Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0009274

Physical Location & Seq

Genomic Coordinates Reverse (-)

70380914 .. 70387629

Gene Structure 6716 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG407500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2754 bp

ATGGAGTCGCAGCAGAGAAGAGGAGGAGGAGGAGGAGGAGGATTGGTGTCGCTATCGCCGTCGCAGACGCCGCGGTCGAGCGACAAGTCGGCGAGAGATCTGCGATCGGCGGATTCGAATTCGACGAACAGGCATGAGAAAGAGAAGGGCGTCAATGTGCAGGTTCTTGTGCGTTGCAGGCCTCTGAGTGAAGATGAAAGTAGGGTACATACGCCGGTTGTGATTTCTTGCAATGAGAATAGAAGGGAAGTGGCTGCAGTTCAGAGTATTGCTAACAAGCAGATTGATAGAACTTTTGCCTTCGATAAGGTCTTTGGTCCAGCGTCAGAACAGAAGGAATTGTATGATCAGGCTGTGTCTCCTATTGTGAACGAAGTACTTGAGGGGTATAACTGCACTATCTTTGCGTATGGTCAGACAGGGACGGGAAAGACGTACACAATGGAAGGAGGAGCAAGAAAGAAGAATGGGGAGTTTCCAAGTGATGCTGGTGTTATCCCAAGAGCTGTGAAACAAATTTTTGACATATTAGAAGCTCAGGTTGCTGAGTATAGCATGAAAGTCACTTTTTTAGAGCTGTATAATGAGGAGATAACTGATCTGTTGGCTTTAGAGGAGAGCACAAAGTTTATAGATGACAAAACTAAGAAACCGATAGCTCTCATGGAAGATGGAAAAGGCGGTGTTTTTGTGAGAGGCTTGGAAGAAGAGATAGTGTGCACAGCAAATGAAATTTATAAAATCTTGGAGAAAGGATCTGCAAAAAGGCGTACAGCTGAGACTCTTCTCAACAAGCAAAGTAGTCGTTCACACTCTATATTTTCAATCACAATCCACATTAAGGAATGTACTCCAGAGGGTGAAGAAATGATCAAGTGTGGGAAGCTGAATCTTGTTGACCTTGCTGGTTCAGAGAACATTTCTCGCTCTGGTGCAAGAGATGGCAGAGCAAGGGAAGCTGGAGAGATAAATAAAAGCTTGCTTACTCTTGGTCGTGTCATAAATGCTCTAGTTGAGCACTCTGGTCATATTCCATATAGGGATAGTAAACTAACAAGATTATTGAGGGACTCCTTAGGAGGGAAAACCAAGACATGCATAATAGCTACCATATCACCCTCCATCCATTGTTTGGAAGAAACACTCAGCACCTTGGACTATGCACACCGTGCCAAGAATATAAAGAATAAACCAGAGGTTAATCAAAAGATGATGAAATCAGCTTTGATCAAGGATTTATATACTGAAATTGATCGTCTCAAGCAAGAGGTATATGCTGCAAGAGAGAAGAATGGTATCTATATACCACGGGATCGGTATCTTCATGAAGAAGCCGAGAAGAAGGCAATGGCGGAAAAGATAGAGCGCATGGAACTTGAATCTGAATCCAAAGACAAGGTATCACTGGAGCTTCAGGAACTTTACAATTCTCAGCAACTTTTGACTGCAGAATTGACTGATAAACTTGAAAAAACTGAGAAAAAGCTCGAGGAAACTGAACATTCATTGGATGATCTTGAGGAAAAACATCGGCAGGCAAATGCGACCATTAAAGAGAAGGAATTTCTGATATCAAATCTCCTCAAATCGGAGAAATCACTTGTTGAGCGTGCATTTGAGCTTCGAGCAGAGCTAGAGAATGCTGCATCAGATGTGTCCAATTTATTTTCCAAAATTGAGCGCAAGGATAAAATTGAAGATGGGAATCGGATACTGGTCCAGAAATTCCAGTCACAGCTAACTCAACAGCTTGAAATCTTGCATAAGACAGTGGCAGTTGCAGTGACACAACAGGAGCAGCAGTTGAAGGATATGGAAGAAGATATGCAGTCATTTGTATCCACAAAGGCAGAGGCTACCGAAGAACTTCGAGGAAGACTAGGAAAGCTGAAAAAAATGTATGGTTCTGGTATCAAGACACTGGATGGTATAGCGGTGGACCTTGAAGGAAATTCTCAGTCAACTTTTTGTCATCTAAATTCTGAAGTTTCTAACCACTCTTCTGCAGTGGAGGATCTCTTCAAAGGAATTGCTTCAGAAGCTGATGAATTGCTTAATGATCTTCAAAGTAATCTTCACAAGCAAGAGGAGAAGCTAAGCGCACATGCACAACAACAGCGTGAGGCTCATGCCAGAGCAGTGGAAATGGCACGGTCAGTTTCTAAAGTTACTGTGGACTTCTTCAAGACTCTAGACATGCATGCATCCAGTTTAAGCCAAATTGTGGAAGAAGCACAAACTGTCAATGATAAGAAACTGTCTGAGCTTGAAGAAAAGTTTGAGGAGTGTGCTGCTAATGAAGAAAGGCAGTTGCTAGAAAAAGTGGCAGAGCTGCTGGCAAGTTCAAATGCTAGGAAGAAAAGACTGGTCCAAACAGCAGTTAATGACCTTCGGGAGAGTGCAACTAGCAGAACCAACAAGCTACAGCAAGAAATGTCAACCATGCAAGATTCAACTTCTTCTATCAAAGCAAAATGGACAATTCACATGGAAAAGACAGAATCTCATTACCTGGAAGATACATCTGCTGTGGAATGTGGAAAGAAAGACATGGAGGAGGTTCTTCAGAATTGTTTGAACAAGGCAAAAATGGGTGAACAACAATGGAAGAATGCTCAAGAGTCCTTGCTAAGTCTAGAAAAGAAAAATGTTGCTTCTGTGGACTCCATTGTTAGGTATGATAATATGCTTTGCTTATTCCTTATAATACTGCAGGTTTCAATTGTAAATTATTCATTTCTCTTTTCTATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000281 GO:0000902 GO:0000910 GO:0000911 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005819 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005886 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0008150 GO:0008574 GO:0009653 GO:0009826 GO:0009987 GO:0015630 GO:0016020 GO:0016043 GO:0016049 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0030865 GO:0031122 GO:0032502 GO:0032506 GO:0032989 GO:0032991 GO:0040007 GO:0042623 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043622 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0048589 GO:0048856 GO:0048869 GO:0051301 GO:0060560 GO:0061640 GO:0071840 GO:0071944 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:1902410 GO:1902850 GO:1903047 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

917

Amino Acids

103.14

Weight (kDa)

5.69

Isoelectric Point (pI)

52.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	52 - 202	2.5e-28	Microtubule binding
Kinesin	PF00225	58 - 394	2.1e-116	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009274)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28620 AT2G28620 AT2G28620 AT3G45850 AT3G45850
fragaria_vesca	FvH4_3g34440 FvH4_3g34440
malus_domestica	MD03G1105700.v1.1 MD11G1118200.v1.1
prunus_persica	Prupe.6G088500_v2.0.a1
pyrus_communis	pycom03g08490 pycom11g09910
rosa_chinensis	RchiOBHm_Chr5g0062081
rosa_laevigata	RLG00000035530
rosa_multiflora	Rmu_sc0002296.1_g000013
rosa_roxburghii	Rroxscaffold_1G00018630
rosa_rugosa	Rorug05G0345900 Rorug05G0345900
rosa_samantha	Rh5AG407500 Rh5BG420800 Rh5DG435900
rosa_wichuraiana	Rw5G038370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	738, 2705
AasI	GACNNNNNNGTC	1 cut(s)	73
Acc36I	ACCTGC	2 cut(s)	151, 2704
AccB7I	CCANNNNNTGG	2 cut(s)	1132, 2224
AccII	CGCG	1 cut(s)	73
AciI	CCGC	6 cut(s)	71, 73, 110, 681, 1352, 1934
AclWI	GGATC	3 cut(s)	763, 1320, 2022
AcsI	RAATTY	7 cut(s)	118, 516, 732, 1562, 1724, 1951, 1978
AcuI	CTGAAG	4 cut(s)	1397, 2004, 2019, 2549
AcyI	GRCGYC	2 cut(s)	68, 150
AdeI	CACNNNGTG	1 cut(s)	1169
AfaI	GTAC	5 cut(s)	207, 378, 437, 772, 850
AfiI	CCNNNNNNNGG	6 cut(s)	841, 1080, 1132, 1588, 2224, 2673
AjnI	CCWGG	1 cut(s)	2511
Alw21I	GWGCWC	3 cut(s)	623, 722, 1020
Alw26I	GTCTC	3 cut(s)	363, 773, 1262
Alw44I	GTGCAC	1 cut(s)	718
AlwI	GGATC	3 cut(s)	763, 1320, 2022
AlwNI	CAGNNNCTG	1 cut(s)	2042
Ama87I	CYCGRG	1 cut(s)	1487
AoxI	GGCC	1 cut(s)	179
ApaLI	GTGCAC	1 cut(s)	718
ApeKI	GCWGC	7 cut(s)	10, 254, 1277, 1643, 1798, 2291, 2332
ApoI	RAATTY	7 cut(s)	118, 516, 732, 1562, 1724, 1951, 1978
Asp700I	GAANNNNTTC	2 cut(s)	1866, 2032
AspLEI	GCGC	3 cut(s)	1368, 1683, 2102
AspS9I	GGNCC	4 cut(s)	317, 1717, 1939, 2368
AsuHPI	GGTGA	3 cut(s)	872, 1107, 2606
AsuII	TTCGAA	1 cut(s)	116
AvaI	CYCGRG	1 cut(s)	1487
AvaII	GGWCC	4 cut(s)	317, 1717, 1939, 2368
AxyI	CCTNAGG	1 cut(s)	1075
BaeGI	GKGCMC	1 cut(s)	722
BbsI	GAAGAC	1 cut(s)	1882
Bbv12I	GWGCWC	3 cut(s)	623, 722, 1020
BbvI	GCAGC	7 cut(s)	22, 241, 1264, 1630, 1810, 2278, 2319
BccI	CCATC	5 cut(s)	665, 935, 1130, 1694, 1919
BceAI	ACGGC	1 cut(s)	43
BcgI	CGANNNNNNTGC	4 cut(s)	82, 116, 785, 819
BciT130I	CCWGG	1 cut(s)	2513
BciVI	GTATCC	2 cut(s)	1704, 1849
BclI	TGATCA	3 cut(s)	346, 870, 1227
BcoDI	GTCTC	3 cut(s)	363, 773, 1262
BfaI	CTAG	8 cut(s)	1010, 1634, 1880, 2192, 2315, 2352, 2406, 2636
BfmI	CTRYAG	5 cut(s)	255, 1446, 2004, 2423, 2711
BfuAI	ACCTGC	2 cut(s)	151, 2704
BfuI	GTATCC	2 cut(s)	1704, 1849
BglII	AGATCT	1 cut(s)	97
BisI	GCNGC	8 cut(s)	11, 71, 255, 1278, 1644, 1799, 2292, 2333
BlpI	GCTNAGC	1 cut(s)	2096
BlsI	GCNGC	8 cut(s)	12, 72, 256, 1279, 1645, 1800, 2293, 2334
BmcAI	AGTACT	1 cut(s)	378
Bme1390I	CCNGG	1 cut(s)	2513
Bme18I	GGWCC	4 cut(s)	317, 1717, 1939, 2368
BmeT110I	CYCGRG	1 cut(s)	1487
BmgT120I	GGNCC	4 cut(s)	317, 1717, 1939, 2368
BmrFI	CCNGG	1 cut(s)	2513
BmsI	GCATC	3 cut(s)	475, 1655, 2213
BpiI	GAAGAC	1 cut(s)	1882
BpmI	CTGGAG	3 cut(s)	837, 981, 1427
Bpu10I	CCTNAGC	1 cut(s)	537
Bpu1102I	GCTNAGC	1 cut(s)	2096
Bpu14I	TTCGAA	1 cut(s)	116
BpuEI	CTTGAG	4 cut(s)	401, 1244, 1538, 2601
BsaBI	GATNNNNATC	2 cut(s)	1317, 1704
BsaHI	GRCGYC	2 cut(s)	68, 150
BsaJI	CCNNGG	3 cut(s)	71, 1152, 1307
BsaXI	ACNNNNNCTCC	4 cut(s)	30, 60, 1787, 1817
Bsc4I	CCNNNNNNNGG	6 cut(s)	841, 1080, 1132, 1588, 2224, 2673
Bse118I	RCCGGY	1 cut(s)	214
Bse1I	ACTGG	6 cut(s)	1410, 1719, 1729, 1926, 2208, 2370
Bse21I	CCTNAGG	1 cut(s)	1075
Bse3DI	GCAATG	2 cut(s)	238, 1353
Bse8I	GATNNNNATC	2 cut(s)	1317, 1704
BseBI	CCWGG	1 cut(s)	2513
BseDI	CCNNGG	3 cut(s)	71, 1152, 1307
BseGI	GGATG	4 cut(s)	1122, 1516, 1930, 2204
BseJI	GATNNNNATC	2 cut(s)	1317, 1704
BseLI	CCNNNNNNNGG	6 cut(s)	841, 1080, 1132, 1588, 2224, 2673
BseMI	GCAATG	2 cut(s)	238, 1353
BseMII	CTCAG	9 cut(s)	176, 537, 551, 768, 1159, 1445, 1467, 1970, 2253
BseNI	ACTGG	6 cut(s)	1410, 1719, 1729, 1926, 2208, 2370
BseSI	GKGCMC	1 cut(s)	722
BseXI	GCAGC	7 cut(s)	22, 241, 1264, 1630, 1810, 2278, 2319
BsgI	GTGCAG	2 cut(s)	179, 379
Bsh1236I	CGCG	1 cut(s)	73
Bsh1285I	CGRYCG	2 cut(s)	77, 107
BshFI	GGCC	1 cut(s)	181
BsiEI	CGRYCG	2 cut(s)	77, 107
BsiHKAI	GWGCWC	3 cut(s)	623, 722, 1020
BsiHKCI	CYCGRG	1 cut(s)	1487
BsiSI	CCGG	1 cut(s)	215
BslFI	GGGAC	2 cut(s)	436, 1082
BslI	CCNNNNNNNGG	6 cut(s)	841, 1080, 1132, 1588, 2224, 2673
BsmAI	GTCTC	3 cut(s)	363, 773, 1262
BsmBI	CGTCTC	1 cut(s)	1262
BsmFI	GGGAC	2 cut(s)	436, 1082
BsmI	GAATGC	2 cut(s)	1645, 2617
BsnI	GGCC	1 cut(s)	181
BsoBI	CYCGRG	1 cut(s)	1487
Bsp119I	TTCGAA	1 cut(s)	116
Bsp1286I	GDGCHC	3 cut(s)	623, 722, 1020
Bsp1720I	GCTNAGC	1 cut(s)	2096
BspACI	CCGC	6 cut(s)	71, 73, 110, 681, 1352, 1934
BspANI	GGCC	1 cut(s)	181
BspCNI	CTCAG	9 cut(s)	177, 538, 550, 769, 1158, 1444, 1468, 1969, 2254
BspFNI	CGCG	1 cut(s)	73
BspHI	TCATGA	1 cut(s)	1324
BspMAI	CTGCAG	4 cut(s)	259, 1450, 2008, 2715
BspMI	ACCTGC	2 cut(s)	151, 2704
BspPI	GGATC	3 cut(s)	763, 1320, 2022
BspT104I	TTCGAA	1 cut(s)	116
BsrDI	GCAATG	2 cut(s)	238, 1353
BsrFI	RCCGGY	1 cut(s)	214
BsrI	ACTGG	6 cut(s)	1410, 1719, 1729, 1926, 2208, 2370
BssAI	RCCGGY	1 cut(s)	214
BssECI	CCNNGG	3 cut(s)	71, 1152, 1307
BssNI	GRCGYC	2 cut(s)	68, 150
BssT1I	CCWWGG	1 cut(s)	1152
Bst2UI	CCWGG	1 cut(s)	2513
Bst4CI	ACNGT	6 cut(s)	1169, 1771, 2154, 2173, 2242, 2259
Bst6I	CTCTTC	5 cut(s)	13, 702, 789, 2005, 2024
BstACI	GRCGYC	2 cut(s)	68, 150
BstAPI	GCANNNNNTGC	1 cut(s)	1169
BstBI	TTCGAA	1 cut(s)	116
BstC8I	GCNNGC	6 cut(s)	179, 980, 1536, 1611, 2202, 2337
BstDSI	CCRYGG	2 cut(s)	71, 1307
BstF5I	GGATG	4 cut(s)	1122, 1516, 1930, 2204
BstFNI	CGCG	1 cut(s)	73
BstHHI	GCGC	3 cut(s)	1368, 1683, 2102
BstMAI	GTCTC	3 cut(s)	363, 773, 1262
BstMCI	CGRYCG	2 cut(s)	77, 107
BstMWI	GCNNNNNNNGC	6 cut(s)	70, 178, 542, 956, 1169, 2039
BstNI	CCWGG	1 cut(s)	2513
BstNSI	RCATGY	4 cut(s)	1098, 2108, 2200, 2204
BstSCI	CCNGG	1 cut(s)	2511
BstSFI	CTRYAG	5 cut(s)	255, 1446, 2004, 2423, 2711
BstSLI	GKGCMC	1 cut(s)	722
BstUI	CGCG	1 cut(s)	73
BstV1I	GCAGC	7 cut(s)	22, 241, 1264, 1630, 1810, 2278, 2319
BstV2I	GAAGAC	1 cut(s)	1882
BstX2I	RGATCY	3 cut(s)	97, 755, 2014
BstXI	CCANNNNNNTGG	1 cut(s)	2140
BstYI	RGATCY	3 cut(s)	97, 755, 2014
Bsu36I	CCTNAGG	1 cut(s)	1075
BsuI	GTATCC	2 cut(s)	1704, 1849
BsuRI	GGCC	1 cut(s)	181
BtgI	CCRYGG	2 cut(s)	71, 1307
BtsCI	GGATG	4 cut(s)	1122, 1516, 1930, 2204
BtsI	GCAGTG	3 cut(s)	1788, 2013, 2145
BtsIMutI	CAGTG	6 cut(s)	1403, 1776, 1788, 1919, 2013, 2145
BveI	ACCTGC	2 cut(s)	151, 2704
Cac8I	GCNNGC	6 cut(s)	179, 980, 1536, 1611, 2202, 2337
CaiI	CAGNNNCTG	1 cut(s)	2042
CciI	TCATGA	1 cut(s)	1324
CfoI	GCGC	3 cut(s)	1368, 1683, 2102
Cfr10I	RCCGGY	1 cut(s)	214
Cfr13I	GGNCC	4 cut(s)	317, 1717, 1939, 2368
Cfr42I	CCGCGG	1 cut(s)	74
CseI	GACGC	3 cut(s)	76, 139, 312
Csp6I	GTAC	5 cut(s)	206, 377, 436, 771, 849
CviQI	GTAC	5 cut(s)	206, 377, 436, 771, 849
DraIII	CACNNNGTG	1 cut(s)	1169
DrdI	GACNNNNNNGTC	1 cut(s)	73
DseDI	GACNNNNNNGTC	1 cut(s)	73
Eam1104I	CTCTTC	5 cut(s)	13, 702, 789, 2005, 2024
EarI	CTCTTC	5 cut(s)	13, 702, 789, 2005, 2024
EciI	GGCGGA	2 cut(s)	125, 1367
Eco130I	CCWWGG	1 cut(s)	1152
Eco147I	AGGCCT	1 cut(s)	181
Eco32I	GATATC	1 cut(s)	1572
Eco47I	GGWCC	4 cut(s)	317, 1717, 1939, 2368
Eco57I	CTGAAG	4 cut(s)	1397, 2004, 2019, 2549
Eco81I	CCTNAGG	1 cut(s)	1075
Eco88I	CYCGRG	1 cut(s)	1487
EcoRI	GAATTC	1 cut(s)	118
EcoRII	CCWGG	1 cut(s)	2511
EcoRV	GATATC	1 cut(s)	1572
EcoT14I	CCWWGG	1 cut(s)	1152
EcoT22I	ATGCAT	3 cut(s)	1100, 2202, 2206
ErhI	CCWWGG	1 cut(s)	1152
Esp3I	CGTCTC	1 cut(s)	1262
FaqI	GGGAC	2 cut(s)	436, 1082
FbaI	TGATCA	3 cut(s)	346, 870, 1227
Fnu4HI	GCNGC	8 cut(s)	11, 71, 255, 1278, 1644, 1799, 2292, 2333
FokI	GGATG	4 cut(s)	1109, 1523, 1937, 2191
Fsp4HI	GCNGC	8 cut(s)	11, 71, 255, 1278, 1644, 1799, 2292, 2333
FspBI	CTAG	8 cut(s)	1010, 1634, 1880, 2192, 2315, 2352, 2406, 2636
GlaI	GCGC	3 cut(s)	1367, 1682, 2101
GluI	GCNGC	8 cut(s)	11, 71, 255, 1278, 1644, 1799, 2292, 2333
GsuI	CTGGAG	3 cut(s)	837, 981, 1427
HaeIII	GGCC	1 cut(s)	181
HapII	CCGG	1 cut(s)	215
HgaI	GACGC	3 cut(s)	76, 139, 312
HhaI	GCGC	3 cut(s)	1368, 1683, 2102
Hin1I	GRCGYC	2 cut(s)	68, 150
Hin6I	GCGC	3 cut(s)	1366, 1681, 2100
HinP1I	GCGC	3 cut(s)	1366, 1681, 2100
HincII	GTYRAC	3 cut(s)	898, 1962, 2439
HindII	GTYRAC	3 cut(s)	898, 1962, 2439
HindIII	AAGCTT	1 cut(s)	976
HpaII	CCGG	1 cut(s)	215
HphI	GGTGA	3 cut(s)	872, 1107, 2606
Hpy99I	CGWCG	2 cut(s)	64, 127
HpyCH4III	ACNGT	6 cut(s)	1169, 1771, 2154, 2173, 2242, 2259
HpyCH4IV	ACGT	1 cut(s)	434
HpyF10VI	GCNNNNNNNGC	6 cut(s)	70, 178, 542, 956, 1169, 2039
HpySE526I	ACGT	1 cut(s)	434
Hsp92I	GRCGYC	2 cut(s)	68, 150
HspAI	GCGC	3 cut(s)	1366, 1681, 2100
Ksp22I	TGATCA	3 cut(s)	346, 870, 1227
KspI	CCGCGG	1 cut(s)	74
LmnI	GCTCC	3 cut(s)	452, 1408, 1795
Lsp1109I	GCAGC	7 cut(s)	22, 241, 1264, 1630, 1810, 2278, 2319
LweI	GCATC	3 cut(s)	475, 1655, 2213
MaeI	CTAG	8 cut(s)	1010, 1634, 1880, 2192, 2315, 2352, 2406, 2636
MaeII	ACGT	1 cut(s)	434
MaeIII	GTNAC	4 cut(s)	562, 1731, 1783, 2167
MfeI	CAATTG	1 cut(s)	2721
MflI	RGATCY	3 cut(s)	97, 755, 2014
MhlI	GDGCHC	3 cut(s)	623, 722, 1020
MlyI	GAGTC	6 cut(s)	14, 775, 1064, 2182, 2630, 2657
Mph1103I	ATGCAT	3 cut(s)	1100, 2202, 2206
MroXI	GAANNNNTTC	2 cut(s)	1866, 2032
MseI	TTAA	6 cut(s)	840, 1200, 1551, 2055, 2213, 2382
MspA1I	CMGCKG	2 cut(s)	73, 776
MspI	CCGG	1 cut(s)	215
MspR9I	CCNGG	1 cut(s)	2513
MunI	CAATTG	1 cut(s)	2721
Mva1269I	GAATGC	2 cut(s)	1645, 2617
MvaI	CCWGG	1 cut(s)	2513
MvnI	CGCG	1 cut(s)	73
MwoI	GCNNNNNNNGC	6 cut(s)	70, 178, 542, 956, 1169, 2039
NmeAIII	GCCGAG	1 cut(s)	1360
NmuCI	GTSAC	3 cut(s)	562, 1731, 1783
NsiI	ATGCAT	3 cut(s)	1100, 2202, 2206
NspI	RCATGY	4 cut(s)	1098, 2108, 2200, 2204
NspV	TTCGAA	1 cut(s)	116
PaeI	GCATGC	1 cut(s)	2204
PaeR7I	CTCGAG	1 cut(s)	1487
PagI	TCATGA	1 cut(s)	1324
PceI	AGGCCT	1 cut(s)	181
PcsI	WCGNNNNNNNCGW	5 cut(s)	56, 74, 113, 122, 431
PctI	GAATGC	2 cut(s)	1645, 2617
PdmI	GAANNNNTTC	2 cut(s)	1866, 2032
PfeI	GAWTC	7 cut(s)	113, 889, 1379, 1385, 1705, 2450, 2501
PflMI	CCANNNNNTGG	2 cut(s)	1132, 2224
PkrI	GCNGC	8 cut(s)	12, 72, 256, 1279, 1645, 1800, 2293, 2334
Ple19I	CGATCG	1 cut(s)	107
PleI	GAGTC	6 cut(s)	13, 775, 1064, 2182, 2629, 2657
PpsI	GAGTC	6 cut(s)	13, 775, 1064, 2182, 2629, 2657
PsiI	TTATAA	2 cut(s)	738, 2705
Psp6I	CCWGG	1 cut(s)	2511
PspGI	CCWGG	1 cut(s)	2511
PspPI	GGNCC	4 cut(s)	317, 1717, 1939, 2368
PspXI	VCTCGAGB	1 cut(s)	1487
PstI	CTGCAG	4 cut(s)	259, 1450, 2008, 2715
PstNI	CAGNNNCTG	1 cut(s)	2042
PsuI	RGATCY	3 cut(s)	97, 755, 2014
PvuI	CGATCG	1 cut(s)	107
PvuII	CAGCTG	1 cut(s)	776
RsaI	GTAC	5 cut(s)	207, 378, 437, 772, 850
RsaNI	GTAC	5 cut(s)	206, 377, 436, 771, 849
SacII	CCGCGG	1 cut(s)	74
SaqAI	TTAA	6 cut(s)	840, 1200, 1551, 2055, 2213, 2382
SatI	GCNGC	8 cut(s)	11, 71, 255, 1278, 1644, 1799, 2292, 2333
Sau96I	GGNCC	4 cut(s)	317, 1717, 1939, 2368
ScaI	AGTACT	1 cut(s)	378
SchI	GAGTC	6 cut(s)	14, 775, 1064, 2182, 2630, 2657
ScrFI	CCNGG	1 cut(s)	2513
SduI	GDGCHC	3 cut(s)	623, 722, 1020
SfaNI	GCATC	3 cut(s)	475, 1655, 2213
SfcI	CTRYAG	5 cut(s)	255, 1446, 2004, 2423, 2711
Sfr274I	CTCGAG	1 cut(s)	1487
Sfr303I	CCGCGG	1 cut(s)	74
SfuI	TTCGAA	1 cut(s)	116
SgrBI	CCGCGG	1 cut(s)	74
SinI	GGWCC	4 cut(s)	317, 1717, 1939, 2368
SlaI	CTCGAG	1 cut(s)	1487
SmlI	CTYRAG	5 cut(s)	380, 1259, 1487, 1517, 2616
SmoI	CTYRAG	5 cut(s)	380, 1259, 1487, 1517, 2616
SphI	GCATGC	1 cut(s)	2204
SseBI	AGGCCT	1 cut(s)	181
SsiI	CCGC	6 cut(s)	71, 73, 110, 681, 1352, 1934
SspMI	CTAG	8 cut(s)	1010, 1634, 1880, 2192, 2315, 2352, 2406, 2636
StuI	AGGCCT	1 cut(s)	181
StyD4I	CCNGG	1 cut(s)	2511
StyI	CCWWGG	1 cut(s)	1152
TaaI	ACNGT	6 cut(s)	1169, 1771, 2154, 2173, 2242, 2259
TaiI	ACGT	1 cut(s)	437
TaqI	TCGA	7 cut(s)	77, 116, 122, 303, 1488, 1624, 1870
TatI	WGTACW	2 cut(s)	376, 848
TauI	GCSGC	1 cut(s)	73
TfiI	GAWTC	7 cut(s)	113, 889, 1379, 1385, 1705, 2450, 2501
Tru1I	TTAA	6 cut(s)	840, 1200, 1551, 2055, 2213, 2382
Tru9I	TTAA	6 cut(s)	840, 1200, 1551, 2055, 2213, 2382
TscAI	CASTG	6 cut(s)	1410, 1776, 1788, 1926, 2013, 2145
TseFI	GTSAC	3 cut(s)	562, 1731, 1783
TseI	GCWGC	7 cut(s)	10, 254, 1277, 1643, 1798, 2291, 2332
Tsp45I	GTSAC	3 cut(s)	562, 1731, 1783
TspRI	CASTG	6 cut(s)	1410, 1776, 1788, 1926, 2013, 2145
Van91I	CCANNNNNTGG	2 cut(s)	1132, 2224
VneI	GTGCAC	1 cut(s)	718
VpaK11BI	GGWCC	4 cut(s)	317, 1717, 1939, 2368
XapI	RAATTY	7 cut(s)	118, 516, 732, 1562, 1724, 1951, 1978
XbaI	TCTAGA	2 cut(s)	2191, 2635
XceI	RCATGY	4 cut(s)	1098, 2108, 2200, 2204
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1129
XhoI	CTCGAG	1 cut(s)	1487
XmnI	GAANNNNTTC	2 cut(s)	1866, 2032
XspI	CTAG	8 cut(s)	1010, 1634, 1880, 2192, 2315, 2352, 2406, 2636
ZrmI	AGTACT	1 cut(s)	378
Zsp2I	ATGCAT	3 cut(s)	1100, 2202, 2206

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.