphomethylpyrimidine synthase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G29630 AT2G29630 AT2G29630 AT2G29630 |
| fragaria_vesca | FvH4_3g38200 FvH4_3g38200 FvH4_3g38200 FvH4_3g38200 |
| malus_domestica | MD03G1074000.v1.1 MD11G1080300.v1.1 |
| prunus_persica | Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 Prupe.6G060700_v2.0.a1 |
| pyrus_communis | pycom03g05980 pycom11g06760 |
| rosa_chinensis | RchiOBHm_Chr5g0068641 RchiOBHm_Chr5g0068681 |
| rosa_laevigata | RLG00000035986 RLG00000035996 |
| rosa_multiflora | Rmu_sc0000376.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00012160 Rroxscaffold_1G00012240 |
| rosa_rugosa | Rorug05G0392100 Rorug05G0392200 Rorug05G0392200 Rorug05G0392200 Rorug05G0392200 Rorug05G0392200 |
| rosa_samantha | Rh5AG449800 Rh5BG468000 Rh5CG489900 Rh5DG481300 |
| rosa_wichuraiana | Rw5G041990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 167 |
| AfaI | GTAC | 1 cut(s) | 21 |
| AgsI | TTSAA | 1 cut(s) | 205 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 45, 77 |
| Alw26I | GTCTC | 1 cut(s) | 98 |
| ApoI | RAATTY | 1 cut(s) | 167 |
| BcoDI | GTCTC | 1 cut(s) | 98 |
| BmcAI | AGTACT | 1 cut(s) | 21 |
| Bse1I | ACTGG | 1 cut(s) | 17 |
| BseNI | ACTGG | 1 cut(s) | 17 |
| BsmAI | GTCTC | 1 cut(s) | 98 |
| BsmI | GAATGC | 1 cut(s) | 60 |
| Bsp143I | GATC | 1 cut(s) | 37 |
| BsrI | ACTGG | 1 cut(s) | 17 |
| BssMI | GATC | 1 cut(s) | 37 |
| BstC8I | GCNNGC | 2 cut(s) | 92, 231 |
| BstKTI | GATC | 1 cut(s) | 40 |
| BstMAI | GTCTC | 1 cut(s) | 98 |
| BstMBI | GATC | 1 cut(s) | 37 |
| BstNSI | RCATGY | 1 cut(s) | 233 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 131 |
| Cac8I | GCNNGC | 2 cut(s) | 92, 231 |
| Csp6I | GTAC | 1 cut(s) | 20 |
| CviAII | CATG | 2 cut(s) | 131, 230 |
| CviJI | RGCY | 2 cut(s) | 16, 182 |
| CviKI_1 | RGCY | 2 cut(s) | 16, 182 |
| CviQI | GTAC | 1 cut(s) | 20 |
| DpnI | GATC | 1 cut(s) | 39 |
| DpnII | GATC | 1 cut(s) | 37 |
| FaeI | CATG | 2 cut(s) | 134, 233 |
| FaiI | YATR | 6 cut(s) | 110, 117, 132, 143, 231, 236 |
| FatI | CATG | 2 cut(s) | 130, 229 |
| Hin1II | CATG | 2 cut(s) | 134, 233 |
| HinfI | GANTC | 1 cut(s) | 96 |
| Hpy99I | CGWCG | 1 cut(s) | 74 |
| HpyAV | CCTTC | 1 cut(s) | 158 |
| Hsp92II | CATG | 2 cut(s) | 134, 233 |
| Kzo9I | GATC | 1 cut(s) | 37 |
| LpnPI | CCDG | 2 cut(s) | 30, 104 |
| MaeIII | GTNAC | 1 cut(s) | 82 |
| MalI | GATC | 1 cut(s) | 39 |
| MboI | GATC | 1 cut(s) | 37 |
| MfeI | CAATTG | 1 cut(s) | 9 |
| MluCI | AATT | 3 cut(s) | 9, 41, 167 |
| MlyI | GAGTC | 1 cut(s) | 105 |
| MunI | CAATTG | 1 cut(s) | 9 |
| Mva1269I | GAATGC | 1 cut(s) | 60 |
| NdeII | GATC | 1 cut(s) | 37 |
| NlaIII | CATG | 2 cut(s) | 134, 233 |
| NmuCI | GTSAC | 1 cut(s) | 82 |
| NspI | RCATGY | 1 cut(s) | 233 |
| PaeI | GCATGC | 1 cut(s) | 233 |
| PctI | GAATGC | 1 cut(s) | 60 |
| PleI | GAGTC | 1 cut(s) | 104 |
| PpsI | GAGTC | 1 cut(s) | 104 |
| RsaI | GTAC | 1 cut(s) | 21 |
| RsaNI | GTAC | 1 cut(s) | 20 |
| Sau3AI | GATC | 1 cut(s) | 37 |
| ScaI | AGTACT | 1 cut(s) | 21 |
| SchI | GAGTC | 1 cut(s) | 105 |
| SphI | GCATGC | 1 cut(s) | 233 |
| Sse9I | AATT | 3 cut(s) | 9, 41, 167 |
| TaqI | TCGA | 1 cut(s) | 72 |
| TasI | AATT | 3 cut(s) | 9, 41, 167 |
| TatI | WGTACW | 1 cut(s) | 19 |
| TseFI | GTSAC | 1 cut(s) | 82 |
| Tsp45I | GTSAC | 1 cut(s) | 82 |
| TspDTI | ATGAA | 1 cut(s) | 104 |
| XapI | RAATTY | 1 cut(s) | 167 |
| XceI | RCATGY | 1 cut(s) | 233 |
| ZrmI | AGTACT | 1 cut(s) | 21 |