Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0009274

Physical Location & Seq

Genomic Coordinates Reverse (-)

67628378 .. 67633879

Gene Structure 5502 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G038370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3198 bp

ATGGAGTCGCAGCAGAGAAGAGGAGGAGGAGGAGGAGGATTGGTGTCGCTATCGCCGTCGCAGACGCCGCGGTCGAGCGACAAGTCGGCGAGAGATCTGCGATCGGCGGATTCGAATTCGACGAACAGGCATGAGAAAGAGAAGGGCGTCAATGTGCAGGTTCTTGTGCGCTGCAGGCCTTTGAGTGAAGATGAAAGTAGGGTACATACGCCGGTTGTGATTTCTTGCAATGAGAATAGAAGGGAAGTGGCTGCAGTTCAGAGTATTGCTAACAAGCAGATTGATAGAACCTTTGCCTTCGATAAGGTCTTTGGTCCAGCGTCAGAACAGAAGGAATTGTATGATCAGGCTGTGTCTCCTATTGTGAACGAAGTACTTGAGGGGTATAACTGCACTATCTTTGCGTATGGTCAGACAGGGACGGGAAAGACGTACACAATGGAAGGAGGAGCAAGAAAGAAGAATGGGGAGTTTCCAAGTGATGCTGGTGTTATCCCAAGAGCTGTGAAACAAATTTTTGACATATTAGAAGCTCAGGTTGCTGAGTATAGCATGAAAGTCACTTTTTTAGAGCTGTATAATGAGGAGATAACTGATCTGTTGGCTTTAGAGGAGAGCACAAAGTTTATAGATGACAAAACTAAGAAACCGATAGCTCTCATGGAAGATGGAAAAGGCGGTGTTTTTGTGAGAGGCTTGGAAGAAGAGATAGTGTGCACAGCAAATGAAATTTATAAAATCTTGGAGAAAGGATCTGCAAAAAGGCGTACAGCTGAGACTCTTCTCAACAAGCAAAGTAGTCGTTCACACTCTATATTTTCAATCACAATCCACATTAAGGAATGTACTCCAGAGGGTGAAGAAATGATCAAGTGTGGGAAGCTGAATCTTGTTGACCTTGCTGGTTCAGAGAACATTTCTCGCTCTGGTGCAAGAGATGGCAGAGCAAGGGAAGCTGGAGAGATAAATAAAAGCTTGCTTACTCTTGGTCGTGTCATAAATGCTCTAGTTGAGCACTCTGGTCATATTCCATATAGGGATAGTAAACTAACAAGATTATTGAGGGACTCCTTAGGAGGGAAAACCAAGACATGCATAATAGCTACCATATCACCCTCCATCCATTGTTTGGAAGAAACACTCAGCACCTTGGACTATGCACACCGTGCCAAGAATATAAAGAATAAACCAGAGGTTAATCAAAAGATGATGAAATCAGCTTTGATCAAGGATTTATATACTGAAATTGATCGTCTCAAGCAAGATTTTCTTAGTGGGTATGACATGTTTCTTGTGCTCATTCAGAGGTATATGCTGCAAGAGAGAAGAACGGTATCTATACCACGGGATCGGTATCTTCATGAAGAAGCCGAGAAGAAGGCAATGGCGGAAAAGATAGAGCGCATGGAACTTGAATCTGAATCCAAAGACAAGGTATCATTGGAGCTTCAGGAACTTTACAATTCTCAGCAACTTTTGACTGCAGAATTGACTGATAAACTTGAAAAAACTGAGAAAAAGCTTGAGGAAACTGAACATTCATTGGATGATCTTGAGGAAAAACAGCGGCAGGCAAATGCGACCATTAAAGAGAAGGAATTTCTGATATCAAATCTCCTCAAATCGGAGAAATCACTTGTTGAGCGTGCATTTGAGCTTCGAGCAGAGCTAGAGAATGCTGCATCAGATGTGTCCAATTTATTTTCCAAAATTGAGCGCAAGGATAAAATTGAAGATGGGAATCGGATACTGGTCCAGAAATTCCAGTCACAGCTAACTCAACAGCTTGAAATCTTGCATAAGACAGTGGCAGTTGCAGTGACACAACAGGAGCAGCAGTTGAAGGATATGGAAGAAGATATGCAGTCATTTGTATCCACAAAGGCAGAGGCTACCGAAGAACTTCGAGGAAGACTAGGAAAGCTGAAAAAAATGTATGGTTCTGGTATCAAGACACTGGATGGTATAGCGGTGGACCTTGAAGGAAATTCTCAGTCAACTTTTTGTCATCTAAATACTGAAGTTTCTAACCACTCTTCTGCAGTGGAGGATCTCTTCAAAGGAATTGCTTCAGAAGCTGATGAATTACTTAATGATCTTCAAAGTAATCTTCACAAGCAAGAGGAGAAGCTAAGCGCACATGCACAACAACAGCGTGAGGCTCATGCCAGAGCAGTGGAAATGGCACGGTCAGTTTCTAAAGTTACTGTGGACTTCTTCAAGACTCTAGACATGCATGCATCCAGTTTAAGCCAAATTGTGGAAGAAGCACAAACTGTCAATGATAAGAAACTGTCTGAGCTTGAAGAAAAGTTTGAGGAGTGTGCTGCTAATGAAGAAAGGCAGTTGCTAGAAAAAGTGGCAGAGCTGCTGGCAAGTTCAAATGCTAGGAAGAAAAGACTGGTCCAAACAGCAGTTAATGACCTTCGGGAGAGTGCAACTAGCAGAACCAACAAGCTACAGCAAGAAATGTCAACCATGCAAGATTCTACTTCTTCTATCAAAGCAAAATGGACAATTCACATGGAAAAGACAGAATCTCATTACCTGGAAGATACATCTGCTGTGGAATGTGGAAAGAAAGACATGGAGGAGGTTCTTCAGAATTGTTTGAACAAGGCAAAAATGGGTGAACAACAATGGAAGAATGCTCAAGAGTCCTTGCTAAGTCTAGAAAAGAAAAATGTTGCTTCTGTGGACTCCATTGTTAGGAGGGGAACGGAAGCCAATCAAGTTCTACGGGAAAGGTTTTCCTCTGCTGTTTCGGCTGCACTTGAAGATGTAGATGTTGCAGACAAAGATCTCCTTTCTTCTATTGACCATTCATTACAACTTGACCATGATGCTTGTGGAAACCTAAACTCAACTATCGGTCCCTGTTGCGGGGATTTGAGGGAACTTAAGGGAGGCCACTACCACAATATTGTCGAAATCACTGAGAATGCAGGAAAATTTCTACTCGAGGAATATGTGGTGGATGAACCATCGTGTTCCACACCGCGAAAGAGGTCATTCAATCTTCCTAGCATTGCATCCATTGAAGAACTTCGGACTCCTGCTTTTGAGGACTTGTTGAGATCATTCTGGGATGGAAGATCGGCAAAGCAGGCAAATGGAGACGCAAAACATCTTGCAGGGGCTTATGAGGGTGCACAATCCTTAAGAGATTCCAGACTTCCTCTCACTGCTATTAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000281 GO:0000902 GO:0000910 GO:0000911 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005819 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005886 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0008150 GO:0008574 GO:0009653 GO:0009826 GO:0009987 GO:0015630 GO:0016020 GO:0016043 GO:0016049 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0030865 GO:0031122 GO:0032502 GO:0032506 GO:0032989 GO:0032991 GO:0040007 GO:0042623 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043622 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0048589 GO:0048856 GO:0048869 GO:0051301 GO:0060560 GO:0061640 GO:0071840 GO:0071944 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:1902410 GO:1902850 GO:1903047 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

1065

Amino Acids

119.37

Weight (kDa)

5.55

Isoelectric Point (pI)

55.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	51 - 201	3.2e-28	Microtubule binding
Kinesin	PF00225	57 - 393	2.8e-116	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009274)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28620 AT2G28620 AT2G28620 AT3G45850 AT3G45850
fragaria_vesca	FvH4_3g34440 FvH4_3g34440
malus_domestica	MD03G1105700.v1.1 MD11G1118200.v1.1
prunus_persica	Prupe.6G088500_v2.0.a1
pyrus_communis	pycom03g08490 pycom11g09910
rosa_chinensis	RchiOBHm_Chr5g0062081
rosa_laevigata	RLG00000035530
rosa_multiflora	Rmu_sc0002296.1_g000013
rosa_roxburghii	Rroxscaffold_1G00018630
rosa_rugosa	Rorug05G0345900 Rorug05G0345900
rosa_samantha	Rh5AG407500 Rh5BG420800 Rh5DG435900
rosa_wichuraiana	Rw5G038370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	735
AasI	GACNNNNNNGTC	1 cut(s)	70
Acc36I	ACCTGC	1 cut(s)	148
AccB7I	CCANNNNNTGG	2 cut(s)	1129, 2260
AccII	CGCG	2 cut(s)	70, 3001
AciI	CCGC	9 cut(s)	68, 70, 107, 678, 1388, 1567, 1970, 2883, 2999
AclWI	GGATC	3 cut(s)	760, 1356, 2058
AcsI	RAATTY	7 cut(s)	115, 513, 729, 1598, 1760, 1987, 2951
AcuI	CTGAAG	4 cut(s)	1433, 2040, 2055, 2585
AcyI	GRCGYC	2 cut(s)	65, 147
AdeI	CACNNNGTG	1 cut(s)	1166
AfaI	GTAC	5 cut(s)	204, 375, 434, 769, 847
AfiI	CCNNNNNNNGG	8 cut(s)	838, 1077, 1129, 1624, 2260, 2709, 2882, 2883
AflII	CTTAAG	2 cut(s)	2900, 3160
AflIII	ACRYGT	1 cut(s)	1284
AjnI	CCWGG	1 cut(s)	2547
Alw21I	GWGCWC	5 cut(s)	620, 719, 1017, 1299, 3154
Alw26I	GTCTC	4 cut(s)	360, 770, 1259, 3111
Alw44I	GTGCAC	2 cut(s)	715, 3150
AlwI	GGATC	3 cut(s)	760, 1356, 2058
AlwNI	CAGNNNCTG	1 cut(s)	2078
Ama87I	CYCGRG	1 cut(s)	2960
AoxI	GGCC	2 cut(s)	176, 2908
ApaLI	GTGCAC	2 cut(s)	715, 3150
ApeKI	GCWGC	9 cut(s)	10, 171, 251, 1315, 1679, 1834, 2327, 2368, 2768
ApoI	RAATTY	7 cut(s)	115, 513, 729, 1598, 1760, 1987, 2951
Asp700I	GAANNNNTTC	3 cut(s)	1902, 2068, 3045
AspLEI	GCGC	4 cut(s)	171, 1404, 1719, 2138
AspS9I	GGNCC	5 cut(s)	314, 1753, 1975, 2404, 2873
AsuHPI	GGTGA	3 cut(s)	869, 1104, 2642
AsuII	TTCGAA	1 cut(s)	113
AvaI	CYCGRG	1 cut(s)	2960
AvaII	GGWCC	5 cut(s)	314, 1753, 1975, 2404, 2873
AxyI	CCTNAGG	1 cut(s)	1072
BaeGI	GKGCMC	2 cut(s)	719, 3154
BbsI	GAAGAC	1 cut(s)	1918
Bbv12I	GWGCWC	5 cut(s)	620, 719, 1017, 1299, 3154
BbvI	GCAGC	9 cut(s)	22, 158, 238, 1302, 1666, 1846, 2314, 2355, 2755
BccI	CCATC	7 cut(s)	662, 932, 1127, 1730, 1955, 2992, 3083
BceAI	ACGGC	1 cut(s)	40
BcgI	CGANNNNNNTGC	4 cut(s)	79, 113, 782, 816
BciT130I	CCWGG	1 cut(s)	2549
BciVI	GTATCC	2 cut(s)	1740, 1885
BclI	TGATCA	3 cut(s)	343, 867, 1224
BcoDI	GTCTC	4 cut(s)	360, 770, 1259, 3111
BfaI	CTAG	9 cut(s)	1007, 1670, 1916, 2228, 2351, 2388, 2442, 2672, 3024
BfmI	CTRYAG	5 cut(s)	172, 252, 1482, 2040, 2459
BfrI	CTTAAG	2 cut(s)	2900, 3160
BfuAI	ACCTGC	1 cut(s)	148
BfuI	GTATCC	2 cut(s)	1740, 1885
BglII	AGATCT	2 cut(s)	94, 2800
BlpI	GCTNAGC	1 cut(s)	2132
BmcAI	AGTACT	1 cut(s)	375
Bme1390I	CCNGG	1 cut(s)	2549
Bme18I	GGWCC	5 cut(s)	314, 1753, 1975, 2404, 2873
BmeT110I	CYCGRG	1 cut(s)	2960
BmgT120I	GGNCC	5 cut(s)	314, 1753, 1975, 2404, 2873
BmiI	GGNNCC	1 cut(s)	2875
BmrFI	CCNGG	1 cut(s)	2549
BmsI	GCATC	5 cut(s)	472, 1691, 2249, 2833, 3041
BpiI	GAAGAC	1 cut(s)	1918
BpmI	CTGGAG	2 cut(s)	834, 978
Bpu10I	CCTNAGC	1 cut(s)	534
Bpu1102I	GCTNAGC	1 cut(s)	2132
Bpu14I	TTCGAA	1 cut(s)	113
BpuEI	CTTGAG	5 cut(s)	398, 1241, 1544, 1574, 2637
BsaBI	GATNNNNATC	2 cut(s)	1353, 1740
BsaHI	GRCGYC	2 cut(s)	65, 147
BsaJI	CCNNGG	3 cut(s)	68, 1149, 1343
BsaXI	ACNNNNNCTCC	4 cut(s)	27, 57, 1823, 1853
Bsc4I	CCNNNNNNNGG	8 cut(s)	838, 1077, 1129, 1624, 2260, 2709, 2882, 2883
Bse118I	RCCGGY	1 cut(s)	211
Bse1I	ACTGG	5 cut(s)	1755, 1765, 1962, 2244, 2406
Bse21I	CCTNAGG	1 cut(s)	1072
Bse3DI	GCAATG	3 cut(s)	235, 1389, 3027
Bse8I	GATNNNNATC	2 cut(s)	1353, 1740
BseBI	CCWGG	1 cut(s)	2549
BseDI	CCNNGG	3 cut(s)	68, 1149, 1343
BseGI	GGATG	7 cut(s)	1119, 1552, 1966, 2240, 2983, 3032, 3094
BseJI	GATNNNNATC	2 cut(s)	1353, 1740
BseLI	CCNNNNNNNGG	8 cut(s)	838, 1077, 1129, 1624, 2260, 2709, 2882, 2883
BseMI	GCAATG	3 cut(s)	235, 1389, 3027
BseMII	CTCAG	9 cut(s)	534, 548, 765, 1156, 1481, 1503, 2006, 2289, 2928
BseNI	ACTGG	5 cut(s)	1755, 1765, 1962, 2244, 2406
BseSI	GKGCMC	2 cut(s)	719, 3154
BseXI	GCAGC	9 cut(s)	22, 158, 238, 1302, 1666, 1846, 2314, 2355, 2755
BsgI	GTGCAG	3 cut(s)	176, 376, 2754
Bsh1236I	CGCG	2 cut(s)	70, 3001
Bsh1285I	CGRYCG	2 cut(s)	74, 104
BshFI	GGCC	2 cut(s)	178, 2910
BsiEI	CGRYCG	2 cut(s)	74, 104
BsiHKAI	GWGCWC	5 cut(s)	620, 719, 1017, 1299, 3154
BsiHKCI	CYCGRG	1 cut(s)	2960
BsiSI	CCGG	1 cut(s)	212
BslFI	GGGAC	3 cut(s)	433, 1079, 2859
BslI	CCNNNNNNNGG	8 cut(s)	838, 1077, 1129, 1624, 2260, 2709, 2882, 2883
BsmAI	GTCTC	4 cut(s)	360, 770, 1259, 3111
BsmBI	CGTCTC	2 cut(s)	1259, 3111
BsmFI	GGGAC	3 cut(s)	433, 1079, 2859
BsmI	GAATGC	3 cut(s)	1681, 2653, 2947
BsnI	GGCC	2 cut(s)	178, 2910
BsoBI	CYCGRG	1 cut(s)	2960
Bsp119I	TTCGAA	1 cut(s)	113
Bsp1286I	GDGCHC	5 cut(s)	620, 719, 1017, 1299, 3154
Bsp1720I	GCTNAGC	1 cut(s)	2132
BspACI	CCGC	9 cut(s)	68, 70, 107, 678, 1388, 1567, 1970, 2883, 2999
BspANI	GGCC	2 cut(s)	178, 2910
BspCNI	CTCAG	9 cut(s)	535, 547, 766, 1155, 1480, 1504, 2005, 2290, 2929
BspFNI	CGCG	2 cut(s)	70, 3001
BspHI	TCATGA	1 cut(s)	1360
BspLI	GGNNCC	1 cut(s)	2875
BspMAI	CTGCAG	4 cut(s)	176, 256, 1486, 2044
BspMI	ACCTGC	1 cut(s)	148
BspPI	GGATC	3 cut(s)	760, 1356, 2058
BspT104I	TTCGAA	1 cut(s)	113
BspTI	CTTAAG	2 cut(s)	2900, 3160
BsrDI	GCAATG	3 cut(s)	235, 1389, 3027
BsrFI	RCCGGY	1 cut(s)	211
BsrI	ACTGG	5 cut(s)	1755, 1765, 1962, 2244, 2406
BssAI	RCCGGY	1 cut(s)	211
BssECI	CCNNGG	3 cut(s)	68, 1149, 1343
BssNI	GRCGYC	2 cut(s)	65, 147
BssT1I	CCWWGG	1 cut(s)	1149
Bst2UI	CCWGG	1 cut(s)	2549
Bst4CI	ACNGT	7 cut(s)	1166, 1333, 1807, 2190, 2209, 2278, 2295
Bst6I	CTCTTC	5 cut(s)	13, 699, 786, 2041, 2060
BstACI	GRCGYC	2 cut(s)	65, 147
BstAFI	CTTAAG	2 cut(s)	2900, 3160
BstAPI	GCANNNNNTGC	1 cut(s)	1166
BstBI	TTCGAA	1 cut(s)	113
BstC8I	GCNNGC	7 cut(s)	176, 977, 1572, 1647, 2238, 2373, 3108
BstDSI	CCRYGG	2 cut(s)	68, 1343
BstF5I	GGATG	7 cut(s)	1119, 1552, 1966, 2240, 2983, 3032, 3094
BstFNI	CGCG	2 cut(s)	70, 3001
BstHHI	GCGC	4 cut(s)	171, 1404, 1719, 2138
BstMAI	GTCTC	4 cut(s)	360, 770, 1259, 3111
BstMCI	CGRYCG	2 cut(s)	74, 104
BstMWI	GCNNNNNNNGC	8 cut(s)	67, 175, 539, 953, 1166, 2075, 2765, 3107
BstNI	CCWGG	1 cut(s)	2549
BstNSI	RCATGY	5 cut(s)	1095, 1288, 2144, 2236, 2240
BstSCI	CCNGG	1 cut(s)	2547
BstSFI	CTRYAG	5 cut(s)	172, 252, 1482, 2040, 2459
BstSLI	GKGCMC	2 cut(s)	719, 3154
BstUI	CGCG	2 cut(s)	70, 3001
BstV1I	GCAGC	9 cut(s)	22, 158, 238, 1302, 1666, 1846, 2314, 2355, 2755
BstV2I	GAAGAC	1 cut(s)	1918
BstX2I	RGATCY	4 cut(s)	94, 752, 2050, 2800
BstXI	CCANNNNNNTGG	1 cut(s)	2176
BstYI	RGATCY	4 cut(s)	94, 752, 2050, 2800
Bsu36I	CCTNAGG	1 cut(s)	1072
BsuI	GTATCC	2 cut(s)	1740, 1885
BsuRI	GGCC	2 cut(s)	178, 2910
BtgI	CCRYGG	2 cut(s)	68, 1343
BtsCI	GGATG	7 cut(s)	1119, 1552, 1966, 2240, 2983, 3032, 3094
BtsI	GCAGTG	4 cut(s)	1824, 2049, 2181, 3183
BtsIMutI	CAGTG	7 cut(s)	1812, 1824, 1955, 2049, 2181, 2934, 3183
BveI	ACCTGC	1 cut(s)	148
Cac8I	GCNNGC	7 cut(s)	176, 977, 1572, 1647, 2238, 2373, 3108
CaiI	CAGNNNCTG	1 cut(s)	2078
CciI	TCATGA	1 cut(s)	1360
CfoI	GCGC	4 cut(s)	171, 1404, 1719, 2138
Cfr10I	RCCGGY	1 cut(s)	211
Cfr13I	GGNCC	5 cut(s)	314, 1753, 1975, 2404, 2873
Cfr42I	CCGCGG	1 cut(s)	71
CseI	GACGC	4 cut(s)	73, 136, 309, 3128
Csp6I	GTAC	5 cut(s)	203, 374, 433, 768, 846
CviQI	GTAC	5 cut(s)	203, 374, 433, 768, 846
DraIII	CACNNNGTG	1 cut(s)	1166
DrdI	GACNNNNNNGTC	1 cut(s)	70
DseDI	GACNNNNNNGTC	1 cut(s)	70
Eam1104I	CTCTTC	5 cut(s)	13, 699, 786, 2041, 2060
EarI	CTCTTC	5 cut(s)	13, 699, 786, 2041, 2060
EciI	GGCGGA	2 cut(s)	122, 1403
Eco130I	CCWWGG	1 cut(s)	1149
Eco147I	AGGCCT	1 cut(s)	178
Eco32I	GATATC	1 cut(s)	1608
Eco47I	GGWCC	5 cut(s)	314, 1753, 1975, 2404, 2873
Eco57I	CTGAAG	4 cut(s)	1433, 2040, 2055, 2585
Eco81I	CCTNAGG	1 cut(s)	1072
Eco88I	CYCGRG	1 cut(s)	2960
EcoRI	GAATTC	1 cut(s)	115
EcoRII	CCWGG	1 cut(s)	2547
EcoRV	GATATC	1 cut(s)	1608
EcoT14I	CCWWGG	1 cut(s)	1149
EcoT22I	ATGCAT	3 cut(s)	1097, 2238, 2242
ErhI	CCWWGG	1 cut(s)	1149
Esp3I	CGTCTC	2 cut(s)	1259, 3111
FalI	AAGNNNNNCTT	4 cut(s)	1254, 1286, 2790, 2822
FaqI	GGGAC	3 cut(s)	433, 1079, 2859
FauI	CCCGC	1 cut(s)	2876
FbaI	TGATCA	3 cut(s)	343, 867, 1224
FokI	GGATG	7 cut(s)	1106, 1559, 1973, 2227, 2990, 3019, 3101
FspBI	CTAG	9 cut(s)	1007, 1670, 1916, 2228, 2351, 2388, 2442, 2672, 3024
GlaI	GCGC	4 cut(s)	170, 1403, 1718, 2137
GsuI	CTGGAG	2 cut(s)	834, 978
HaeIII	GGCC	2 cut(s)	178, 2910
HapII	CCGG	1 cut(s)	212
HgaI	GACGC	4 cut(s)	73, 136, 309, 3128
HhaI	GCGC	4 cut(s)	171, 1404, 1719, 2138
Hin1I	GRCGYC	2 cut(s)	65, 147
Hin6I	GCGC	4 cut(s)	169, 1402, 1717, 2136
HinP1I	GCGC	4 cut(s)	169, 1402, 1717, 2136
HincII	GTYRAC	3 cut(s)	895, 1998, 2475
HindII	GTYRAC	3 cut(s)	895, 1998, 2475
HindIII	AAGCTT	2 cut(s)	973, 1520
HpaII	CCGG	1 cut(s)	212
HphI	GGTGA	3 cut(s)	869, 1104, 2642
Hpy99I	CGWCG	2 cut(s)	61, 124
HpyCH4III	ACNGT	7 cut(s)	1166, 1333, 1807, 2190, 2209, 2278, 2295
HpyCH4IV	ACGT	1 cut(s)	431
HpyF10VI	GCNNNNNNNGC	8 cut(s)	67, 175, 539, 953, 1166, 2075, 2765, 3107
HpySE526I	ACGT	1 cut(s)	431
Hsp92I	GRCGYC	2 cut(s)	65, 147
HspAI	GCGC	4 cut(s)	169, 1402, 1717, 2136
Ksp22I	TGATCA	3 cut(s)	343, 867, 1224
KspI	CCGCGG	1 cut(s)	71
LmnI	GCTCC	3 cut(s)	449, 1444, 1831
Lsp1109I	GCAGC	9 cut(s)	22, 158, 238, 1302, 1666, 1846, 2314, 2355, 2755
LweI	GCATC	5 cut(s)	472, 1691, 2249, 2833, 3041
MaeI	CTAG	9 cut(s)	1007, 1670, 1916, 2228, 2351, 2388, 2442, 2672, 3024
MaeII	ACGT	1 cut(s)	431
MaeIII	GTNAC	4 cut(s)	559, 1767, 1819, 2203
MflI	RGATCY	4 cut(s)	94, 752, 2050, 2800
MhlI	GDGCHC	5 cut(s)	620, 719, 1017, 1299, 3154
MlyI	GAGTC	7 cut(s)	14, 772, 1061, 2218, 2666, 2693, 3046
Mph1103I	ATGCAT	3 cut(s)	1097, 2238, 2242
MroXI	GAANNNNTTC	3 cut(s)	1902, 2068, 3045
MseI	TTAA	9 cut(s)	837, 1197, 1587, 2091, 2249, 2418, 2901, 3161, 3192
MspA1I	CMGCKG	3 cut(s)	70, 773, 1567
MspCI	CTTAAG	2 cut(s)	2900, 3160
MspI	CCGG	1 cut(s)	212
MspR9I	CCNGG	1 cut(s)	2549
Mva1269I	GAATGC	3 cut(s)	1681, 2653, 2947
MvaI	CCWGG	1 cut(s)	2549
MvnI	CGCG	2 cut(s)	70, 3001
MwoI	GCNNNNNNNGC	8 cut(s)	67, 175, 539, 953, 1166, 2075, 2765, 3107
NlaIV	GGNNCC	1 cut(s)	2875
NmeAIII	GCCGAG	1 cut(s)	1396
NmuCI	GTSAC	3 cut(s)	559, 1767, 1819
NsiI	ATGCAT	3 cut(s)	1097, 2238, 2242
NspI	RCATGY	5 cut(s)	1095, 1288, 2144, 2236, 2240
NspV	TTCGAA	1 cut(s)	113
PaeI	GCATGC	1 cut(s)	2240
PaeR7I	CTCGAG	1 cut(s)	2960
PagI	TCATGA	1 cut(s)	1360
PceI	AGGCCT	1 cut(s)	178
PciI	ACATGT	1 cut(s)	1284
PcsI	WCGNNNNNNNCGW	5 cut(s)	53, 71, 110, 119, 428
PctI	GAATGC	3 cut(s)	1681, 2653, 2947
PdmI	GAANNNNTTC	3 cut(s)	1902, 2068, 3045
PfeI	GAWTC	8 cut(s)	110, 886, 1415, 1421, 1741, 2486, 2537, 3167
PflMI	CCANNNNNTGG	2 cut(s)	1129, 2260
Ple19I	CGATCG	1 cut(s)	104
PleI	GAGTC	7 cut(s)	13, 772, 1061, 2218, 2665, 2693, 3046
PpsI	GAGTC	7 cut(s)	13, 772, 1061, 2218, 2665, 2693, 3046
PscI	ACATGT	1 cut(s)	1284
PsiI	TTATAA	1 cut(s)	735
Psp6I	CCWGG	1 cut(s)	2547
PspGI	CCWGG	1 cut(s)	2547
PspN4I	GGNNCC	1 cut(s)	2875
PspPI	GGNCC	5 cut(s)	314, 1753, 1975, 2404, 2873
PspXI	VCTCGAGB	1 cut(s)	2960
PstI	CTGCAG	4 cut(s)	176, 256, 1486, 2044
PstNI	CAGNNNCTG	1 cut(s)	2078
PsuI	RGATCY	4 cut(s)	94, 752, 2050, 2800
PvuI	CGATCG	1 cut(s)	104
PvuII	CAGCTG	1 cut(s)	773
RsaI	GTAC	5 cut(s)	204, 375, 434, 769, 847
RsaNI	GTAC	5 cut(s)	203, 374, 433, 768, 846
SacII	CCGCGG	1 cut(s)	71
SaqAI	TTAA	9 cut(s)	837, 1197, 1587, 2091, 2249, 2418, 2901, 3161, 3192
Sau96I	GGNCC	5 cut(s)	314, 1753, 1975, 2404, 2873
ScaI	AGTACT	1 cut(s)	375
SchI	GAGTC	7 cut(s)	14, 772, 1061, 2218, 2666, 2693, 3046
ScrFI	CCNGG	1 cut(s)	2549
SduI	GDGCHC	5 cut(s)	620, 719, 1017, 1299, 3154
SfaNI	GCATC	5 cut(s)	472, 1691, 2249, 2833, 3041
SfcI	CTRYAG	5 cut(s)	172, 252, 1482, 2040, 2459
Sfr274I	CTCGAG	1 cut(s)	2960
Sfr303I	CCGCGG	1 cut(s)	71
SfuI	TTCGAA	1 cut(s)	113
SgrBI	CCGCGG	1 cut(s)	71
SinI	GGWCC	5 cut(s)	314, 1753, 1975, 2404, 2873
SlaI	CTCGAG	1 cut(s)	2960
SmlI	CTYRAG	8 cut(s)	377, 1256, 1523, 1553, 2652, 2900, 2960, 3160
SmoI	CTYRAG	8 cut(s)	377, 1256, 1523, 1553, 2652, 2900, 2960, 3160
SphI	GCATGC	1 cut(s)	2240
SseBI	AGGCCT	1 cut(s)	178
SsiI	CCGC	9 cut(s)	68, 70, 107, 678, 1388, 1567, 1970, 2883, 2999
SspI	AATATT	1 cut(s)	2923
SspMI	CTAG	9 cut(s)	1007, 1670, 1916, 2228, 2351, 2388, 2442, 2672, 3024
StuI	AGGCCT	1 cut(s)	178
StyD4I	CCNGG	1 cut(s)	2547
StyI	CCWWGG	1 cut(s)	1149
TaaI	ACNGT	7 cut(s)	1166, 1333, 1807, 2190, 2209, 2278, 2295
TaiI	ACGT	1 cut(s)	434
TaqI	TCGA	8 cut(s)	74, 113, 119, 300, 1660, 1906, 2928, 2961
TaqII	GACCGA	1 cut(s)	2861
TatI	WGTACW	2 cut(s)	373, 845
TauI	GCSGC	2 cut(s)	70, 1570
TfiI	GAWTC	8 cut(s)	110, 886, 1415, 1421, 1741, 2486, 2537, 3167
Tru1I	TTAA	9 cut(s)	837, 1197, 1587, 2091, 2249, 2418, 2901, 3161, 3192
Tru9I	TTAA	9 cut(s)	837, 1197, 1587, 2091, 2249, 2418, 2901, 3161, 3192
TscAI	CASTG	7 cut(s)	1812, 1824, 1962, 2049, 2181, 2941, 3190
TseFI	GTSAC	3 cut(s)	559, 1767, 1819
TseI	GCWGC	9 cut(s)	10, 171, 251, 1315, 1679, 1834, 2327, 2368, 2768
Tsp45I	GTSAC	3 cut(s)	559, 1767, 1819
TspGWI	ACGGA	1 cut(s)	2735
TspRI	CASTG	7 cut(s)	1812, 1824, 1962, 2049, 2181, 2941, 3190
Van91I	CCANNNNNTGG	2 cut(s)	1129, 2260
Vha464I	CTTAAG	2 cut(s)	2900, 3160
VneI	GTGCAC	2 cut(s)	715, 3150
VpaK11BI	GGWCC	5 cut(s)	314, 1753, 1975, 2404, 2873
XapI	RAATTY	7 cut(s)	115, 513, 729, 1598, 1760, 1987, 2951
XbaI	TCTAGA	2 cut(s)	2227, 2671
XceI	RCATGY	5 cut(s)	1095, 1288, 2144, 2236, 2240
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1126, 2846
XhoI	CTCGAG	1 cut(s)	2960
XmnI	GAANNNNTTC	3 cut(s)	1902, 2068, 3045
XspI	CTAG	9 cut(s)	1007, 1670, 1916, 2228, 2351, 2388, 2442, 2672, 3024
ZrmI	AGTACT	1 cut(s)	375
Zsp2I	ATGCAT	3 cut(s)	1097, 2238, 2242

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.