Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0009274

Physical Location & Seq

Genomic Coordinates Forward (+)

6876929 .. 6882625

Gene Structure 5697 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g08490.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2991 bp

ATGGATTCCTCACAGTCCCAACAGAGAAGAGGAGGATTGGTGTCACTATCACCCTCGCAGACGCCAAGGTCGAGCGACAAGTCGGTGCGAGATCTGCGATCCGGGTATTCGAATTCGACAAAGAGGCATGAGAAGGAAAAGGGTGTCAATGTGCAGGTTCTTGTGCGTTGCAGGCCATTGAGTGAAGATGAAATGAGGGTGCATACGCCGGTCGTGATTTCTTGCAATGAGAGTAGAAGAGAAGTTGCTGCAATTCAGAATATAGCTAACAAGCAGATTGATAGAACTTTTGCGTTTGACAAGGTCTTTGGTCCGGCATCCCAACAGAAGGAACTGTATGATCAAGCTGTGGCACCTATCGTAAATGAAGTTCTTGAGGGATATAACTGCACTATCTTTGCCTATGGTCAGACAGGGACGGGAAAAACATACACAATGGAAGGAGGAGCAAGAAAGAAGAATGGGGAGTTTCCAAGTGATGCGGGTGTTATCCCAAGAGCTGTTAAACAAATTTTTGACATATTAGAAGCTCAGGTTGCTGAGTATAGCATGAAAGTCACATTTTTAGAGCTGTACAATGAGGAGATAAGTGATCTTTTGGCCCCTGATGAGAACATGAAGTTTGTAGATGACAAATCAAAGAAACCCATAGCTCTCATGGAAGATGGAAAGGGTGGTGTTTTTGTAAGAGGCTTGGAAGAAGAGATAGTGTGCACAGCAAATGAAATTTATAAAATCTTGGAGAAGGGATCGGCAAAAAGGCGTACAGCTGAGACACTTCTCAACAAACAAAGCAGTCGTTCACACTCAATATTTTCCATCACAATTCACATTAAGGAATGCACTCCAGAGGGCGAAGAAATGATTAAGTGTGGGAAGCTGAATCTTGTAGACCTCGCTGGTTCTGAGAACATTTCACGCTCTGGTGCAAGAGAGGGCAGAGCAAGGGAAGCTGGGGAGATAAATAAAAGCTTACTTACTCTTGGTCGTGTCATTAATACTCTCGTTGAGCACTCTGGTCATGTCAATCAAAAAATGATGAAATCTGCTTTGATCAAGGATTTGTATTCTGAGATTGATCGGCTCAAGCAAGGTATATGCTGCCAGAGAGAAGAATGGAATCTATATACCACGATCGATCGTTATCTTAGTGAAGAAGCAGAGAAGAAGGCAATGGCTGAAAAGATAGAACGGATGGAACATGATTCTGAATCCAAAGACAAGCAATTGCTGGAGCTTCAGGAACTTTACAGTTCTCAGCAACTTTTGGCTGTAGAATTGAGCGATAAACTTGAAAAAACTGAGAAAAAGCTTGAGGAAACTGGACATGCACTGTTTGATCTCGAGGACAAACATCGACAAGCAAATGCGACCATCAAAGAGAAGGAATTTCTGATAGTAAATCTTCTCAAATCGGAAAGATCACTTGTCGAGCGTGCATTTGAGCTGCGAGCAGAGCTAGAGAATGCTGCATCAGATGTGTCCAGTTTATTTGCTAAAATTGAGCGTAAGGACAAGATTGAAGATGGAAACCGGTTACTAGTCCAGAAATTCCAGTCCCAATTAACTCAGCAGCTTGAAGTCCTGCATAAAACTGTGGCAGTTGCAGTGACACAACAAGAACAGCAATTGAAGGATATGGAAGAGGACATGCAGTCCTTTGTATCAACGAAGGCAGAGGCTACTGAAGAACTGCGAGGAAGATTAGGAAAGCTTAAAAACATATATGGTTCTGGTATTAAAACTCTGGATGGTATAGCTGGGGATCTTGAAGGAAATTCGCAATCAACATTTTCTCATCTAAACTCTGAAGTTTCTGACCATTCTTCTGCTCTGGAAGATCTCTTCAAAGGAATCGCTTCCGAAGCTGATGCGTTACTCAATGATCTTCAAGGCAATCTTCACAACCAAGAAGAGAAGCTAAGTGCATTTGCACAACAACAGCGTGAGGCTCATGCAAGAGCAGTTGAAACTGCACGGTCAGTTTCTAAAGTTACTGTGGACTTCTTCAAAACTCTAGACTTTCATGCATCCAATCTGACCCAAATTGTGGAAGAAGCACAAACTGCCAACGACAAGAAATTGTCTGAACTTGAAGAGAAGTTTGAGGAGTGTGCTGCTAATGAAGAAAGACAGTTACTAGAGAAAGTGGCAGAGCTGCTGGCCAGTTCAAATGCCAGGAAGAAAAGACTGGTCCAAACTGCAGTAAAGGATCTTCGAGAGAGTGCAACAAGCAGAACCACCAAATTACAGCAAGAAATGTCGACCATGCAAGGTTCAACTTCTTCTATCAAAGCAAAGTGGACACTTCACATGGAAACAACAGAATCCCATTACCATGAAGATACTTCGGCTGTGGAATGTGGAAAGAAAGGCATGGAGGAGGTTCTACAGAATTGTTTGAAGCAGGCATCAATGGGTGCAGAACAATGGAAGAAAGCTCAGGGGTCCTTGCTCAATCTAGAAAAGAGAAATGTTGCTTCTGTGGATTCCATTGTCAGGAGGGGAACGGAAGCGAATCAAGCCTTACGTGATAAGTTTTCCTTGGCTGTGTCGGCTGCACTAGAAGATGTAGATGTTGCAGACAAGAATCTCCTTTCTTCCATAGATCATTCATTACAACTTGACCGTGAGGCGCGTGGAAATCTGAACTCAATGATTGTTCCATGTTGCGGGGATCTGAGGGAACTAAAGGGAGGTCACTACCATAATGTTGTTGAAATCACCGAAAATGCAGGAAAATTTCTTCTCGATGAATATGTGGTGGAGGAACCATCATGTTCCATGCCAAGAAAGAGGTCATTCAATCTTCCAAGCGTTGCATCCATTGAAGAGCTCAGGACTCCTGCTTTTGAGGAATTGTTGAGGTTATTCTGGGATGGAAGATCGGCGAAACCGCAAGCAAATGGAGACCTAAAACACATCGTAGGGGCGTACGAGGCTGCTCAATCCATTAGAGACTCCAGAGTTCCCCTCACTGCTATTAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000281 GO:0000902 GO:0000910 GO:0000911 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005819 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005886 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0008150 GO:0008574 GO:0009653 GO:0009826 GO:0009987 GO:0015630 GO:0016020 GO:0016043 GO:0016049 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0030865 GO:0031122 GO:0032502 GO:0032506 GO:0032989 GO:0032991 GO:0040007 GO:0042623 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043622 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0048589 GO:0048856 GO:0048869 GO:0051301 GO:0060560 GO:0061640 GO:0071840 GO:0071944 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:1902410 GO:1902850 GO:1903047 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

997

Amino Acids

111.48

Weight (kDa)

5.57

Isoelectric Point (pI)

49.65

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009274)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28620 AT2G28620 AT2G28620 AT3G45850 AT3G45850
fragaria_vesca	FvH4_3g34440 FvH4_3g34440
malus_domestica	MD03G1105700.v1.1 MD11G1118200.v1.1
prunus_persica	Prupe.6G088500_v2.0.a1
pyrus_communis	pycom03g08490 pycom11g09910
rosa_chinensis	RchiOBHm_Chr5g0062081
rosa_laevigata	RLG00000035530
rosa_multiflora	Rmu_sc0002296.1_g000013
rosa_roxburghii	Rroxscaffold_1G00018630
rosa_rugosa	Rorug05G0345900 Rorug05G0345900
rosa_samantha	Rh5AG407500 Rh5BG420800 Rh5DG435900
rosa_wichuraiana	Rw5G038370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	732
AasI	GACNNNNNNGTC	1 cut(s)	67
Acc36I	ACCTGC	1 cut(s)	145
AccB1I	GGYRCC	1 cut(s)	352
AccB7I	CCANNNNNTGG	1 cut(s)	2050
AccI	GTMKAC	2 cut(s)	891, 2264
AccII	CGCG	1 cut(s)	2638
AciI	CCGC	3 cut(s)	482, 2673, 2897
AclWI	GGATC	5 cut(s)	93, 757, 1773, 2220, 2685
AcoI	YGGCCR	1 cut(s)	2163
AcsI	RAATTY	7 cut(s)	112, 510, 726, 1388, 1550, 1777, 2741
AcuI	CTGAAG	3 cut(s)	1223, 1707, 1830
AcyI	GRCGYC	1 cut(s)	62
AfaI	GTAC	3 cut(s)	575, 766, 2936
AfiI	CCNNNNNNNGG	4 cut(s)	328, 2050, 2499, 2672
AgeI	ACCGGT	1 cut(s)	1533
AhdI	GACNNNNNGTC	1 cut(s)	1654
AhlI	ACTAGT	1 cut(s)	1540
AjnI	CCWGG	1 cut(s)	2177
Alw21I	GWGCWC	3 cut(s)	716, 1014, 2838
Alw26I	GTCTC	3 cut(s)	767, 2904, 2952
Alw44I	GTGCAC	1 cut(s)	712
AlwI	GGATC	5 cut(s)	93, 757, 1773, 2220, 2685
Ama87I	CYCGRG	1 cut(s)	1343
AoxI	GGCC	3 cut(s)	173, 600, 2163
ApaLI	GTGCAC	1 cut(s)	712
ApeKI	GCWGC	9 cut(s)	248, 1101, 1447, 1469, 1573, 2117, 2158, 2558, 2942
ApoI	RAATTY	7 cut(s)	112, 510, 726, 1388, 1550, 1777, 2741
ArsI	GACNNNNNNTTYG	2 cut(s)	290, 322
AseI	ATTAAT	1 cut(s)	996
AsiGI	ACCGGT	1 cut(s)	1533
Asp700I	GAANNNNTTC	1 cut(s)	1858
AspLEI	GCGC	1 cut(s)	2638
AspS9I	GGNCC	4 cut(s)	311, 601, 2194, 2448
AsuC2I	CCSGG	1 cut(s)	103
AsuHPI	GGTGA	2 cut(s)	42, 2716
AsuII	TTCGAA	1 cut(s)	110
AvaI	CYCGRG	1 cut(s)	1343
AvaII	GGWCC	3 cut(s)	311, 2194, 2448
BaeGI	GKGCMC	1 cut(s)	716
BalI	TGGCCA	1 cut(s)	2165
BanI	GGYRCC	1 cut(s)	352
BanII	GRGCYC	1 cut(s)	2838
BarI	GAAGNNNNNNTAC	2 cut(s)	2199, 2231
Bbv12I	GWGCWC	3 cut(s)	716, 1014, 2838
BbvI	GCAGC	9 cut(s)	235, 1088, 1434, 1456, 1585, 2104, 2145, 2545, 2929
BccI	CCATC	8 cut(s)	659, 827, 1189, 1382, 1520, 1745, 2782, 2873
BcgI	CGANNNNNNTGC	2 cut(s)	1853, 1887
BciT130I	CCWGG	1 cut(s)	2179
BclI	TGATCA	2 cut(s)	340, 1053
BcnI	CCSGG	1 cut(s)	103
BcoDI	GTCTC	3 cut(s)	767, 2904, 2952
BcuI	ACTAGT	1 cut(s)	1540
BfaI	CTAG	6 cut(s)	1460, 1541, 2018, 2141, 2462, 2564
BfmI	CTRYAG	3 cut(s)	1272, 2202, 2390
BfuAI	ACCTGC	1 cut(s)	145
BglII	AGATCT	2 cut(s)	91, 1840
BisI	GCNGC	9 cut(s)	249, 1102, 1448, 1470, 1574, 2118, 2159, 2559, 2943
BlsI	GCNGC	9 cut(s)	250, 1103, 1449, 1471, 1575, 2119, 2160, 2560, 2944
Bme1390I	CCNGG	2 cut(s)	103, 2179
Bme18I	GGWCC	3 cut(s)	311, 2194, 2448
BmeRI	GACNNNNNGTC	1 cut(s)	1654
BmeT110I	CYCGRG	1 cut(s)	1343
BmgT120I	GGNCC	4 cut(s)	311, 601, 2194, 2448
BmiI	GGNNCC	4 cut(s)	354, 603, 2449, 2772
BmrFI	CCNGG	2 cut(s)	103, 2179
BmsI	GCATC	7 cut(s)	326, 469, 1481, 1861, 2039, 2420, 2831
BplI	GAGNNNNNCTC	2 cut(s)	2958, 2990
BpmI	CTGGAG	3 cut(s)	831, 1253, 2947
Bpu10I	CCTNAGC	3 cut(s)	531, 2442, 2837
Bpu14I	TTCGAA	1 cut(s)	110
BpuEI	CTTGAG	3 cut(s)	395, 1070, 1334
BpuMI	CCSGG	1 cut(s)	103
Bsa29I	ATCGAT	1 cut(s)	1137
BsaAI	YACGTR	1 cut(s)	2531
BsaBI	GATNNNNATC	1 cut(s)	1143
BsaHI	GRCGYC	1 cut(s)	62
BsaI	GGTCTC	1 cut(s)	2904
BsaJI	CCNNGG	2 cut(s)	65, 2544
BsaWI	WCCGGW	1 cut(s)	1533
BsaXI	ACNNNNNCTCC	2 cut(s)	24, 54
Bsc4I	CCNNNNNNNGG	4 cut(s)	328, 2050, 2499, 2672
Bse118I	RCCGGY	2 cut(s)	208, 1533
Bse1I	ACTGG	5 cut(s)	1327, 1485, 1555, 2166, 2196
Bse3DI	GCAATG	2 cut(s)	232, 1179
Bse8I	GATNNNNATC	1 cut(s)	1143
BseBI	CCWGG	1 cut(s)	2179
BseCI	ATCGAT	1 cut(s)	1137
BseDI	CCNNGG	2 cut(s)	65, 2544
BseGI	GGATG	6 cut(s)	317, 1200, 1756, 2030, 2822, 2884
BseJI	GATNNNNATC	1 cut(s)	1143
BseLI	CCNNNNNNNGG	4 cut(s)	328, 2050, 2499, 2672
BseMI	GCAATG	2 cut(s)	232, 1179
BseNI	ACTGG	5 cut(s)	1327, 1485, 1555, 2166, 2196
BseRI	GAGGAG	5 cut(s)	45, 459, 596, 2123, 2396
BseSI	GKGCMC	1 cut(s)	716
BseXI	GCAGC	9 cut(s)	235, 1088, 1434, 1456, 1585, 2104, 2145, 2545, 2929
BseYI	CCCAGC	2 cut(s)	953, 1760
BsgI	GTGCAG	5 cut(s)	173, 373, 1959, 2442, 2544
Bsh1236I	CGCG	1 cut(s)	2638
Bsh1285I	CGRYCG	3 cut(s)	213, 1137, 1141
BshFI	GGCC	3 cut(s)	175, 602, 2165
BshNI	GGYRCC	1 cut(s)	352
BshTI	ACCGGT	1 cut(s)	1533
BshVI	ATCGAT	1 cut(s)	1137
BsiEI	CGRYCG	3 cut(s)	213, 1137, 1141
BsiHKAI	GWGCWC	3 cut(s)	716, 1014, 2838
BsiHKCI	CYCGRG	1 cut(s)	1343
BsiSI	CCGG	4 cut(s)	102, 209, 314, 1534
BsiWI	CGTACG	1 cut(s)	2934
BslFI	GGGAC	2 cut(s)	430, 1543
BslI	CCNNNNNNNGG	4 cut(s)	328, 2050, 2499, 2672
BsmAI	GTCTC	3 cut(s)	767, 2904, 2952
BsmFI	GGGAC	2 cut(s)	430, 1543
BsmI	GAATGC	2 cut(s)	845, 1471
BsnI	GGCC	3 cut(s)	175, 602, 2165
Bso31I	GGTCTC	1 cut(s)	2904
BsoBI	CYCGRG	1 cut(s)	1343
Bsp119I	TTCGAA	1 cut(s)	110
Bsp1286I	GDGCHC	3 cut(s)	716, 1014, 2838
Bsp1407I	TGTACA	1 cut(s)	573
BspACI	CCGC	3 cut(s)	482, 2673, 2897
BspANI	GGCC	3 cut(s)	175, 602, 2165
BspDI	ATCGAT	1 cut(s)	1137
BspFNI	CGCG	1 cut(s)	2638
BspLI	GGNNCC	4 cut(s)	354, 603, 2449, 2772
BspMAI	CTGCAG	1 cut(s)	2206
BspMI	ACCTGC	1 cut(s)	145
BspPI	GGATC	5 cut(s)	93, 757, 1773, 2220, 2685
BspQI	GCTCTTC	1 cut(s)	2826
BspT104I	TTCGAA	1 cut(s)	110
BspT107I	GGYRCC	1 cut(s)	352
BspTNI	GGTCTC	1 cut(s)	2904
BsrDI	GCAATG	2 cut(s)	232, 1179
BsrFI	RCCGGY	2 cut(s)	208, 1533
BsrGI	TGTACA	1 cut(s)	573
BsrI	ACTGG	5 cut(s)	1327, 1485, 1555, 2166, 2196
BssAI	RCCGGY	2 cut(s)	208, 1533
BssECI	CCNNGG	2 cut(s)	65, 2544
BssNI	GRCGYC	1 cut(s)	62
BssT1I	CCWWGG	2 cut(s)	65, 2544
Bst2UI	CCWGG	1 cut(s)	2179
Bst4CI	ACNGT	9 cut(s)	15, 336, 1253, 1335, 1597, 1980, 1999, 2136, 2630
Bst6I	CTCTTC	8 cut(s)	22, 232, 696, 1638, 1850, 1908, 2091, 2826
BstACI	GRCGYC	1 cut(s)	62
BstAPI	GCANNNNNTGC	1 cut(s)	2066
BstAUI	TGTACA	1 cut(s)	573
BstBAI	YACGTR	1 cut(s)	2531
BstBI	TTCGAA	1 cut(s)	110
BstC8I	GCNNGC	6 cut(s)	173, 1437, 1452, 2163, 2409, 2901
BstF5I	GGATG	6 cut(s)	317, 1200, 1756, 2030, 2822, 2884
BstFNI	CGCG	1 cut(s)	2638
BstHHI	GCGC	1 cut(s)	2638
BstMAI	GTCTC	3 cut(s)	767, 2904, 2952
BstMCI	CGRYCG	3 cut(s)	213, 1137, 1141
BstNI	CCWGG	1 cut(s)	2179
BstNSI	RCATGY	2 cut(s)	1331, 1654
BstSCI	CCNGG	2 cut(s)	101, 2177
BstSFI	CTRYAG	3 cut(s)	1272, 2202, 2390
BstSLI	GKGCMC	1 cut(s)	716
BstUI	CGCG	1 cut(s)	2638
BstV1I	GCAGC	9 cut(s)	235, 1088, 1434, 1456, 1585, 2104, 2145, 2545, 2929
BstX2I	RGATCY	5 cut(s)	91, 1765, 1840, 2212, 2677
BstYI	RGATCY	5 cut(s)	91, 1765, 1840, 2212, 2677
Bsu15I	ATCGAT	1 cut(s)	1137
BsuRI	GGCC	3 cut(s)	175, 602, 2165
BsuTUI	ATCGAT	1 cut(s)	1137
BtsCI	GGATG	6 cut(s)	317, 1200, 1756, 2030, 2822, 2884
BtsI	GCAGTG	2 cut(s)	1614, 2976
BtsIMutI	CAGTG	3 cut(s)	1331, 1614, 2976
BveI	ACCTGC	1 cut(s)	145
Cac8I	GCNNGC	6 cut(s)	173, 1437, 1452, 2163, 2409, 2901
CfoI	GCGC	1 cut(s)	2638
Cfr10I	RCCGGY	2 cut(s)	208, 1533
Cfr13I	GGNCC	4 cut(s)	311, 601, 2194, 2448
ClaI	ATCGAT	1 cut(s)	1137
CseI	GACGC	1 cut(s)	70
Csp6I	GTAC	3 cut(s)	574, 765, 2935
CspAI	ACCGGT	1 cut(s)	1533
CviQI	GTAC	3 cut(s)	574, 765, 2935
DrdI	GACNNNNNNGTC	1 cut(s)	67
DriI	GACNNNNNGTC	1 cut(s)	1654
DseDI	GACNNNNNNGTC	1 cut(s)	67
EaeI	YGGCCR	1 cut(s)	2163
Eam1104I	CTCTTC	8 cut(s)	22, 232, 696, 1638, 1850, 1908, 2091, 2826
Eam1105I	GACNNNNNGTC	1 cut(s)	1654
EarI	CTCTTC	8 cut(s)	22, 232, 696, 1638, 1850, 1908, 2091, 2826
Ecl136II	GAGCTC	1 cut(s)	2836
Eco130I	CCWWGG	2 cut(s)	65, 2544
Eco24I	GRGCYC	1 cut(s)	2838
Eco31I	GGTCTC	1 cut(s)	2904
Eco47I	GGWCC	3 cut(s)	311, 2194, 2448
Eco53kI	GAGCTC	1 cut(s)	2836
Eco57I	CTGAAG	3 cut(s)	1223, 1707, 1830
Eco88I	CYCGRG	1 cut(s)	1343
EcoICRI	GAGCTC	1 cut(s)	2836
EcoO109I	RGGNCCY	1 cut(s)	2448
EcoRI	GAATTC	1 cut(s)	112
EcoRII	CCWGG	1 cut(s)	2177
EcoT14I	CCWWGG	2 cut(s)	65, 2544
EcoT22I	ATGCAT	1 cut(s)	2032
EcoT38I	GRGCYC	1 cut(s)	2838
ErhI	CCWWGG	2 cut(s)	65, 2544
FalI	AAGNNNNNCTT	4 cut(s)	1884, 1916, 2528, 2560
FaqI	GGGAC	2 cut(s)	430, 1543
FauI	CCCGC	2 cut(s)	475, 2666
FbaI	TGATCA	2 cut(s)	340, 1053
FblI	GTMKAC	2 cut(s)	891, 2264
Fnu4HI	GCNGC	9 cut(s)	249, 1102, 1448, 1470, 1574, 2118, 2159, 2559, 2943
FokI	GGATG	6 cut(s)	304, 1207, 1763, 2017, 2809, 2891
FriOI	GRGCYC	1 cut(s)	2838
Fsp4HI	GCNGC	9 cut(s)	249, 1102, 1448, 1470, 1574, 2118, 2159, 2559, 2943
FspBI	CTAG	6 cut(s)	1460, 1541, 2018, 2141, 2462, 2564
GlaI	GCGC	1 cut(s)	2637
GluI	GCNGC	9 cut(s)	249, 1102, 1448, 1470, 1574, 2118, 2159, 2559, 2943
GsaI	CCCAGC	2 cut(s)	957, 1764
GsuI	CTGGAG	3 cut(s)	831, 1253, 2947
HaeIII	GGCC	3 cut(s)	175, 602, 2165
HapII	CCGG	4 cut(s)	102, 209, 314, 1534
HgaI	GACGC	1 cut(s)	70
HhaI	GCGC	1 cut(s)	2638
Hin1I	GRCGYC	1 cut(s)	62
Hin6I	GCGC	1 cut(s)	2636
HinP1I	GCGC	1 cut(s)	2636
HincII	GTYRAC	1 cut(s)	2265
HindII	GTYRAC	1 cut(s)	2265
HindIII	AAGCTT	3 cut(s)	970, 1310, 1712
HpaII	CCGG	4 cut(s)	102, 209, 314, 1534
HphI	GGTGA	2 cut(s)	42, 2716
Hpy166II	GTNNAC	6 cut(s)	714, 803, 892, 2002, 2265, 2304
Hpy8I	GTNNAC	6 cut(s)	714, 803, 892, 2002, 2265, 2304
HpyAV	CCTTC	9 cut(s)	127, 322, 434, 739, 1162, 1378, 1627, 1666, 1766
HpyCH4III	ACNGT	9 cut(s)	15, 336, 1253, 1335, 1597, 1980, 1999, 2136, 2630
HpyCH4IV	ACGT	1 cut(s)	2530
HpySE526I	ACGT	1 cut(s)	2530
Hsp92I	GRCGYC	1 cut(s)	62
HspAI	GCGC	1 cut(s)	2636
Ksp22I	TGATCA	2 cut(s)	340, 1053
LguI	GCTCTTC	1 cut(s)	2826
LmnI	GCTCC	2 cut(s)	446, 1234
Lsp1109I	GCAGC	9 cut(s)	235, 1088, 1434, 1456, 1585, 2104, 2145, 2545, 2929
LweI	GCATC	7 cut(s)	326, 469, 1481, 1861, 2039, 2420, 2831
MaeI	CTAG	6 cut(s)	1460, 1541, 2018, 2141, 2462, 2564
MaeII	ACGT	1 cut(s)	2530
MaeIII	GTNAC	8 cut(s)	42, 556, 1536, 1609, 1875, 1993, 2136, 2699
MfeI	CAATTG	2 cut(s)	1226, 1628
MflI	RGATCY	5 cut(s)	91, 1765, 1840, 2212, 2677
MhlI	GDGCHC	3 cut(s)	716, 1014, 2838
MlsI	TGGCCA	1 cut(s)	2165
MluNI	TGGCCA	1 cut(s)	2165
MlyI	GAGTC	2 cut(s)	2836, 2954
Mox20I	TGGCCA	1 cut(s)	2165
Mph1103I	ATGCAT	1 cut(s)	2032
MroXI	GAANNNNTTC	1 cut(s)	1858
MscI	TGGCCA	1 cut(s)	2165
MseI	TTAA	8 cut(s)	504, 834, 867, 996, 1565, 1716, 1740, 2985
MslI	CAYNNNNRTG	1 cut(s)	2337
Msp20I	TGGCCA	1 cut(s)	2165
MspA1I	CMGCKG	1 cut(s)	770
MspI	CCGG	4 cut(s)	102, 209, 314, 1534
MspR9I	CCNGG	2 cut(s)	103, 2179
MunI	CAATTG	2 cut(s)	1226, 1628
Mva1269I	GAATGC	2 cut(s)	845, 1471
MvaI	CCWGG	1 cut(s)	2179
MvnI	CGCG	1 cut(s)	2638
NciI	CCSGG	1 cut(s)	103
NlaIV	GGNNCC	4 cut(s)	354, 603, 2449, 2772
NmuCI	GTSAC	4 cut(s)	42, 556, 1609, 2699
NsiI	ATGCAT	1 cut(s)	2032
NspI	RCATGY	2 cut(s)	1331, 1654
NspV	TTCGAA	1 cut(s)	110
PaeR7I	CTCGAG	1 cut(s)	1343
PciSI	GCTCTTC	1 cut(s)	2826
PcsI	WCGNNNNNNNCGW	1 cut(s)	68
PctI	GAATGC	2 cut(s)	845, 1471
PdmI	GAANNNNTTC	1 cut(s)	1858
Pfl23II	CGTACG	1 cut(s)	2934
PflFI	GACNNNGTC	1 cut(s)	302
PflMI	CCANNNNNTGG	1 cut(s)	2050
PinAI	ACCGGT	1 cut(s)	1533
PkrI	GCNGC	9 cut(s)	250, 1103, 1449, 1471, 1575, 2119, 2160, 2560, 2944
Ple19I	CGATCG	2 cut(s)	1137, 1141
PleI	GAGTC	2 cut(s)	2836, 2954
PpsI	GAGTC	2 cut(s)	2836, 2954
Ppu21I	YACGTR	1 cut(s)	2531
PpuMI	RGGWCCY	1 cut(s)	2448
PshBI	ATTAAT	1 cut(s)	996
PsiI	TTATAA	1 cut(s)	732
Psp124BI	GAGCTC	1 cut(s)	2838
Psp5II	RGGWCCY	1 cut(s)	2448
Psp6I	CCWGG	1 cut(s)	2177
PspFI	CCCAGC	2 cut(s)	953, 1760
PspGI	CCWGG	1 cut(s)	2177
PspLI	CGTACG	1 cut(s)	2934
PspN4I	GGNNCC	4 cut(s)	354, 603, 2449, 2772
PspPI	GGNCC	4 cut(s)	311, 601, 2194, 2448
PspPPI	RGGWCCY	1 cut(s)	2448
PsrI	GAACNNNNNNTAC	2 cut(s)	354, 386
PstI	CTGCAG	1 cut(s)	2206
PsuI	RGATCY	5 cut(s)	91, 1765, 1840, 2212, 2677
PsyI	GACNNNGTC	1 cut(s)	302
PvuI	CGATCG	2 cut(s)	1137, 1141
PvuII	CAGCTG	1 cut(s)	770
RsaI	GTAC	3 cut(s)	575, 766, 2936
RsaNI	GTAC	3 cut(s)	574, 765, 2935
RseI	CAYNNNNRTG	1 cut(s)	2337
SacI	GAGCTC	1 cut(s)	2838
SalI	GTCGAC	1 cut(s)	2263
SapI	GCTCTTC	1 cut(s)	2826
SaqAI	TTAA	8 cut(s)	504, 834, 867, 996, 1565, 1716, 1740, 2985
SatI	GCNGC	9 cut(s)	249, 1102, 1448, 1470, 1574, 2118, 2159, 2559, 2943
Sau96I	GGNCC	4 cut(s)	311, 601, 2194, 2448
SchI	GAGTC	2 cut(s)	2836, 2954
ScrFI	CCNGG	2 cut(s)	103, 2179
SduI	GDGCHC	3 cut(s)	716, 1014, 2838
SfaNI	GCATC	7 cut(s)	326, 469, 1481, 1861, 2039, 2420, 2831
SfcI	CTRYAG	3 cut(s)	1272, 2202, 2390
Sfr274I	CTCGAG	1 cut(s)	1343
SfuI	TTCGAA	1 cut(s)	110
SinI	GGWCC	3 cut(s)	311, 2194, 2448
SlaI	CTCGAG	1 cut(s)	1343
SmiMI	CAYNNNNRTG	1 cut(s)	2337
SmlI	CTYRAG	4 cut(s)	374, 1085, 1313, 1343
SmoI	CTYRAG	4 cut(s)	374, 1085, 1313, 1343
SpeI	ACTAGT	1 cut(s)	1540
SsiI	CCGC	3 cut(s)	482, 2673, 2897
SspI	AATATT	1 cut(s)	813
SspMI	CTAG	6 cut(s)	1460, 1541, 2018, 2141, 2462, 2564
SstI	GAGCTC	1 cut(s)	2838
StyD4I	CCNGG	2 cut(s)	101, 2177
StyI	CCWWGG	2 cut(s)	65, 2544
TaaI	ACNGT	9 cut(s)	15, 336, 1253, 1335, 1597, 1980, 1999, 2136, 2630
TaiI	ACGT	1 cut(s)	2533
TatI	WGTACW	1 cut(s)	573
Tru1I	TTAA	8 cut(s)	504, 834, 867, 996, 1565, 1716, 1740, 2985
Tru9I	TTAA	8 cut(s)	504, 834, 867, 996, 1565, 1716, 1740, 2985
TscAI	CASTG	3 cut(s)	1338, 1614, 2983
TseFI	GTSAC	4 cut(s)	42, 556, 1609, 2699
TseI	GCWGC	9 cut(s)	248, 1101, 1447, 1469, 1573, 2117, 2158, 2558, 2942
Tsp45I	GTSAC	4 cut(s)	42, 556, 1609, 2699
TspGWI	ACGGA	2 cut(s)	1207, 2525
TspRI	CASTG	3 cut(s)	1338, 1614, 2983
Tth111I	GACNNNGTC	1 cut(s)	302
Van91I	CCANNNNNTGG	1 cut(s)	2050
VneI	GTGCAC	1 cut(s)	712
VpaK11BI	GGWCC	3 cut(s)	311, 2194, 2448
VspI	ATTAAT	1 cut(s)	996
XapI	RAATTY	7 cut(s)	112, 510, 726, 1388, 1550, 1777, 2741
XbaI	TCTAGA	2 cut(s)	2017, 2461
XceI	RCATGY	2 cut(s)	1331, 1654
XcmI	CCANNNNNNNNNTGG	1 cut(s)	655
XhoI	CTCGAG	1 cut(s)	1343
XmiI	GTMKAC	2 cut(s)	891, 2264
XmnI	GAANNNNTTC	1 cut(s)	1858
XspI	CTAG	6 cut(s)	1460, 1541, 2018, 2141, 2462, 2564
Zsp2I	ATGCAT	1 cut(s)	2032

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.