Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0007374

Physical Location & Seq

Genomic Coordinates Forward (+)

30780866 .. 30789042

Gene Structure 8177 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0272800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2253 bp

ATGGACCGTCCACCGGACACCATGGTTGAAGAGAAAGAAGAGCTCATGGTTTCACCTACTGGTGGAGACCCATTTCACAAAATAGCCCATTTTCTGAAACCGATAGTGCCTTCCACCGTCTTTAAGTTCCCTAATGAATCTTTCTCCTCCCTCCCTCCACATTTTGGGCCAAGAGAATGCCCTTTAGAGGTAGAATTCCCTGGGTGGAGAATTCAGCTGCAAGAAGATTGGACTGCTTGGGTTGGCCGATTGGCTTCACTTCACCAATCCACATGGAAGAAAGCTGGTATATATGAAGCAATCTTCAACTCGACGTACCAAATTAGAAGAAACACCGAGTTGATATATGGGTTGGCAGAGAAATGGTGTTCTGAAACTAATAGTTTCATTTTTGCATGGGGTGAAGCAACAATCACATTAGAGGATTTGATGGTGATGGGAGGCTATTCCGTTCTTGGAGAGTCGATTTTCAACCCTCTTGAAAACAGAGAGCTCAAGGAATTAGAAGAGAAACTTAATGAAGTGAGAACAGAAATAAACAGGGGTGCGTCGCGCAGACCTTCCGCTAGCTTATGGTTGAAGAAGTTCAAAAACAATGGCAGCGAATTGGAGCATGAAGCATTTCTTGTGATGTGGTTGTGCAGGTATGTTTTTCCGGGTACTTATAATACAATACAAAAGGGTGTCTTTTCCATTGCAATTCATTTAGCTAGGGGCACCCGAGTTGCACTTGCACCCGCTATTCTTGCTAGCATTTATAAAGATTTGAGTTTATTGAATTCAGCAATTGTGGATTCAAGCAAGTTAGAGACAGGTTGTGATGGTGTTATGAAAGTCAGCATCAAGTCACCATTTCAATTTGTTCAGCTTTGGGCGTGGGAAAGATTTGTAGAGCTAAGTCCTAGCCCCGGAGTGATCAATCTTGGGCAGCCAAGATTGGCTCGATGGGACAAAGTAAATGGTGTGGAAGTTGAAAACTTGAGGAGGGTTTTAGACTCCGCCGGAGATGGTTTCAAGTGGCGTCCTTATGCCTTGACCACTGAAAACTGGCAGTTGCCTAAATACTATCCTGAAGAGGAAATGCATGTATCAGATTGTTCAGGTTTGGATGATGAGTTGCATTCATTTTTCAGATGCTTGAGGGCCAGTGAGCTGTCTGGATTTGGTACTATTGAGCAGTACCTTCCACATAGAGTAGCAATGCAGTTTGGATTTGATCAAGACATTCCATGTGTTGTCGCTCGATCCAATCCGAGTTCTGATATAGCTTGGAGTCATTACATCAAGAAATTTGGGAATGCAAGTTTATATGTTCCATCCAGGTTTTTGAAGGCAGATATAAGCACAAGATACTTGAAGTGGTGGAAGGAATCAATGTTGGGTCTCAAAAAGACTATCACGCCAAAAGTAAAGAAATCAAAGTGTATTGGAGGATCACAAATGAGGGCTAAACCATCCCCTGTACATCCTGGTTCTGCCCCCAAGAAAGCTGTAGAAGGATCTAAGAAATGGAAGAAGAATCATGATTTCATCCTTCCTCCTGTTTCTAATCTAAAGGATTCTGAAAATTTGGAGCTGCTTTCAAAAGGTAATGAAGGTAATGATTCCCTTTTTCCTCCAGGATTTCCTCGCAAATGTAGTAGAATGGAAGCCGAAGGTTCAATGGATGAAGATGGACTAACTTTATCAGAACTTATGAAATATAATAAATTCGGAAGGGTTAATATGAGAACATGTGGTGACAGTGAAAAATTGCCATGTCAAGTTCAAAATCTGGCATCTTCAAGTTCTGTTCATACTATGAAGTCAGAAAGGTTTGAAGCTGGAGGTCCAATGGATGAAGCACAAATTATTAAATGTCATTCAAAACAAAAAAATGTCGAAACTAGAACATGTTGTGACAGTGAGAAGTTATCAAGTCGTGTTCAAAATCTGTCATTTTCAATTGCAGCAAGTTCCGCTGATATTATGAAGTCAAAGAGATCGGGAACAGAGGATGTGTTGAATGATGTTTTGATTGAAGGGTCCAAGGCCGACAGAAACTTGAAAAATGTTATTGGGAGTACTGCAAGAAGTTCAGACGTGGCAAGCATCGTTGACAAAGAATGTGCTAGCAACAGCTCTCTAAATGAGAAACGGGTGTCAGTGCTTAAAGATAGGGTCAGCAGGCTTGAAGTTATAATTAGTGTGTTAAAAGCAAATTATTCTGGGAACAAGTTAGAGGAAAAGCTTATGAAACAAGCCCCACTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR

Protein Analysis

750

Amino Acids

84.35

Weight (kDa)

8.51

Isoelectric Point (pI)

41.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PMD	PF10536	96 - 456	8.6e-109	Plant mobile domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007374)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62350 AT1G62350 AT1G62350
fragaria_vesca	FvH4_3g28730
malus_domestica	MD11G1184300.v1.1 MD11G1184600.v1.1
prunus_persica	Prupe.4G265100_v2.0.a1 Prupe.4G265100_v2.0.a1 Prupe.4G265100_v2.0.a1 Prupe.4G265100_v2.0.a1
pyrus_communis	pycom12g08820
rosa_chinensis	RchiOBHm_Chr5g0052331
rosa_laevigata	RLG00000034824
rosa_multiflora	Rmu_sc0000968.1_g000008
rosa_roxburghii	Rroxscaffold_1G00028240
rosa_rugosa	Rorug05G0272700 Rorug05G0272800 Rorug05G0272800 Rorug05G0272800 Rorug05G0272800
rosa_samantha	Rh5AG345300 Rh5BG356400 Rh5CG381700 Rh5DG371500
rosa_wichuraiana	Rw5G032590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	666, 759, 2180
Acc36I	ACCTGC	1 cut(s)	633
AccB1I	GGYRCC	1 cut(s)	716
AccB7I	CCANNNNNTGG	1 cut(s)	164
AccII	CGCG	1 cut(s)	553
AciI	CCGC	4 cut(s)	564, 738, 999, 1959
AclWI	GGATC	3 cut(s)	1239, 1441, 1507
AcoI	YGGCCR	1 cut(s)	244
AcsI	RAATTY	6 cut(s)	194, 210, 778, 1289, 1567, 1709
AcuI	CTGAAG	1 cut(s)	1092
AcyI	GRCGYC	1 cut(s)	1021
AfaI	GTAC	6 cut(s)	317, 661, 1168, 1181, 1464, 2065
AfiI	CCNNNNNNNGG	5 cut(s)	13, 62, 164, 187, 908
AflIII	ACRYGT	2 cut(s)	1733, 1892
AjiI	CACGTC	1 cut(s)	2083
AjnI	CCWGG	4 cut(s)	199, 1319, 1468, 1618
Alw21I	GWGCWC	2 cut(s)	45, 495
Alw26I	GTCTC	3 cut(s)	60, 803, 1388
AlwI	GGATC	3 cut(s)	1239, 1441, 1507
Ama87I	CYCGRG	1 cut(s)	720
AoxI	GGCC	4 cut(s)	167, 244, 1143, 2031
ApeKI	GCWGC	5 cut(s)	217, 600, 928, 1576, 1949
ApoI	RAATTY	6 cut(s)	194, 210, 778, 1289, 1567, 1709
Asp700I	GAANNNNTTC	2 cut(s)	584, 621
AspLEI	GCGC	1 cut(s)	555
AspS9I	GGNCC	5 cut(s)	4, 167, 1143, 1829, 2025
AsuC2I	CCSGG	2 cut(s)	657, 909
AsuHPI	GGTGA	6 cut(s)	45, 254, 413, 445, 840, 1751
AsuNHI	GCTAGC	3 cut(s)	566, 749, 2111
AvaI	CYCGRG	1 cut(s)	720
AvaII	GGWCC	3 cut(s)	4, 1829, 2025
BaeGI	GKGCMC	1 cut(s)	719
BanI	GGYRCC	1 cut(s)	716
BanII	GRGCYC	2 cut(s)	45, 495
Bbv12I	GWGCWC	2 cut(s)	45, 495
BbvI	GCAGC	5 cut(s)	204, 612, 940, 1563, 1961
BccI	CCATC	8 cut(s)	424, 430, 815, 939, 1001, 1324, 1462, 1667
BciT130I	CCWGG	4 cut(s)	201, 1321, 1470, 1620
BclI	TGATCA	2 cut(s)	915, 1216
BcnI	CCSGG	2 cut(s)	657, 909
BcoDI	GTCTC	3 cut(s)	60, 803, 1388
BfaI	CTAG	6 cut(s)	567, 711, 750, 903, 1887, 2112
BfmI	CTRYAG	1 cut(s)	1491
BfuAI	ACCTGC	1 cut(s)	633
BisI	GCNGC	5 cut(s)	218, 601, 929, 1577, 1950
BlsI	GCNGC	5 cut(s)	219, 602, 930, 1578, 1951
BmcAI	AGTACT	1 cut(s)	2065
Bme1390I	CCNGG	6 cut(s)	201, 657, 909, 1321, 1470, 1620
Bme18I	GGWCC	3 cut(s)	4, 1829, 2025
BmeT110I	CYCGRG	1 cut(s)	720
BmgBI	CACGTC	1 cut(s)	2083
BmgT120I	GGNCC	5 cut(s)	4, 167, 1143, 1829, 2025
BmiI	GGNNCC	2 cut(s)	718, 2026
BmrFI	CCNGG	6 cut(s)	201, 657, 909, 1321, 1470, 1620
BmsI	GCATC	4 cut(s)	849, 1124, 1787, 2100
BmtI	GCTAGC	3 cut(s)	570, 753, 2115
BpmI	CTGGAG	2 cut(s)	1602, 1845
BpuEI	CTTGAG	3 cut(s)	479, 1000, 1159
BpuMI	CCSGG	2 cut(s)	657, 909
BsaHI	GRCGYC	1 cut(s)	1021
BsaI	GGTCTC	2 cut(s)	60, 1388
BsaJI	CCNNGG	5 cut(s)	21, 199, 200, 907, 2028
BsaWI	WCCGGW	1 cut(s)	13
Bsc4I	CCNNNNNNNGG	5 cut(s)	13, 62, 164, 187, 908
Bse1I	ACTGG	3 cut(s)	64, 1052, 1146
Bse3DI	GCAATG	2 cut(s)	693, 1206
BseBI	CCWGG	4 cut(s)	201, 1321, 1470, 1620
BseDI	CCNNGG	5 cut(s)	21, 199, 200, 907, 2028
BseGI	GGATG	8 cut(s)	1114, 1316, 1454, 1465, 1530, 1672, 1843, 2002
BseLI	CCNNNNNNNGG	5 cut(s)	13, 62, 164, 187, 908
BseMI	GCAATG	2 cut(s)	693, 1206
BseNI	ACTGG	3 cut(s)	64, 1052, 1146
BseRI	GAGGAG	2 cut(s)	136, 997
BseSI	GKGCMC	1 cut(s)	719
BseXI	GCAGC	5 cut(s)	204, 612, 940, 1563, 1961
BsgI	GTGCAG	1 cut(s)	661
Bsh1236I	CGCG	1 cut(s)	553
BshFI	GGCC	4 cut(s)	169, 246, 1145, 2033
BshNI	GGYRCC	1 cut(s)	716
BsiHKAI	GWGCWC	2 cut(s)	45, 495
BsiHKCI	CYCGRG	1 cut(s)	720
BsiSI	CCGG	4 cut(s)	14, 656, 909, 1002
BslFI	GGGAC	1 cut(s)	962
BslI	CCNNNNNNNGG	5 cut(s)	13, 62, 164, 187, 908
BsmAI	GTCTC	3 cut(s)	60, 803, 1388
BsmFI	GGGAC	1 cut(s)	962
BsmI	GAATGC	3 cut(s)	182, 1120, 1303
BsnI	GGCC	4 cut(s)	169, 246, 1145, 2033
Bso31I	GGTCTC	2 cut(s)	60, 1388
BsoBI	CYCGRG	1 cut(s)	720
Bsp1286I	GDGCHC	3 cut(s)	45, 495, 719
Bsp1407I	TGTACA	1 cut(s)	1462
Bsp143I	GATC	6 cut(s)	915, 1216, 1244, 1433, 1499, 1982
Bsp19I	CCATGG	1 cut(s)	21
BspACI	CCGC	4 cut(s)	564, 738, 999, 1959
BspANI	GGCC	4 cut(s)	169, 246, 1145, 2033
BspFNI	CGCG	1 cut(s)	553
BspHI	TCATGA	1 cut(s)	1522
BspLI	GGNNCC	2 cut(s)	718, 2026
BspMI	ACCTGC	1 cut(s)	633
BspOI	GCTAGC	3 cut(s)	570, 753, 2115
BspPI	GGATC	3 cut(s)	1239, 1441, 1507
BspQI	GCTCTTC	1 cut(s)	33
BspT107I	GGYRCC	1 cut(s)	716
BspTNI	GGTCTC	2 cut(s)	60, 1388
BsrDI	GCAATG	2 cut(s)	693, 1206
BsrGI	TGTACA	1 cut(s)	1462
BsrI	ACTGG	3 cut(s)	64, 1052, 1146
BssECI	CCNNGG	5 cut(s)	21, 199, 200, 907, 2028
BssMI	GATC	6 cut(s)	915, 1216, 1244, 1433, 1499, 1982
BssNI	GRCGYC	1 cut(s)	1021
BssT1I	CCWWGG	2 cut(s)	21, 2028
Bst2UI	CCWGG	4 cut(s)	201, 1321, 1470, 1620
Bst4CI	ACNGT	4 cut(s)	8, 118, 1745, 1904
Bst6I	CTCTTC	4 cut(s)	24, 33, 501, 1068
BstACI	GRCGYC	1 cut(s)	1021
BstAUI	TGTACA	1 cut(s)	1462
BstC8I	GCNNGC	5 cut(s)	568, 751, 2089, 2113, 2168
BstDEI	CTNAG	2 cut(s)	896, 1503
BstDSI	CCRYGG	1 cut(s)	21
BstF5I	GGATG	8 cut(s)	1114, 1316, 1454, 1465, 1530, 1672, 1843, 2002
BstFNI	CGCG	1 cut(s)	553
BstHHI	GCGC	1 cut(s)	555
BstKTI	GATC	6 cut(s)	918, 1219, 1247, 1436, 1502, 1985
BstMAI	GTCTC	3 cut(s)	60, 803, 1388
BstMBI	GATC	6 cut(s)	915, 1216, 1244, 1433, 1499, 1982
BstMWI	GCNNNNNNNGC	2 cut(s)	746, 1958
BstNI	CCWGG	4 cut(s)	201, 1321, 1470, 1620
BstNSI	RCATGY	3 cut(s)	1088, 1737, 1896
BstSCI	CCNGG	6 cut(s)	199, 655, 907, 1319, 1468, 1618
BstSFI	CTRYAG	1 cut(s)	1491
BstSLI	GKGCMC	1 cut(s)	719
BstUI	CGCG	1 cut(s)	553
BstV1I	GCAGC	5 cut(s)	204, 612, 940, 1563, 1961
BstX2I	RGATCY	1 cut(s)	1499
BstYI	RGATCY	1 cut(s)	1499
BsuRI	GGCC	4 cut(s)	169, 246, 1145, 2033
BtgI	CCRYGG	1 cut(s)	21
BtrI	CACGTC	1 cut(s)	2083
BtsCI	GGATG	8 cut(s)	1114, 1316, 1454, 1465, 1530, 1672, 1843, 2002
BtsIMutI	CAGTG	5 cut(s)	1038, 1153, 1750, 1909, 2151
BveI	ACCTGC	1 cut(s)	633
Cac8I	GCNNGC	5 cut(s)	568, 751, 2089, 2113, 2168
CciI	TCATGA	1 cut(s)	1522
CfoI	GCGC	1 cut(s)	555
Cfr13I	GGNCC	5 cut(s)	4, 167, 1143, 1829, 2025
CseI	GACGC	2 cut(s)	537, 1010
Csp6I	GTAC	6 cut(s)	316, 660, 1167, 1180, 1463, 2064
CviQI	GTAC	6 cut(s)	316, 660, 1167, 1180, 1463, 2064
DdeI	CTNAG	2 cut(s)	896, 1503
DpnI	GATC	6 cut(s)	917, 1218, 1246, 1435, 1501, 1984
DpnII	GATC	6 cut(s)	915, 1216, 1244, 1433, 1499, 1982
EaeI	YGGCCR	1 cut(s)	244
Eam1104I	CTCTTC	4 cut(s)	24, 33, 501, 1068
EarI	CTCTTC	4 cut(s)	24, 33, 501, 1068
EciI	GGCGGA	1 cut(s)	988
Ecl136II	GAGCTC	2 cut(s)	43, 493
Eco130I	CCWWGG	2 cut(s)	21, 2028
Eco24I	GRGCYC	2 cut(s)	45, 495
Eco31I	GGTCTC	2 cut(s)	60, 1388
Eco47I	GGWCC	3 cut(s)	4, 1829, 2025
Eco53kI	GAGCTC	2 cut(s)	43, 493
Eco57I	CTGAAG	1 cut(s)	1092
Eco88I	CYCGRG	1 cut(s)	720
EcoICRI	GAGCTC	2 cut(s)	43, 493
EcoRI	GAATTC	3 cut(s)	194, 210, 778
EcoRII	CCWGG	4 cut(s)	199, 1319, 1468, 1618
EcoT14I	CCWWGG	2 cut(s)	21, 2028
EcoT22I	ATGCAT	1 cut(s)	1086
EcoT38I	GRGCYC	2 cut(s)	45, 495
ErhI	CCWWGG	2 cut(s)	21, 2028
FalI	AAGNNNNNCTT	6 cut(s)	498, 530, 609, 641, 671, 703
FaqI	GGGAC	1 cut(s)	962
FauI	CCCGC	1 cut(s)	745
FbaI	TGATCA	2 cut(s)	915, 1216
Fnu4HI	GCNGC	5 cut(s)	218, 601, 929, 1577, 1950
FokI	GGATG	8 cut(s)	1121, 1303, 1441, 1452, 1517, 1679, 1850, 2009
FriOI	GRGCYC	2 cut(s)	45, 495
Fsp4HI	GCNGC	5 cut(s)	218, 601, 929, 1577, 1950
FspBI	CTAG	6 cut(s)	567, 711, 750, 903, 1887, 2112
GlaI	GCGC	1 cut(s)	554
GluI	GCNGC	5 cut(s)	218, 601, 929, 1577, 1950
GsuI	CTGGAG	2 cut(s)	1602, 1845
HaeIII	GGCC	4 cut(s)	169, 246, 1145, 2033
HapII	CCGG	4 cut(s)	14, 656, 909, 1002
HgaI	GACGC	2 cut(s)	537, 1010
HhaI	GCGC	1 cut(s)	555
Hin1I	GRCGYC	1 cut(s)	1021
Hin6I	GCGC	1 cut(s)	553
HinP1I	GCGC	1 cut(s)	553
HincII	GTYRAC	1 cut(s)	2098
HindII	GTYRAC	1 cut(s)	2098
HindIII	AAGCTT	1 cut(s)	2228
HinfI	GANTC	9 cut(s)	137, 461, 794, 995, 1273, 1370, 1519, 1559, 1604
HpaII	CCGG	4 cut(s)	14, 656, 909, 1002
HphI	GGTGA	6 cut(s)	45, 254, 413, 445, 840, 1751
Hpy166II	GTNNAC	2 cut(s)	11, 2098
Hpy188III	TCNNGA	7 cut(s)	479, 1070, 1158, 1220, 1285, 1523, 1986
Hpy8I	GTNNAC	2 cut(s)	11, 2098
Hpy99I	CGWCG	2 cut(s)	316, 553
HpyCH4III	ACNGT	4 cut(s)	8, 118, 1745, 1904
HpyCH4IV	ACGT	2 cut(s)	314, 2082
HpyF10VI	GCNNNNNNNGC	2 cut(s)	746, 1958
HpyF3I	CTNAG	2 cut(s)	896, 1503
HpySE526I	ACGT	2 cut(s)	314, 2082
Hsp92I	GRCGYC	1 cut(s)	1021
HspAI	GCGC	1 cut(s)	553
Ksp22I	TGATCA	2 cut(s)	915, 1216
Kzo9I	GATC	6 cut(s)	915, 1216, 1244, 1433, 1499, 1982
LguI	GCTCTTC	1 cut(s)	33
LmnI	GCTCC	2 cut(s)	610, 1573
Lsp1109I	GCAGC	5 cut(s)	204, 612, 940, 1563, 1961
LweI	GCATC	4 cut(s)	849, 1124, 1787, 2100
MaeI	CTAG	6 cut(s)	567, 711, 750, 903, 1887, 2112
MaeII	ACGT	2 cut(s)	314, 2082
MaeIII	GTNAC	3 cut(s)	846, 1739, 1898
MalI	GATC	6 cut(s)	917, 1218, 1246, 1435, 1501, 1984
MboI	GATC	6 cut(s)	915, 1216, 1244, 1433, 1499, 1982
MfeI	CAATTG	2 cut(s)	786, 1944
MflI	RGATCY	1 cut(s)	1499
MhlI	GDGCHC	3 cut(s)	45, 495, 719
MlyI	GAGTC	3 cut(s)	470, 989, 1282
Mph1103I	ATGCAT	1 cut(s)	1086
MroXI	GAANNNNTTC	2 cut(s)	584, 621
MseI	TTAA	6 cut(s)	123, 516, 1722, 1854, 2151, 2192
MspA1I	CMGCKG	2 cut(s)	217, 1961
MspI	CCGG	4 cut(s)	14, 656, 909, 1002
MspR9I	CCNGG	6 cut(s)	201, 657, 909, 1321, 1470, 1620
MunI	CAATTG	2 cut(s)	786, 1944
Mva1269I	GAATGC	3 cut(s)	182, 1120, 1303
MvaI	CCWGG	4 cut(s)	201, 1321, 1470, 1620
MvnI	CGCG	1 cut(s)	553
MwoI	GCNNNNNNNGC	2 cut(s)	746, 1958
NciI	CCSGG	2 cut(s)	657, 909
NcoI	CCATGG	1 cut(s)	21
NdeII	GATC	6 cut(s)	915, 1216, 1244, 1433, 1499, 1982
NheI	GCTAGC	3 cut(s)	566, 749, 2111
NlaIV	GGNNCC	2 cut(s)	718, 2026
NmuCI	GTSAC	3 cut(s)	846, 1739, 1898
NsiI	ATGCAT	1 cut(s)	1086
NspI	RCATGY	3 cut(s)	1088, 1737, 1896
PagI	TCATGA	1 cut(s)	1522
PasI	CCCWGGG	1 cut(s)	200
PciI	ACATGT	2 cut(s)	1733, 1892
PciSI	GCTCTTC	1 cut(s)	33
PctI	GAATGC	3 cut(s)	182, 1120, 1303
PdmI	GAANNNNTTC	2 cut(s)	584, 621
PfeI	GAWTC	6 cut(s)	137, 794, 1370, 1519, 1559, 1604
PflMI	CCANNNNNTGG	1 cut(s)	164
PfoI	TCCNGGA	1 cut(s)	1618
PkrI	GCNGC	5 cut(s)	219, 602, 930, 1578, 1951
PleI	GAGTC	3 cut(s)	469, 989, 1281
PpsI	GAGTC	3 cut(s)	469, 989, 1281
PscI	ACATGT	2 cut(s)	1733, 1892
PsiI	TTATAA	3 cut(s)	666, 759, 2180
Psp124BI	GAGCTC	2 cut(s)	45, 495
Psp6I	CCWGG	4 cut(s)	199, 1319, 1468, 1618
PspGI	CCWGG	4 cut(s)	199, 1319, 1468, 1618
PspN4I	GGNNCC	2 cut(s)	718, 2026
PspPI	GGNCC	5 cut(s)	4, 167, 1143, 1829, 2025
PsuI	RGATCY	1 cut(s)	1499
PvuII	CAGCTG	1 cut(s)	217
RsaI	GTAC	6 cut(s)	317, 661, 1168, 1181, 1464, 2065
RsaNI	GTAC	6 cut(s)	316, 660, 1167, 1180, 1463, 2064
SacI	GAGCTC	2 cut(s)	45, 495
SapI	GCTCTTC	1 cut(s)	33
SaqAI	TTAA	6 cut(s)	123, 516, 1722, 1854, 2151, 2192
SatI	GCNGC	5 cut(s)	218, 601, 929, 1577, 1950
Sau3AI	GATC	6 cut(s)	915, 1216, 1244, 1433, 1499, 1982
Sau96I	GGNCC	5 cut(s)	4, 167, 1143, 1829, 2025
ScaI	AGTACT	1 cut(s)	2065
SchI	GAGTC	3 cut(s)	470, 989, 1282
ScrFI	CCNGG	6 cut(s)	201, 657, 909, 1321, 1470, 1620
SduI	GDGCHC	3 cut(s)	45, 495, 719
SfaNI	GCATC	4 cut(s)	849, 1124, 1787, 2100
SfcI	CTRYAG	1 cut(s)	1491
SinI	GGWCC	3 cut(s)	4, 1829, 2025
SmlI	CTYRAG	3 cut(s)	494, 979, 1138
SmoI	CTYRAG	3 cut(s)	494, 979, 1138
SsiI	CCGC	4 cut(s)	564, 738, 999, 1959
SspMI	CTAG	6 cut(s)	567, 711, 750, 903, 1887, 2112
SstI	GAGCTC	2 cut(s)	45, 495
StyD4I	CCNGG	6 cut(s)	199, 655, 907, 1319, 1468, 1618
StyI	CCWWGG	2 cut(s)	21, 2028
TaaI	ACNGT	4 cut(s)	8, 118, 1745, 1904
TaiI	ACGT	2 cut(s)	317, 2085
TaqI	TCGA	5 cut(s)	311, 464, 943, 1243, 1881
TatI	WGTACW	2 cut(s)	1462, 2063
TfiI	GAWTC	6 cut(s)	137, 794, 1370, 1519, 1559, 1604
Tru1I	TTAA	6 cut(s)	123, 516, 1722, 1854, 2151, 2192
Tru9I	TTAA	6 cut(s)	123, 516, 1722, 1854, 2151, 2192
TscAI	CASTG	5 cut(s)	1045, 1153, 1750, 1909, 2151
TseFI	GTSAC	3 cut(s)	846, 1739, 1898
TseI	GCWGC	5 cut(s)	217, 600, 928, 1576, 1949
Tsp45I	GTSAC	3 cut(s)	846, 1739, 1898
TspGWI	ACGGA	1 cut(s)	439
TspRI	CASTG	5 cut(s)	1045, 1153, 1750, 1909, 2151
Van91I	CCANNNNNTGG	1 cut(s)	164
VpaK11BI	GGWCC	3 cut(s)	4, 1829, 2025
XapI	RAATTY	6 cut(s)	194, 210, 778, 1289, 1567, 1709
XceI	RCATGY	3 cut(s)	1088, 1737, 1896
XmnI	GAANNNNTTC	2 cut(s)	584, 621
XspI	CTAG	6 cut(s)	567, 711, 750, 903, 1887, 2112
ZrmI	AGTACT	1 cut(s)	2065
Zsp2I	ATGCAT	1 cut(s)	1086

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.