Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0009274

Physical Location & Seq

Genomic Coordinates Reverse (-)

67651837 .. 67658123

Gene Structure 6287 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ33839

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3159 bp

ATGGAGTCGCAGCAGAGAAGAGGAGGAGGAGGAGGAGGACTGGTGTCTCTGTCGCCGTCGCAGACGCCGCGGTCGAGCGACAAGTCGGCGAGAGATCTGCGATCGGCGGATTCGAATTCGACGAACAGGCATGAGAAAGAGAAGGGCGTCAATGTGCAGGTTCTTGTGCGTTGCAGGCCTCTGAGTGAAGATGAAAGTAGGGTACATACGCCGGTTGTGATTTCTTGCAATGAGAATAGAAGGGAAGTGGCTGCAGTTCAGAGTATTGCTAACAAGCAGATTGATAGAACCTTTGCCTTCGACAAGGTCTTTGGTCCAGCATCAGAACAGAAGGAATTGTATGATCAGGCGGTGTCTCCTATTGTGAACGAAGTACTTGAGGGGTATAACTGCACTATCTTTGCGTATGGTCAGACAGGGACGGGAAAGACGTACACAATGGAAGGAGGAGCAAGAAAGAAGAATGGGGAGTTTCCAAGTGATGCTGGTGTTATCCCAAGAGCTGTGAAACAAATTTTTGACATATTAGAAGCTCAGGTTGCTGAGTATAGCATGAAAGTCACTTTTTTAGAGCTGTATAATGAGGAGATAACTGATCTGTTGGCTTTAGAGGAGAGCACAAAGTTTATAGATGACAAAACTAAGAAACCGATAGCTCTCATGGAAGATGGAAAAGGCGGTGTTTTTGTGAGAGGCTTGGAAGAAGAGATCGTGTGCACAGCAAATGAAATTTATAAAATCTTGGAGAAAGGATCTGCAAAAAGGCGTACAGCTGAGACTCTTCTCAACAAGCAAAGTAGTCGTTCACACTCTATATTTTCAATCACAATCCACATTAAGGAATGTACTCCAGAGGGTGAAGAAATGATCAAGTGTGGGAAGCTGAATCTTGTTGACCTTGCTGGTTCAGAGAACATTTCTCGCTCTGGTGCAAGAGATGGCAGAGCAAGGGAAGCTGGAGAGATAAATAAAAGCTTGCTTACTCTTGGTCGTGTCATAAATGCTCTAGTTGAGCACTCTGGTCATATTCCATATAGGGATAGTAAACTAACAAGATTATTGAGGGACTCCTTAGGAGGGAAAACCAAGACATGCATAATAGCTACCATATCACCCTCCATCCATTGTTTGGAAGAAACACTCAGCACCTTGGACTATGCACACCGTGCCAAGAATATAAAGAATAAACCAGAGGTTAATCAAAAGATGATGAAATCAGCTTTGATCAAGGATTTATATACTGAAATTGACCGTCTCAAGCAAGAGGTATATGCTGCAAGAGAGAAGAATGGTATCTATATACCACGGGATCGGTATCTTCATGAAGAAGCCGAGAAGAAGGCAATGGCGGAAAAGATAGAGCGCATGGAACTTGAATCTGAATCCAAGGACAAGGTATCATTGGAGCTTCAGGAACTTTACAATTCTCAGCAACTTTTGACTGCAGAATTGACTGATAAACTTGAAAAAACTGAGAAAAAGCTCGAGGAAACTGAACATTCATTGGATGATCTTGAGGAAAAACATCGGCAGGCAAATGCGACCATTAAAGAGAAGGAATTTCTGATATCCAATCTCCTCAAATCGGAGAAATCACTTGTTGAGCGTGCATTTGAGCTTCGAGCAGAGCTAGAGAATGCTGCATCAGATGTGTCCAATTTATTTTCCAAAATTGAGCGCAAGGATAAAATTGAAGATGGGAATCGGATACTGGTCCAGAAATTCCAGTCACAGCTAACTCAACAGCTTGAAATCTTGCATAAGACAGTGGCAGTTGCAGTGACACAACAGGAGCAGCAGTTGAAGGATATGGAAGAAGATATGCAGTCATTTGTATCCACAAAGGCAGAGGCTACCGAAGAACTTCGAGGAAGACTAGGAAAGCTGAAAAAAATGTATGGTTCTGGTATCAAGACACTGGATGGTATAGCAGTGGACCTTGAAGGAAATTCTCAGTCAACTTTTTGTCATCTAAATTCTGAAGTTTCTAACCACTCTTCTGCAGTGGAGGATCTCTTCAAAGGAATTGCTTCAGAAGCTGATGAATTACTTAATGATCTTCAAAGTAATCTTCACAAGCAAGAGGAGAAGCTAAGCGCACATGCACAACAACAGCGTGAGGCTCATGCCAGAGCAGTGGAAATGGCACGGTCAGTTTCTAAAGTTACTGTGGACTTCTTCAAGACTCTAGACATGCATGCATCCAGTTTAAGCCAAATTGTGGAAGAAGCACAAACTGTCAATGATAAGAAACTGTCTGAGCTTGAAGAAAAGTTTGAGGAGTGTGCTGCTAATGAAGAAAGGCAGTTGCTAGAAAAAGTGGCAGAGCTGCTGGCAAGTTCAAATGCTAGGAAGAAAAGACTGGTCCAAACAGCAGTTAATGACCTTCGGGAGAGTGCAACTAGCAGAACCAACAAGCTACAGCAAGAAATGTCAACCATGCAAGATTCTACTTCTTCTATCAAAGCAAAATGGACAATTCACATGGAAAAGACAGAATCTCATTACCTGGAAGATACATCTGCTGTGGAATGTGGAAAGAAAGACATGGAGGAGGTTCTTCAGAATTGTTTGAACAAGGCAAAAATGGGTGAACAACAATGGAAGAATGCTCAAGAGTCCTTGCTAAGTCTAGAAAAGAAAAATGTTGCTTCTGTGGACTCCATTGTTAGGAGGGGAACGGAAGCCAATCAAGTTCTACGGGAAAGGTTTTCCTCTGCTGTTTCGGCTGCACTTGAAGATGTAGATGTTGCAGACAAAGATCTCCTTTCTTCTATTGACCATTCATTACAACTTGACCATGATGCTTGTGGAAACCTAAACTCAACTATCGGTCCCTGTTGCGGGGATTTGAGGGAACTTAAGGGAGGCCACTACCATAATATTGTCGAAATCACTGAGAATGCAGGAAAATTTCTACTGGAGGAATATGTGGTGGATGAACCATCGTGTTCCACACCGCGAAAGAGGTCATTCAATCTTCCTAGCATTGCATCCATTGAAGAACTTCGGACTCCTGCTTTTGAGGACTTGTTGAGATCATTCTGGGATGGAAGATCGGCAAAGCAGGCAAATGGAGACGCAAAACATCTTGCAGGGGCTTATGAGGGTGCACAATCCTTAAGAGATTCCAGACTTCCTCTCACTGCTATTAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000281 GO:0000902 GO:0000910 GO:0000911 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005819 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005886 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0008150 GO:0008574 GO:0009653 GO:0009826 GO:0009987 GO:0015630 GO:0016020 GO:0016043 GO:0016049 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0030865 GO:0031122 GO:0032502 GO:0032506 GO:0032989 GO:0032991 GO:0040007 GO:0042623 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043622 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0048589 GO:0048856 GO:0048869 GO:0051301 GO:0060560 GO:0061640 GO:0071840 GO:0071944 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:1902410 GO:1902850 GO:1903047 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

1052

Amino Acids

117.7

Weight (kDa)

5.57

Isoelectric Point (pI)

54.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	51 - 201	3.1e-28	Microtubule binding
Kinesin	PF00225	57 - 393	2.8e-116	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009274)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28620 AT2G28620 AT2G28620 AT3G45850 AT3G45850
fragaria_vesca	FvH4_3g34440 FvH4_3g34440
malus_domestica	MD03G1105700.v1.1 MD11G1118200.v1.1
prunus_persica	Prupe.6G088500_v2.0.a1
pyrus_communis	pycom03g08490 pycom11g09910
rosa_chinensis	RchiOBHm_Chr5g0062081
rosa_laevigata	RLG00000035530
rosa_multiflora	Rmu_sc0002296.1_g000013
rosa_roxburghii	Rroxscaffold_1G00018630
rosa_rugosa	Rorug05G0345900 Rorug05G0345900
rosa_samantha	Rh5AG407500 Rh5BG420800 Rh5DG435900
rosa_wichuraiana	Rw5G038370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	735
AasI	GACNNNNNNGTC	1 cut(s)	70
Acc36I	ACCTGC	1 cut(s)	148
AccB7I	CCANNNNNTGG	2 cut(s)	1129, 2221
AccII	CGCG	2 cut(s)	70, 2962
AciI	CCGC	8 cut(s)	68, 70, 107, 350, 678, 1349, 2844, 2960
AclWI	GGATC	3 cut(s)	760, 1317, 2019
AcsI	RAATTY	8 cut(s)	115, 513, 729, 1559, 1721, 1948, 1975, 2912
AcuI	CTGAAG	4 cut(s)	1394, 2001, 2016, 2546
AcyI	GRCGYC	2 cut(s)	65, 147
AdeI	CACNNNGTG	1 cut(s)	1166
AfaI	GTAC	5 cut(s)	204, 375, 434, 769, 847
AfiI	CCNNNNNNNGG	8 cut(s)	838, 1077, 1129, 1585, 2221, 2670, 2843, 2844
AflII	CTTAAG	2 cut(s)	2861, 3121
AjnI	CCWGG	1 cut(s)	2508
Alw21I	GWGCWC	4 cut(s)	620, 719, 1017, 3115
Alw26I	GTCTC	5 cut(s)	51, 360, 770, 1259, 3072
Alw44I	GTGCAC	2 cut(s)	715, 3111
AlwI	GGATC	3 cut(s)	760, 1317, 2019
AlwNI	CAGNNNCTG	1 cut(s)	2039
Ama87I	CYCGRG	1 cut(s)	1484
AoxI	GGCC	2 cut(s)	176, 2869
ApaLI	GTGCAC	2 cut(s)	715, 3111
ApeKI	GCWGC	8 cut(s)	10, 251, 1274, 1640, 1795, 2288, 2329, 2729
ApoI	RAATTY	8 cut(s)	115, 513, 729, 1559, 1721, 1948, 1975, 2912
ArsI	GACNNNNNNTTYG	2 cut(s)	293, 325
Asp700I	GAANNNNTTC	3 cut(s)	1863, 2029, 3006
AspLEI	GCGC	3 cut(s)	1365, 1680, 2099
AspS9I	GGNCC	5 cut(s)	314, 1714, 1936, 2365, 2834
AsuHPI	GGTGA	3 cut(s)	869, 1104, 2603
AsuII	TTCGAA	1 cut(s)	113
AvaI	CYCGRG	1 cut(s)	1484
AvaII	GGWCC	5 cut(s)	314, 1714, 1936, 2365, 2834
AxyI	CCTNAGG	1 cut(s)	1072
BaeGI	GKGCMC	2 cut(s)	719, 3115
BbsI	GAAGAC	1 cut(s)	1879
Bbv12I	GWGCWC	4 cut(s)	620, 719, 1017, 3115
BbvI	GCAGC	8 cut(s)	22, 238, 1261, 1627, 1807, 2275, 2316, 2716
BccI	CCATC	7 cut(s)	662, 932, 1127, 1691, 1916, 2953, 3044
BceAI	ACGGC	1 cut(s)	40
BcgI	CGANNNNNNTGC	4 cut(s)	79, 113, 782, 816
BciT130I	CCWGG	1 cut(s)	2510
BciVI	GTATCC	2 cut(s)	1701, 1846
BclI	TGATCA	3 cut(s)	343, 867, 1224
BcoDI	GTCTC	5 cut(s)	51, 360, 770, 1259, 3072
BfaI	CTAG	9 cut(s)	1007, 1631, 1877, 2189, 2312, 2349, 2403, 2633, 2985
BfmI	CTRYAG	4 cut(s)	252, 1443, 2001, 2420
BfrI	CTTAAG	2 cut(s)	2861, 3121
BfuAI	ACCTGC	1 cut(s)	148
BfuI	GTATCC	2 cut(s)	1701, 1846
BglII	AGATCT	2 cut(s)	94, 2761
BisI	GCNGC	9 cut(s)	11, 68, 252, 1275, 1641, 1796, 2289, 2330, 2730
BlpI	GCTNAGC	1 cut(s)	2093
BlsI	GCNGC	9 cut(s)	12, 69, 253, 1276, 1642, 1797, 2290, 2331, 2731
BmcAI	AGTACT	1 cut(s)	375
Bme1390I	CCNGG	1 cut(s)	2510
Bme18I	GGWCC	5 cut(s)	314, 1714, 1936, 2365, 2834
BmeT110I	CYCGRG	1 cut(s)	1484
BmgT120I	GGNCC	5 cut(s)	314, 1714, 1936, 2365, 2834
BmiI	GGNNCC	1 cut(s)	2836
BmrFI	CCNGG	1 cut(s)	2510
BmsI	GCATC	6 cut(s)	329, 472, 1652, 2210, 2794, 3002
BoxI	GACNNNNGTC	1 cut(s)	43
BpiI	GAAGAC	1 cut(s)	1879
BpmI	CTGGAG	3 cut(s)	834, 978, 2942
Bpu10I	CCTNAGC	1 cut(s)	534
Bpu1102I	GCTNAGC	1 cut(s)	2093
Bpu14I	TTCGAA	1 cut(s)	113
BpuEI	CTTGAG	4 cut(s)	398, 1241, 1535, 2598
BsaBI	GATNNNNATC	2 cut(s)	1314, 1701
BsaHI	GRCGYC	2 cut(s)	65, 147
BsaJI	CCNNGG	4 cut(s)	68, 1149, 1304, 1386
BsaXI	ACNNNNNCTCC	4 cut(s)	27, 57, 1784, 1814
Bsc4I	CCNNNNNNNGG	8 cut(s)	838, 1077, 1129, 1585, 2221, 2670, 2843, 2844
Bse118I	RCCGGY	1 cut(s)	211
Bse1I	ACTGG	7 cut(s)	45, 1716, 1726, 1923, 2205, 2367, 2925
Bse21I	CCTNAGG	1 cut(s)	1072
Bse3DI	GCAATG	3 cut(s)	235, 1350, 2988
Bse8I	GATNNNNATC	2 cut(s)	1314, 1701
BseBI	CCWGG	1 cut(s)	2510
BseDI	CCNNGG	4 cut(s)	68, 1149, 1304, 1386
BseGI	GGATG	7 cut(s)	1119, 1513, 1927, 2201, 2944, 2993, 3055
BseJI	GATNNNNATC	2 cut(s)	1314, 1701
BseLI	CCNNNNNNNGG	8 cut(s)	838, 1077, 1129, 1585, 2221, 2670, 2843, 2844
BseMI	GCAATG	3 cut(s)	235, 1350, 2988
BseNI	ACTGG	7 cut(s)	45, 1716, 1726, 1923, 2205, 2367, 2925
BseSI	GKGCMC	2 cut(s)	719, 3115
BseXI	GCAGC	8 cut(s)	22, 238, 1261, 1627, 1807, 2275, 2316, 2716
BsgI	GTGCAG	3 cut(s)	176, 376, 2715
Bsh1236I	CGCG	2 cut(s)	70, 2962
Bsh1285I	CGRYCG	2 cut(s)	74, 104
BshFI	GGCC	2 cut(s)	178, 2871
BsiEI	CGRYCG	2 cut(s)	74, 104
BsiHKAI	GWGCWC	4 cut(s)	620, 719, 1017, 3115
BsiHKCI	CYCGRG	1 cut(s)	1484
BsiSI	CCGG	1 cut(s)	212
BslFI	GGGAC	3 cut(s)	433, 1079, 2820
BslI	CCNNNNNNNGG	8 cut(s)	838, 1077, 1129, 1585, 2221, 2670, 2843, 2844
BsmAI	GTCTC	5 cut(s)	51, 360, 770, 1259, 3072
BsmBI	CGTCTC	2 cut(s)	1259, 3072
BsmFI	GGGAC	3 cut(s)	433, 1079, 2820
BsmI	GAATGC	3 cut(s)	1642, 2614, 2908
BsnI	GGCC	2 cut(s)	178, 2871
BsoBI	CYCGRG	1 cut(s)	1484
Bsp119I	TTCGAA	1 cut(s)	113
Bsp1286I	GDGCHC	4 cut(s)	620, 719, 1017, 3115
Bsp1720I	GCTNAGC	1 cut(s)	2093
BspACI	CCGC	8 cut(s)	68, 70, 107, 350, 678, 1349, 2844, 2960
BspANI	GGCC	2 cut(s)	178, 2871
BspFNI	CGCG	2 cut(s)	70, 2962
BspHI	TCATGA	1 cut(s)	1321
BspLI	GGNNCC	1 cut(s)	2836
BspMAI	CTGCAG	3 cut(s)	256, 1447, 2005
BspMI	ACCTGC	1 cut(s)	148
BspPI	GGATC	3 cut(s)	760, 1317, 2019
BspT104I	TTCGAA	1 cut(s)	113
BspTI	CTTAAG	2 cut(s)	2861, 3121
BsrDI	GCAATG	3 cut(s)	235, 1350, 2988
BsrFI	RCCGGY	1 cut(s)	211
BsrI	ACTGG	7 cut(s)	45, 1716, 1726, 1923, 2205, 2367, 2925
BssAI	RCCGGY	1 cut(s)	211
BssECI	CCNNGG	4 cut(s)	68, 1149, 1304, 1386
BssNI	GRCGYC	2 cut(s)	65, 147
BssT1I	CCWWGG	2 cut(s)	1149, 1386
Bst2UI	CCWGG	1 cut(s)	2510
Bst4CI	ACNGT	7 cut(s)	1166, 1253, 1768, 2151, 2170, 2239, 2256
Bst6I	CTCTTC	5 cut(s)	13, 699, 786, 2002, 2021
BstACI	GRCGYC	2 cut(s)	65, 147
BstAFI	CTTAAG	2 cut(s)	2861, 3121
BstAPI	GCANNNNNTGC	1 cut(s)	1166
BstBI	TTCGAA	1 cut(s)	113
BstC8I	GCNNGC	7 cut(s)	176, 977, 1533, 1608, 2199, 2334, 3069
BstDSI	CCRYGG	2 cut(s)	68, 1304
BstF5I	GGATG	7 cut(s)	1119, 1513, 1927, 2201, 2944, 2993, 3055
BstFNI	CGCG	2 cut(s)	70, 2962
BstHHI	GCGC	3 cut(s)	1365, 1680, 2099
BstMAI	GTCTC	5 cut(s)	51, 360, 770, 1259, 3072
BstMCI	CGRYCG	2 cut(s)	74, 104
BstMWI	GCNNNNNNNGC	8 cut(s)	67, 175, 539, 953, 1166, 2036, 2726, 3068
BstNI	CCWGG	1 cut(s)	2510
BstNSI	RCATGY	4 cut(s)	1095, 2105, 2197, 2201
BstPAI	GACNNNNGTC	1 cut(s)	43
BstSCI	CCNGG	1 cut(s)	2508
BstSFI	CTRYAG	4 cut(s)	252, 1443, 2001, 2420
BstSLI	GKGCMC	2 cut(s)	719, 3115
BstUI	CGCG	2 cut(s)	70, 2962
BstV1I	GCAGC	8 cut(s)	22, 238, 1261, 1627, 1807, 2275, 2316, 2716
BstV2I	GAAGAC	1 cut(s)	1879
BstX2I	RGATCY	4 cut(s)	94, 752, 2011, 2761
BstXI	CCANNNNNNTGG	1 cut(s)	2137
BstYI	RGATCY	4 cut(s)	94, 752, 2011, 2761
Bsu36I	CCTNAGG	1 cut(s)	1072
BsuI	GTATCC	2 cut(s)	1701, 1846
BsuRI	GGCC	2 cut(s)	178, 2871
BtgI	CCRYGG	2 cut(s)	68, 1304
BtsCI	GGATG	7 cut(s)	1119, 1513, 1927, 2201, 2944, 2993, 3055
BtsI	GCAGTG	5 cut(s)	1785, 1938, 2010, 2142, 3144
BtsIMutI	CAGTG	8 cut(s)	1773, 1785, 1916, 1938, 2010, 2142, 2895, 3144
BveI	ACCTGC	1 cut(s)	148
Cac8I	GCNNGC	7 cut(s)	176, 977, 1533, 1608, 2199, 2334, 3069
CaiI	CAGNNNCTG	1 cut(s)	2039
CciI	TCATGA	1 cut(s)	1321
CfoI	GCGC	3 cut(s)	1365, 1680, 2099
Cfr10I	RCCGGY	1 cut(s)	211
Cfr13I	GGNCC	5 cut(s)	314, 1714, 1936, 2365, 2834
Cfr42I	CCGCGG	1 cut(s)	71
CseI	GACGC	3 cut(s)	73, 136, 3089
Csp6I	GTAC	5 cut(s)	203, 374, 433, 768, 846
CviQI	GTAC	5 cut(s)	203, 374, 433, 768, 846
DraIII	CACNNNGTG	1 cut(s)	1166
DrdI	GACNNNNNNGTC	1 cut(s)	70
DseDI	GACNNNNNNGTC	1 cut(s)	70
Eam1104I	CTCTTC	5 cut(s)	13, 699, 786, 2002, 2021
EarI	CTCTTC	5 cut(s)	13, 699, 786, 2002, 2021
EciI	GGCGGA	2 cut(s)	122, 1364
Eco130I	CCWWGG	2 cut(s)	1149, 1386
Eco147I	AGGCCT	1 cut(s)	178
Eco32I	GATATC	1 cut(s)	1569
Eco47I	GGWCC	5 cut(s)	314, 1714, 1936, 2365, 2834
Eco57I	CTGAAG	4 cut(s)	1394, 2001, 2016, 2546
Eco81I	CCTNAGG	1 cut(s)	1072
Eco88I	CYCGRG	1 cut(s)	1484
EcoRI	GAATTC	1 cut(s)	115
EcoRII	CCWGG	1 cut(s)	2508
EcoRV	GATATC	1 cut(s)	1569
EcoT14I	CCWWGG	2 cut(s)	1149, 1386
EcoT22I	ATGCAT	3 cut(s)	1097, 2199, 2203
ErhI	CCWWGG	2 cut(s)	1149, 1386
Esp3I	CGTCTC	2 cut(s)	1259, 3072
FalI	AAGNNNNNCTT	2 cut(s)	2751, 2783
FaqI	GGGAC	3 cut(s)	433, 1079, 2820
FauI	CCCGC	1 cut(s)	2837
FbaI	TGATCA	3 cut(s)	343, 867, 1224
Fnu4HI	GCNGC	9 cut(s)	11, 68, 252, 1275, 1641, 1796, 2289, 2330, 2730
FokI	GGATG	7 cut(s)	1106, 1520, 1934, 2188, 2951, 2980, 3062
Fsp4HI	GCNGC	9 cut(s)	11, 68, 252, 1275, 1641, 1796, 2289, 2330, 2730
FspBI	CTAG	9 cut(s)	1007, 1631, 1877, 2189, 2312, 2349, 2403, 2633, 2985
GlaI	GCGC	3 cut(s)	1364, 1679, 2098
GluI	GCNGC	9 cut(s)	11, 68, 252, 1275, 1641, 1796, 2289, 2330, 2730
GsuI	CTGGAG	3 cut(s)	834, 978, 2942
HaeIII	GGCC	2 cut(s)	178, 2871
HapII	CCGG	1 cut(s)	212
HgaI	GACGC	3 cut(s)	73, 136, 3089
HhaI	GCGC	3 cut(s)	1365, 1680, 2099
Hin1I	GRCGYC	2 cut(s)	65, 147
Hin6I	GCGC	3 cut(s)	1363, 1678, 2097
HinP1I	GCGC	3 cut(s)	1363, 1678, 2097
HincII	GTYRAC	3 cut(s)	895, 1959, 2436
HindII	GTYRAC	3 cut(s)	895, 1959, 2436
HindIII	AAGCTT	1 cut(s)	973
HpaII	CCGG	1 cut(s)	212
HphI	GGTGA	3 cut(s)	869, 1104, 2603
Hpy99I	CGWCG	2 cut(s)	61, 124
HpyCH4III	ACNGT	7 cut(s)	1166, 1253, 1768, 2151, 2170, 2239, 2256
HpyCH4IV	ACGT	1 cut(s)	431
HpyF10VI	GCNNNNNNNGC	8 cut(s)	67, 175, 539, 953, 1166, 2036, 2726, 3068
HpySE526I	ACGT	1 cut(s)	431
Hsp92I	GRCGYC	2 cut(s)	65, 147
HspAI	GCGC	3 cut(s)	1363, 1678, 2097
Ksp22I	TGATCA	3 cut(s)	343, 867, 1224
KspI	CCGCGG	1 cut(s)	71
LmnI	GCTCC	3 cut(s)	449, 1405, 1792
Lsp1109I	GCAGC	8 cut(s)	22, 238, 1261, 1627, 1807, 2275, 2316, 2716
LweI	GCATC	6 cut(s)	329, 472, 1652, 2210, 2794, 3002
MaeI	CTAG	9 cut(s)	1007, 1631, 1877, 2189, 2312, 2349, 2403, 2633, 2985
MaeII	ACGT	1 cut(s)	431
MaeIII	GTNAC	4 cut(s)	559, 1728, 1780, 2164
MflI	RGATCY	4 cut(s)	94, 752, 2011, 2761
MhlI	GDGCHC	4 cut(s)	620, 719, 1017, 3115
MlyI	GAGTC	7 cut(s)	14, 772, 1061, 2179, 2627, 2654, 3007
Mph1103I	ATGCAT	3 cut(s)	1097, 2199, 2203
MroXI	GAANNNNTTC	3 cut(s)	1863, 2029, 3006
MseI	TTAA	9 cut(s)	837, 1197, 1548, 2052, 2210, 2379, 2862, 3122, 3153
MspA1I	CMGCKG	2 cut(s)	70, 773
MspCI	CTTAAG	2 cut(s)	2861, 3121
MspI	CCGG	1 cut(s)	212
MspR9I	CCNGG	1 cut(s)	2510
Mva1269I	GAATGC	3 cut(s)	1642, 2614, 2908
MvaI	CCWGG	1 cut(s)	2510
MvnI	CGCG	2 cut(s)	70, 2962
MwoI	GCNNNNNNNGC	8 cut(s)	67, 175, 539, 953, 1166, 2036, 2726, 3068
NlaIV	GGNNCC	1 cut(s)	2836
NmeAIII	GCCGAG	1 cut(s)	1357
NmuCI	GTSAC	3 cut(s)	559, 1728, 1780
NsiI	ATGCAT	3 cut(s)	1097, 2199, 2203
NspI	RCATGY	4 cut(s)	1095, 2105, 2197, 2201
NspV	TTCGAA	1 cut(s)	113
PaeI	GCATGC	1 cut(s)	2201
PaeR7I	CTCGAG	1 cut(s)	1484
PagI	TCATGA	1 cut(s)	1321
PceI	AGGCCT	1 cut(s)	178
PcsI	WCGNNNNNNNCGW	4 cut(s)	71, 110, 119, 428
PctI	GAATGC	3 cut(s)	1642, 2614, 2908
PdmI	GAANNNNTTC	3 cut(s)	1863, 2029, 3006
PfeI	GAWTC	8 cut(s)	110, 886, 1376, 1382, 1702, 2447, 2498, 3128
PflFI	GACNNNGTC	1 cut(s)	305
PflMI	CCANNNNNTGG	2 cut(s)	1129, 2221
PkrI	GCNGC	9 cut(s)	12, 69, 253, 1276, 1642, 1797, 2290, 2331, 2731
Ple19I	CGATCG	1 cut(s)	104
PleI	GAGTC	7 cut(s)	13, 772, 1061, 2179, 2626, 2654, 3007
PpsI	GAGTC	7 cut(s)	13, 772, 1061, 2179, 2626, 2654, 3007
PshAI	GACNNNNGTC	1 cut(s)	43
PsiI	TTATAA	1 cut(s)	735
Psp6I	CCWGG	1 cut(s)	2508
PspGI	CCWGG	1 cut(s)	2508
PspN4I	GGNNCC	1 cut(s)	2836
PspPI	GGNCC	5 cut(s)	314, 1714, 1936, 2365, 2834
PspXI	VCTCGAGB	1 cut(s)	1484
PstI	CTGCAG	3 cut(s)	256, 1447, 2005
PstNI	CAGNNNCTG	1 cut(s)	2039
PsuI	RGATCY	4 cut(s)	94, 752, 2011, 2761
PsyI	GACNNNGTC	1 cut(s)	305
PvuI	CGATCG	1 cut(s)	104
PvuII	CAGCTG	1 cut(s)	773
RsaI	GTAC	5 cut(s)	204, 375, 434, 769, 847
RsaNI	GTAC	5 cut(s)	203, 374, 433, 768, 846
SacII	CCGCGG	1 cut(s)	71
SaqAI	TTAA	9 cut(s)	837, 1197, 1548, 2052, 2210, 2379, 2862, 3122, 3153
SatI	GCNGC	9 cut(s)	11, 68, 252, 1275, 1641, 1796, 2289, 2330, 2730
Sau96I	GGNCC	5 cut(s)	314, 1714, 1936, 2365, 2834
ScaI	AGTACT	1 cut(s)	375
SchI	GAGTC	7 cut(s)	14, 772, 1061, 2179, 2627, 2654, 3007
ScrFI	CCNGG	1 cut(s)	2510
SduI	GDGCHC	4 cut(s)	620, 719, 1017, 3115
SfaNI	GCATC	6 cut(s)	329, 472, 1652, 2210, 2794, 3002
SfcI	CTRYAG	4 cut(s)	252, 1443, 2001, 2420
Sfr274I	CTCGAG	1 cut(s)	1484
Sfr303I	CCGCGG	1 cut(s)	71
SfuI	TTCGAA	1 cut(s)	113
SgrBI	CCGCGG	1 cut(s)	71
SinI	GGWCC	5 cut(s)	314, 1714, 1936, 2365, 2834
SlaI	CTCGAG	1 cut(s)	1484
SmlI	CTYRAG	7 cut(s)	377, 1256, 1484, 1514, 2613, 2861, 3121
SmoI	CTYRAG	7 cut(s)	377, 1256, 1484, 1514, 2613, 2861, 3121
SphI	GCATGC	1 cut(s)	2201
SseBI	AGGCCT	1 cut(s)	178
SsiI	CCGC	8 cut(s)	68, 70, 107, 350, 678, 1349, 2844, 2960
SspI	AATATT	1 cut(s)	2884
SspMI	CTAG	9 cut(s)	1007, 1631, 1877, 2189, 2312, 2349, 2403, 2633, 2985
StuI	AGGCCT	1 cut(s)	178
StyD4I	CCNGG	1 cut(s)	2508
StyI	CCWWGG	2 cut(s)	1149, 1386
TaaI	ACNGT	7 cut(s)	1166, 1253, 1768, 2151, 2170, 2239, 2256
TaiI	ACGT	1 cut(s)	434
TaqI	TCGA	8 cut(s)	74, 113, 119, 300, 1485, 1621, 1867, 2889
TaqII	GACCGA	1 cut(s)	2822
TatI	WGTACW	2 cut(s)	373, 845
TauI	GCSGC	1 cut(s)	70
TfiI	GAWTC	8 cut(s)	110, 886, 1376, 1382, 1702, 2447, 2498, 3128
Tru1I	TTAA	9 cut(s)	837, 1197, 1548, 2052, 2210, 2379, 2862, 3122, 3153
Tru9I	TTAA	9 cut(s)	837, 1197, 1548, 2052, 2210, 2379, 2862, 3122, 3153
TscAI	CASTG	8 cut(s)	1773, 1785, 1923, 1938, 2010, 2142, 2902, 3151
TseFI	GTSAC	3 cut(s)	559, 1728, 1780
TseI	GCWGC	8 cut(s)	10, 251, 1274, 1640, 1795, 2288, 2329, 2729
Tsp45I	GTSAC	3 cut(s)	559, 1728, 1780
TspGWI	ACGGA	1 cut(s)	2696
TspRI	CASTG	8 cut(s)	1773, 1785, 1923, 1938, 2010, 2142, 2902, 3151
Tth111I	GACNNNGTC	1 cut(s)	305
Van91I	CCANNNNNTGG	2 cut(s)	1129, 2221
Vha464I	CTTAAG	2 cut(s)	2861, 3121
VneI	GTGCAC	2 cut(s)	715, 3111
VpaK11BI	GGWCC	5 cut(s)	314, 1714, 1936, 2365, 2834
XapI	RAATTY	8 cut(s)	115, 513, 729, 1559, 1721, 1948, 1975, 2912
XbaI	TCTAGA	2 cut(s)	2188, 2632
XceI	RCATGY	4 cut(s)	1095, 2105, 2197, 2201
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1126, 2807
XhoI	CTCGAG	1 cut(s)	1484
XmnI	GAANNNNTTC	3 cut(s)	1863, 2029, 3006
XspI	CTAG	9 cut(s)	1007, 1631, 1877, 2189, 2312, 2349, 2403, 2633, 2985
ZrmI	AGTACT	1 cut(s)	375
Zsp2I	ATGCAT	3 cut(s)	1097, 2199, 2203

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.