Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0009274

Physical Location & Seq

Genomic Coordinates Reverse (-)

68053020 .. 68058542

Gene Structure 5523 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG420800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3153 bp

ATGGAGTCGCAGCAGAGAAGAGGAGGAGGAGGATTGGTGTCGCTATCGCCGTCGCAGACGCCGCGGTCGAGCGACAAGTCGGCGAGAGATCTGCGATCGGCGGATTCGAATTCGACGAACAGGCATGAGAAAGAGAAGGGCGTCAATGTGCAGGTTCTTGTGCGGTGCAGGCCTCTGAGTGAAGATGAAAGTAGGGTACATACGCCGGTTGTGATTTCTTGCAATGAGAATAGAAGGGAAGTGGCTGCAGTTCAGAGTATTGCTAACAAGCAGATTGATAGAACCTTTGCCTTCGATAAGGTCTTTGGTCCAGCGTCAGAACAGAAGGAATTGTATGATCAGGCTGTGTCTCCTATTGTGAACGAAGTACTTGAGGGGTATAACTGCACTATCTTTGCGTATGGTCAGACAGGGACGGGAAAGACGTACACAATGGAAGGAGGAGCAAGAAAGAAGAATGGGGAGTTTCCAAGTGATGCTGGTGTTATCCCAAGAGCTGTGAAACAAATTTTTGACATATTAGAAGCTCAGGTTGCTGAGTATAGCATGAAAGTCACTTTTTTAGAGCTGTATAATGAGGAGATAACTGATCTGTTGGCTTTAGAGGAGAGCACAAAGTTTATAGATGACAAAACTAAGAAACCGATAGCTCTCATGGAAGATGGAAAAGGCGGTGTTTTTGTGAGAGGCTTGGAAGAAGAGATAGTGTGCACAGCAAATGAAATTTATAAAATCTTGGAGAAAGGATCTGCAAAAAGGCGTACAGCTGAGACTCTTCTCAACAAGCAAAGTAGTCGTTCACACTCTATATTTTCAATCACAATCCACATCAAGGAATGTACTCCAGAGGGTGAAGAAATGATCAAGTGTGGGAAGCTGAATCTTGTTGACCTTGCTGGTTCAGAGAACATTTCTCGCTCTGGTGCAAGAGATGGCAGAGCAAGGGAAGCTGGAGAGATAAATAAAAGCTTGCTTACTCTTGGTCGTGTCATAAATGCTCTAGTTGAGCACTCTGGTCATATTCCATATAGGGATAGTAAACTAACAAGATTATTGAGGGACTCCTTAGGAGGGAAAACCAAGACATGCATAATAGCTACCATATCACCCTCCATCCATTGTTTGGAAGAAACACTCAGCACCTTGGACTACGCACACCGTGCCAAGAATATAAAGAATAAACCAGAGGTTAATCAAAAGATGATGAAATCAGCTTTGATCAAGGATTTATATACTGAAATTGATCGTCTCAAGCAAGAGGTATATGCTGCAAGAGAGAAGAATGGTATCTACATACCACGGGATCGGTATCTTCATGAAGAAGCCGAGAAGAAGGCAATGGCGGAAAAGATAGAGCGCATGGAACTTGAATCTGAATCCAAAGACAAGGTATCATTGGAGCTTCAGGAACTTTACAATTCTCAGCAACTTTTGACTGCAGAATTGACTGATAAACTTGAAAAAACTGAGAAAAAGCTTGAGGAAACTGAACATTCATTGGATGATCTCGAGGAAAAACATCGGCAGGCAAATGCGACCATTAGAGAGAAGGAATTTCTGATATCAAATCTCCTCAAATCGGAGAAATCACTTGTTGAGCGTGCATTTGAGCTTCGAGCAGAGCTAGAGAATGCTGCATCAGATGTGTCCAATTTATTTTCCAAAATTGAGCGCAAGGATAAAATTGAAGATGGGAATCGGATACTGGTCCAGAAATTCCAGTCACAGCTAACTCAACAGCTTGAAATCTTGCATAAGACAGTGGCAGTTGCAGTGACACAACAGGAGCAGCAGTTGAAGGATATGGAAGAAGATATGCAGTCATTTGTATCCACAAAGGCAGAGGCTACCGAAGAACTTCGAGGAAGACTAGGAAAGCTGAAAAAAATGTATGGTTCTGGTATCAAGACACTGGATGGTATAGCGGTGGACCTTGAAGCAAATTCTCAGTCAACTTTTTGTCATCTAAATTCTGAAGTTTCTAACCACTCTTCTGCAGTGGAGGATCTCTTCAAAGGAATTGCTTCAGAAGCTGATGAATTACTTAATGATCTTCAAAGTAATCTTCACAAGCAAGAGGAGAAGCTAAGCGCACATGCACAACAACAGCGTGAGGCTCATGCCAGAGCAGTGGAAATGGCACGGTCAGTTTCTAAAGTTACTGTGGACTTCTTCAAGACTCTAGACATGCATGCATCCAGTTTAAGCCAAATTGTGGAAGAAGCACATACTGTCAATGATAAGAAACTGTCTGAGCTTGAAGAAAAGTTTGAGGAGTGTGCTGCTAATGAAGAAAGGCAGTTGCTAGAAAAAGTGGCAGAGCTGCTGGCAAGTTCAAATGCTAGGAAGAAAAGACTGGTCCAAACAGCAGTTAATGACCTTCGGGAGAGTGCAACTAGCAGAACCAACAAGCTACAGCAAGAAATGTCAACCATGCAAGATTCTACTTCTTCTATCAAAGCAAAATGGACAATTCACATGGAAAAGACAGAATCTCATTACCTGGAAGATACATCTGCTGTGGAATGTGGAAAGAAAGACATGGAGGAGGTTCTTCAGAATTGTTTGAACAAGGCAAAAATGGGTGAACAACAATGGAAGAATGCTCAAGAGTCCTTGCTAAGTCTAGAAAAGAAAAATGTTGCTTCTGTGGACTCCATTGTTAGGAGGGGAACGGAAGCCAATCAAGTTCTACGGGAAAGGTTTTCCTCTGCTGTTTCGGCTGCACTTGAAGATGTAGATGTTGCAGACAAAGATCTCCTTTCTTCTATTGACCATTCATTACAACTTGACCATGATGCTTGTGGAAACCTAAACTCAACTATCGGTCCCTGTTGTGGGGATTTGAGGGAACTTAAGGGAGGCCACTACCACAATATTGTCGAAATCACTGAGAATGCAGGAAAATTTCTACTGGAGGAATATGTGGTGGATGAACCATCGTGTTCCACACCGCGAAAGAGGTCATTCAATCTTCCTAGCATTGCATCCATTGAAGAACTTCGGACTCCTGCTTTTGAGGACTTGTTGAGATCATTCTGGGATGGAAGATCGGCAAAGCAGGCAAATGGAGACGCAAAACATCTTGCAGGGGCTTATGAGGGTGCACAATCCTTAAGAGATTCCAGACTTCCTCTCACTGCTATTAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000281 GO:0000902 GO:0000910 GO:0000911 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005819 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005886 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0008150 GO:0008574 GO:0009653 GO:0009826 GO:0009987 GO:0015630 GO:0016020 GO:0016043 GO:0016049 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0030865 GO:0031122 GO:0032502 GO:0032506 GO:0032989 GO:0032991 GO:0040007 GO:0042623 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043622 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0048589 GO:0048856 GO:0048869 GO:0051301 GO:0060560 GO:0061640 GO:0071840 GO:0071944 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:1902410 GO:1902850 GO:1903047 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

1050

Amino Acids

117.64

Weight (kDa)

5.59

Isoelectric Point (pI)

54.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	49 - 199	3.1e-28	Microtubule binding
Kinesin	PF00225	55 - 391	2.8e-116	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009274)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28620 AT2G28620 AT2G28620 AT3G45850 AT3G45850
fragaria_vesca	FvH4_3g34440 FvH4_3g34440
malus_domestica	MD03G1105700.v1.1 MD11G1118200.v1.1
prunus_persica	Prupe.6G088500_v2.0.a1
pyrus_communis	pycom03g08490 pycom11g09910
rosa_chinensis	RchiOBHm_Chr5g0062081
rosa_laevigata	RLG00000035530
rosa_multiflora	Rmu_sc0002296.1_g000013
rosa_roxburghii	Rroxscaffold_1G00018630
rosa_rugosa	Rorug05G0345900 Rorug05G0345900
rosa_samantha	Rh5AG407500 Rh5BG420800 Rh5DG435900
rosa_wichuraiana	Rw5G038370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	729
AasI	GACNNNNNNGTC	1 cut(s)	64
Acc36I	ACCTGC	1 cut(s)	142
AccB7I	CCANNNNNTGG	2 cut(s)	1123, 2215
AccII	CGCG	2 cut(s)	64, 2956
AciI	CCGC	8 cut(s)	62, 64, 101, 163, 672, 1343, 1925, 2954
AclWI	GGATC	3 cut(s)	754, 1311, 2013
AcsI	RAATTY	8 cut(s)	109, 507, 723, 1553, 1715, 1942, 1969, 2906
AcuI	CTGAAG	4 cut(s)	1388, 1995, 2010, 2540
AcyI	GRCGYC	2 cut(s)	59, 141
AdeI	CACNNNGTG	1 cut(s)	1160
AfaI	GTAC	5 cut(s)	198, 369, 428, 763, 841
AfiI	CCNNNNNNNGG	8 cut(s)	832, 1071, 1123, 1579, 2215, 2664, 2837, 2838
AflII	CTTAAG	2 cut(s)	2855, 3115
AjnI	CCWGG	1 cut(s)	2502
Alw21I	GWGCWC	4 cut(s)	614, 713, 1011, 3109
Alw26I	GTCTC	4 cut(s)	354, 764, 1253, 3066
Alw44I	GTGCAC	2 cut(s)	709, 3105
AlwI	GGATC	3 cut(s)	754, 1311, 2013
AlwNI	CAGNNNCTG	1 cut(s)	2033
Ama87I	CYCGRG	1 cut(s)	1508
AoxI	GGCC	2 cut(s)	170, 2863
ApaLI	GTGCAC	2 cut(s)	709, 3105
ApeKI	GCWGC	8 cut(s)	10, 245, 1268, 1634, 1789, 2282, 2323, 2723
ApoI	RAATTY	8 cut(s)	109, 507, 723, 1553, 1715, 1942, 1969, 2906
ArsI	GACNNNNNNTTYG	2 cut(s)	1934, 1966
Asp700I	GAANNNNTTC	3 cut(s)	1857, 2023, 3000
AspLEI	GCGC	3 cut(s)	1359, 1674, 2093
AspS9I	GGNCC	5 cut(s)	308, 1708, 1930, 2359, 2828
AsuHPI	GGTGA	3 cut(s)	863, 1098, 2597
AsuII	TTCGAA	1 cut(s)	107
AvaI	CYCGRG	1 cut(s)	1508
AvaII	GGWCC	5 cut(s)	308, 1708, 1930, 2359, 2828
AxyI	CCTNAGG	1 cut(s)	1066
BaeGI	GKGCMC	2 cut(s)	713, 3109
BbsI	GAAGAC	1 cut(s)	1873
Bbv12I	GWGCWC	4 cut(s)	614, 713, 1011, 3109
BbvI	GCAGC	8 cut(s)	22, 232, 1255, 1621, 1801, 2269, 2310, 2710
BccI	CCATC	7 cut(s)	656, 926, 1121, 1685, 1910, 2947, 3038
BceAI	ACGGC	1 cut(s)	34
BcgI	CGANNNNNNTGC	4 cut(s)	73, 107, 776, 810
BciT130I	CCWGG	1 cut(s)	2504
BciVI	GTATCC	2 cut(s)	1695, 1840
BclI	TGATCA	3 cut(s)	337, 861, 1218
BcoDI	GTCTC	4 cut(s)	354, 764, 1253, 3066
BfaI	CTAG	9 cut(s)	1001, 1625, 1871, 2183, 2306, 2343, 2397, 2627, 2979
BfmI	CTRYAG	4 cut(s)	246, 1437, 1995, 2414
BfrI	CTTAAG	2 cut(s)	2855, 3115
BfuAI	ACCTGC	1 cut(s)	142
BfuI	GTATCC	2 cut(s)	1695, 1840
BglII	AGATCT	2 cut(s)	88, 2755
BisI	GCNGC	9 cut(s)	11, 62, 246, 1269, 1635, 1790, 2283, 2324, 2724
BlpI	GCTNAGC	1 cut(s)	2087
BlsI	GCNGC	9 cut(s)	12, 63, 247, 1270, 1636, 1791, 2284, 2325, 2725
BmcAI	AGTACT	1 cut(s)	369
Bme1390I	CCNGG	1 cut(s)	2504
Bme18I	GGWCC	5 cut(s)	308, 1708, 1930, 2359, 2828
BmeT110I	CYCGRG	1 cut(s)	1508
BmgT120I	GGNCC	5 cut(s)	308, 1708, 1930, 2359, 2828
BmiI	GGNNCC	1 cut(s)	2830
BmrFI	CCNGG	1 cut(s)	2504
BmsI	GCATC	5 cut(s)	466, 1646, 2204, 2788, 2996
BpiI	GAAGAC	1 cut(s)	1873
BpmI	CTGGAG	3 cut(s)	828, 972, 2936
Bpu10I	CCTNAGC	1 cut(s)	528
Bpu1102I	GCTNAGC	1 cut(s)	2087
Bpu14I	TTCGAA	1 cut(s)	107
BpuEI	CTTGAG	4 cut(s)	392, 1235, 1499, 2592
BsaBI	GATNNNNATC	2 cut(s)	1308, 1695
BsaHI	GRCGYC	2 cut(s)	59, 141
BsaJI	CCNNGG	3 cut(s)	62, 1143, 1298
BsaXI	ACNNNNNCTCC	4 cut(s)	21, 51, 1778, 1808
Bsc4I	CCNNNNNNNGG	8 cut(s)	832, 1071, 1123, 1579, 2215, 2664, 2837, 2838
Bse118I	RCCGGY	1 cut(s)	205
Bse1I	ACTGG	6 cut(s)	1710, 1720, 1917, 2199, 2361, 2919
Bse21I	CCTNAGG	1 cut(s)	1066
Bse3DI	GCAATG	3 cut(s)	229, 1344, 2982
Bse8I	GATNNNNATC	2 cut(s)	1308, 1695
BseBI	CCWGG	1 cut(s)	2504
BseDI	CCNNGG	3 cut(s)	62, 1143, 1298
BseGI	GGATG	7 cut(s)	1113, 1507, 1921, 2195, 2938, 2987, 3049
BseJI	GATNNNNATC	2 cut(s)	1308, 1695
BseLI	CCNNNNNNNGG	8 cut(s)	832, 1071, 1123, 1579, 2215, 2664, 2837, 2838
BseMI	GCAATG	3 cut(s)	229, 1344, 2982
BseNI	ACTGG	6 cut(s)	1710, 1720, 1917, 2199, 2361, 2919
BseSI	GKGCMC	2 cut(s)	713, 3109
BseXI	GCAGC	8 cut(s)	22, 232, 1255, 1621, 1801, 2269, 2310, 2710
BsgI	GTGCAG	4 cut(s)	170, 187, 370, 2709
Bsh1236I	CGCG	2 cut(s)	64, 2956
Bsh1285I	CGRYCG	2 cut(s)	68, 98
BshFI	GGCC	2 cut(s)	172, 2865
BsiEI	CGRYCG	2 cut(s)	68, 98
BsiHKAI	GWGCWC	4 cut(s)	614, 713, 1011, 3109
BsiHKCI	CYCGRG	1 cut(s)	1508
BsiSI	CCGG	1 cut(s)	206
BslFI	GGGAC	3 cut(s)	427, 1073, 2814
BslI	CCNNNNNNNGG	8 cut(s)	832, 1071, 1123, 1579, 2215, 2664, 2837, 2838
BsmAI	GTCTC	4 cut(s)	354, 764, 1253, 3066
BsmBI	CGTCTC	2 cut(s)	1253, 3066
BsmFI	GGGAC	3 cut(s)	427, 1073, 2814
BsmI	GAATGC	3 cut(s)	1636, 2608, 2902
BsnI	GGCC	2 cut(s)	172, 2865
BsoBI	CYCGRG	1 cut(s)	1508
Bsp119I	TTCGAA	1 cut(s)	107
Bsp1286I	GDGCHC	4 cut(s)	614, 713, 1011, 3109
Bsp1720I	GCTNAGC	1 cut(s)	2087
BspACI	CCGC	8 cut(s)	62, 64, 101, 163, 672, 1343, 1925, 2954
BspANI	GGCC	2 cut(s)	172, 2865
BspFNI	CGCG	2 cut(s)	64, 2956
BspHI	TCATGA	1 cut(s)	1315
BspLI	GGNNCC	1 cut(s)	2830
BspMAI	CTGCAG	3 cut(s)	250, 1441, 1999
BspMI	ACCTGC	1 cut(s)	142
BspPI	GGATC	3 cut(s)	754, 1311, 2013
BspT104I	TTCGAA	1 cut(s)	107
BspTI	CTTAAG	2 cut(s)	2855, 3115
BsrDI	GCAATG	3 cut(s)	229, 1344, 2982
BsrFI	RCCGGY	1 cut(s)	205
BsrI	ACTGG	6 cut(s)	1710, 1720, 1917, 2199, 2361, 2919
BssAI	RCCGGY	1 cut(s)	205
BssECI	CCNNGG	3 cut(s)	62, 1143, 1298
BssNI	GRCGYC	2 cut(s)	59, 141
BssT1I	CCWWGG	1 cut(s)	1143
Bst2UI	CCWGG	1 cut(s)	2504
Bst4CI	ACNGT	6 cut(s)	1160, 1762, 2145, 2164, 2233, 2250
Bst6I	CTCTTC	5 cut(s)	13, 693, 780, 1996, 2015
BstACI	GRCGYC	2 cut(s)	59, 141
BstAFI	CTTAAG	2 cut(s)	2855, 3115
BstAPI	GCANNNNNTGC	1 cut(s)	1160
BstBI	TTCGAA	1 cut(s)	107
BstC8I	GCNNGC	7 cut(s)	170, 971, 1527, 1602, 2193, 2328, 3063
BstDSI	CCRYGG	2 cut(s)	62, 1298
BstF5I	GGATG	7 cut(s)	1113, 1507, 1921, 2195, 2938, 2987, 3049
BstFNI	CGCG	2 cut(s)	64, 2956
BstHHI	GCGC	3 cut(s)	1359, 1674, 2093
BstMAI	GTCTC	4 cut(s)	354, 764, 1253, 3066
BstMCI	CGRYCG	2 cut(s)	68, 98
BstMWI	GCNNNNNNNGC	8 cut(s)	61, 169, 533, 947, 1160, 2030, 2720, 3062
BstNI	CCWGG	1 cut(s)	2504
BstNSI	RCATGY	4 cut(s)	1089, 2099, 2191, 2195
BstSCI	CCNGG	1 cut(s)	2502
BstSFI	CTRYAG	4 cut(s)	246, 1437, 1995, 2414
BstSLI	GKGCMC	2 cut(s)	713, 3109
BstUI	CGCG	2 cut(s)	64, 2956
BstV1I	GCAGC	8 cut(s)	22, 232, 1255, 1621, 1801, 2269, 2310, 2710
BstV2I	GAAGAC	1 cut(s)	1873
BstX2I	RGATCY	4 cut(s)	88, 746, 2005, 2755
BstXI	CCANNNNNNTGG	1 cut(s)	2131
BstYI	RGATCY	4 cut(s)	88, 746, 2005, 2755
Bsu36I	CCTNAGG	1 cut(s)	1066
BsuI	GTATCC	2 cut(s)	1695, 1840
BsuRI	GGCC	2 cut(s)	172, 2865
BtgI	CCRYGG	2 cut(s)	62, 1298
BtsCI	GGATG	7 cut(s)	1113, 1507, 1921, 2195, 2938, 2987, 3049
BtsI	GCAGTG	4 cut(s)	1779, 2004, 2136, 3138
BtsIMutI	CAGTG	7 cut(s)	1767, 1779, 1910, 2004, 2136, 2889, 3138
BveI	ACCTGC	1 cut(s)	142
Cac8I	GCNNGC	7 cut(s)	170, 971, 1527, 1602, 2193, 2328, 3063
CaiI	CAGNNNCTG	1 cut(s)	2033
CciI	TCATGA	1 cut(s)	1315
CfoI	GCGC	3 cut(s)	1359, 1674, 2093
Cfr10I	RCCGGY	1 cut(s)	205
Cfr13I	GGNCC	5 cut(s)	308, 1708, 1930, 2359, 2828
Cfr42I	CCGCGG	1 cut(s)	65
CseI	GACGC	4 cut(s)	67, 130, 303, 3083
Csp6I	GTAC	5 cut(s)	197, 368, 427, 762, 840
CviQI	GTAC	5 cut(s)	197, 368, 427, 762, 840
DraIII	CACNNNGTG	1 cut(s)	1160
DrdI	GACNNNNNNGTC	1 cut(s)	64
DseDI	GACNNNNNNGTC	1 cut(s)	64
Eam1104I	CTCTTC	5 cut(s)	13, 693, 780, 1996, 2015
EarI	CTCTTC	5 cut(s)	13, 693, 780, 1996, 2015
EciI	GGCGGA	2 cut(s)	116, 1358
Eco130I	CCWWGG	1 cut(s)	1143
Eco147I	AGGCCT	1 cut(s)	172
Eco32I	GATATC	1 cut(s)	1563
Eco47I	GGWCC	5 cut(s)	308, 1708, 1930, 2359, 2828
Eco57I	CTGAAG	4 cut(s)	1388, 1995, 2010, 2540
Eco81I	CCTNAGG	1 cut(s)	1066
Eco88I	CYCGRG	1 cut(s)	1508
EcoRI	GAATTC	1 cut(s)	109
EcoRII	CCWGG	1 cut(s)	2502
EcoRV	GATATC	1 cut(s)	1563
EcoT14I	CCWWGG	1 cut(s)	1143
EcoT22I	ATGCAT	3 cut(s)	1091, 2193, 2197
ErhI	CCWWGG	1 cut(s)	1143
Esp3I	CGTCTC	2 cut(s)	1253, 3066
FalI	AAGNNNNNCTT	2 cut(s)	2745, 2777
FaqI	GGGAC	3 cut(s)	427, 1073, 2814
FbaI	TGATCA	3 cut(s)	337, 861, 1218
Fnu4HI	GCNGC	9 cut(s)	11, 62, 246, 1269, 1635, 1790, 2283, 2324, 2724
FokI	GGATG	7 cut(s)	1100, 1514, 1928, 2182, 2945, 2974, 3056
Fsp4HI	GCNGC	9 cut(s)	11, 62, 246, 1269, 1635, 1790, 2283, 2324, 2724
FspBI	CTAG	9 cut(s)	1001, 1625, 1871, 2183, 2306, 2343, 2397, 2627, 2979
GlaI	GCGC	3 cut(s)	1358, 1673, 2092
GluI	GCNGC	9 cut(s)	11, 62, 246, 1269, 1635, 1790, 2283, 2324, 2724
GsuI	CTGGAG	3 cut(s)	828, 972, 2936
HaeIII	GGCC	2 cut(s)	172, 2865
HapII	CCGG	1 cut(s)	206
HgaI	GACGC	4 cut(s)	67, 130, 303, 3083
HhaI	GCGC	3 cut(s)	1359, 1674, 2093
Hin1I	GRCGYC	2 cut(s)	59, 141
Hin6I	GCGC	3 cut(s)	1357, 1672, 2091
HinP1I	GCGC	3 cut(s)	1357, 1672, 2091
HincII	GTYRAC	3 cut(s)	889, 1953, 2430
HindII	GTYRAC	3 cut(s)	889, 1953, 2430
HindIII	AAGCTT	2 cut(s)	967, 1475
HpaII	CCGG	1 cut(s)	206
HphI	GGTGA	3 cut(s)	863, 1098, 2597
Hpy99I	CGWCG	2 cut(s)	55, 118
HpyAV	CCTTC	9 cut(s)	130, 228, 301, 319, 431, 1327, 1543, 1792, 2390
HpyCH4III	ACNGT	6 cut(s)	1160, 1762, 2145, 2164, 2233, 2250
HpyCH4IV	ACGT	1 cut(s)	425
HpyF10VI	GCNNNNNNNGC	8 cut(s)	61, 169, 533, 947, 1160, 2030, 2720, 3062
HpySE526I	ACGT	1 cut(s)	425
Hsp92I	GRCGYC	2 cut(s)	59, 141
HspAI	GCGC	3 cut(s)	1357, 1672, 2091
Ksp22I	TGATCA	3 cut(s)	337, 861, 1218
KspI	CCGCGG	1 cut(s)	65
LmnI	GCTCC	3 cut(s)	443, 1399, 1786
Lsp1109I	GCAGC	8 cut(s)	22, 232, 1255, 1621, 1801, 2269, 2310, 2710
LweI	GCATC	5 cut(s)	466, 1646, 2204, 2788, 2996
MaeI	CTAG	9 cut(s)	1001, 1625, 1871, 2183, 2306, 2343, 2397, 2627, 2979
MaeII	ACGT	1 cut(s)	425
MaeIII	GTNAC	4 cut(s)	553, 1722, 1774, 2158
MflI	RGATCY	4 cut(s)	88, 746, 2005, 2755
MhlI	GDGCHC	4 cut(s)	614, 713, 1011, 3109
MlyI	GAGTC	7 cut(s)	14, 766, 1055, 2173, 2621, 2648, 3001
Mph1103I	ATGCAT	3 cut(s)	1091, 2193, 2197
MroXI	GAANNNNTTC	3 cut(s)	1857, 2023, 3000
MseI	TTAA	7 cut(s)	1191, 2046, 2204, 2373, 2856, 3116, 3147
MspA1I	CMGCKG	2 cut(s)	64, 767
MspCI	CTTAAG	2 cut(s)	2855, 3115
MspI	CCGG	1 cut(s)	206
MspR9I	CCNGG	1 cut(s)	2504
Mva1269I	GAATGC	3 cut(s)	1636, 2608, 2902
MvaI	CCWGG	1 cut(s)	2504
MvnI	CGCG	2 cut(s)	64, 2956
MwoI	GCNNNNNNNGC	8 cut(s)	61, 169, 533, 947, 1160, 2030, 2720, 3062
NlaIV	GGNNCC	1 cut(s)	2830
NmeAIII	GCCGAG	1 cut(s)	1351
NmuCI	GTSAC	3 cut(s)	553, 1722, 1774
NsiI	ATGCAT	3 cut(s)	1091, 2193, 2197
NspI	RCATGY	4 cut(s)	1089, 2099, 2191, 2195
NspV	TTCGAA	1 cut(s)	107
PaeI	GCATGC	1 cut(s)	2195
PaeR7I	CTCGAG	1 cut(s)	1508
PagI	TCATGA	1 cut(s)	1315
PceI	AGGCCT	1 cut(s)	172
PcsI	WCGNNNNNNNCGW	5 cut(s)	47, 65, 104, 113, 422
PctI	GAATGC	3 cut(s)	1636, 2608, 2902
PdmI	GAANNNNTTC	3 cut(s)	1857, 2023, 3000
PfeI	GAWTC	8 cut(s)	104, 880, 1370, 1376, 1696, 2441, 2492, 3122
PflMI	CCANNNNNTGG	2 cut(s)	1123, 2215
PkrI	GCNGC	9 cut(s)	12, 63, 247, 1270, 1636, 1791, 2284, 2325, 2725
Ple19I	CGATCG	1 cut(s)	98
PleI	GAGTC	7 cut(s)	13, 766, 1055, 2173, 2620, 2648, 3001
PpsI	GAGTC	7 cut(s)	13, 766, 1055, 2173, 2620, 2648, 3001
PsiI	TTATAA	1 cut(s)	729
Psp6I	CCWGG	1 cut(s)	2502
PspGI	CCWGG	1 cut(s)	2502
PspN4I	GGNNCC	1 cut(s)	2830
PspPI	GGNCC	5 cut(s)	308, 1708, 1930, 2359, 2828
PstI	CTGCAG	3 cut(s)	250, 1441, 1999
PstNI	CAGNNNCTG	1 cut(s)	2033
PsuI	RGATCY	4 cut(s)	88, 746, 2005, 2755
PvuI	CGATCG	1 cut(s)	98
PvuII	CAGCTG	1 cut(s)	767
RsaI	GTAC	5 cut(s)	198, 369, 428, 763, 841
RsaNI	GTAC	5 cut(s)	197, 368, 427, 762, 840
SacII	CCGCGG	1 cut(s)	65
SaqAI	TTAA	7 cut(s)	1191, 2046, 2204, 2373, 2856, 3116, 3147
SatI	GCNGC	9 cut(s)	11, 62, 246, 1269, 1635, 1790, 2283, 2324, 2724
Sau96I	GGNCC	5 cut(s)	308, 1708, 1930, 2359, 2828
ScaI	AGTACT	1 cut(s)	369
SchI	GAGTC	7 cut(s)	14, 766, 1055, 2173, 2621, 2648, 3001
ScrFI	CCNGG	1 cut(s)	2504
SduI	GDGCHC	4 cut(s)	614, 713, 1011, 3109
SfaNI	GCATC	5 cut(s)	466, 1646, 2204, 2788, 2996
SfcI	CTRYAG	4 cut(s)	246, 1437, 1995, 2414
Sfr274I	CTCGAG	1 cut(s)	1508
Sfr303I	CCGCGG	1 cut(s)	65
SfuI	TTCGAA	1 cut(s)	107
SgrBI	CCGCGG	1 cut(s)	65
SinI	GGWCC	5 cut(s)	308, 1708, 1930, 2359, 2828
SlaI	CTCGAG	1 cut(s)	1508
SmlI	CTYRAG	7 cut(s)	371, 1250, 1478, 1508, 2607, 2855, 3115
SmoI	CTYRAG	7 cut(s)	371, 1250, 1478, 1508, 2607, 2855, 3115
SphI	GCATGC	1 cut(s)	2195
SseBI	AGGCCT	1 cut(s)	172
SsiI	CCGC	8 cut(s)	62, 64, 101, 163, 672, 1343, 1925, 2954
SspI	AATATT	1 cut(s)	2878
SspMI	CTAG	9 cut(s)	1001, 1625, 1871, 2183, 2306, 2343, 2397, 2627, 2979
StuI	AGGCCT	1 cut(s)	172
StyD4I	CCNGG	1 cut(s)	2502
StyI	CCWWGG	1 cut(s)	1143
TaaI	ACNGT	6 cut(s)	1160, 1762, 2145, 2164, 2233, 2250
TaiI	ACGT	1 cut(s)	428
TaqI	TCGA	8 cut(s)	68, 107, 113, 294, 1509, 1615, 1861, 2883
TaqII	GACCGA	1 cut(s)	2816
TatI	WGTACW	2 cut(s)	367, 839
TauI	GCSGC	1 cut(s)	64
TfiI	GAWTC	8 cut(s)	104, 880, 1370, 1376, 1696, 2441, 2492, 3122
Tru1I	TTAA	7 cut(s)	1191, 2046, 2204, 2373, 2856, 3116, 3147
Tru9I	TTAA	7 cut(s)	1191, 2046, 2204, 2373, 2856, 3116, 3147
TscAI	CASTG	7 cut(s)	1767, 1779, 1917, 2004, 2136, 2896, 3145
TseFI	GTSAC	3 cut(s)	553, 1722, 1774
TseI	GCWGC	8 cut(s)	10, 245, 1268, 1634, 1789, 2282, 2323, 2723
Tsp45I	GTSAC	3 cut(s)	553, 1722, 1774
TspGWI	ACGGA	1 cut(s)	2690
TspRI	CASTG	7 cut(s)	1767, 1779, 1917, 2004, 2136, 2896, 3145
Van91I	CCANNNNNTGG	2 cut(s)	1123, 2215
Vha464I	CTTAAG	2 cut(s)	2855, 3115
VneI	GTGCAC	2 cut(s)	709, 3105
VpaK11BI	GGWCC	5 cut(s)	308, 1708, 1930, 2359, 2828
XapI	RAATTY	8 cut(s)	109, 507, 723, 1553, 1715, 1942, 1969, 2906
XbaI	TCTAGA	2 cut(s)	2182, 2626
XceI	RCATGY	4 cut(s)	1089, 2099, 2191, 2195
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1120, 2801
XhoI	CTCGAG	1 cut(s)	1508
XmnI	GAANNNNTTC	3 cut(s)	1857, 2023, 3000
XspI	CTAG	9 cut(s)	1001, 1625, 1871, 2183, 2306, 2343, 2397, 2627, 2979
ZrmI	AGTACT	1 cut(s)	369
Zsp2I	ATGCAT	3 cut(s)	1091, 2193, 2197

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.