Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G62350 AT1G62350 AT1G62350 |
| fragaria_vesca | FvH4_3g28730 |
| malus_domestica | MD11G1184300.v1.1 MD11G1184600.v1.1 |
| prunus_persica | Prupe.4G265100_v2.0.a1 Prupe.4G265100_v2.0.a1 Prupe.4G265100_v2.0.a1 Prupe.4G265100_v2.0.a1 |
| pyrus_communis | pycom12g08820 |
| rosa_chinensis | RchiOBHm_Chr5g0052331 |
| rosa_laevigata | RLG00000034824 |
| rosa_multiflora | Rmu_sc0000968.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00028240 |
| rosa_rugosa | Rorug05G0272700 Rorug05G0272800 Rorug05G0272800 Rorug05G0272800 Rorug05G0272800 |
| rosa_samantha | Rh5AG345300 Rh5BG356400 Rh5CG381700 Rh5DG371500 |
| rosa_wichuraiana | Rw5G032590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 254 |
| AcuI | CTGAAG | 2 cut(s) | 161, 405 |
| AfaI | GTAC | 1 cut(s) | 311 |
| AflIII | ACRYGT | 1 cut(s) | 60 |
| AgsI | TTSAA | 2 cut(s) | 295, 398 |
| AluBI | AGCT | 1 cut(s) | 352 |
| AluI | AGCT | 1 cut(s) | 352 |
| AlwI | GGATC | 1 cut(s) | 254 |
| AoxI | GGCC | 1 cut(s) | 298 |
| AspS9I | GGNCC | 1 cut(s) | 298 |
| AsuHPI | GGTGA | 3 cut(s) | 246, 251, 343 |
| BbsI | GAAGAC | 2 cut(s) | 393, 405 |
| BceAI | ACGGC | 1 cut(s) | 262 |
| BclI | TGATCA | 1 cut(s) | 163 |
| BfaI | CTAG | 1 cut(s) | 200 |
| BglII | AGATCT | 1 cut(s) | 136 |
| BmgT120I | GGNCC | 1 cut(s) | 298 |
| BmsI | GCATC | 1 cut(s) | 78 |
| BpiI | GAAGAC | 2 cut(s) | 393, 405 |
| BsaWI | WCCGGW | 1 cut(s) | 55 |
| BseGI | GGATG | 1 cut(s) | 118 |
| BseMII | CTCAG | 1 cut(s) | 311 |
| BseRI | GAGGAG | 1 cut(s) | 293 |
| BshFI | GGCC | 1 cut(s) | 300 |
| BsiSI | CCGG | 1 cut(s) | 56 |
| BslFI | GGGAC | 2 cut(s) | 89, 194 |
| BsmFI | GGGAC | 2 cut(s) | 89, 194 |
| BsnI | GGCC | 1 cut(s) | 300 |
| Bsp143I | GATC | 4 cut(s) | 136, 163, 259, 366 |
| BspANI | GGCC | 1 cut(s) | 300 |
| BspCNI | CTCAG | 1 cut(s) | 312 |
| BspHI | TCATGA | 1 cut(s) | 186 |
| BspPI | GGATC | 1 cut(s) | 254 |
| BssMI | GATC | 4 cut(s) | 136, 163, 259, 366 |
| Bst6I | CTCTTC | 1 cut(s) | 137 |
| BstC8I | GCNNGC | 1 cut(s) | 93 |
| BstDEI | CTNAG | 2 cut(s) | 217, 320 |
| BstF5I | GGATG | 1 cut(s) | 118 |
| BstKTI | GATC | 4 cut(s) | 139, 166, 262, 369 |
| BstMBI | GATC | 4 cut(s) | 136, 163, 259, 366 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 88 |
| BstNSI | RCATGY | 2 cut(s) | 64, 82 |
| BstV2I | GAAGAC | 2 cut(s) | 393, 405 |
| BstX2I | RGATCY | 1 cut(s) | 136 |
| BstYI | RGATCY | 1 cut(s) | 136 |
| BsuRI | GGCC | 1 cut(s) | 300 |
| BtsCI | GGATG | 1 cut(s) | 118 |
| BtsI | GCAGTG | 1 cut(s) | 272 |
| BtsIMutI | CAGTG | 1 cut(s) | 272 |
| Cac8I | GCNNGC | 1 cut(s) | 93 |
| CciI | TCATGA | 1 cut(s) | 186 |
| Cfr13I | GGNCC | 1 cut(s) | 298 |
| Csp6I | GTAC | 1 cut(s) | 310 |
| CviAII | CATG | 3 cut(s) | 61, 79, 187 |
| CviJI | RGCY | 3 cut(s) | 194, 300, 352 |
| CviKI_1 | RGCY | 3 cut(s) | 194, 300, 352 |
| CviQI | GTAC | 1 cut(s) | 310 |
| DdeI | CTNAG | 2 cut(s) | 217, 320 |
| DpnI | GATC | 4 cut(s) | 138, 165, 261, 368 |
| DpnII | GATC | 4 cut(s) | 136, 163, 259, 366 |
| Eam1104I | CTCTTC | 1 cut(s) | 137 |
| EarI | CTCTTC | 1 cut(s) | 137 |
| Eco57I | CTGAAG | 2 cut(s) | 161, 405 |
| EcoO109I | RGGNCCY | 1 cut(s) | 298 |
| FaeI | CATG | 3 cut(s) | 64, 82, 190 |
| FaqI | GGGAC | 2 cut(s) | 89, 194 |
| FatI | CATG | 3 cut(s) | 60, 78, 186 |
| FbaI | TGATCA | 1 cut(s) | 163 |
| FokI | GGATG | 1 cut(s) | 125 |
| FspBI | CTAG | 1 cut(s) | 200 |
| HaeIII | GGCC | 1 cut(s) | 300 |
| HapII | CCGG | 1 cut(s) | 56 |
| Hin1II | CATG | 3 cut(s) | 64, 82, 190 |
| HpaII | CCGG | 1 cut(s) | 56 |
| HphI | GGTGA | 3 cut(s) | 246, 251, 343 |
| Hpy188I | TCNGA | 1 cut(s) | 141 |
| Hpy188III | TCNNGA | 3 cut(s) | 16, 187, 359 |
| HpyAV | CCTTC | 3 cut(s) | 118, 289, 322 |
| HpyCH4V | TGCA | 1 cut(s) | 95 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 88 |
| HpyF3I | CTNAG | 2 cut(s) | 217, 320 |
| Hsp92II | CATG | 3 cut(s) | 64, 82, 190 |
| Ksp22I | TGATCA | 1 cut(s) | 163 |
| Kzo9I | GATC | 4 cut(s) | 136, 163, 259, 366 |
| LmnI | GCTCC | 1 cut(s) | 349 |
| LpnPI | CCDG | 7 cut(s) | 29, 58, 69, 270, 327, 372, 396 |
| LweI | GCATC | 1 cut(s) | 78 |
| MaeI | CTAG | 1 cut(s) | 200 |
| MalI | GATC | 4 cut(s) | 138, 165, 261, 368 |
| MboI | GATC | 4 cut(s) | 136, 163, 259, 366 |
| MboII | GAAGA | 4 cut(s) | 154, 398, 410, 437 |
| MflI | RGATCY | 1 cut(s) | 136 |
| MnlI | CCTC | 7 cut(s) | 142, 183, 214, 273, 311, 314, 315 |
| MslI | CAYNNNNRTG | 1 cut(s) | 83 |
| MspI | CCGG | 1 cut(s) | 56 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 88 |
| NdeII | GATC | 4 cut(s) | 136, 163, 259, 366 |
| NlaIII | CATG | 3 cut(s) | 64, 82, 190 |
| NspI | RCATGY | 2 cut(s) | 64, 82 |
| PagI | TCATGA | 1 cut(s) | 186 |
| PciI | ACATGT | 1 cut(s) | 60 |
| PscI | ACATGT | 1 cut(s) | 60 |
| PspPI | GGNCC | 1 cut(s) | 298 |
| PsuI | RGATCY | 1 cut(s) | 136 |
| RsaI | GTAC | 1 cut(s) | 311 |
| RsaNI | GTAC | 1 cut(s) | 310 |
| RseI | CAYNNNNRTG | 1 cut(s) | 83 |
| Sau3AI | GATC | 4 cut(s) | 136, 163, 259, 366 |
| Sau96I | GGNCC | 1 cut(s) | 298 |
| SetI | ASST | 6 cut(s) | 111, 129, 259, 333, 354, 385 |
| SfaNI | GCATC | 1 cut(s) | 78 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 83 |
| SspI | AATATT | 1 cut(s) | 291 |
| SspMI | CTAG | 1 cut(s) | 200 |
| TscAI | CASTG | 1 cut(s) | 279 |
| TspDTI | ATGAA | 1 cut(s) | 129 |
| TspRI | CASTG | 1 cut(s) | 279 |
| XceI | RCATGY | 2 cut(s) | 64, 82 |
| XspI | CTAG | 1 cut(s) | 200 |