Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0009274

Physical Location & Seq

Genomic Coordinates Forward (+)

10756101 .. 10762550

Gene Structure 6450 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1118200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3162 bp

ATGGATTCCTCGCAGTCCCAACAGAGAAGAGGAGGATTGGTATCACTATCACCGTCACAGACGCCAAGGTCGAGCGACAAGTCGGTGCGAGATCTGCGATCCGGGGATTCGAATTCGACAAACAGGCATGAGAAGGAAAAGGGTGTCAATGTGCAGGTCCTTGTGCGTTGCAGGCCATTGAGTGAAGACGAAGTGAGGGTGCATACGCCCGTCGTGATTTCTTGCAATGAGGGTAGAAGGGAAGTTGCTGCAATTCAGAATATAGCTAACAAGCAGATTGATAGAACCTTTGCGTTTGACAAGGTCTTTGGTCCAGCATCCCAACAGAAGGAACTGTATGACCAGGCTGTCTCTCCTATCGTAAATGAAGTGCTTGAGGGATATAACTGCACTATCTTTGCCTATGGTCAGACAGGGACGGGGAAAACATACACAATGGAGGGAGGAGCAAGAAAGAAGAATGGGGAATTTCCTAGTGATGCGGGTGTTATCCCAAGAGCCGTTAAACAAATTTTTGACATATTAGAAGCTCAGGTTGCTGAGTATAGCATGAAAGTCACATTTTTAGAGCTGTACAATGAGGAGATAAGTGATCTTTTGGCTCCTGATGAGAACACGAAATTTGTAGATGACAAATCAAAGAAACCCATAGCTCTCATGGAAGATGGAAAAGGTGGTGTTTTTGTACGAGGCTTAGAAGAAGAGATAGTGTGCACAGCAAATGAAATTTACAAAATCTTGGAGAAGGGATCTGCAAAAAGGCGAACAGCTGAGACTCTTCTCAACAAGCAAAGCAGCCGTTCACACTCAATATTTTCCATCACAATCCATATTAAGGAATGCACTCCAGAGGGTGAAGAAATGATTAAATGTGGGAAGCTGAATCTTGTCGACCTTGCTGGTTCTGAGAACATTTCGCGCTCTGGTGCAAGAGAGGGAAGAGCAAGAGAAGCTGGGGAGATAAATAAGAGCTTGCTTACTCTTGGTCGTGTCATTAATGCTCTAGTTGAGCACTCTGGTCATGTTCCATACAGGGATAGTAAACTAACAAGATTGCTGAGAGACTCCTTAGGAGGGAAAACAAAGACATGCATAATTGCTACCGTATCACCCTCCATCCATTGTTTGGAAGAAACACTCAACACCTTAGACTATGCACACCGTGCCAAAAATATAAAGAACAAACCAGAGGTCAATCAAAAAATGATGAAGTCTGCTTTGATTAAGGATTTGTATTCTGAGATTGATCGGCTCAAGCAAGAGGTATATGCTGCCAGAGAGAAGAATGGAATCTATATACCACGTGATCGTTATCTTAGTGAAGAAGCAGAGAAGAAGGCAATGGCTGAAAAGATAGAGCGGATGGAACTTGATTCTGATTCCAAAGACAAGCAGCAATTGCAGGAGCTTCAGGAACTTTACAGTTCTCAGCAACTTTTGGCTGTAGAATTGAGTGATAAACTTGAAAAAACTGAGAAAAAGCTTGAGGAAACTGGACATGCGCTGTATGATCTTGAGGACAAGCATCGACAAGCAAATGCGACCATCAAAGAGAAGGAATTTCTGATAGTGAATCTCCTCAAATCGGAGAAATCGCTCGTCGGGCGTGCATTTGAGCTAAGAGCAGAGCTAGAGAATGCTGCATCAGATGTGTCCAGTTTATTTGCCAAAATTGAGCGCAAGGACAAAATTGAAGATGGAAACCGGATACTAGTCCAGAAATTTCAGTCCCAATTAACTCAGCAGCTTGAAGTCTTGCATAAGATTGTGGCAGTTGCAGTGACACAACAGGAGCAGCAATTAAAAGATATGGAAGAGGACATGCAGTCCTTTGTATCAACGAAGGCGGAGGCTACTGAAGAACTACAAGGGAGATTAGGAAAGCTTAAAAACATGTATGGTTCTGGTATTAAAGCTCTAGATGGTATAGCTGGGGATCTTGAAGGAAATTCGCAATCAACGTTTTCTCATCTAAACTCTGAAGTTTCTAACCATTCTTCTGCTCTGGAAGATCTCTTCAAAGGAATTGCTTCAGAAGCTGATGCATTACTCAATGATCTTCAAGGTAATCTTCACAACCAAGAGGAAAAGCTAAATGCATTTGCACAACAACAGCGTGAGGCTCATGCCAGAGCTGTCGAAACTGCACGTTCAGTTTCTAAAGTAACTGTGGACTTTTTCAAAACTCTAGACTTGCATGCATCCAATCTGACCCAAATTGTGGAAGAAGCACAAACTGTCAACGACAAGAAATTGTCTGAACTTGAAGAGAAGTTTGAGGAGTGTGCTGCTAATGAAGAAAGGCAGTTACTAGAGAAAGTGGCAGAGCTGCTGGCAAGTTCAAATGCCAGGAAGAAAAAACTGGTACAAACTGCTGTAAATGATCTTCGAGAGAGTGCAACAAGCAGAACCAACAAAATACAGCAAGAAATGTCAACCATGCAAGATTCAACTTCGTCTATCAAAACCAAATGGACACTTCACATGGAAAAAACAGAATCCCATTACCGTGAAGACACAACGGCTGTGGAATGTGGAAAGAAAGACATGGAGGAGGTTCTACAGAATTGTTTGAAGCAGGCATCAGTGGGTGCAGCACAGTGGAAGAAAGCTCAGGAGTCCTTGCTCAATCTAGAAAAGAGAAATGTTGCTTCTGTGGACTCTATTGTTAGGAGGGGAACGGAAGTCAATCAAACCTTACGTGATAGGTTCTCCTCGTCTGTGTCAGCTGCACTAGAAGATGTAGACATCGCAGACAAGAATCTCCTTTCCTCCATAGATCATTCATTACAACTTGACCACGAGGCATGTGGAAATCTAAATTCAATGATTGTTCCATGTTGCGGGGATCTGAGGGAACTAAAGGGAGGTCACTACCACAATATTGTTGAAATCACCGAAAATGCAGGAAAATTTCTTCTGGATGAATACGTGGTGGACGAACCATCTTGTTCCACGCCAAGAAAGAGGTCATTCAATCTTCCAAGCGTTGCATCAATTGAAGAACTCAGGACTCCAGCTTTTGAGGAGTTGTTGAGGCTATTCTGGGATGAAAGATCGGCGAAACAGCAAGCCAATGGAGACATAAAACACATCGCAGGGGCGTACGAGGCTGCTCAATCCATTAGAGACTCCAGAGTTCCTCTCACTGCTATTAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000281 GO:0000902 GO:0000910 GO:0000911 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005819 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005886 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0008150 GO:0008574 GO:0009653 GO:0009826 GO:0009987 GO:0015630 GO:0016020 GO:0016043 GO:0016049 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0030865 GO:0031122 GO:0032502 GO:0032506 GO:0032989 GO:0032991 GO:0040007 GO:0042623 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043622 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0048589 GO:0048856 GO:0048869 GO:0051301 GO:0060560 GO:0061640 GO:0071840 GO:0071944 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:1902410 GO:1902850 GO:1903047 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

1054

Amino Acids

117.79

Weight (kDa)

5.64

Isoelectric Point (pI)

50.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	50 - 200	5.2e-28	Microtubule binding
Kinesin	PF00225	56 - 392	2.2e-116	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009274)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28620 AT2G28620 AT2G28620 AT3G45850 AT3G45850
fragaria_vesca	FvH4_3g34440 FvH4_3g34440
malus_domestica	MD03G1105700.v1.1 MD11G1118200.v1.1
prunus_persica	Prupe.6G088500_v2.0.a1
pyrus_communis	pycom03g08490 pycom11g09910
rosa_chinensis	RchiOBHm_Chr5g0062081
rosa_laevigata	RLG00000035530
rosa_multiflora	Rmu_sc0002296.1_g000013
rosa_roxburghii	Rroxscaffold_1G00018630
rosa_rugosa	Rorug05G0345900 Rorug05G0345900
rosa_samantha	Rh5AG407500 Rh5BG420800 Rh5DG435900
rosa_wichuraiana	Rw5G038370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	67, 347
Acc36I	ACCTGC	1 cut(s)	145
AccB7I	CCANNNNNTGG	2 cut(s)	1126, 2221
AccBSI	CCGCTC	1 cut(s)	1360
AccI	GTMKAC	2 cut(s)	891, 2745
AccII	CGCG	1 cut(s)	919
AciI	CCGC	4 cut(s)	482, 1360, 1847, 2844
AclI	AACGTT	1 cut(s)	1961
AclWI	GGATC	4 cut(s)	93, 757, 1944, 2856
AcuI	CTGAAG	4 cut(s)	1394, 1878, 2001, 2016
AcvI	CACGTG	1 cut(s)	1304
AcyI	GRCGYC	1 cut(s)	62
AdeI	CACNNNGTG	1 cut(s)	1163
AfaI	GTAC	4 cut(s)	575, 687, 2367, 3107
AfiI	CCNNNNNNNGG	7 cut(s)	328, 835, 1074, 1126, 1585, 2221, 2843
AflIII	ACRYGT	1 cut(s)	1893
AhdI	GACNNNNNGTC	1 cut(s)	1825
AhlI	ACTAGT	1 cut(s)	1711
AjnI	CCWGG	2 cut(s)	342, 2348
Alw21I	GWGCWC	2 cut(s)	716, 1014
Alw26I	GTCTC	5 cut(s)	355, 767, 1056, 3075, 3123
Alw44I	GTGCAC	1 cut(s)	712
AlwI	GGATC	4 cut(s)	93, 757, 1944, 2856
AlwNI	CAGNNNCTG	1 cut(s)	2039
AoxI	GGCC	1 cut(s)	173
ApaLI	GTGCAC	1 cut(s)	712
ArsI	GACNNNNNNTTYG	4 cut(s)	290, 322, 1176, 1208
AseI	ATTAAT	1 cut(s)	996
Asp700I	GAANNNNTTC	1 cut(s)	2029
AspLEI	GCGC	3 cut(s)	921, 1504, 1680
AspS9I	GGNCC	2 cut(s)	157, 311
AsuC2I	CCSGG	1 cut(s)	103
AsuHPI	GGTGA	4 cut(s)	42, 866, 1101, 2887
AsuII	TTCGAA	1 cut(s)	110
AvaII	GGWCC	2 cut(s)	157, 311
AxyI	CCTNAGG	1 cut(s)	1069
BaeGI	GKGCMC	1 cut(s)	716
BarI	GAAGNNNNNNTAC	2 cut(s)	2370, 2402
BauI	CACGAG	1 cut(s)	2801
BbrPI	CACGTG	1 cut(s)	1304
BbsI	GAAGAC	2 cut(s)	192, 2520
Bbv12I	GWGCWC	2 cut(s)	716, 1014
BccI	CCATC	8 cut(s)	659, 827, 1124, 1357, 1553, 1691, 1916, 2953
BceAI	ACGGC	3 cut(s)	485, 783, 2538
BciT130I	CCWGG	2 cut(s)	344, 2350
BciVI	GTATCC	1 cut(s)	1701
BcnI	CCSGG	1 cut(s)	103
BcoDI	GTCTC	5 cut(s)	355, 767, 1056, 3075, 3123
BcuI	ACTAGT	1 cut(s)	1711
BfaI	CTAG	9 cut(s)	474, 1004, 1631, 1712, 1919, 2189, 2312, 2633, 2735
BfmI	CTRYAG	2 cut(s)	1443, 2561
BfuAI	ACCTGC	1 cut(s)	145
BfuI	GTATCC	1 cut(s)	1701
BglII	AGATCT	2 cut(s)	91, 2011
Bme1390I	CCNGG	3 cut(s)	103, 344, 2350
Bme18I	GGWCC	2 cut(s)	157, 311
BmeRI	GACNNNNNGTC	1 cut(s)	1825
BmgT120I	GGNCC	2 cut(s)	157, 311
BmiI	GGNNCC	1 cut(s)	603
BmrFI	CCNGG	3 cut(s)	103, 344, 2350
BmsI	GCATC	8 cut(s)	326, 469, 1534, 1652, 2032, 2210, 2591, 3002
BpiI	GAAGAC	2 cut(s)	192, 2520
BplI	GAGNNNNNCTC	2 cut(s)	3129, 3161
BpmI	CTGGAG	3 cut(s)	831, 3000, 3118
Bpu10I	CCTNAGC	2 cut(s)	531, 2613
Bpu14I	TTCGAA	1 cut(s)	110
BpuEI	CTTGAG	4 cut(s)	395, 1238, 1505, 1535
BpuMI	CCSGG	1 cut(s)	103
BsaAI	YACGTR	3 cut(s)	1304, 2702, 2932
BsaBI	GATNNNNATC	2 cut(s)	40, 1311
BsaHI	GRCGYC	1 cut(s)	62
BsaJI	CCNNGG	2 cut(s)	65, 102
BsaWI	WCCGGW	1 cut(s)	1704
BsaXI	ACNNNNNCTCC	2 cut(s)	24, 54
Bsc4I	CCNNNNNNNGG	7 cut(s)	328, 835, 1074, 1126, 1585, 2221, 2843
Bse1I	ACTGG	3 cut(s)	1498, 1656, 2367
Bse21I	CCTNAGG	1 cut(s)	1069
Bse3DI	GCAATG	2 cut(s)	232, 1347
Bse8I	GATNNNNATC	2 cut(s)	40, 1311
BseBI	CCWGG	2 cut(s)	344, 2350
BseDI	CCNNGG	2 cut(s)	65, 102
BseGI	GGATG	6 cut(s)	317, 1116, 1368, 2201, 2929, 3055
BseJI	GATNNNNATC	2 cut(s)	40, 1311
BseLI	CCNNNNNNNGG	7 cut(s)	328, 835, 1074, 1126, 1585, 2221, 2843
BseMI	GCAATG	2 cut(s)	232, 1347
BseNI	ACTGG	3 cut(s)	1498, 1656, 2367
BseRI	GAGGAG	8 cut(s)	45, 459, 596, 1568, 2294, 2567, 2704, 3041
BseSI	GKGCMC	1 cut(s)	716
BseYI	CCCAGC	2 cut(s)	953, 1931
BsgI	GTGCAG	5 cut(s)	173, 373, 2130, 2613, 2715
Bsh1236I	CGCG	1 cut(s)	919
BshFI	GGCC	1 cut(s)	175
BsiHKAI	GWGCWC	2 cut(s)	716, 1014
BsiSI	CCGG	2 cut(s)	102, 1705
BsiWI	CGTACG	1 cut(s)	3105
BslFI	GGGAC	2 cut(s)	430, 1714
BslI	CCNNNNNNNGG	7 cut(s)	328, 835, 1074, 1126, 1585, 2221, 2843
BsmAI	GTCTC	5 cut(s)	355, 767, 1056, 3075, 3123
BsmFI	GGGAC	2 cut(s)	430, 1714
BsmI	GAATGC	2 cut(s)	845, 1642
BsnI	GGCC	1 cut(s)	175
Bsp119I	TTCGAA	1 cut(s)	110
Bsp1286I	GDGCHC	2 cut(s)	716, 1014
Bsp1407I	TGTACA	1 cut(s)	573
BspACI	CCGC	4 cut(s)	482, 1360, 1847, 2844
BspANI	GGCC	1 cut(s)	175
BspFNI	CGCG	1 cut(s)	919
BspLI	GGNNCC	1 cut(s)	603
BspMI	ACCTGC	1 cut(s)	145
BspPI	GGATC	4 cut(s)	93, 757, 1944, 2856
BspQI	GCTCTTC	1 cut(s)	934
BspT104I	TTCGAA	1 cut(s)	110
BsrBI	CCGCTC	1 cut(s)	1360
BsrDI	GCAATG	2 cut(s)	232, 1347
BsrGI	TGTACA	1 cut(s)	573
BsrI	ACTGG	3 cut(s)	1498, 1656, 2367
BssECI	CCNNGG	2 cut(s)	65, 102
BssNI	GRCGYC	1 cut(s)	62
BssSI	CACGAG	1 cut(s)	2801
BssT1I	CCWWGG	1 cut(s)	65
Bst2BI	CACGAG	1 cut(s)	2801
Bst2UI	CCWGG	2 cut(s)	344, 2350
Bst4CI	ACNGT	9 cut(s)	54, 336, 1105, 1163, 1424, 2170, 2239, 2510, 2601
Bst6I	CTCTTC	7 cut(s)	22, 696, 783, 934, 1809, 2021, 2262
BstACI	GRCGYC	1 cut(s)	62
BstAPI	GCANNNNNTGC	2 cut(s)	1163, 1399
BstAUI	TGTACA	1 cut(s)	573
BstBAI	YACGTR	3 cut(s)	1304, 2702, 2932
BstBI	TTCGAA	1 cut(s)	110
BstC8I	GCNNGC	7 cut(s)	173, 974, 1608, 2199, 2334, 2580, 3072
BstF5I	GGATG	6 cut(s)	317, 1116, 1368, 2201, 2929, 3055
BstFNI	CGCG	1 cut(s)	919
BstHHI	GCGC	3 cut(s)	921, 1504, 1680
BstMAI	GTCTC	5 cut(s)	355, 767, 1056, 3075, 3123
BstMWI	GCNNNNNNNGC	9 cut(s)	94, 172, 536, 950, 1163, 1399, 1603, 2036, 3110
BstNI	CCWGG	2 cut(s)	344, 2350
BstNSI	RCATGY	6 cut(s)	1092, 1502, 1825, 1897, 2201, 2811
BstSCI	CCNGG	3 cut(s)	101, 342, 2348
BstSFI	CTRYAG	2 cut(s)	1443, 2561
BstSLI	GKGCMC	1 cut(s)	716
BstUI	CGCG	1 cut(s)	919
BstV2I	GAAGAC	2 cut(s)	192, 2520
BstX2I	RGATCY	5 cut(s)	91, 749, 1936, 2011, 2848
BstYI	RGATCY	5 cut(s)	91, 749, 1936, 2011, 2848
Bsu36I	CCTNAGG	1 cut(s)	1069
BsuI	GTATCC	1 cut(s)	1701
BsuRI	GGCC	1 cut(s)	175
BtgZI	GCGATG	2 cut(s)	2734, 3079
BtsCI	GGATG	6 cut(s)	317, 1116, 1368, 2201, 2929, 3055
BtsI	GCAGTG	2 cut(s)	1785, 3147
BtsIMutI	CAGTG	4 cut(s)	1785, 2592, 2606, 3147
BveI	ACCTGC	1 cut(s)	145
Cac8I	GCNNGC	7 cut(s)	173, 974, 1608, 2199, 2334, 2580, 3072
CaiI	CAGNNNCTG	1 cut(s)	2039
CfoI	GCGC	3 cut(s)	921, 1504, 1680
Cfr13I	GGNCC	2 cut(s)	157, 311
CseI	GACGC	1 cut(s)	70
Csp6I	GTAC	4 cut(s)	574, 686, 2366, 3106
CspCI	CAANNNNNGTGG	2 cut(s)	2508, 2543
CviQI	GTAC	4 cut(s)	574, 686, 2366, 3106
DraIII	CACNNNGTG	1 cut(s)	1163
DrdI	GACNNNNNNGTC	2 cut(s)	67, 347
DriI	GACNNNNNGTC	1 cut(s)	1825
DseDI	GACNNNNNNGTC	2 cut(s)	67, 347
Eam1104I	CTCTTC	7 cut(s)	22, 696, 783, 934, 1809, 2021, 2262
Eam1105I	GACNNNNNGTC	1 cut(s)	1825
EarI	CTCTTC	7 cut(s)	22, 696, 783, 934, 1809, 2021, 2262
EciI	GGCGGA	1 cut(s)	1862
Eco130I	CCWWGG	1 cut(s)	65
Eco47I	GGWCC	2 cut(s)	157, 311
Eco57I	CTGAAG	4 cut(s)	1394, 1878, 2001, 2016
Eco72I	CACGTG	1 cut(s)	1304
Eco81I	CCTNAGG	1 cut(s)	1069
EcoO109I	RGGNCCY	1 cut(s)	157
EcoRI	GAATTC	1 cut(s)	112
EcoRII	CCWGG	2 cut(s)	342, 2348
EcoT14I	CCWWGG	1 cut(s)	65
EcoT22I	ATGCAT	4 cut(s)	1094, 2047, 2101, 2203
ErhI	CCWWGG	1 cut(s)	65
FalI	AAGNNNNNCTT	2 cut(s)	2055, 2087
FaqI	GGGAC	2 cut(s)	430, 1714
FauI	CCCGC	2 cut(s)	475, 2837
FblI	GTMKAC	2 cut(s)	891, 2745
FokI	GGATG	6 cut(s)	304, 1103, 1375, 2188, 2936, 3062
FspBI	CTAG	9 cut(s)	474, 1004, 1631, 1712, 1919, 2189, 2312, 2633, 2735
GlaI	GCGC	3 cut(s)	920, 1503, 1679
GsaI	CCCAGC	2 cut(s)	957, 1935
GsuI	CTGGAG	3 cut(s)	831, 3000, 3118
HaeIII	GGCC	1 cut(s)	175
HapII	CCGG	2 cut(s)	102, 1705
HgaI	GACGC	1 cut(s)	70
HhaI	GCGC	3 cut(s)	921, 1504, 1680
Hin1I	GRCGYC	1 cut(s)	62
Hin6I	GCGC	3 cut(s)	919, 1502, 1678
HinP1I	GCGC	3 cut(s)	919, 1502, 1678
HincII	GTYRAC	3 cut(s)	892, 2242, 2436
HindII	GTYRAC	3 cut(s)	892, 2242, 2436
HindIII	AAGCTT	2 cut(s)	1481, 1883
HpaII	CCGG	2 cut(s)	102, 1705
HphI	GGTGA	4 cut(s)	42, 866, 1101, 2887
Hpy99I	CGWCG	2 cut(s)	215, 1604
HpyAV	CCTTC	8 cut(s)	127, 231, 322, 739, 1330, 1549, 1837, 1937
HpyCH4III	ACNGT	9 cut(s)	54, 336, 1105, 1163, 1424, 2170, 2239, 2510, 2601
HpyCH4IV	ACGT	5 cut(s)	1303, 1961, 2149, 2701, 2931
HpyF10VI	GCNNNNNNNGC	9 cut(s)	94, 172, 536, 950, 1163, 1399, 1603, 2036, 3110
HpySE526I	ACGT	5 cut(s)	1303, 1961, 2149, 2701, 2931
Hsp92I	GRCGYC	1 cut(s)	62
HspAI	GCGC	3 cut(s)	919, 1502, 1678
LguI	GCTCTTC	1 cut(s)	934
LmnI	GCTCC	4 cut(s)	446, 607, 1405, 1792
LweI	GCATC	8 cut(s)	326, 469, 1534, 1652, 2032, 2210, 2591, 3002
MaeI	CTAG	9 cut(s)	474, 1004, 1631, 1712, 1919, 2189, 2312, 2633, 2735
MaeII	ACGT	5 cut(s)	1303, 1961, 2149, 2701, 2931
MaeIII	GTNAC	6 cut(s)	54, 556, 1780, 2164, 2307, 2870
MbiI	CCGCTC	1 cut(s)	1360
MfeI	CAATTG	2 cut(s)	1397, 2997
MflI	RGATCY	5 cut(s)	91, 749, 1936, 2011, 2848
MhlI	GDGCHC	2 cut(s)	716, 1014
MlyI	GAGTC	6 cut(s)	769, 1058, 2627, 2654, 3007, 3125
Mph1103I	ATGCAT	4 cut(s)	1094, 2047, 2101, 2203
MroXI	GAANNNNTTC	1 cut(s)	2029
MslI	CAYNNNNRTG	1 cut(s)	2508
MspA1I	CMGCKG	2 cut(s)	770, 2729
MspI	CCGG	2 cut(s)	102, 1705
MspR9I	CCNGG	3 cut(s)	103, 344, 2350
MunI	CAATTG	2 cut(s)	1397, 2997
Mva1269I	GAATGC	2 cut(s)	845, 1642
MvaI	CCWGG	2 cut(s)	344, 2350
MvnI	CGCG	1 cut(s)	919
MwoI	GCNNNNNNNGC	9 cut(s)	94, 172, 536, 950, 1163, 1399, 1603, 2036, 3110
NciI	CCSGG	1 cut(s)	103
NlaIV	GGNNCC	1 cut(s)	603
NmuCI	GTSAC	4 cut(s)	54, 556, 1780, 2870
NsiI	ATGCAT	4 cut(s)	1094, 2047, 2101, 2203
NspI	RCATGY	6 cut(s)	1092, 1502, 1825, 1897, 2201, 2811
NspV	TTCGAA	1 cut(s)	110
PaeI	GCATGC	1 cut(s)	2201
PciI	ACATGT	1 cut(s)	1893
PciSI	GCTCTTC	1 cut(s)	934
PcsI	WCGNNNNNNNCGW	3 cut(s)	68, 1958, 2937
PctI	GAATGC	2 cut(s)	845, 1642
PdmI	GAANNNNTTC	1 cut(s)	2029
Pfl23II	CGTACG	1 cut(s)	3105
PflFI	GACNNNGTC	1 cut(s)	302
PflMI	CCANNNNNTGG	2 cut(s)	1126, 2221
PleI	GAGTC	6 cut(s)	769, 1058, 2626, 2654, 3007, 3125
PmaCI	CACGTG	1 cut(s)	1304
PmlI	CACGTG	1 cut(s)	1304
PpsI	GAGTC	6 cut(s)	769, 1058, 2626, 2654, 3007, 3125
Ppu21I	YACGTR	3 cut(s)	1304, 2702, 2932
PpuMI	RGGWCCY	1 cut(s)	157
PscI	ACATGT	1 cut(s)	1893
PshBI	ATTAAT	1 cut(s)	996
Psp1406I	AACGTT	1 cut(s)	1961
Psp5II	RGGWCCY	1 cut(s)	157
Psp6I	CCWGG	2 cut(s)	342, 2348
PspCI	CACGTG	1 cut(s)	1304
PspFI	CCCAGC	2 cut(s)	953, 1931
PspGI	CCWGG	2 cut(s)	342, 2348
PspLI	CGTACG	1 cut(s)	3105
PspN4I	GGNNCC	1 cut(s)	603
PspPI	GGNCC	2 cut(s)	157, 311
PspPPI	RGGWCCY	1 cut(s)	157
PstNI	CAGNNNCTG	1 cut(s)	2039
PsuI	RGATCY	5 cut(s)	91, 749, 1936, 2011, 2848
PsyI	GACNNNGTC	1 cut(s)	302
PvuII	CAGCTG	2 cut(s)	770, 2729
RsaI	GTAC	4 cut(s)	575, 687, 2367, 3107
RsaNI	GTAC	4 cut(s)	574, 686, 2366, 3106
RseI	CAYNNNNRTG	1 cut(s)	2508
SalI	GTCGAC	1 cut(s)	890
SapI	GCTCTTC	1 cut(s)	934
Sau96I	GGNCC	2 cut(s)	157, 311
SchI	GAGTC	6 cut(s)	769, 1058, 2627, 2654, 3007, 3125
ScrFI	CCNGG	3 cut(s)	103, 344, 2350
SduI	GDGCHC	2 cut(s)	716, 1014
SfaNI	GCATC	8 cut(s)	326, 469, 1534, 1652, 2032, 2210, 2591, 3002
SfcI	CTRYAG	2 cut(s)	1443, 2561
SfuI	TTCGAA	1 cut(s)	110
SinI	GGWCC	2 cut(s)	157, 311
SmiMI	CAYNNNNRTG	1 cut(s)	2508
SmlI	CTYRAG	4 cut(s)	374, 1253, 1484, 1514
SmoI	CTYRAG	4 cut(s)	374, 1253, 1484, 1514
SpeI	ACTAGT	1 cut(s)	1711
SphI	GCATGC	1 cut(s)	2201
SsiI	CCGC	4 cut(s)	482, 1360, 1847, 2844
SspI	AATATT	2 cut(s)	813, 2884
SspMI	CTAG	9 cut(s)	474, 1004, 1631, 1712, 1919, 2189, 2312, 2633, 2735
StyD4I	CCNGG	3 cut(s)	101, 342, 2348
StyI	CCWWGG	1 cut(s)	65
TaaI	ACNGT	9 cut(s)	54, 336, 1105, 1163, 1424, 2170, 2239, 2510, 2601
TaiI	ACGT	5 cut(s)	1306, 1964, 2152, 2704, 2934
TaqI	TCGA	7 cut(s)	71, 110, 116, 891, 1528, 2139, 2389
TatI	WGTACW	1 cut(s)	573
TscAI	CASTG	4 cut(s)	1785, 2592, 2606, 3154
TseFI	GTSAC	4 cut(s)	54, 556, 1780, 2870
Tsp45I	GTSAC	4 cut(s)	54, 556, 1780, 2870
TspDTI	ATGAA	8 cut(s)	381, 566, 738, 1223, 2310, 2775, 2940, 3066
TspGWI	ACGGA	1 cut(s)	2696
TspRI	CASTG	4 cut(s)	1785, 2592, 2606, 3154
Tth111I	GACNNNGTC	1 cut(s)	302
Van91I	CCANNNNNTGG	2 cut(s)	1126, 2221
VneI	GTGCAC	1 cut(s)	712
VpaK11BI	GGWCC	2 cut(s)	157, 311
VspI	ATTAAT	1 cut(s)	996
XbaI	TCTAGA	3 cut(s)	1918, 2188, 2632
XceI	RCATGY	6 cut(s)	1092, 1502, 1825, 1897, 2201, 2811
XcmI	CCANNNNNNNNNTGG	3 cut(s)	655, 1123, 2807
XmiI	GTMKAC	2 cut(s)	891, 2745
XmnI	GAANNNNTTC	1 cut(s)	2029
XspI	CTAG	9 cut(s)	474, 1004, 1631, 1712, 1919, 2189, 2312, 2633, 2735
Zsp2I	ATGCAT	4 cut(s)	1094, 2047, 2101, 2203

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.