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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g25790 FvH4_3g25790 |
| malus_domestica | MD03G1150600.v1.1 MD11G1170000.v1.1 |
| prunus_persica | Prupe.6G137500_v2.0.a1 |
| pyrus_communis | pycom03g10470 pycom11g14240 |
| rosa_chinensis | RchiOBHm_Chr5g0047011 |
| rosa_laevigata | RLG00000034458 |
| rosa_multiflora | Rmu_sc0005544.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00034420 |
| rosa_rugosa | Rorug05G0233200 |
| rosa_samantha | Rh5AG312400 Rh5BG321500 Rh5CG347700 Rh5DG332400 |
| rosa_wichuraiana | Rw5G029200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 232 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 34 |
| AccI | GTMKAC | 1 cut(s) | 42 |
| AccII | CGCG | 4 cut(s) | 69, 191, 744, 1245 |
| AclWI | GGATC | 6 cut(s) | 517, 835, 1441, 1882, 1934, 1947 |
| AcoI | YGGCCR | 1 cut(s) | 543 |
| AcsI | RAATTY | 3 cut(s) | 1705, 1870, 1962 |
| AcuI | CTGAAG | 5 cut(s) | 1208, 1340, 1369, 1503, 1614 |
| AcyI | GRCGYC | 1 cut(s) | 526 |
| AdeI | CACNNNGTG | 1 cut(s) | 218 |
| AfaI | GTAC | 5 cut(s) | 113, 273, 778, 1788, 1906 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 34, 1949 |
| AjnI | CCWGG | 5 cut(s) | 132, 173, 825, 911, 1942 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1271, 1303 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1691, 1723 |
| Alw21I | GWGCWC | 3 cut(s) | 161, 820, 1156 |
| Alw26I | GTCTC | 2 cut(s) | 280, 1853 |
| AlwI | GGATC | 6 cut(s) | 517, 835, 1441, 1882, 1934, 1947 |
| Ama87I | CYCGRG | 3 cut(s) | 154, 971, 1403 |
| AoxI | GGCC | 5 cut(s) | 543, 703, 792, 909, 1062 |
| ApoI | RAATTY | 3 cut(s) | 1705, 1870, 1962 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1221 |
| AspLEI | GCGC | 3 cut(s) | 69, 191, 1245 |
| AspS9I | GGNCC | 2 cut(s) | 103, 793 |
| AsuHPI | GGTGA | 1 cut(s) | 204 |
| AsuII | TTCGAA | 1 cut(s) | 296 |
| AsuNHI | GCTAGC | 1 cut(s) | 1228 |
| AvaI | CYCGRG | 3 cut(s) | 154, 971, 1403 |
| AvaII | GGWCC | 1 cut(s) | 103 |
| BamHI | GGATCC | 1 cut(s) | 1939 |
| BanII | GRGCYC | 2 cut(s) | 80, 820 |
| BauI | CACGAG | 1 cut(s) | 881 |
| BbsI | GAAGAC | 5 cut(s) | 75, 87, 185, 1000, 1506 |
| Bbv12I | GWGCWC | 3 cut(s) | 161, 820, 1156 |
| BccI | CCATC | 2 cut(s) | 256, 1550 |
| BceAI | ACGGC | 2 cut(s) | 319, 530 |
| BciT130I | CCWGG | 5 cut(s) | 134, 175, 827, 913, 1944 |
| BciVI | GTATCC | 2 cut(s) | 833, 930 |
| BcoDI | GTCTC | 2 cut(s) | 280, 1853 |
| BfaI | CTAG | 3 cut(s) | 1229, 1331, 1842 |
| BfuI | GTATCC | 2 cut(s) | 833, 930 |
| BlpI | GCTNAGC | 1 cut(s) | 1897 |
| Bme1390I | CCNGG | 5 cut(s) | 134, 175, 827, 913, 1944 |
| Bme18I | GGWCC | 1 cut(s) | 103 |
| BmeT110I | CYCGRG | 3 cut(s) | 154, 971, 1403 |
| BmgT120I | GGNCC | 2 cut(s) | 103, 793 |
| BmiI | GGNNCC | 3 cut(s) | 451, 1941, 1948 |
| BmrFI | CCNGG | 5 cut(s) | 134, 175, 827, 913, 1944 |
| BmrI | ACTGGG | 1 cut(s) | 158 |
| BmtI | GCTAGC | 1 cut(s) | 1232 |
| BmuI | ACTGGG | 1 cut(s) | 158 |
| BpiI | GAAGAC | 5 cut(s) | 75, 87, 185, 1000, 1506 |
| BpmI | CTGGAG | 1 cut(s) | 1362 |
| Bpu10I | CCTNAGC | 1 cut(s) | 442 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1897 |
| Bpu14I | TTCGAA | 1 cut(s) | 296 |
| BpuEI | CTTGAG | 3 cut(s) | 104, 1097, 1728 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1530 |
| BsaHI | GRCGYC | 1 cut(s) | 526 |
| BsaI | GGTCTC | 2 cut(s) | 280, 1853 |
| BsaJI | CCNNGG | 1 cut(s) | 99 |
| BsaWI | WCCGGW | 1 cut(s) | 1949 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 34, 1949 |
| Bse118I | RCCGGY | 3 cut(s) | 289, 446, 1901 |
| Bse1I | ACTGG | 3 cut(s) | 164, 612, 1038 |
| Bse3DI | GCAATG | 2 cut(s) | 22, 56 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1530 |
| BseBI | CCWGG | 5 cut(s) | 134, 175, 827, 913, 1944 |
| BseDI | CCNNGG | 1 cut(s) | 99 |
| BseGI | GGATG | 2 cut(s) | 476, 697 |
| BseJI | GATNNNNATC | 1 cut(s) | 1530 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 34, 1949 |
| BseMI | GCAATG | 2 cut(s) | 22, 56 |
| BseMII | CTCAG | 2 cut(s) | 486, 635 |
| BseNI | ACTGG | 3 cut(s) | 164, 612, 1038 |
| BseRI | GAGGAG | 5 cut(s) | 79, 514, 1262, 1307, 1669 |
| BseX3I | CGGCCG | 1 cut(s) | 543 |
| Bsh1236I | CGCG | 4 cut(s) | 69, 191, 744, 1245 |
| Bsh1285I | CGRYCG | 1 cut(s) | 546 |
| BshFI | GGCC | 5 cut(s) | 545, 705, 794, 911, 1064 |
| BsiEI | CGRYCG | 1 cut(s) | 546 |
| BsiHKAI | GWGCWC | 3 cut(s) | 161, 820, 1156 |
| BsiHKCI | CYCGRG | 3 cut(s) | 154, 971, 1403 |
| BsiSI | CCGG | 4 cut(s) | 290, 447, 1902, 1950 |
| BslFI | GGGAC | 1 cut(s) | 152 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 34, 1949 |
| BsmAI | GTCTC | 2 cut(s) | 280, 1853 |
| BsmFI | GGGAC | 1 cut(s) | 152 |
| BsmI | GAATGC | 2 cut(s) | 523, 766 |
| BsnI | GGCC | 5 cut(s) | 545, 705, 794, 911, 1064 |
| Bso31I | GGTCTC | 2 cut(s) | 280, 1853 |
| BsoBI | CYCGRG | 3 cut(s) | 154, 971, 1403 |
| Bsp119I | TTCGAA | 1 cut(s) | 296 |
| Bsp1286I | GDGCHC | 4 cut(s) | 80, 161, 820, 1156 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1897 |
| BspANI | GGCC | 5 cut(s) | 545, 705, 794, 911, 1064 |
| BspCNI | CTCAG | 2 cut(s) | 487, 634 |
| BspFNI | CGCG | 4 cut(s) | 69, 191, 744, 1245 |
| BspLI | GGNNCC | 3 cut(s) | 451, 1941, 1948 |
| BspOI | GCTAGC | 1 cut(s) | 1232 |
| BspPI | GGATC | 6 cut(s) | 517, 835, 1441, 1882, 1934, 1947 |
| BspQI | GCTCTTC | 2 cut(s) | 753, 1158 |
| BspT104I | TTCGAA | 1 cut(s) | 296 |
| BspTNI | GGTCTC | 2 cut(s) | 280, 1853 |
| BsrDI | GCAATG | 2 cut(s) | 22, 56 |
| BsrFI | RCCGGY | 3 cut(s) | 289, 446, 1901 |
| BsrI | ACTGG | 3 cut(s) | 164, 612, 1038 |
| BssAI | RCCGGY | 3 cut(s) | 289, 446, 1901 |
| BssECI | CCNNGG | 1 cut(s) | 99 |
| BssNI | GRCGYC | 1 cut(s) | 526 |
| BssSI | CACGAG | 1 cut(s) | 881 |
| BssT1I | CCWWGG | 1 cut(s) | 99 |
| Bst2BI | CACGAG | 1 cut(s) | 881 |
| Bst2UI | CCWGG | 5 cut(s) | 134, 175, 827, 913, 1944 |
| Bst4CI | ACNGT | 2 cut(s) | 184, 271 |
| Bst6I | CTCTTC | 4 cut(s) | 753, 1082, 1158, 1191 |
| BstACI | GRCGYC | 1 cut(s) | 526 |
| BstBI | TTCGAA | 1 cut(s) | 296 |
| BstC8I | GCNNGC | 4 cut(s) | 360, 955, 1230, 1594 |
| BstDEI | CTNAG | 5 cut(s) | 442, 495, 621, 989, 1897 |
| BstF5I | GGATG | 2 cut(s) | 476, 697 |
| BstFNI | CGCG | 4 cut(s) | 69, 191, 744, 1245 |
| BstHHI | GCGC | 3 cut(s) | 69, 191, 1245 |
| BstMAI | GTCTC | 2 cut(s) | 280, 1853 |
| BstMCI | CGRYCG | 1 cut(s) | 546 |
| BstNI | CCWGG | 5 cut(s) | 134, 175, 827, 913, 1944 |
| BstNSI | RCATGY | 1 cut(s) | 944 |
| BstSCI | CCNGG | 5 cut(s) | 132, 173, 825, 911, 1942 |
| BstUI | CGCG | 4 cut(s) | 69, 191, 744, 1245 |
| BstV2I | GAAGAC | 5 cut(s) | 75, 87, 185, 1000, 1506 |
| BstX2I | RGATCY | 2 cut(s) | 509, 1939 |
| BstYI | RGATCY | 2 cut(s) | 509, 1939 |
| BstZI | CGGCCG | 1 cut(s) | 543 |
| BsuI | GTATCC | 2 cut(s) | 833, 930 |
| BsuRI | GGCC | 5 cut(s) | 545, 705, 794, 911, 1064 |
| BtsCI | GGATG | 2 cut(s) | 476, 697 |
| Cac8I | GCNNGC | 4 cut(s) | 360, 955, 1230, 1594 |
| CfoI | GCGC | 3 cut(s) | 69, 191, 1245 |
| Cfr10I | RCCGGY | 3 cut(s) | 289, 446, 1901 |
| Cfr13I | GGNCC | 2 cut(s) | 103, 793 |
| CseI | GACGC | 1 cut(s) | 534 |
| Csp6I | GTAC | 5 cut(s) | 112, 272, 777, 1787, 1905 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 5, 40, 1120, 1155 |
| CviAII | CATG | 3 cut(s) | 941, 1447, 1555 |
| CviQI | GTAC | 5 cut(s) | 112, 272, 777, 1787, 1905 |
| DdeI | CTNAG | 5 cut(s) | 442, 495, 621, 989, 1897 |
| DraI | TTTAAA | 1 cut(s) | 1416 |
| DraIII | CACNNNGTG | 1 cut(s) | 218 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 232 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 232 |
| EaeI | YGGCCR | 1 cut(s) | 543 |
| EagI | CGGCCG | 1 cut(s) | 543 |
| Eam1104I | CTCTTC | 4 cut(s) | 753, 1082, 1158, 1191 |
| EarI | CTCTTC | 4 cut(s) | 753, 1082, 1158, 1191 |
| Ecl136II | GAGCTC | 1 cut(s) | 818 |
| EclXI | CGGCCG | 1 cut(s) | 543 |
| Eco130I | CCWWGG | 1 cut(s) | 99 |
| Eco24I | GRGCYC | 2 cut(s) | 80, 820 |
| Eco31I | GGTCTC | 2 cut(s) | 280, 1853 |
| Eco32I | GATATC | 1 cut(s) | 1347 |
| Eco47I | GGWCC | 1 cut(s) | 103 |
| Eco52I | CGGCCG | 1 cut(s) | 543 |
| Eco53kI | GAGCTC | 1 cut(s) | 818 |
| Eco57I | CTGAAG | 5 cut(s) | 1208, 1340, 1369, 1503, 1614 |
| Eco88I | CYCGRG | 3 cut(s) | 154, 971, 1403 |
| EcoICRI | GAGCTC | 1 cut(s) | 818 |
| EcoRI | GAATTC | 1 cut(s) | 1870 |
| EcoRII | CCWGG | 5 cut(s) | 132, 173, 825, 911, 1942 |
| EcoRV | GATATC | 1 cut(s) | 1347 |
| EcoT14I | CCWWGG | 1 cut(s) | 99 |
| EcoT38I | GRGCYC | 2 cut(s) | 80, 820 |
| ErhI | CCWWGG | 1 cut(s) | 99 |
| FaeI | CATG | 3 cut(s) | 944, 1450, 1558 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 199, 231 |
| FaqI | GGGAC | 1 cut(s) | 152 |
| FatI | CATG | 3 cut(s) | 940, 1446, 1554 |
| FauI | CCCGC | 1 cut(s) | 62 |
| FauNDI | CATATG | 1 cut(s) | 1691 |
| FblI | GTMKAC | 1 cut(s) | 42 |
| FokI | GGATG | 2 cut(s) | 463, 704 |
| FriOI | GRGCYC | 2 cut(s) | 80, 820 |
| FspBI | CTAG | 3 cut(s) | 1229, 1331, 1842 |
| GlaI | GCGC | 3 cut(s) | 68, 190, 1244 |
| GsuI | CTGGAG | 1 cut(s) | 1362 |
| HaeIII | GGCC | 5 cut(s) | 545, 705, 794, 911, 1064 |
| HapII | CCGG | 4 cut(s) | 290, 447, 1902, 1950 |
| HgaI | GACGC | 1 cut(s) | 534 |
| HhaI | GCGC | 3 cut(s) | 69, 191, 1245 |
| Hin1I | GRCGYC | 1 cut(s) | 526 |
| Hin1II | CATG | 3 cut(s) | 944, 1450, 1558 |
| Hin6I | GCGC | 3 cut(s) | 67, 189, 1243 |
| HinP1I | GCGC | 3 cut(s) | 67, 189, 1243 |
| HincII | GTYRAC | 1 cut(s) | 43 |
| HindII | GTYRAC | 1 cut(s) | 43 |
| HinfI | GANTC | 8 cut(s) | 117, 473, 568, 595, 1178, 1254, 1505, 1616 |
| HpaII | CCGG | 4 cut(s) | 290, 447, 1902, 1950 |
| HphI | GGTGA | 1 cut(s) | 204 |
| Hpy166II | GTNNAC | 1 cut(s) | 43 |
| Hpy188III | TCNNGA | 7 cut(s) | 61, 121, 592, 755, 883, 1258, 1379 |
| Hpy8I | GTNNAC | 1 cut(s) | 43 |
| Hpy99I | CGWCG | 2 cut(s) | 44, 229 |
| HpyAV | CCTTC | 9 cut(s) | 322, 406, 447, 682, 1054, 1201, 1355, 1451, 1930 |
| HpyCH4III | ACNGT | 2 cut(s) | 184, 271 |
| HpyCH4IV | ACGT | 1 cut(s) | 1355 |
| HpyCH4V | TGCA | 5 cut(s) | 54, 663, 864, 947, 1481 |
| HpyF3I | CTNAG | 5 cut(s) | 442, 495, 621, 989, 1897 |
| HpySE526I | ACGT | 1 cut(s) | 1355 |
| Hsp92I | GRCGYC | 1 cut(s) | 526 |
| Hsp92II | CATG | 3 cut(s) | 944, 1450, 1558 |
| HspAI | GCGC | 3 cut(s) | 67, 189, 1243 |
| LguI | GCTCTTC | 2 cut(s) | 753, 1158 |
| LmnI | GCTCC | 1 cut(s) | 925 |
| MaeI | CTAG | 3 cut(s) | 1229, 1331, 1842 |
| MaeII | ACGT | 1 cut(s) | 1355 |
| MflI | RGATCY | 2 cut(s) | 509, 1939 |
| MhlI | GDGCHC | 4 cut(s) | 80, 161, 820, 1156 |
| MlyI | GAGTC | 3 cut(s) | 111, 589, 1263 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1221 |
| MseI | TTAA | 6 cut(s) | 381, 617, 675, 773, 1415, 1550 |
| MspA1I | CMGCKG | 4 cut(s) | 283, 318, 1318, 1713 |
| MspI | CCGG | 4 cut(s) | 290, 447, 1902, 1950 |
| MspR9I | CCNGG | 5 cut(s) | 134, 175, 827, 913, 1944 |
| Mva1269I | GAATGC | 2 cut(s) | 523, 766 |
| MvaI | CCWGG | 5 cut(s) | 134, 175, 827, 913, 1944 |
| MvnI | CGCG | 4 cut(s) | 69, 191, 744, 1245 |
| NdeI | CATATG | 1 cut(s) | 1691 |
| NheI | GCTAGC | 1 cut(s) | 1228 |
| NlaIII | CATG | 3 cut(s) | 944, 1450, 1558 |
| NlaIV | GGNNCC | 3 cut(s) | 451, 1941, 1948 |
| NmeAIII | GCCGAG | 1 cut(s) | 770 |
| NspI | RCATGY | 1 cut(s) | 944 |
| NspV | TTCGAA | 1 cut(s) | 296 |
| PaeR7I | CTCGAG | 3 cut(s) | 154, 971, 1403 |
| PciSI | GCTCTTC | 2 cut(s) | 753, 1158 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 347 |
| PctI | GAATGC | 2 cut(s) | 523, 766 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1221 |
| PfeI | GAWTC | 5 cut(s) | 473, 568, 1178, 1505, 1616 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 34 |
| PfoI | TCCNGGA | 1 cut(s) | 1942 |
| PleI | GAGTC | 3 cut(s) | 111, 589, 1262 |
| PpsI | GAGTC | 3 cut(s) | 111, 589, 1262 |
| Psp124BI | GAGCTC | 1 cut(s) | 820 |
| Psp6I | CCWGG | 5 cut(s) | 132, 173, 825, 911, 1942 |
| PspGI | CCWGG | 5 cut(s) | 132, 173, 825, 911, 1942 |
| PspN4I | GGNNCC | 3 cut(s) | 451, 1941, 1948 |
| PspPI | GGNCC | 2 cut(s) | 103, 793 |
| PspXI | VCTCGAGB | 3 cut(s) | 154, 971, 1403 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1357, 1389 |
| PsuI | RGATCY | 2 cut(s) | 509, 1939 |
| PvuII | CAGCTG | 1 cut(s) | 1318 |
| RsaI | GTAC | 5 cut(s) | 113, 273, 778, 1788, 1906 |
| RsaNI | GTAC | 5 cut(s) | 112, 272, 777, 1787, 1905 |
| SacI | GAGCTC | 1 cut(s) | 820 |
| SalI | GTCGAC | 1 cut(s) | 41 |
| SapI | GCTCTTC | 2 cut(s) | 753, 1158 |
| SaqAI | TTAA | 6 cut(s) | 381, 617, 675, 773, 1415, 1550 |
| Sau96I | GGNCC | 2 cut(s) | 103, 793 |
| SchI | GAGTC | 3 cut(s) | 111, 589, 1263 |
| ScrFI | CCNGG | 5 cut(s) | 134, 175, 827, 913, 1944 |
| SduI | GDGCHC | 4 cut(s) | 80, 161, 820, 1156 |
| Sfr274I | CTCGAG | 3 cut(s) | 154, 971, 1403 |
| SfuI | TTCGAA | 1 cut(s) | 296 |
| SinI | GGWCC | 1 cut(s) | 103 |
| SlaI | CTCGAG | 3 cut(s) | 154, 971, 1403 |
| SmlI | CTYRAG | 6 cut(s) | 119, 154, 971, 1076, 1403, 1743 |
| SmoI | CTYRAG | 6 cut(s) | 119, 154, 971, 1076, 1403, 1743 |
| SspMI | CTAG | 3 cut(s) | 1229, 1331, 1842 |
| SstI | GAGCTC | 1 cut(s) | 820 |
| StyD4I | CCNGG | 5 cut(s) | 132, 173, 825, 911, 1942 |
| StyI | CCWWGG | 1 cut(s) | 99 |
| TaaI | ACNGT | 2 cut(s) | 184, 271 |
| TaiI | ACGT | 1 cut(s) | 1358 |
| TatI | WGTACW | 1 cut(s) | 776 |
| TfiI | GAWTC | 5 cut(s) | 473, 568, 1178, 1505, 1616 |
| Tru1I | TTAA | 6 cut(s) | 381, 617, 675, 773, 1415, 1550 |
| Tru9I | TTAA | 6 cut(s) | 381, 617, 675, 773, 1415, 1550 |
| TspDTI | ATGAA | 9 cut(s) | 465, 821, 1277, 1341, 1374, 1463, 1526, 1827, 1949 |
| TspGWI | ACGGA | 2 cut(s) | 684, 1639 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 34 |
| VpaK11BI | GGWCC | 1 cut(s) | 103 |
| XapI | RAATTY | 3 cut(s) | 1705, 1870, 1962 |
| XceI | RCATGY | 1 cut(s) | 944 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 171 |
| XhoI | CTCGAG | 3 cut(s) | 154, 971, 1403 |
| XmiI | GTMKAC | 1 cut(s) | 42 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1221 |
| XspI | CTAG | 3 cut(s) | 1229, 1331, 1842 |