Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0009274

Physical Location & Seq

Genomic Coordinates Reverse (-)

68057341 .. 68063164

Gene Structure 5824 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000035530

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3147 bp

ATGGAGTCGCAGCAGAGGAGAGGAGGATTGGTGTCGTTATCGCCGTCGCAGACGCCGCGGTCGAGCGACAAGTCGGCGAGAGATCTGCGATCGGCGGATTCGAATTCGACGAACAGGCATGAGAAAGAGAAGGGAGTCAATGTGCAGGTTCTTGTACGTTGCAGGCCTTTGAGTGAAGATGAAAGTAGGGTACATACGCCGGTTGTGATTTCTTGCAATGAGAATAGAAGGGAAGTGGCTGCAGTTCAGAATATTGCTAACAAGCAGATTGATAGAACCTTTGCCTTCGACAAGGTCTTTGGTCCAGCATCAGAACAGAGGGAATTGTATGATCAGGCTGTGTCTCCTATTGTGAACGAAGTACTTGAGGGGTATAACTGCACTATCTTTGCGTATGGTCAGACAGGGACGGGAAAGACGTACACAATGGAAGGAGGAGCAAGAAAGAAGAATGGGGAGTTTCCAAGTGATGCTGGTGTTATCCCAAGAGCTGTGAAACAAATTTTTGACATATTAGAAGCTCAGGTTGCTGAGTATAGCATGAAAGTCACTTTTTTAGAGCTGTATAATGAGGAGATAACTGATCTGTTGGCTTTAGAGGAGAGCACAAAGTTTATAGATGACAAAACTAAGAAACCGATTGCTCTCATGGAAGATGGAAAAGGTGGTGTTTTTGTGAGAGGCTTGGAAGAAGAGATAGTGTGCACAGCAAATGAAATTTATAAAATCTTGGAGAAAGGATCTGCAAAAAGGCGTACAGCTGAGACTCTTCTCAACAAGCAAAGTAGTCGTTCACACTCTATATTTTCAATCACAATCCACATTAAGGAATGTACTCCAGAGGGTGAAGAAATGATCAAGTGTGGGAAGCTGAATCTTGTTGACCTTGCTGGTTCAGAGAACATTTCTCGCTCTGGTGCAAGAGATGGCAGAGCAAGGGAAGCTGGAGAGATAAATAAAAGCTTGCTTACTCTTGGTCGTGTCATAAATGCTCTAGTTGAGCACTCTGGTCATATTCCATATAGGGATAGTAAACTAACAAGATTATTGAGAGACTCCTTAGGAGGGAAAACAAAGACATGCATAATAGCTACCATATCACCCTCCATCCATTGTTTGGAAGAAACACTCAACACCTTGGACTATGCACACCGTGCCAAGAATATAAAGAATAAACCAGAGGTTAATCAAAAGATGATGAAATCAGCTTTGATCAAGGATTTATATACTGAAATTGATCGTCTCAAGCAAGAGGTATATGCTGCAAGAGAGAAGAATGGAATCTATATACCACGGGATCGGTATCTTCATGAAGAAGCCGAGAAGAAGGCAATGGCAGAAAAGATAGAGCGCATGGAACTTGAATCTGAATCCAAAGACAAGGTATCAATGGAGCTTCAGGAACTTTACAATTCTCAGCAACTTTTGACTGCAGAATTGTCTGATAAACTTGAAAAAACTGAGAAAAAGCTCGAGGAAACTGAACATTCATTGGATGACCTTGAGGAAAAACACCGGCAGGCAAATGCGACCATTAAAGAGAAGGAATTTCTGATATCAAATCTCCTCAAATCTGAGAAATCACTTGTTGAGCGTGCATTTGAGCTTCGAGCAGAGCTTGAGAATGCTGCATCAGATGTGTCCAATTTATTTTCCAAAATTGAGCGCAAGGATAAAATTGAAGATGGGAATCGGATACTGGTCCAGAAATTCCAGTCACAGCTAACTCAACAGCTTGAAATCTTACATAAGACAGTGGCAGTTGCAGTGACACAACAGGAGCAGCAGTTGAAGGATATGGAAGAAGATATGCAGTCATTTGTATCCACAAAGGCAGAGGCTACCGAAGAACTTCGAGGACGACTAGGAAAGCTGAAAAAAATGTATGGTTCTGGTATCAAGACACTGGATGGTATAGCGGTTGACCTTGAAGGAAATTCTCAGTCAACTTTTTGTCATCTAAATTCTGAAGTTTCTAACCACTCTTCTGCAGTGGAGGATCTCTTCAAAGGAATTGCTTCAGATGCTGATGAATTACTTAATGATCTTCAAAGTAATCTTCACAAGCAAGAGGAGAAGCTAAGCGCACATGCACAACAACAGCGTGAGGCTCATGCCAGAGCAGTGGAAATGGCACGGTCAGTTTCTAAAGTTACTGTGGACTTCTTCAAGACTCTAGACGTGCATGCATCCAGTTTAAGCCAAATTGTGGAAGAAGCACAAACTGTCAATGATAAGAAACTGTCTGAGCTTGAAGATAAGTTTGAGGAGTGTGCTGCTAATGAAGAAAGGCAGTTGCTAGAAAAAGTGGCAGAGCTGCTGGCAAGTTCAAATGCTAGGAAGAAAAGACTGGTCCAAACAGCAGTTACTGACCTTCGGGAGAGTGCAACTAGCAGAACCAACAAGCTACAGCAAGAAATGTCAACCATGCAAGATTCTACTTCTTCTATCAAAGCAAAATGGACAATTCACATGGAAAAGACAGAATCTCATTACCTGGAAGATACATCTGCTGTGGAATGTGGAAAGAAAGACATGGAGGAGGTTCTTCAGAATTGTTTGAACAAGGCAAAAATGGGTGAACAACAATGGAAGAATGCTCAAGAGTCCTTGCTAAGTCTAGAAAAGAAAAATGTTGCTTCTGTGGACTCCATTGTTAGGAGGGGAACGGAAGCCAATCAAGTTCTACGGGAAAGGTTTTCCTCTGCTGTTTCGGCTGCACTTGAAGATGTAGATGTTGCGGACAAAGATCTCCTTTCTTCTATTGACCATTCATTACAACTTGACCATGATGCTTGTGGAAACCTAAACTCAACTATCGGTCCCTGTTGCGGGGATTTGAGGGAACTTAAGGGAGGCCACTACCACAATATTGTCGAAATCACTGAGAATGCAGGAAAATTTCTACTGGAGGAATATGTGGTGGATGAACCATCATGTTCCACACCGCGAAAGAGGTCATTCAATCTTCCTAGCATTGCATCCATCGAAGAACTTCGAACTCCTGCTTTTGAGGACTTGTTGAGATCATTCTGGGATGGAAGATCGGCAAAGCAGGCAAATGGAGACGCAAAACATCTTGCAGGGGCTTATGAGGGTGCACAATCCTTAAGAGATTCCAGACTTCCTCTCACTGCTATTAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000281 GO:0000902 GO:0000910 GO:0000911 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005819 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005886 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0008150 GO:0008574 GO:0009653 GO:0009826 GO:0009987 GO:0015630 GO:0016020 GO:0016043 GO:0016049 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0030865 GO:0031122 GO:0032502 GO:0032506 GO:0032989 GO:0032991 GO:0040007 GO:0042623 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043622 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0048589 GO:0048856 GO:0048869 GO:0051301 GO:0060560 GO:0061640 GO:0071840 GO:0071944 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:1902410 GO:1902850 GO:1903047 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

1049

Amino Acids

117.48

Weight (kDa)

5.57

Isoelectric Point (pI)

52.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	47 - 197	4.3e-28	Microtubule binding
Kinesin	PF00225	53 - 389	2.5e-116	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0009274)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28620 AT2G28620 AT2G28620 AT3G45850 AT3G45850
fragaria_vesca	FvH4_3g34440 FvH4_3g34440
malus_domestica	MD03G1105700.v1.1 MD11G1118200.v1.1
prunus_persica	Prupe.6G088500_v2.0.a1
pyrus_communis	pycom03g08490 pycom11g09910
rosa_chinensis	RchiOBHm_Chr5g0062081
rosa_laevigata	RLG00000035530
rosa_multiflora	Rmu_sc0002296.1_g000013
rosa_roxburghii	Rroxscaffold_1G00018630
rosa_rugosa	Rorug05G0345900 Rorug05G0345900
rosa_samantha	Rh5AG407500 Rh5BG420800 Rh5DG435900
rosa_wichuraiana	Rw5G038370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	723
AasI	GACNNNNNNGTC	1 cut(s)	58
Acc36I	ACCTGC	1 cut(s)	136
AccB7I	CCANNNNNTGG	2 cut(s)	1117, 2209
AccII	CGCG	2 cut(s)	58, 2950
AciI	CCGC	7 cut(s)	56, 58, 95, 1919, 2741, 2832, 2948
AclWI	GGATC	3 cut(s)	748, 1305, 2007
AcsI	RAATTY	8 cut(s)	103, 501, 717, 1547, 1709, 1936, 1963, 2900
AcuI	CTGAAG	4 cut(s)	1382, 1989, 2004, 2534
AcyI	GRCGYC	1 cut(s)	53
AdeI	CACNNNGTG	1 cut(s)	1154
AfaI	GTAC	6 cut(s)	156, 192, 363, 422, 757, 835
AfiI	CCNNNNNNNGG	7 cut(s)	826, 1065, 1117, 2209, 2658, 2831, 2832
AflII	CTTAAG	2 cut(s)	2849, 3109
AjiI	CACGTC	1 cut(s)	2182
AjnI	CCWGG	1 cut(s)	2496
Alw21I	GWGCWC	4 cut(s)	608, 707, 1005, 3103
Alw26I	GTCTC	5 cut(s)	348, 758, 1047, 1247, 3060
Alw44I	GTGCAC	2 cut(s)	703, 3099
AlwI	GGATC	3 cut(s)	748, 1305, 2007
AlwNI	CAGNNNCTG	2 cut(s)	2027, 2369
Ama87I	CYCGRG	1 cut(s)	1472
AoxI	GGCC	2 cut(s)	164, 2857
ApaLI	GTGCAC	2 cut(s)	703, 3099
ApeKI	GCWGC	8 cut(s)	10, 239, 1262, 1628, 1783, 2276, 2317, 2717
ApoI	RAATTY	8 cut(s)	103, 501, 717, 1547, 1709, 1936, 1963, 2900
ArsI	GACNNNNNNTTYG	2 cut(s)	281, 313
Asp700I	GAANNNNTTC	3 cut(s)	1851, 2017, 2994
AspLEI	GCGC	3 cut(s)	1353, 1668, 2087
AspS9I	GGNCC	4 cut(s)	302, 1702, 2353, 2822
AsuHPI	GGTGA	3 cut(s)	857, 1092, 2591
AsuII	TTCGAA	2 cut(s)	101, 2998
AvaI	CYCGRG	1 cut(s)	1472
AvaII	GGWCC	4 cut(s)	302, 1702, 2353, 2822
AxyI	CCTNAGG	1 cut(s)	1060
BaeGI	GKGCMC	2 cut(s)	707, 3103
Bbv12I	GWGCWC	4 cut(s)	608, 707, 1005, 3103
BbvI	GCAGC	8 cut(s)	22, 226, 1249, 1615, 1795, 2263, 2304, 2704
BccI	CCATC	8 cut(s)	650, 920, 1115, 1679, 1904, 2941, 2993, 3032
BceAI	ACGGC	1 cut(s)	28
BcgI	CGANNNNNNTGC	4 cut(s)	67, 101, 770, 804
BciT130I	CCWGG	1 cut(s)	2498
BciVI	GTATCC	2 cut(s)	1689, 1834
BclI	TGATCA	3 cut(s)	331, 855, 1212
BcoDI	GTCTC	5 cut(s)	348, 758, 1047, 1247, 3060
BfaI	CTAG	8 cut(s)	995, 1865, 2177, 2300, 2337, 2391, 2621, 2973
BfmI	CTRYAG	4 cut(s)	240, 1431, 1989, 2408
BfrI	CTTAAG	2 cut(s)	2849, 3109
BfuAI	ACCTGC	1 cut(s)	136
BfuI	GTATCC	2 cut(s)	1689, 1834
BglII	AGATCT	2 cut(s)	82, 2749
BisI	GCNGC	9 cut(s)	11, 56, 240, 1263, 1629, 1784, 2277, 2318, 2718
BlpI	GCTNAGC	1 cut(s)	2081
BlsI	GCNGC	9 cut(s)	12, 57, 241, 1264, 1630, 1785, 2278, 2319, 2719
BmcAI	AGTACT	1 cut(s)	363
Bme1390I	CCNGG	1 cut(s)	2498
Bme18I	GGWCC	4 cut(s)	302, 1702, 2353, 2822
BmeT110I	CYCGRG	1 cut(s)	1472
BmgBI	CACGTC	1 cut(s)	2182
BmgT120I	GGNCC	4 cut(s)	302, 1702, 2353, 2822
BmiI	GGNNCC	1 cut(s)	2824
BmrFI	CCNGG	1 cut(s)	2498
BmsI	GCATC	7 cut(s)	317, 460, 1640, 2014, 2198, 2782, 2990
BpmI	CTGGAG	3 cut(s)	822, 966, 2930
Bpu10I	CCTNAGC	1 cut(s)	522
Bpu1102I	GCTNAGC	1 cut(s)	2081
Bpu14I	TTCGAA	2 cut(s)	101, 2998
BpuEI	CTTGAG	5 cut(s)	386, 1229, 1523, 1640, 2586
BsaBI	GATNNNNATC	2 cut(s)	1302, 1689
BsaHI	GRCGYC	1 cut(s)	53
BsaJI	CCNNGG	3 cut(s)	56, 1137, 1292
BsaXI	ACNNNNNCTCC	6 cut(s)	15, 45, 126, 156, 1772, 1802
Bsc4I	CCNNNNNNNGG	7 cut(s)	826, 1065, 1117, 2209, 2658, 2831, 2832
Bse118I	RCCGGY	2 cut(s)	199, 1515
Bse1I	ACTGG	6 cut(s)	1704, 1714, 1911, 2193, 2355, 2913
Bse21I	CCTNAGG	1 cut(s)	1060
Bse3DI	GCAATG	3 cut(s)	223, 1338, 2976
Bse8I	GATNNNNATC	2 cut(s)	1302, 1689
BseBI	CCWGG	1 cut(s)	2498
BseDI	CCNNGG	3 cut(s)	56, 1137, 1292
BseGI	GGATG	7 cut(s)	1107, 1501, 1915, 2189, 2932, 2981, 3043
BseJI	GATNNNNATC	2 cut(s)	1302, 1689
BseLI	CCNNNNNNNGG	7 cut(s)	826, 1065, 1117, 2209, 2658, 2831, 2832
BseMI	GCAATG	3 cut(s)	223, 1338, 2976
BseMII	CTCAG	9 cut(s)	522, 536, 753, 1430, 1452, 1566, 1955, 2238, 2877
BseNI	ACTGG	6 cut(s)	1704, 1714, 1911, 2193, 2355, 2913
BseRI	GAGGAG	9 cut(s)	31, 36, 450, 587, 614, 1556, 2087, 2282, 2555
BseSI	GKGCMC	2 cut(s)	707, 3103
BseXI	GCAGC	8 cut(s)	22, 226, 1249, 1615, 1795, 2263, 2304, 2704
BsgI	GTGCAG	3 cut(s)	164, 364, 2703
Bsh1236I	CGCG	2 cut(s)	58, 2950
Bsh1285I	CGRYCG	2 cut(s)	62, 92
BshFI	GGCC	2 cut(s)	166, 2859
BsiEI	CGRYCG	2 cut(s)	62, 92
BsiHKAI	GWGCWC	4 cut(s)	608, 707, 1005, 3103
BsiHKCI	CYCGRG	1 cut(s)	1472
BsiSI	CCGG	2 cut(s)	200, 1516
BslFI	GGGAC	2 cut(s)	421, 2808
BslI	CCNNNNNNNGG	7 cut(s)	826, 1065, 1117, 2209, 2658, 2831, 2832
BsmAI	GTCTC	5 cut(s)	348, 758, 1047, 1247, 3060
BsmBI	CGTCTC	2 cut(s)	1247, 3060
BsmFI	GGGAC	2 cut(s)	421, 2808
BsmI	GAATGC	3 cut(s)	1630, 2602, 2896
BsnI	GGCC	2 cut(s)	166, 2859
BsoBI	CYCGRG	1 cut(s)	1472
Bsp119I	TTCGAA	2 cut(s)	101, 2998
Bsp1286I	GDGCHC	4 cut(s)	608, 707, 1005, 3103
Bsp1720I	GCTNAGC	1 cut(s)	2081
BspACI	CCGC	7 cut(s)	56, 58, 95, 1919, 2741, 2832, 2948
BspANI	GGCC	2 cut(s)	166, 2859
BspCNI	CTCAG	9 cut(s)	523, 535, 754, 1429, 1453, 1567, 1954, 2239, 2878
BspFNI	CGCG	2 cut(s)	58, 2950
BspHI	TCATGA	1 cut(s)	1309
BspLI	GGNNCC	1 cut(s)	2824
BspMAI	CTGCAG	3 cut(s)	244, 1435, 1993
BspMI	ACCTGC	1 cut(s)	136
BspPI	GGATC	3 cut(s)	748, 1305, 2007
BspT104I	TTCGAA	2 cut(s)	101, 2998
BspTI	CTTAAG	2 cut(s)	2849, 3109
BsrDI	GCAATG	3 cut(s)	223, 1338, 2976
BsrFI	RCCGGY	2 cut(s)	199, 1515
BsrI	ACTGG	6 cut(s)	1704, 1714, 1911, 2193, 2355, 2913
BssAI	RCCGGY	2 cut(s)	199, 1515
BssECI	CCNNGG	3 cut(s)	56, 1137, 1292
BssNI	GRCGYC	1 cut(s)	53
BssT1I	CCWWGG	1 cut(s)	1137
Bst2UI	CCWGG	1 cut(s)	2498
Bst4CI	ACNGT	6 cut(s)	1154, 1756, 2139, 2158, 2227, 2244
Bst6I	CTCTTC	4 cut(s)	687, 774, 1990, 2009
BstACI	GRCGYC	1 cut(s)	53
BstAFI	CTTAAG	2 cut(s)	2849, 3109
BstAPI	GCANNNNNTGC	1 cut(s)	1154
BstBI	TTCGAA	2 cut(s)	101, 2998
BstC8I	GCNNGC	7 cut(s)	164, 965, 1521, 1596, 2187, 2322, 3057
BstDSI	CCRYGG	2 cut(s)	56, 1292
BstF5I	GGATG	7 cut(s)	1107, 1501, 1915, 2189, 2932, 2981, 3043
BstFNI	CGCG	2 cut(s)	58, 2950
BstHHI	GCGC	3 cut(s)	1353, 1668, 2087
BstMAI	GTCTC	5 cut(s)	348, 758, 1047, 1247, 3060
BstMCI	CGRYCG	2 cut(s)	62, 92
BstMWI	GCNNNNNNNGC	7 cut(s)	55, 527, 941, 1154, 2024, 2714, 3056
BstNI	CCWGG	1 cut(s)	2498
BstNSI	RCATGY	3 cut(s)	1083, 2093, 2189
BstSCI	CCNGG	1 cut(s)	2496
BstSFI	CTRYAG	4 cut(s)	240, 1431, 1989, 2408
BstSLI	GKGCMC	2 cut(s)	707, 3103
BstUI	CGCG	2 cut(s)	58, 2950
BstV1I	GCAGC	8 cut(s)	22, 226, 1249, 1615, 1795, 2263, 2304, 2704
BstX2I	RGATCY	4 cut(s)	82, 740, 1999, 2749
BstXI	CCANNNNNNTGG	1 cut(s)	2125
BstYI	RGATCY	4 cut(s)	82, 740, 1999, 2749
Bsu36I	CCTNAGG	1 cut(s)	1060
BsuI	GTATCC	2 cut(s)	1689, 1834
BsuRI	GGCC	2 cut(s)	166, 2859
BtgI	CCRYGG	2 cut(s)	56, 1292
BtrI	CACGTC	1 cut(s)	2182
BtsCI	GGATG	7 cut(s)	1107, 1501, 1915, 2189, 2932, 2981, 3043
BtsI	GCAGTG	4 cut(s)	1773, 1998, 2130, 3132
BtsIMutI	CAGTG	7 cut(s)	1761, 1773, 1904, 1998, 2130, 2883, 3132
BveI	ACCTGC	1 cut(s)	136
Cac8I	GCNNGC	7 cut(s)	164, 965, 1521, 1596, 2187, 2322, 3057
CaiI	CAGNNNCTG	2 cut(s)	2027, 2369
CciI	TCATGA	1 cut(s)	1309
CfoI	GCGC	3 cut(s)	1353, 1668, 2087
Cfr10I	RCCGGY	2 cut(s)	199, 1515
Cfr13I	GGNCC	4 cut(s)	302, 1702, 2353, 2822
Cfr42I	CCGCGG	1 cut(s)	59
CseI	GACGC	2 cut(s)	61, 3077
Csp6I	GTAC	6 cut(s)	155, 191, 362, 421, 756, 834
CviQI	GTAC	6 cut(s)	155, 191, 362, 421, 756, 834
DraIII	CACNNNGTG	1 cut(s)	1154
DrdI	GACNNNNNNGTC	1 cut(s)	58
DseDI	GACNNNNNNGTC	1 cut(s)	58
Eam1104I	CTCTTC	4 cut(s)	687, 774, 1990, 2009
EarI	CTCTTC	4 cut(s)	687, 774, 1990, 2009
EciI	GGCGGA	1 cut(s)	110
Eco130I	CCWWGG	1 cut(s)	1137
Eco147I	AGGCCT	1 cut(s)	166
Eco32I	GATATC	1 cut(s)	1557
Eco47I	GGWCC	4 cut(s)	302, 1702, 2353, 2822
Eco57I	CTGAAG	4 cut(s)	1382, 1989, 2004, 2534
Eco81I	CCTNAGG	1 cut(s)	1060
Eco88I	CYCGRG	1 cut(s)	1472
EcoRI	GAATTC	1 cut(s)	103
EcoRII	CCWGG	1 cut(s)	2496
EcoRV	GATATC	1 cut(s)	1557
EcoT14I	CCWWGG	1 cut(s)	1137
EcoT22I	ATGCAT	2 cut(s)	1085, 2191
ErhI	CCWWGG	1 cut(s)	1137
Esp3I	CGTCTC	2 cut(s)	1247, 3060
FalI	AAGNNNNNCTT	2 cut(s)	2739, 2771
FaqI	GGGAC	2 cut(s)	421, 2808
FauI	CCCGC	1 cut(s)	2825
FbaI	TGATCA	3 cut(s)	331, 855, 1212
Fnu4HI	GCNGC	9 cut(s)	11, 56, 240, 1263, 1629, 1784, 2277, 2318, 2718
FokI	GGATG	7 cut(s)	1094, 1508, 1922, 2176, 2939, 2968, 3050
Fsp4HI	GCNGC	9 cut(s)	11, 56, 240, 1263, 1629, 1784, 2277, 2318, 2718
FspBI	CTAG	8 cut(s)	995, 1865, 2177, 2300, 2337, 2391, 2621, 2973
GlaI	GCGC	3 cut(s)	1352, 1667, 2086
GluI	GCNGC	9 cut(s)	11, 56, 240, 1263, 1629, 1784, 2277, 2318, 2718
GsuI	CTGGAG	3 cut(s)	822, 966, 2930
HaeIII	GGCC	2 cut(s)	166, 2859
HapII	CCGG	2 cut(s)	200, 1516
HgaI	GACGC	2 cut(s)	61, 3077
HhaI	GCGC	3 cut(s)	1353, 1668, 2087
Hin1I	GRCGYC	1 cut(s)	53
Hin6I	GCGC	3 cut(s)	1351, 1666, 2085
HinP1I	GCGC	3 cut(s)	1351, 1666, 2085
HincII	GTYRAC	4 cut(s)	883, 1924, 1947, 2424
HindII	GTYRAC	4 cut(s)	883, 1924, 1947, 2424
HindIII	AAGCTT	1 cut(s)	961
HpaII	CCGG	2 cut(s)	200, 1516
HphI	GGTGA	3 cut(s)	857, 1092, 2591
Hpy99I	CGWCG	2 cut(s)	49, 112
HpyAV	CCTTC	9 cut(s)	124, 222, 295, 425, 1321, 1537, 1786, 1925, 2384
HpyCH4III	ACNGT	6 cut(s)	1154, 1756, 2139, 2158, 2227, 2244
HpyCH4IV	ACGT	3 cut(s)	157, 419, 2181
HpyF10VI	GCNNNNNNNGC	7 cut(s)	55, 527, 941, 1154, 2024, 2714, 3056
HpySE526I	ACGT	3 cut(s)	157, 419, 2181
Hsp92I	GRCGYC	1 cut(s)	53
HspAI	GCGC	3 cut(s)	1351, 1666, 2085
Ksp22I	TGATCA	3 cut(s)	331, 855, 1212
KspI	CCGCGG	1 cut(s)	59
LmnI	GCTCC	3 cut(s)	437, 1393, 1780
Lsp1109I	GCAGC	8 cut(s)	22, 226, 1249, 1615, 1795, 2263, 2304, 2704
LweI	GCATC	7 cut(s)	317, 460, 1640, 2014, 2198, 2782, 2990
MaeI	CTAG	8 cut(s)	995, 1865, 2177, 2300, 2337, 2391, 2621, 2973
MaeII	ACGT	3 cut(s)	157, 419, 2181
MaeIII	GTNAC	5 cut(s)	547, 1716, 1768, 2152, 2365
MflI	RGATCY	4 cut(s)	82, 740, 1999, 2749
MhlI	GDGCHC	4 cut(s)	608, 707, 1005, 3103
MlyI	GAGTC	7 cut(s)	14, 144, 760, 1049, 2167, 2615, 2642
Mph1103I	ATGCAT	2 cut(s)	1085, 2191
MroXI	GAANNNNTTC	3 cut(s)	1851, 2017, 2994
MseI	TTAA	8 cut(s)	825, 1185, 1536, 2040, 2198, 2850, 3110, 3141
MspA1I	CMGCKG	2 cut(s)	58, 761
MspCI	CTTAAG	2 cut(s)	2849, 3109
MspI	CCGG	2 cut(s)	200, 1516
MspR9I	CCNGG	1 cut(s)	2498
Mva1269I	GAATGC	3 cut(s)	1630, 2602, 2896
MvaI	CCWGG	1 cut(s)	2498
MvnI	CGCG	2 cut(s)	58, 2950
MwoI	GCNNNNNNNGC	7 cut(s)	55, 527, 941, 1154, 2024, 2714, 3056
NlaIV	GGNNCC	1 cut(s)	2824
NmeAIII	GCCGAG	1 cut(s)	1345
NmuCI	GTSAC	3 cut(s)	547, 1716, 1768
NsiI	ATGCAT	2 cut(s)	1085, 2191
NspI	RCATGY	3 cut(s)	1083, 2093, 2189
NspV	TTCGAA	2 cut(s)	101, 2998
PaeI	GCATGC	1 cut(s)	2189
PaeR7I	CTCGAG	1 cut(s)	1472
PagI	TCATGA	1 cut(s)	1309
PceI	AGGCCT	1 cut(s)	166
PcsI	WCGNNNNNNNCGW	5 cut(s)	41, 59, 98, 107, 416
PctI	GAATGC	3 cut(s)	1630, 2602, 2896
PdmI	GAANNNNTTC	3 cut(s)	1851, 2017, 2994
PfeI	GAWTC	9 cut(s)	98, 874, 1281, 1364, 1370, 1690, 2435, 2486, 3116
PflFI	GACNNNGTC	1 cut(s)	293
PflMI	CCANNNNNTGG	2 cut(s)	1117, 2209
PkrI	GCNGC	9 cut(s)	12, 57, 241, 1264, 1630, 1785, 2278, 2319, 2719
Ple19I	CGATCG	1 cut(s)	92
PleI	GAGTC	7 cut(s)	13, 143, 760, 1049, 2167, 2614, 2642
PpsI	GAGTC	7 cut(s)	13, 143, 760, 1049, 2167, 2614, 2642
PsiI	TTATAA	1 cut(s)	723
Psp6I	CCWGG	1 cut(s)	2496
PspGI	CCWGG	1 cut(s)	2496
PspN4I	GGNNCC	1 cut(s)	2824
PspPI	GGNCC	4 cut(s)	302, 1702, 2353, 2822
PspXI	VCTCGAGB	1 cut(s)	1472
PstI	CTGCAG	3 cut(s)	244, 1435, 1993
PstNI	CAGNNNCTG	2 cut(s)	2027, 2369
PsuI	RGATCY	4 cut(s)	82, 740, 1999, 2749
PsyI	GACNNNGTC	1 cut(s)	293
PvuI	CGATCG	1 cut(s)	92
PvuII	CAGCTG	1 cut(s)	761
RsaI	GTAC	6 cut(s)	156, 192, 363, 422, 757, 835
RsaNI	GTAC	6 cut(s)	155, 191, 362, 421, 756, 834
SacII	CCGCGG	1 cut(s)	59
SaqAI	TTAA	8 cut(s)	825, 1185, 1536, 2040, 2198, 2850, 3110, 3141
SatI	GCNGC	9 cut(s)	11, 56, 240, 1263, 1629, 1784, 2277, 2318, 2718
Sau96I	GGNCC	4 cut(s)	302, 1702, 2353, 2822
ScaI	AGTACT	1 cut(s)	363
SchI	GAGTC	7 cut(s)	14, 144, 760, 1049, 2167, 2615, 2642
ScrFI	CCNGG	1 cut(s)	2498
SduI	GDGCHC	4 cut(s)	608, 707, 1005, 3103
SfaNI	GCATC	7 cut(s)	317, 460, 1640, 2014, 2198, 2782, 2990
SfcI	CTRYAG	4 cut(s)	240, 1431, 1989, 2408
Sfr274I	CTCGAG	1 cut(s)	1472
Sfr303I	CCGCGG	1 cut(s)	59
SfuI	TTCGAA	2 cut(s)	101, 2998
SgrBI	CCGCGG	1 cut(s)	59
SinI	GGWCC	4 cut(s)	302, 1702, 2353, 2822
SlaI	CTCGAG	1 cut(s)	1472
SmlI	CTYRAG	8 cut(s)	365, 1244, 1472, 1502, 1619, 2601, 2849, 3109
SmoI	CTYRAG	8 cut(s)	365, 1244, 1472, 1502, 1619, 2601, 2849, 3109
SphI	GCATGC	1 cut(s)	2189
SseBI	AGGCCT	1 cut(s)	166
SsiI	CCGC	7 cut(s)	56, 58, 95, 1919, 2741, 2832, 2948
SspI	AATATT	2 cut(s)	253, 2872
SspMI	CTAG	8 cut(s)	995, 1865, 2177, 2300, 2337, 2391, 2621, 2973
StuI	AGGCCT	1 cut(s)	166
StyD4I	CCNGG	1 cut(s)	2496
StyI	CCWWGG	1 cut(s)	1137
TaaI	ACNGT	6 cut(s)	1154, 1756, 2139, 2158, 2227, 2244
TaiI	ACGT	3 cut(s)	160, 422, 2184
TaqII	GACCGA	1 cut(s)	2810
TatI	WGTACW	2 cut(s)	361, 833
TauI	GCSGC	1 cut(s)	58
TfiI	GAWTC	9 cut(s)	98, 874, 1281, 1364, 1370, 1690, 2435, 2486, 3116
Tru1I	TTAA	8 cut(s)	825, 1185, 1536, 2040, 2198, 2850, 3110, 3141
Tru9I	TTAA	8 cut(s)	825, 1185, 1536, 2040, 2198, 2850, 3110, 3141
TscAI	CASTG	7 cut(s)	1761, 1773, 1911, 1998, 2130, 2890, 3139
TseFI	GTSAC	3 cut(s)	547, 1716, 1768
TseI	GCWGC	8 cut(s)	10, 239, 1262, 1628, 1783, 2276, 2317, 2717
Tsp45I	GTSAC	3 cut(s)	547, 1716, 1768
TspGWI	ACGGA	1 cut(s)	2684
TspRI	CASTG	7 cut(s)	1761, 1773, 1911, 1998, 2130, 2890, 3139
Tth111I	GACNNNGTC	1 cut(s)	293
Van91I	CCANNNNNTGG	2 cut(s)	1117, 2209
Vha464I	CTTAAG	2 cut(s)	2849, 3109
VneI	GTGCAC	2 cut(s)	703, 3099
VpaK11BI	GGWCC	4 cut(s)	302, 1702, 2353, 2822
XapI	RAATTY	8 cut(s)	103, 501, 717, 1547, 1709, 1936, 1963, 2900
XbaI	TCTAGA	2 cut(s)	2176, 2620
XceI	RCATGY	3 cut(s)	1083, 2093, 2189
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1114, 2795
XhoI	CTCGAG	1 cut(s)	1472
XmnI	GAANNNNTTC	3 cut(s)	1851, 2017, 2994
XspI	CTAG	8 cut(s)	995, 1865, 2177, 2300, 2337, 2391, 2621, 2973
ZrmI	AGTACT	1 cut(s)	363
Zsp2I	ATGCAT	2 cut(s)	1085, 2191

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.