MD11G1204700.v1.1
ERF Family

mTERF

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Reverse (-)
29872820 .. 29875607
2788 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1204700.v1.1.491

Sequence Viewer

Length: 1485 bp
ATGGTATCTTTCTCTCTTTCCTCCTCCTCCTCCTCTTCTTCTTGTCTGAAACTCTTCTCTCACTCCCAGTTCACCATTACCACCCTCTCCAATCTCTCTGGCCACAAAAGAAGGTCCGATTCCAGCTGCCGCTTCGTGGTGCTCTCCACCCACTCCAACCCCAAAATTCTAAAGTCCAACCGCCGCTCCCGCTATGGCCAGCCTCTCTCCCCCTACGACCAAGACGACGACGACGAGGTCTCTCGTGTTACTGACGTGTCTGACGACGATTGGTTGCTCAATGATGACTTTGCGGAAATTTCAGACTTTGATGTGAATGGAAAGAGGCCCAAATCCCACAAGGGATTTTCCAACAGTCATTTGGATGGCAGAAACAGCAAGCGCACTCTAGAGAAGAGTGATAAGGAAGACTACTATCATAGACCAAGCAAAACAAAGGAAGTCACTTCCGGGGATGTACCTCGCAAGGGAAAGCTAGCAACAAGGAAAGCTATGGAGGATAGATTCCCTCGGCTGTCAGAAGATGTCGAATTGGATGAGAAGTGGTTACCCCTTATTGATTATCTATGCACATTTGGGCTTAAGGAATCACACTTTATTCAAATGTATGAGAGGCATATGCCTTCTCTTCAAATAAATGTGTGCTCAGCGAAGGAAAGGTTGGAATATTTGTTGAGTGTTGGTGTCAAACAGAGAGATGTAAGAAGAATGATTTTGAGGCAGCCACAGATCCTTGAATATACAGTTGAGAACAATTTGAAGTCCCATGTTGCTTTCCTGATGAATCTGGGTATTCCAAGTTCCAGGGTCGGGCAGATTATTGCTGCTACACCATCCCTGTTCTCCTATAGTGTTGAGAACTCGTTGAAACCAACTGTGAGATACTTAGTTGAAGAGGTCGGGATTAAGGAAAAAGATTTAGGTAAAGTTGTGCAGTTAAGCCCTCAAATTCTGGTTCAGAGGATTGATATATCATGGAATACGCGTTTGCTATTTCTTTCTAAGGAGATAGAAGCACCCAGAGATAGTATAGTGAAGATGGTTAAAAAACATCCGCAGTTCCTCCACTATAGCATTGATGATGGGCTACTGCCCAGGATCAATTTCCTTAGGAGTATTGGGATGTGTAATTCTGACATCTTGAAAGTTTTAACTAGTCTAACGCAGGTACTATCCCTATCACTGGAGGATAATTTAAAGCCGAAGTACAAGTACTTGATAAATGAACTTCATAACGAAGTGCATTCCTTGACCAAATATCCTATGTACCTAAGCTTGTCATTAGACCAGAGAATTCGCCCTCGACATAGATTCTTGGTTTCTCTGAAGAAAGCTCCTAAGGGGCCATTTCCTCTAAGTTCATTGGTCCCAACTGATGAATGCTTCTGTCAACAATGGGCTGGAACTAGCTTAGATAAATATATGGCTTTCCGCCAGAGCTTACTGCTCAAGGAGTTTGCAAAAAAATATGAAAGAAAGGGATAA

Protein Analysis

495

Amino Acids

56.87

Weight (kDa)

9.28

Isoelectric Point (pI)

47.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 186 - 262 1.3e-09 mTERF
mTERF PF02536 249 - 443 4.4e-38 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 236
Acc36I ACCTGC 1 cut(s) 1156
AccBSI CCGCTC 1 cut(s) 186
AccII CGCG 1 cut(s) 985
AciI CCGC 7 cut(s) 130, 181, 184, 190, 293, 1055, 1432
AclWI GGATC 2 cut(s) 724, 1106
AcoI YGGCCR 2 cut(s) 100, 196
AcsI RAATTY 4 cut(s) 165, 297, 948, 1293
AcuI CTGAAG 1 cut(s) 1346
AfaI GTAC 5 cut(s) 459, 1170, 1208, 1214, 1268
AfiI CCNNNNNNNGG 4 cut(s) 136, 467, 810, 1183
AflII CTTAAG 1 cut(s) 581
AflIII ACRYGT 2 cut(s) 255, 983
AgsI TTSAA 7 cut(s) 602, 632, 737, 760, 868, 893, 1144
AhlI ACTAGT 1 cut(s) 1154
AjiI CACGTC 1 cut(s) 256
AjnI CCWGG 2 cut(s) 803, 1094
AjuI GAANNNNNNNTTGG 2 cut(s) 644, 676
AluBI AGCT 7 cut(s) 126, 475, 491, 1275, 1334, 1410, 1440
AluI AGCT 7 cut(s) 126, 475, 491, 1275, 1334, 1410, 1440
Alw21I GWGCWC 2 cut(s) 144, 647
Alw26I GTCTC 1 cut(s) 244
AlwI GGATC 2 cut(s) 724, 1106
AoxI GGCC 4 cut(s) 100, 196, 326, 1343
ApeKI GCWGC 3 cut(s) 126, 721, 824
ApoI RAATTY 4 cut(s) 165, 297, 948, 1293
Asp700I GAANNNNTTC 1 cut(s) 53
AspLEI GCGC 1 cut(s) 384
AspS9I GGNCC 4 cut(s) 114, 327, 1343, 1366
AsuC2I CCSGG 1 cut(s) 451
AsuHPI GGTGA 1 cut(s) 64
AsuNHI GCTAGC 1 cut(s) 475
AvaII GGWCC 2 cut(s) 114, 1366
AxyI CCTNAGG 2 cut(s) 1109, 1338
BalI TGGCCA 2 cut(s) 102, 198
BarI GAAGNNNNNNTAC 2 cut(s) 1196, 1228
BauI CACGAG 1 cut(s) 243
BbsI GAAGAC 1 cut(s) 414
Bbv12I GWGCWC 2 cut(s) 144, 647
BbvI GCAGC 3 cut(s) 113, 733, 811
BccI CCATC 4 cut(s) 359, 841, 1033, 1076
BciT130I CCWGG 2 cut(s) 805, 1096
BcnI CCSGG 1 cut(s) 451
BcoDI GTCTC 1 cut(s) 244
BcuI ACTAGT 1 cut(s) 1154
BfaI CTAG 4 cut(s) 389, 476, 1155, 1407
BfmI CTRYAG 2 cut(s) 847, 1069
BfrI CTTAAG 1 cut(s) 581
BfuAI ACCTGC 1 cut(s) 1156
BisI GCNGC 5 cut(s) 127, 130, 184, 722, 825
BlpI GCTNAGC 1 cut(s) 646
BlsI GCNGC 5 cut(s) 128, 131, 185, 723, 826
BmcAI AGTACT 1 cut(s) 1214
Bme1390I CCNGG 3 cut(s) 451, 805, 1096
Bme18I GGWCC 2 cut(s) 114, 1366
BmgBI CACGTC 1 cut(s) 256
BmgT120I GGNCC 4 cut(s) 114, 327, 1343, 1366
BmiI GGNNCC 2 cut(s) 1344, 1368
BmrFI CCNGG 3 cut(s) 451, 805, 1096
BmrI ACTGGG 1 cut(s) 61
BmtI GCTAGC 1 cut(s) 479
BmuI ACTGGG 1 cut(s) 61
BpiI GAAGAC 1 cut(s) 414
BpmI CTGGAG 1 cut(s) 1205
Bpu10I CCTNAGC 1 cut(s) 1271
Bpu1102I GCTNAGC 1 cut(s) 646
BpuEI CTTGAG 1 cut(s) 1433
BpuMI CCSGG 1 cut(s) 451
BsaI GGTCTC 1 cut(s) 244
BsaJI CCNNGG 4 cut(s) 450, 509, 804, 1094
BsaXI ACNNNNNCTCC 2 cut(s) 170, 200
Bsc4I CCNNNNNNNGG 4 cut(s) 136, 467, 810, 1183
Bse1I ACTGG 2 cut(s) 67, 1188
Bse21I CCTNAGG 2 cut(s) 1109, 1338
BseBI CCWGG 2 cut(s) 805, 1096
BseDI CCNNGG 4 cut(s) 450, 509, 804, 1094
BseGI GGATG 6 cut(s) 370, 460, 541, 833, 1051, 1128
BseLI CCNNNNNNNGG 4 cut(s) 136, 467, 810, 1183
BseMII CTCAG 1 cut(s) 660
BseNI ACTGG 2 cut(s) 67, 1188
BseRI GAGGAG 4 cut(s) 13, 16, 19, 22
BseXI GCAGC 3 cut(s) 113, 733, 811
BsgI GTGCAG 1 cut(s) 953
Bsh1236I CGCG 1 cut(s) 985
BshFI GGCC 4 cut(s) 102, 198, 328, 1345
BsiHKAI GWGCWC 2 cut(s) 144, 647
BsiSI CCGG 1 cut(s) 450
BslFI GGGAC 2 cut(s) 748, 1352
BslI CCNNNNNNNGG 4 cut(s) 136, 467, 810, 1183
BsmAI GTCTC 1 cut(s) 244
BsmFI GGGAC 2 cut(s) 748, 1352
BsmI GAATGC 2 cut(s) 1243, 1385
BsnI GGCC 4 cut(s) 102, 198, 328, 1345
Bso31I GGTCTC 1 cut(s) 244
Bsp1286I GDGCHC 2 cut(s) 144, 647
Bsp143I GATC 2 cut(s) 729, 1098
Bsp1720I GCTNAGC 1 cut(s) 646
BspACI CCGC 7 cut(s) 130, 181, 184, 190, 293, 1055, 1432
BspANI GGCC 4 cut(s) 102, 198, 328, 1345
BspCNI CTCAG 1 cut(s) 659
BspFNI CGCG 1 cut(s) 985
BspLI GGNNCC 2 cut(s) 1344, 1368
BspMI ACCTGC 1 cut(s) 1156
BspOI GCTAGC 1 cut(s) 479
BspPI GGATC 2 cut(s) 724, 1106
BspTI CTTAAG 1 cut(s) 581
BspTNI GGTCTC 1 cut(s) 244
BsrBI CCGCTC 1 cut(s) 186
BsrI ACTGG 2 cut(s) 67, 1188
BssECI CCNNGG 4 cut(s) 450, 509, 804, 1094
BssMI GATC 2 cut(s) 729, 1098
BssSI CACGAG 1 cut(s) 243
Bst2BI CACGAG 1 cut(s) 243
Bst2UI CCWGG 2 cut(s) 805, 1096
Bst4CI ACNGT 3 cut(s) 356, 745, 877
Bst6I CTCTTC 5 cut(s) 40, 59, 389, 633, 888
BstAFI CTTAAG 1 cut(s) 581
BstC8I GCNNGC 3 cut(s) 200, 380, 477
BstDEI CTNAG 8 cut(s) 646, 886, 1002, 1109, 1271, 1338, 1355, 1411
BstEII GGTNACC 1 cut(s) 546
BstF5I GGATG 6 cut(s) 370, 460, 541, 833, 1051, 1128
BstFNI CGCG 1 cut(s) 985
BstHHI GCGC 1 cut(s) 384
BstKTI GATC 2 cut(s) 732, 1101
BstMAI GTCTC 1 cut(s) 244
BstMBI GATC 2 cut(s) 729, 1098
BstMWI GCNNNNNNNGC 2 cut(s) 189, 375
BstNI CCWGG 2 cut(s) 805, 1096
BstPI GGTNACC 1 cut(s) 546
BstSCI CCNGG 3 cut(s) 449, 803, 1094
BstSFI CTRYAG 2 cut(s) 847, 1069
BstUI CGCG 1 cut(s) 985
BstV1I GCAGC 3 cut(s) 113, 733, 811
BstV2I GAAGAC 1 cut(s) 414
BstX2I RGATCY 1 cut(s) 729
BstYI RGATCY 1 cut(s) 729
Bsu36I CCTNAGG 2 cut(s) 1109, 1338
BsuRI GGCC 4 cut(s) 102, 198, 328, 1345
BtrI CACGTC 1 cut(s) 256
BtsCI GGATG 6 cut(s) 370, 460, 541, 833, 1051, 1128
BtsIMutI CAGTG 1 cut(s) 1181
BveI ACCTGC 1 cut(s) 1156
Cac8I GCNNGC 3 cut(s) 200, 380, 477
CfoI GCGC 1 cut(s) 384
Cfr13I GGNCC 4 cut(s) 114, 327, 1343, 1366
Csp6I GTAC 5 cut(s) 458, 1169, 1207, 1213, 1267
CviAII CATG 2 cut(s) 767, 975
CviQI GTAC 5 cut(s) 458, 1169, 1207, 1213, 1267
DdeI CTNAG 8 cut(s) 646, 886, 1002, 1109, 1271, 1338, 1355, 1411
DpnI GATC 2 cut(s) 731, 1100
DpnII GATC 2 cut(s) 729, 1098
DraI TTTAAA 1 cut(s) 1197
DrdI GACNNNNNNGTC 1 cut(s) 236
DseDI GACNNNNNNGTC 1 cut(s) 236
EaeI YGGCCR 2 cut(s) 100, 196
Eam1104I CTCTTC 5 cut(s) 40, 59, 389, 633, 888
EarI CTCTTC 5 cut(s) 40, 59, 389, 633, 888
EciI GGCGGA 1 cut(s) 1421
Eco31I GGTCTC 1 cut(s) 244
Eco47I GGWCC 2 cut(s) 114, 1366
Eco57I CTGAAG 1 cut(s) 1346
Eco81I CCTNAGG 2 cut(s) 1109, 1338
Eco91I GGTNACC 1 cut(s) 546
EcoO65I GGTNACC 1 cut(s) 546
EcoRI GAATTC 1 cut(s) 1293
EcoRII CCWGG 2 cut(s) 803, 1094
FaeI CATG 2 cut(s) 770, 978
FaqI GGGAC 2 cut(s) 748, 1352
FatI CATG 2 cut(s) 766, 974
FauI CCCGC 1 cut(s) 197
FauNDI CATATG 1 cut(s) 618
Fnu4HI GCNGC 5 cut(s) 127, 130, 184, 722, 825
FokI GGATG 6 cut(s) 377, 467, 548, 820, 1038, 1135
Fsp4HI GCNGC 5 cut(s) 127, 130, 184, 722, 825
FspBI CTAG 4 cut(s) 389, 476, 1155, 1407
GlaI GCGC 1 cut(s) 383
GluI GCNGC 5 cut(s) 127, 130, 184, 722, 825
GsuI CTGGAG 1 cut(s) 1205
HaeIII GGCC 4 cut(s) 102, 198, 328, 1345
HapII CCGG 1 cut(s) 450
HhaI GCGC 1 cut(s) 384
Hin1II CATG 2 cut(s) 770, 978
Hin6I GCGC 1 cut(s) 382
HinP1I GCGC 1 cut(s) 382
HincII GTYRAC 1 cut(s) 1391
HindII GTYRAC 1 cut(s) 1391
HindIII AAGCTT 1 cut(s) 1273
HinfI GANTC 5 cut(s) 119, 504, 587, 784, 1311
HpaII CCGG 1 cut(s) 450
HphI GGTGA 1 cut(s) 64
Hpy166II GTNNAC 2 cut(s) 72, 1391
Hpy188I TCNGA 8 cut(s) 48, 118, 262, 304, 520, 960, 1135, 1326
Hpy188III TCNNGA 4 cut(s) 389, 778, 901, 1141
Hpy8I GTNNAC 2 cut(s) 72, 1391
Hpy99I CGWCG 4 cut(s) 230, 233, 236, 269
HpyAV CCTTC 3 cut(s) 105, 633, 646
HpyCH4III ACNGT 3 cut(s) 356, 745, 877
HpyCH4IV ACGT 1 cut(s) 255
HpyCH4V TGCA 4 cut(s) 570, 934, 1243, 1460
HpyF10VI GCNNNNNNNGC 2 cut(s) 189, 375
HpyF3I CTNAG 8 cut(s) 646, 886, 1002, 1109, 1271, 1338, 1355, 1411
HpySE526I ACGT 1 cut(s) 255
Hsp92II CATG 2 cut(s) 770, 978
HspAI GCGC 1 cut(s) 382
Kzo9I GATC 2 cut(s) 729, 1098
LmnI GCTCC 2 cut(s) 191, 1339
Lsp1109I GCAGC 3 cut(s) 113, 733, 811
MaeI CTAG 4 cut(s) 389, 476, 1155, 1407
MaeII ACGT 1 cut(s) 255
MaeIII GTNAC 3 cut(s) 247, 442, 546
MalI GATC 2 cut(s) 731, 1100
MbiI CCGCTC 1 cut(s) 186
MboI GATC 2 cut(s) 729, 1098
MflI RGATCY 1 cut(s) 729
MhlI GDGCHC 2 cut(s) 144, 647
MlsI TGGCCA 2 cut(s) 102, 198
MluCI AATT 9 cut(s) 165, 297, 530, 754, 948, 1102, 1129, 1192, 1293
MluI ACGCGT 1 cut(s) 983
MluNI TGGCCA 2 cut(s) 102, 198
MmeI TCCRAC 4 cut(s) 180, 201, 375, 642
Mox20I TGGCCA 2 cut(s) 102, 198
MroXI GAANNNNTTC 1 cut(s) 53
MscI TGGCCA 2 cut(s) 102, 198
MseI TTAA 6 cut(s) 582, 906, 938, 1044, 1151, 1196
MslI CAYNNNNRTG 1 cut(s) 363
Msp20I TGGCCA 2 cut(s) 102, 198
MspA1I CMGCKG 1 cut(s) 126
MspCI CTTAAG 1 cut(s) 581
MspI CCGG 1 cut(s) 450
MspR9I CCNGG 3 cut(s) 451, 805, 1096
Mva1269I GAATGC 2 cut(s) 1243, 1385
MvaI CCWGG 2 cut(s) 805, 1096
MvnI CGCG 1 cut(s) 985
MwoI GCNNNNNNNGC 2 cut(s) 189, 375
NciI CCSGG 1 cut(s) 451
NdeI CATATG 1 cut(s) 618
NdeII GATC 2 cut(s) 729, 1098
NheI GCTAGC 1 cut(s) 475
NlaIII CATG 2 cut(s) 770, 978
NlaIV GGNNCC 2 cut(s) 1344, 1368
NmeAIII GCCGAG 1 cut(s) 490
NmuCI GTSAC 1 cut(s) 442
PcsI WCGNNNNNNNCGW 3 cut(s) 222, 231, 261
PctI GAATGC 2 cut(s) 1243, 1385
PdmI GAANNNNTTC 1 cut(s) 53
PfeI GAWTC 5 cut(s) 119, 504, 587, 784, 1311
PflFI GACNNNGTC 1 cut(s) 236
PkrI GCNGC 5 cut(s) 128, 131, 185, 723, 826
Psp6I CCWGG 2 cut(s) 803, 1094
PspEI GGTNACC 1 cut(s) 546
PspGI CCWGG 2 cut(s) 803, 1094
PspN4I GGNNCC 2 cut(s) 1344, 1368
PspPI GGNCC 4 cut(s) 114, 327, 1343, 1366
PsrI GAACNNNNNNTAC 2 cut(s) 784, 816
PsuI RGATCY 1 cut(s) 729
PsyI GACNNNGTC 1 cut(s) 236
PvuII CAGCTG 1 cut(s) 126
RsaI GTAC 5 cut(s) 459, 1170, 1208, 1214, 1268
RsaNI GTAC 5 cut(s) 458, 1169, 1207, 1213, 1267
RseI CAYNNNNRTG 1 cut(s) 363
SaqAI TTAA 6 cut(s) 582, 906, 938, 1044, 1151, 1196
SatI GCNGC 5 cut(s) 127, 130, 184, 722, 825
Sau3AI GATC 2 cut(s) 729, 1098
Sau96I GGNCC 4 cut(s) 114, 327, 1343, 1366
ScaI AGTACT 1 cut(s) 1214
ScrFI CCNGG 3 cut(s) 451, 805, 1096
SduI GDGCHC 2 cut(s) 144, 647
SfcI CTRYAG 2 cut(s) 847, 1069
SinI GGWCC 2 cut(s) 114, 1366
SmiMI CAYNNNNRTG 1 cut(s) 363
SmlI CTYRAG 2 cut(s) 581, 1448
SmoI CTYRAG 2 cut(s) 581, 1448
SpeI ACTAGT 1 cut(s) 1154
Sse9I AATT 9 cut(s) 165, 297, 530, 754, 948, 1102, 1129, 1192, 1293
SsiI CCGC 7 cut(s) 130, 181, 184, 190, 293, 1055, 1432
SspI AATATT 1 cut(s) 668
SspMI CTAG 4 cut(s) 389, 476, 1155, 1407
StyD4I CCNGG 3 cut(s) 449, 803, 1094
TaaI ACNGT 3 cut(s) 356, 745, 877
TaiI ACGT 1 cut(s) 258
TaqI TCGA 2 cut(s) 528, 1303
TasI AATT 9 cut(s) 165, 297, 530, 754, 948, 1102, 1129, 1192, 1293
TatI WGTACW 2 cut(s) 1206, 1212
TauI GCSGC 2 cut(s) 132, 186
TfiI GAWTC 5 cut(s) 119, 504, 587, 784, 1311
Tru1I TTAA 6 cut(s) 582, 906, 938, 1044, 1151, 1196
Tru9I TTAA 6 cut(s) 582, 906, 938, 1044, 1151, 1196
TscAI CASTG 1 cut(s) 1188
TseFI GTSAC 1 cut(s) 442
TseI GCWGC 3 cut(s) 126, 721, 824
Tsp45I GTSAC 1 cut(s) 442
TspDTI ATGAA 6 cut(s) 797, 1220, 1239, 1350, 1392, 1485
TspRI CASTG 1 cut(s) 1188
Tth111I GACNNNGTC 1 cut(s) 236
Vha464I CTTAAG 1 cut(s) 581
VpaK11BI GGWCC 2 cut(s) 114, 1366
XapI RAATTY 4 cut(s) 165, 297, 948, 1293
XbaI TCTAGA 1 cut(s) 388
XcmI CCANNNNNNNNNTGG 1 cut(s) 358
XmnI GAANNNNTTC 1 cut(s) 53
XspI CTAG 4 cut(s) 389, 476, 1155, 1407
ZrmI AGTACT 1 cut(s) 1214
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.