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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g25790 FvH4_3g25790 |
| malus_domestica | MD03G1150600.v1.1 MD11G1170000.v1.1 |
| prunus_persica | Prupe.6G137500_v2.0.a1 |
| pyrus_communis | pycom03g10470 pycom11g14240 |
| rosa_chinensis | RchiOBHm_Chr5g0047011 |
| rosa_laevigata | RLG00000034458 |
| rosa_multiflora | Rmu_sc0005544.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00034420 |
| rosa_rugosa | Rorug05G0233200 |
| rosa_samantha | Rh5AG312400 Rh5BG321500 Rh5CG347700 Rh5DG332400 |
| rosa_wichuraiana | Rw5G029200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 154 |
| AccII | CGCG | 3 cut(s) | 730, 732, 1155 |
| AciI | CCGC | 7 cut(s) | 16, 112, 191, 294, 380, 464, 1214 |
| AclWI | GGATC | 5 cut(s) | 389, 439, 745, 1251, 1705 |
| AcsI | RAATTY | 3 cut(s) | 386, 477, 1336 |
| AcuI | CTGAAG | 3 cut(s) | 1118, 1250, 1524 |
| AfaI | GTAC | 4 cut(s) | 101, 148, 788, 1193 |
| AjnI | CCWGG | 2 cut(s) | 735, 821 |
| AluBI | AGCT | 9 cut(s) | 289, 631, 898, 931, 962, 1138, 1177, 1240, 1470 |
| AluI | AGCT | 9 cut(s) | 289, 631, 898, 931, 962, 1138, 1177, 1240, 1470 |
| Alw21I | GWGCWC | 1 cut(s) | 633 |
| Alw26I | GTCTC | 6 cut(s) | 280, 506, 1290, 1362, 1560, 1715 |
| AlwI | GGATC | 5 cut(s) | 389, 439, 745, 1251, 1705 |
| AoxI | GGCC | 4 cut(s) | 114, 610, 1062, 1317 |
| ApaI | GGGCCC | 1 cut(s) | 1066 |
| ApeKI | GCWGC | 6 cut(s) | 42, 232, 670, 673, 818, 854 |
| ApoI | RAATTY | 3 cut(s) | 386, 477, 1336 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1098, 1131 |
| AspLEI | GCGC | 4 cut(s) | 203, 730, 732, 1155 |
| AspS9I | GGNCC | 3 cut(s) | 114, 1062, 1063 |
| AsuC2I | CCSGG | 1 cut(s) | 139 |
| AsuHPI | GGTGA | 3 cut(s) | 1280, 1292, 1433 |
| AsuII | TTCGAA | 1 cut(s) | 1514 |
| AsuNHI | GCTAGC | 1 cut(s) | 1138 |
| BaeGI | GKGCMC | 1 cut(s) | 1066 |
| BanI | GGYRCC | 1 cut(s) | 154 |
| BanII | GRGCYC | 3 cut(s) | 182, 633, 1066 |
| BauI | CACGAG | 2 cut(s) | 446, 648 |
| BbsI | GAAGAC | 4 cut(s) | 63, 75, 173, 1062 |
| Bbv12I | GWGCWC | 1 cut(s) | 633 |
| BbvI | GCAGC | 6 cut(s) | 54, 244, 682, 685, 830, 841 |
| BccI | CCATC | 3 cut(s) | 406, 1367, 1646 |
| BceAI | ACGGC | 1 cut(s) | 1025 |
| BciT130I | CCWGG | 2 cut(s) | 737, 823 |
| BclI | TGATCA | 1 cut(s) | 490 |
| BcnI | CCSGG | 1 cut(s) | 139 |
| BcoDI | GTCTC | 6 cut(s) | 280, 506, 1290, 1362, 1560, 1715 |
| BfaI | CTAG | 2 cut(s) | 1139, 1241 |
| BfmI | CTRYAG | 1 cut(s) | 858 |
| Bme1390I | CCNGG | 3 cut(s) | 139, 737, 823 |
| BmgT120I | GGNCC | 3 cut(s) | 114, 1062, 1063 |
| BmiI | GGNNCC | 2 cut(s) | 156, 1064 |
| BmrFI | CCNGG | 3 cut(s) | 139, 737, 823 |
| BmsI | GCATC | 2 cut(s) | 1489, 1666 |
| BmtI | GCTAGC | 1 cut(s) | 1142 |
| BpiI | GAAGAC | 4 cut(s) | 63, 75, 173, 1062 |
| BpmI | CTGGAG | 2 cut(s) | 456, 1272 |
| Bpu14I | TTCGAA | 1 cut(s) | 1514 |
| BpuEI | CTTGAG | 4 cut(s) | 1007, 1273, 1334, 1623 |
| BpuMI | CCSGG | 1 cut(s) | 139 |
| BsaAI | YACGTR | 1 cut(s) | 851 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1656 |
| BsaI | GGTCTC | 1 cut(s) | 1560 |
| BsaJI | CCNNGG | 3 cut(s) | 87, 240, 624 |
| Bse118I | RCCGGY | 2 cut(s) | 151, 1607 |
| Bse1I | ACTGG | 2 cut(s) | 433, 948 |
| Bse3DI | GCAATG | 2 cut(s) | 44, 613 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1656 |
| BseBI | CCWGG | 2 cut(s) | 737, 823 |
| BseDI | CCNNGG | 3 cut(s) | 87, 240, 624 |
| BseGI | GGATG | 1 cut(s) | 620 |
| BseJI | GATNNNNATC | 1 cut(s) | 1656 |
| BseMI | GCAATG | 2 cut(s) | 44, 613 |
| BseMII | CTCAG | 5 cut(s) | 291, 485, 714, 890, 1671 |
| BseNI | ACTGG | 2 cut(s) | 433, 948 |
| BsePI | GCGCGC | 1 cut(s) | 728 |
| BseRI | GAGGAG | 1 cut(s) | 1172 |
| BseSI | GKGCMC | 1 cut(s) | 1066 |
| BseXI | GCAGC | 6 cut(s) | 54, 244, 682, 685, 830, 841 |
| Bsh1236I | CGCG | 3 cut(s) | 730, 732, 1155 |
| BshFI | GGCC | 4 cut(s) | 116, 612, 1064, 1319 |
| BshNI | GGYRCC | 1 cut(s) | 154 |
| BsiHKAI | GWGCWC | 1 cut(s) | 633 |
| BsiSI | CCGG | 3 cut(s) | 138, 152, 1608 |
| BslFI | GGGAC | 1 cut(s) | 305 |
| BsmAI | GTCTC | 6 cut(s) | 280, 506, 1290, 1362, 1560, 1715 |
| BsmBI | CGTCTC | 1 cut(s) | 1362 |
| BsmFI | GGGAC | 1 cut(s) | 305 |
| BsmI | GAATGC | 2 cut(s) | 235, 676 |
| BsnI | GGCC | 4 cut(s) | 116, 612, 1064, 1319 |
| Bso31I | GGTCTC | 1 cut(s) | 1560 |
| Bsp119I | TTCGAA | 1 cut(s) | 1514 |
| Bsp120I | GGGCCC | 1 cut(s) | 1062 |
| Bsp1286I | GDGCHC | 3 cut(s) | 182, 633, 1066 |
| BspACI | CCGC | 7 cut(s) | 16, 112, 191, 294, 380, 464, 1214 |
| BspANI | GGCC | 4 cut(s) | 116, 612, 1064, 1319 |
| BspCNI | CTCAG | 5 cut(s) | 290, 484, 713, 891, 1672 |
| BspFNI | CGCG | 3 cut(s) | 730, 732, 1155 |
| BspHI | TCATGA | 1 cut(s) | 792 |
| BspLI | GGNNCC | 2 cut(s) | 156, 1064 |
| BspOI | GCTAGC | 1 cut(s) | 1142 |
| BspPI | GGATC | 5 cut(s) | 389, 439, 745, 1251, 1705 |
| BspQI | GCTCTTC | 1 cut(s) | 660 |
| BspT104I | TTCGAA | 1 cut(s) | 1514 |
| BspT107I | GGYRCC | 1 cut(s) | 154 |
| BspTNI | GGTCTC | 1 cut(s) | 1560 |
| BsrDI | GCAATG | 2 cut(s) | 44, 613 |
| BsrFI | RCCGGY | 2 cut(s) | 151, 1607 |
| BsrI | ACTGG | 2 cut(s) | 433, 948 |
| BssAI | RCCGGY | 2 cut(s) | 151, 1607 |
| BssECI | CCNNGG | 3 cut(s) | 87, 240, 624 |
| BssHII | GCGCGC | 1 cut(s) | 728 |
| BssSI | CACGAG | 2 cut(s) | 446, 648 |
| BssT1I | CCWWGG | 3 cut(s) | 87, 240, 624 |
| Bst2BI | CACGAG | 2 cut(s) | 446, 648 |
| Bst2UI | CCWGG | 2 cut(s) | 737, 823 |
| Bst4CI | ACNGT | 2 cut(s) | 530, 918 |
| Bst6I | CTCTTC | 5 cut(s) | 354, 660, 992, 1101, 1392 |
| BstBAI | YACGTR | 1 cut(s) | 851 |
| BstBI | TTCGAA | 1 cut(s) | 1514 |
| BstC8I | GCNNGC | 6 cut(s) | 114, 135, 291, 730, 865, 1140 |
| BstDEI | CTNAG | 7 cut(s) | 277, 471, 683, 700, 899, 1680, 1714 |
| BstF5I | GGATG | 1 cut(s) | 620 |
| BstFNI | CGCG | 3 cut(s) | 730, 732, 1155 |
| BstHHI | GCGC | 4 cut(s) | 203, 730, 732, 1155 |
| BstMAI | GTCTC | 6 cut(s) | 280, 506, 1290, 1362, 1560, 1715 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 217, 860, 869 |
| BstNI | CCWGG | 2 cut(s) | 737, 823 |
| BstNSI | RCATGY | 2 cut(s) | 867, 1649 |
| BstSCI | CCNGG | 3 cut(s) | 137, 735, 821 |
| BstSFI | CTRYAG | 1 cut(s) | 858 |
| BstSLI | GKGCMC | 1 cut(s) | 1066 |
| BstUI | CGCG | 3 cut(s) | 730, 732, 1155 |
| BstV1I | GCAGC | 6 cut(s) | 54, 244, 682, 685, 830, 841 |
| BstV2I | GAAGAC | 4 cut(s) | 63, 75, 173, 1062 |
| BstX2I | RGATCY | 4 cut(s) | 394, 431, 1256, 1697 |
| BstYI | RGATCY | 4 cut(s) | 394, 431, 1256, 1697 |
| BsuRI | GGCC | 4 cut(s) | 116, 612, 1064, 1319 |
| BtsCI | GGATG | 1 cut(s) | 620 |
| BtsI | GCAGTG | 1 cut(s) | 1282 |
| BtsIMutI | CAGTG | 2 cut(s) | 535, 1282 |
| Cac8I | GCNNGC | 6 cut(s) | 114, 135, 291, 730, 865, 1140 |
| CciI | TCATGA | 1 cut(s) | 792 |
| CfoI | GCGC | 4 cut(s) | 203, 730, 732, 1155 |
| Cfr10I | RCCGGY | 2 cut(s) | 151, 1607 |
| Cfr13I | GGNCC | 3 cut(s) | 114, 1062, 1063 |
| CseI | GACGC | 1 cut(s) | 721 |
| Csp6I | GTAC | 4 cut(s) | 100, 147, 787, 1192 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1594, 1629 |
| CviAII | CATG | 6 cut(s) | 208, 268, 793, 864, 1450, 1646 |
| CviQI | GTAC | 4 cut(s) | 100, 147, 787, 1192 |
| DdeI | CTNAG | 7 cut(s) | 277, 471, 683, 700, 899, 1680, 1714 |
| DraI | TTTAAA | 1 cut(s) | 1543 |
| Eam1104I | CTCTTC | 5 cut(s) | 354, 660, 992, 1101, 1392 |
| EarI | CTCTTC | 5 cut(s) | 354, 660, 992, 1101, 1392 |
| Ecl136II | GAGCTC | 1 cut(s) | 631 |
| Eco130I | CCWWGG | 3 cut(s) | 87, 240, 624 |
| Eco147I | AGGCCT | 1 cut(s) | 1319 |
| Eco24I | GRGCYC | 3 cut(s) | 182, 633, 1066 |
| Eco31I | GGTCTC | 1 cut(s) | 1560 |
| Eco53kI | GAGCTC | 1 cut(s) | 631 |
| Eco57I | CTGAAG | 3 cut(s) | 1118, 1250, 1524 |
| EcoICRI | GAGCTC | 1 cut(s) | 631 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1062 |
| EcoRI | GAATTC | 1 cut(s) | 477 |
| EcoRII | CCWGG | 2 cut(s) | 735, 821 |
| EcoT14I | CCWWGG | 3 cut(s) | 87, 240, 624 |
| EcoT22I | ATGCAT | 2 cut(s) | 581, 869 |
| EcoT38I | GRGCYC | 3 cut(s) | 182, 633, 1066 |
| ErhI | CCWWGG | 3 cut(s) | 87, 240, 624 |
| Esp3I | CGTCTC | 1 cut(s) | 1362 |
| FaeI | CATG | 6 cut(s) | 211, 271, 796, 867, 1453, 1649 |
| FaqI | GGGAC | 1 cut(s) | 305 |
| FatI | CATG | 6 cut(s) | 207, 267, 792, 863, 1449, 1645 |
| FauI | CCCGC | 1 cut(s) | 105 |
| FauNDI | CATATG | 2 cut(s) | 556, 1586 |
| FbaI | TGATCA | 1 cut(s) | 490 |
| FokI | GGATG | 1 cut(s) | 607 |
| FriOI | GRGCYC | 3 cut(s) | 182, 633, 1066 |
| FspBI | CTAG | 2 cut(s) | 1139, 1241 |
| GlaI | GCGC | 4 cut(s) | 202, 729, 731, 1154 |
| GsuI | CTGGAG | 2 cut(s) | 456, 1272 |
| HaeIII | GGCC | 4 cut(s) | 116, 612, 1064, 1319 |
| HapII | CCGG | 3 cut(s) | 138, 152, 1608 |
| HgaI | GACGC | 1 cut(s) | 721 |
| HhaI | GCGC | 4 cut(s) | 203, 730, 732, 1155 |
| Hin1II | CATG | 6 cut(s) | 211, 271, 796, 867, 1453, 1649 |
| Hin6I | GCGC | 4 cut(s) | 201, 728, 730, 1153 |
| HinP1I | GCGC | 4 cut(s) | 201, 728, 730, 1153 |
| HindIII | AAGCTT | 1 cut(s) | 929 |
| HinfI | GANTC | 9 cut(s) | 341, 514, 551, 1088, 1283, 1302, 1415, 1511, 1733 |
| HpaII | CCGG | 3 cut(s) | 138, 152, 1608 |
| HphI | GGTGA | 3 cut(s) | 1280, 1292, 1433 |
| Hpy166II | GTNNAC | 1 cut(s) | 443 |
| Hpy188I | TCNGA | 7 cut(s) | 418, 474, 755, 1093, 1170, 1183, 1564 |
| Hpy8I | GTNNAC | 1 cut(s) | 443 |
| Hpy99I | CGWCG | 2 cut(s) | 128, 251 |
| HpyAV | CCTTC | 6 cut(s) | 217, 253, 589, 1265, 1358, 1545 |
| HpyCH4III | ACNGT | 2 cut(s) | 530, 918 |
| HpyCH4IV | ACGT | 2 cut(s) | 299, 850 |
| HpyCH4V | TGCA | 8 cut(s) | 10, 42, 579, 774, 806, 867, 1388, 1649 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 217, 860, 869 |
| HpyF3I | CTNAG | 7 cut(s) | 277, 471, 683, 700, 899, 1680, 1714 |
| HpySE526I | ACGT | 2 cut(s) | 299, 850 |
| Hsp92II | CATG | 6 cut(s) | 211, 271, 796, 867, 1453, 1649 |
| HspAI | GCGC | 4 cut(s) | 201, 728, 730, 1153 |
| Ksp22I | TGATCA | 1 cut(s) | 490 |
| LguI | GCTCTTC | 1 cut(s) | 660 |
| LmnI | GCTCC | 3 cut(s) | 628, 835, 1467 |
| Lsp1109I | GCAGC | 6 cut(s) | 54, 244, 682, 685, 830, 841 |
| LweI | GCATC | 2 cut(s) | 1489, 1666 |
| MaeI | CTAG | 2 cut(s) | 1139, 1241 |
| MaeII | ACGT | 2 cut(s) | 299, 850 |
| MaeIII | GTNAC | 1 cut(s) | 524 |
| MfeI | CAATTG | 2 cut(s) | 196, 746 |
| MflI | RGATCY | 4 cut(s) | 394, 431, 1256, 1697 |
| MhlI | GDGCHC | 3 cut(s) | 182, 633, 1066 |
| MluCI | AATT | 8 cut(s) | 196, 386, 477, 534, 746, 780, 1336, 1538 |
| MlyI | GAGTC | 3 cut(s) | 508, 1097, 1292 |
| MmeI | TCCRAC | 1 cut(s) | 1071 |
| Mph1103I | ATGCAT | 2 cut(s) | 581, 869 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1098, 1131 |
| MseI | TTAA | 4 cut(s) | 582, 1325, 1542, 1592 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1266, 1650 |
| MspI | CCGG | 3 cut(s) | 138, 152, 1608 |
| MspR9I | CCNGG | 3 cut(s) | 139, 737, 823 |
| MunI | CAATTG | 2 cut(s) | 196, 746 |
| Mva1269I | GAATGC | 2 cut(s) | 235, 676 |
| MvaI | CCWGG | 2 cut(s) | 737, 823 |
| MvnI | CGCG | 3 cut(s) | 730, 732, 1155 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 217, 860, 869 |
| NciI | CCSGG | 1 cut(s) | 139 |
| NdeI | CATATG | 2 cut(s) | 556, 1586 |
| NheI | GCTAGC | 1 cut(s) | 1138 |
| NlaIII | CATG | 6 cut(s) | 211, 271, 796, 867, 1453, 1649 |
| NlaIV | GGNNCC | 2 cut(s) | 156, 1064 |
| NmuCI | GTSAC | 1 cut(s) | 524 |
| NsiI | ATGCAT | 2 cut(s) | 581, 869 |
| NspI | RCATGY | 2 cut(s) | 867, 1649 |
| NspV | TTCGAA | 1 cut(s) | 1514 |
| PaeI | GCATGC | 1 cut(s) | 867 |
| PagI | TCATGA | 1 cut(s) | 792 |
| PauI | GCGCGC | 1 cut(s) | 728 |
| PceI | AGGCCT | 1 cut(s) | 1319 |
| PciSI | GCTCTTC | 1 cut(s) | 660 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 27 |
| PctI | GAATGC | 2 cut(s) | 235, 676 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1098, 1131 |
| PfeI | GAWTC | 6 cut(s) | 341, 551, 1302, 1415, 1511, 1733 |
| PleI | GAGTC | 3 cut(s) | 508, 1096, 1291 |
| PpsI | GAGTC | 3 cut(s) | 508, 1096, 1291 |
| Ppu21I | YACGTR | 1 cut(s) | 851 |
| Psp124BI | GAGCTC | 1 cut(s) | 633 |
| Psp6I | CCWGG | 2 cut(s) | 735, 821 |
| PspGI | CCWGG | 2 cut(s) | 735, 821 |
| PspN4I | GGNNCC | 2 cut(s) | 156, 1064 |
| PspOMI | GGGCCC | 1 cut(s) | 1062 |
| PspPI | GGNCC | 3 cut(s) | 114, 1062, 1063 |
| PsuI | RGATCY | 4 cut(s) | 394, 431, 1256, 1697 |
| PteI | GCGCGC | 1 cut(s) | 728 |
| RsaI | GTAC | 4 cut(s) | 101, 148, 788, 1193 |
| RsaNI | GTAC | 4 cut(s) | 100, 147, 787, 1192 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1266, 1650 |
| SacI | GAGCTC | 1 cut(s) | 633 |
| SapI | GCTCTTC | 1 cut(s) | 660 |
| SaqAI | TTAA | 4 cut(s) | 582, 1325, 1542, 1592 |
| Sau96I | GGNCC | 3 cut(s) | 114, 1062, 1063 |
| SchI | GAGTC | 3 cut(s) | 508, 1097, 1292 |
| ScrFI | CCNGG | 3 cut(s) | 139, 737, 823 |
| SduI | GDGCHC | 3 cut(s) | 182, 633, 1066 |
| SfaNI | GCATC | 2 cut(s) | 1489, 1666 |
| SfcI | CTRYAG | 1 cut(s) | 858 |
| SfuI | TTCGAA | 1 cut(s) | 1514 |
| SgrAI | CRCCGGYG | 1 cut(s) | 151 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1266, 1650 |
| SmlI | CTYRAG | 4 cut(s) | 986, 1252, 1313, 1638 |
| SmoI | CTYRAG | 4 cut(s) | 986, 1252, 1313, 1638 |
| SphI | GCATGC | 1 cut(s) | 867 |
| Sse9I | AATT | 8 cut(s) | 196, 386, 477, 534, 746, 780, 1336, 1538 |
| SseBI | AGGCCT | 1 cut(s) | 1319 |
| SsiI | CCGC | 7 cut(s) | 16, 112, 191, 294, 380, 464, 1214 |
| SspMI | CTAG | 2 cut(s) | 1139, 1241 |
| SstI | GAGCTC | 1 cut(s) | 633 |
| StuI | AGGCCT | 1 cut(s) | 1319 |
| StyD4I | CCNGG | 3 cut(s) | 137, 735, 821 |
| StyI | CCWWGG | 3 cut(s) | 87, 240, 624 |
| TaaI | ACNGT | 2 cut(s) | 530, 918 |
| TaiI | ACGT | 2 cut(s) | 302, 853 |
| TaqI | TCGA | 4 cut(s) | 30, 143, 571, 1514 |
| TasI | AATT | 8 cut(s) | 196, 386, 477, 534, 746, 780, 1336, 1538 |
| TauI | GCSGC | 4 cut(s) | 193, 296, 382, 1217 |
| TfiI | GAWTC | 6 cut(s) | 341, 551, 1302, 1415, 1511, 1733 |
| Tru1I | TTAA | 4 cut(s) | 582, 1325, 1542, 1592 |
| Tru9I | TTAA | 4 cut(s) | 582, 1325, 1542, 1592 |
| TscAI | CASTG | 2 cut(s) | 535, 1282 |
| TseFI | GTSAC | 1 cut(s) | 524 |
| TseI | GCWGC | 6 cut(s) | 42, 232, 670, 673, 818, 854 |
| Tsp45I | GTSAC | 1 cut(s) | 524 |
| TspDTI | ATGAA | 8 cut(s) | 330, 564, 731, 809, 1187, 1340, 1421, 1422 |
| TspGWI | ACGGA | 2 cut(s) | 926, 1710 |
| TspRI | CASTG | 2 cut(s) | 535, 1282 |
| XapI | RAATTY | 3 cut(s) | 386, 477, 1336 |
| XceI | RCATGY | 2 cut(s) | 867, 1649 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1098, 1131 |
| XspI | CTAG | 2 cut(s) | 1139, 1241 |
| Zsp2I | ATGCAT | 2 cut(s) | 581, 869 |