pycom03g14160
ERF Family

mTERF

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Reverse (-)
15450810 .. 15453409
2600 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g14160.5

Sequence Viewer

Length: 1563 bp
ATGCTTCAAGCTGATGAGTCTGGTATATTCTTTGTCTCTCTTCCTCTATCTAGTAAAATGGTACCTTTCTCTCTCTGCCCCTCCTCGCATTCCTCCTCCTCCTCTTCTTGTCTGAAACTCGTCTCTCAGTCCCAGTTCATCATTACTACTCTCTCCAATCTCTCTGGTCGCAAAAGGAGGTCCGATTCCAGCTGCCGCTTCGTGGTGCTCTCCACCCACTCCAACCCCAAAATTCTCAAGTCCAACCGCCGGTCCCGCTATGGCCAGCCTCTCTCCCCCTACGACCAAGACGACGACGACCAGGTCTCTCGTGTTACTGACATGTCCGACGACGATTGGTTGCTCAATGATGACTTTTCGAAAATTTCAGATTTTGATGTTAGTAGAAAGAGGCCCAAATCCCACAAGGGGTTTTCCAATGGTCATTTGGATGGCAGAAACAGCAAGCGCACTCTAGAGAAGAGTAATAAGGAAGACTACTATTATAGTCCAAGCAAAAAAGAAGCAGTCACTTCCGTGGATGTTCCTCGCAAGGGAAAGCTAGCAACAAGGAAGGCTATGGAGGATAGATTCCCTCGACTGTCAGAAGAAGTCCAATTGGATGAGAAGTTGTTACCCCTTATTGATTATCTAAGCACATTTGGGCTTAAGGAATCACACTTTATTCAAATGTATGAGAGGCATATGCCTTCTCTTCAAATAAATGTGTGCTCAGCAAAGGAAAGGTTGGAATATTTGTTGAGTGTTGGTGTCAAACAGAGAGATGTAAGAAGAATGATTTTGAGGCAACCATCGATCCTCGAATATACAGTTGAGAACAATTTGAAGTCCCATGTTGCTTTCCTGATGAGTCTGGGTATTCCAAGTTCCAGGGTCGGGCAGATTATTGCTTCTACACCATCCCTCTTCTCCTATAGTGTTGAGAACTCGTTGAAACCAACTGTGAGATACTTAGTTGAAGAGGTTGGGATTAAGGAAAAGGATTTGGGTAAAGTTGTGCAGTTAAGCCCTCAAATTCTGGTTCAGCGGATAGATATATCATGGAATACTCGTCTGCTATTTCTTTCTAAGGAAATAGGAGCAACCAGAGATAGTATAGTGAAGATGGTTAAAAAACATCCGCAGTTCCTCCACTATAGCATTGATGATGGGCTATTGCCCAGGATCAATTTCCTTAGGAGTATCGGGATGTGTAATTCTGACATCTTGAAAGTTTTAACTAGTCTAACACAGGTACTATCCCTATCACTGGAGGATAACTTAAAACCGAAGTACAAGTACTTGATAAATGAACTTCATAACGAAGTGCATTCCTTGACCAAATATCCTATGTACCTAAGCTTGTCATTAGACCAGAGAATTCGCCCTCGACATAGGTTCTTGGTTTCTCTGCAGAAAGCTCCTAAGGGGCCATTTCCTCTAAGTTCATTGGTCCCAACTGATGAATGCTTCTGTCAACAATGGGCTGGAACTAGCTTAGATAAATATTTGGCTTTCCGGCAGAGCTTACTGCTCAAAGAGTGTGCAAAAAATATGAAAGAAAGGGATAACATCCTCCATTAA

Protein Analysis

521

Amino Acids

59.53

Weight (kDa)

9.38

Isoelectric Point (pI)

51.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 302
Acc65I GGTACC 1 cut(s) 61
AccB1I GGYRCC 1 cut(s) 61
AciI CCGC 5 cut(s) 196, 247, 256, 1027, 1121
AclWI GGATC 2 cut(s) 790, 1172
AcoI YGGCCR 1 cut(s) 262
AcsI RAATTY 4 cut(s) 231, 363, 1014, 1359
AfaI GTAC 5 cut(s) 63, 1236, 1274, 1280, 1334
AfiI CCNNNNNNNGG 6 cut(s) 202, 249, 408, 533, 876, 1249
AflII CTTAAG 1 cut(s) 647
AflIII ACRYGT 1 cut(s) 321
AgsI TTSAA 7 cut(s) 8, 668, 698, 826, 934, 959, 1210
AhlI ACTAGT 1 cut(s) 1220
AjnI CCWGG 3 cut(s) 300, 869, 1160
AleI CACNNNNGTG 1 cut(s) 515
AluBI AGCT 7 cut(s) 11, 192, 541, 1341, 1400, 1476, 1506
AluI AGCT 7 cut(s) 11, 192, 541, 1341, 1400, 1476, 1506
Alw21I GWGCWC 2 cut(s) 210, 713
Alw26I GTCTC 3 cut(s) 40, 127, 310
AlwI GGATC 2 cut(s) 790, 1172
AoxI GGCC 3 cut(s) 262, 392, 1409
ApeKI GCWGC 1 cut(s) 192
ApoI RAATTY 4 cut(s) 231, 363, 1014, 1359
Asp718I GGTACC 1 cut(s) 61
AspLEI GCGC 1 cut(s) 450
AspS9I GGNCC 5 cut(s) 180, 252, 393, 1409, 1432
AsuII TTCGAA 1 cut(s) 359
AsuNHI GCTAGC 1 cut(s) 541
AvaII GGWCC 3 cut(s) 180, 252, 1432
AxyI CCTNAGG 2 cut(s) 1175, 1404
BalI TGGCCA 1 cut(s) 264
BanI GGYRCC 1 cut(s) 61
BarI GAAGNNNNNNTAC 2 cut(s) 1262, 1294
BauI CACGAG 1 cut(s) 309
BbsI GAAGAC 1 cut(s) 480
Bbv12I GWGCWC 2 cut(s) 210, 713
BbvI GCAGC 1 cut(s) 179
BccI CCATC 5 cut(s) 425, 799, 907, 1099, 1142
BciT130I CCWGG 3 cut(s) 302, 871, 1162
BcoDI GTCTC 3 cut(s) 40, 127, 310
BcuI ACTAGT 1 cut(s) 1220
BfaI CTAG 5 cut(s) 51, 455, 542, 1221, 1473
BfmI CTRYAG 3 cut(s) 913, 1135, 1391
BfrI CTTAAG 1 cut(s) 647
BisI GCNGC 2 cut(s) 193, 196
BlpI GCTNAGC 1 cut(s) 712
BlsI GCNGC 2 cut(s) 194, 197
BmcAI AGTACT 1 cut(s) 1280
Bme1390I CCNGG 3 cut(s) 302, 871, 1162
Bme18I GGWCC 3 cut(s) 180, 252, 1432
BmgT120I GGNCC 5 cut(s) 180, 252, 393, 1409, 1432
BmiI GGNNCC 4 cut(s) 63, 254, 1410, 1434
BmrFI CCNGG 3 cut(s) 302, 871, 1162
BmrI ACTGGG 1 cut(s) 127
BmtI GCTAGC 1 cut(s) 545
BmuI ACTGGG 1 cut(s) 127
BpiI GAAGAC 1 cut(s) 480
BpmI CTGGAG 1 cut(s) 1271
Bpu10I CCTNAGC 1 cut(s) 1337
Bpu1102I GCTNAGC 1 cut(s) 712
Bpu14I TTCGAA 1 cut(s) 359
BpuEI CTTGAG 1 cut(s) 221
Bsa29I ATCGAT 1 cut(s) 794
BsaI GGTCTC 1 cut(s) 310
BsaJI CCNNGG 3 cut(s) 516, 870, 1160
Bsc4I CCNNNNNNNGG 6 cut(s) 202, 249, 408, 533, 876, 1249
Bse118I RCCGGY 1 cut(s) 249
Bse1I ACTGG 2 cut(s) 133, 1254
Bse21I CCTNAGG 2 cut(s) 1175, 1404
BseBI CCWGG 3 cut(s) 302, 871, 1162
BseCI ATCGAT 1 cut(s) 794
BseDI CCNNGG 3 cut(s) 516, 870, 1160
BseGI GGATG 7 cut(s) 436, 526, 607, 899, 1117, 1194, 1551
BseLI CCNNNNNNNGG 6 cut(s) 202, 249, 408, 533, 876, 1249
BseMII CTCAG 2 cut(s) 140, 726
BseNI ACTGG 2 cut(s) 133, 1254
BseRI GAGGAG 4 cut(s) 73, 85, 88, 91
BseXI GCAGC 1 cut(s) 179
BsgI GTGCAG 1 cut(s) 1019
BshFI GGCC 3 cut(s) 264, 394, 1411
BshNI GGYRCC 1 cut(s) 61
BshVI ATCGAT 1 cut(s) 794
BsiHKAI GWGCWC 2 cut(s) 210, 713
BsiSI CCGG 2 cut(s) 250, 1498
BslFI GGGAC 4 cut(s) 115, 238, 814, 1418
BslI CCNNNNNNNGG 6 cut(s) 202, 249, 408, 533, 876, 1249
BsmAI GTCTC 3 cut(s) 40, 127, 310
BsmBI CGTCTC 1 cut(s) 127
BsmFI GGGAC 4 cut(s) 115, 238, 814, 1418
BsmI GAATGC 3 cut(s) 88, 1309, 1451
BsnI GGCC 3 cut(s) 264, 394, 1411
Bso31I GGTCTC 1 cut(s) 310
Bsp119I TTCGAA 1 cut(s) 359
Bsp1286I GDGCHC 2 cut(s) 210, 713
Bsp143I GATC 2 cut(s) 795, 1164
Bsp1720I GCTNAGC 1 cut(s) 712
BspACI CCGC 5 cut(s) 196, 247, 256, 1027, 1121
BspANI GGCC 3 cut(s) 264, 394, 1411
BspCNI CTCAG 2 cut(s) 139, 725
BspDI ATCGAT 1 cut(s) 794
BspLI GGNNCC 4 cut(s) 63, 254, 1410, 1434
BspMAI CTGCAG 1 cut(s) 1395
BspOI GCTAGC 1 cut(s) 545
BspPI GGATC 2 cut(s) 790, 1172
BspT104I TTCGAA 1 cut(s) 359
BspT107I GGYRCC 1 cut(s) 61
BspTI CTTAAG 1 cut(s) 647
BspTNI GGTCTC 1 cut(s) 310
BsrFI RCCGGY 1 cut(s) 249
BsrI ACTGG 2 cut(s) 133, 1254
BssAI RCCGGY 1 cut(s) 249
BssECI CCNNGG 3 cut(s) 516, 870, 1160
BssMI GATC 2 cut(s) 795, 1164
BssSI CACGAG 1 cut(s) 309
Bst2BI CACGAG 1 cut(s) 309
Bst2UI CCWGG 3 cut(s) 302, 871, 1162
Bst4CI ACNGT 3 cut(s) 582, 811, 943
Bst6I CTCTTC 6 cut(s) 45, 109, 455, 699, 911, 954
BstAFI CTTAAG 1 cut(s) 647
BstBI TTCGAA 1 cut(s) 359
BstC8I GCNNGC 3 cut(s) 266, 446, 543
BstDSI CCRYGG 1 cut(s) 516
BstF5I GGATG 7 cut(s) 436, 526, 607, 899, 1117, 1194, 1551
BstHHI GCGC 1 cut(s) 450
BstKTI GATC 2 cut(s) 798, 1167
BstMAI GTCTC 3 cut(s) 40, 127, 310
BstMBI GATC 2 cut(s) 795, 1164
BstMWI GCNNNNNNNGC 2 cut(s) 255, 441
BstNI CCWGG 3 cut(s) 302, 871, 1162
BstNSI RCATGY 1 cut(s) 325
BstSCI CCNGG 3 cut(s) 300, 869, 1160
BstSFI CTRYAG 3 cut(s) 913, 1135, 1391
BstV1I GCAGC 1 cut(s) 179
BstV2I GAAGAC 1 cut(s) 480
Bsu15I ATCGAT 1 cut(s) 794
Bsu36I CCTNAGG 2 cut(s) 1175, 1404
BsuRI GGCC 3 cut(s) 264, 394, 1411
BsuTUI ATCGAT 1 cut(s) 794
BtgI CCRYGG 1 cut(s) 516
BtsCI GGATG 7 cut(s) 436, 526, 607, 899, 1117, 1194, 1551
BtsIMutI CAGTG 1 cut(s) 1247
Cac8I GCNNGC 3 cut(s) 266, 446, 543
CfoI GCGC 1 cut(s) 450
Cfr10I RCCGGY 1 cut(s) 249
Cfr13I GGNCC 5 cut(s) 180, 252, 393, 1409, 1432
ClaI ATCGAT 1 cut(s) 794
CsiI ACCWGGT 1 cut(s) 300
Csp6I GTAC 5 cut(s) 62, 1235, 1273, 1279, 1333
CviAII CATG 3 cut(s) 322, 833, 1041
CviQI GTAC 5 cut(s) 62, 1235, 1273, 1279, 1333
DpnI GATC 2 cut(s) 797, 1166
DpnII GATC 2 cut(s) 795, 1164
DrdI GACNNNNNNGTC 1 cut(s) 302
DseDI GACNNNNNNGTC 1 cut(s) 302
EaeI YGGCCR 1 cut(s) 262
Eam1104I CTCTTC 6 cut(s) 45, 109, 455, 699, 911, 954
EarI CTCTTC 6 cut(s) 45, 109, 455, 699, 911, 954
Eco31I GGTCTC 1 cut(s) 310
Eco47I GGWCC 3 cut(s) 180, 252, 1432
Eco81I CCTNAGG 2 cut(s) 1175, 1404
EcoRI GAATTC 1 cut(s) 1359
EcoRII CCWGG 3 cut(s) 300, 869, 1160
Esp3I CGTCTC 1 cut(s) 127
FaeI CATG 3 cut(s) 325, 836, 1044
FaqI GGGAC 4 cut(s) 115, 238, 814, 1418
FatI CATG 3 cut(s) 321, 832, 1040
FauI CCCGC 1 cut(s) 263
FauNDI CATATG 1 cut(s) 684
Fnu4HI GCNGC 2 cut(s) 193, 196
FokI GGATG 7 cut(s) 443, 533, 614, 886, 1104, 1201, 1538
Fsp4HI GCNGC 2 cut(s) 193, 196
FspBI CTAG 5 cut(s) 51, 455, 542, 1221, 1473
GlaI GCGC 1 cut(s) 449
GluI GCNGC 2 cut(s) 193, 196
GsuI CTGGAG 1 cut(s) 1271
HaeIII GGCC 3 cut(s) 264, 394, 1411
HapII CCGG 2 cut(s) 250, 1498
HhaI GCGC 1 cut(s) 450
Hin1II CATG 3 cut(s) 325, 836, 1044
Hin6I GCGC 1 cut(s) 448
HinP1I GCGC 1 cut(s) 448
HincII GTYRAC 1 cut(s) 1457
HindII GTYRAC 1 cut(s) 1457
HindIII AAGCTT 1 cut(s) 1339
HinfI GANTC 5 cut(s) 17, 185, 570, 653, 850
HpaII CCGG 2 cut(s) 250, 1498
Hpy166II GTNNAC 1 cut(s) 1457
Hpy188I TCNGA 6 cut(s) 114, 184, 328, 370, 586, 1201
Hpy188III TCNNGA 4 cut(s) 455, 844, 1186, 1207
Hpy8I GTNNAC 1 cut(s) 1457
Hpy99I CGWCG 4 cut(s) 296, 299, 332, 335
HpyAV CCTTC 2 cut(s) 547, 699
HpyCH4III ACNGT 3 cut(s) 582, 811, 943
HpyCH4V TGCA 4 cut(s) 1000, 1309, 1393, 1526
HpyF10VI GCNNNNNNNGC 2 cut(s) 255, 441
Hsp92II CATG 3 cut(s) 325, 836, 1044
HspAI GCGC 1 cut(s) 448
KpnI GGTACC 1 cut(s) 65
Kzo9I GATC 2 cut(s) 795, 1164
LmnI GCTCC 2 cut(s) 1079, 1405
Lsp1109I GCAGC 1 cut(s) 179
MabI ACCWGGT 1 cut(s) 300
MaeI CTAG 5 cut(s) 51, 455, 542, 1221, 1473
MaeIII GTNAC 3 cut(s) 313, 508, 612
MalI GATC 2 cut(s) 797, 1166
MboI GATC 2 cut(s) 795, 1164
MfeI CAATTG 1 cut(s) 596
MhlI GDGCHC 2 cut(s) 210, 713
MlsI TGGCCA 1 cut(s) 264
MluCI AATT 8 cut(s) 231, 363, 596, 820, 1014, 1168, 1195, 1359
MluNI TGGCCA 1 cut(s) 264
MlyI GAGTC 2 cut(s) 26, 859
MmeI TCCRAC 4 cut(s) 246, 267, 351, 708
Mox20I TGGCCA 1 cut(s) 264
MscI TGGCCA 1 cut(s) 264
MseI TTAA 7 cut(s) 648, 972, 1004, 1110, 1217, 1262, 1561
MslI CAYNNNNRTG 2 cut(s) 429, 515
Msp20I TGGCCA 1 cut(s) 264
MspA1I CMGCKG 2 cut(s) 192, 1027
MspCI CTTAAG 1 cut(s) 647
MspI CCGG 2 cut(s) 250, 1498
MspR9I CCNGG 3 cut(s) 302, 871, 1162
MunI CAATTG 1 cut(s) 596
Mva1269I GAATGC 3 cut(s) 88, 1309, 1451
MvaI CCWGG 3 cut(s) 302, 871, 1162
MwoI GCNNNNNNNGC 2 cut(s) 255, 441
NdeI CATATG 1 cut(s) 684
NdeII GATC 2 cut(s) 795, 1164
NheI GCTAGC 1 cut(s) 541
NlaIII CATG 3 cut(s) 325, 836, 1044
NlaIV GGNNCC 4 cut(s) 63, 254, 1410, 1434
NmuCI GTSAC 1 cut(s) 508
NspI RCATGY 1 cut(s) 325
NspV TTCGAA 1 cut(s) 359
OliI CACNNNNGTG 1 cut(s) 515
PciI ACATGT 1 cut(s) 321
PcsI WCGNNNNNNNCGW 1 cut(s) 288
PctI GAATGC 3 cut(s) 88, 1309, 1451
PfeI GAWTC 3 cut(s) 185, 570, 653
PflFI GACNNNGTC 1 cut(s) 302
PkrI GCNGC 2 cut(s) 194, 197
PleI GAGTC 2 cut(s) 25, 858
PpsI GAGTC 2 cut(s) 25, 858
PscI ACATGT 1 cut(s) 321
Psp6I CCWGG 3 cut(s) 300, 869, 1160
PspGI CCWGG 3 cut(s) 300, 869, 1160
PspN4I GGNNCC 4 cut(s) 63, 254, 1410, 1434
PspPI GGNCC 5 cut(s) 180, 252, 393, 1409, 1432
PsrI GAACNNNNNNTAC 2 cut(s) 850, 882
PstI CTGCAG 1 cut(s) 1395
PsyI GACNNNGTC 1 cut(s) 302
PvuII CAGCTG 1 cut(s) 192
RsaI GTAC 5 cut(s) 63, 1236, 1274, 1280, 1334
RsaNI GTAC 5 cut(s) 62, 1235, 1273, 1279, 1333
RseI CAYNNNNRTG 2 cut(s) 429, 515
SaqAI TTAA 7 cut(s) 648, 972, 1004, 1110, 1217, 1262, 1561
SatI GCNGC 2 cut(s) 193, 196
Sau3AI GATC 2 cut(s) 795, 1164
Sau96I GGNCC 5 cut(s) 180, 252, 393, 1409, 1432
ScaI AGTACT 1 cut(s) 1280
SchI GAGTC 2 cut(s) 26, 859
ScrFI CCNGG 3 cut(s) 302, 871, 1162
SduI GDGCHC 2 cut(s) 210, 713
SexAI ACCWGGT 1 cut(s) 300
SfcI CTRYAG 3 cut(s) 913, 1135, 1391
SfuI TTCGAA 1 cut(s) 359
SinI GGWCC 3 cut(s) 180, 252, 1432
SmiMI CAYNNNNRTG 2 cut(s) 429, 515
SmlI CTYRAG 2 cut(s) 236, 647
SmoI CTYRAG 2 cut(s) 236, 647
SpeI ACTAGT 1 cut(s) 1220
Sse9I AATT 8 cut(s) 231, 363, 596, 820, 1014, 1168, 1195, 1359
SsiI CCGC 5 cut(s) 196, 247, 256, 1027, 1121
SspI AATATT 2 cut(s) 734, 1487
SspMI CTAG 5 cut(s) 51, 455, 542, 1221, 1473
StyD4I CCNGG 3 cut(s) 300, 869, 1160
TaaI ACNGT 3 cut(s) 582, 811, 943
TaqI TCGA 5 cut(s) 359, 577, 794, 801, 1369
TasI AATT 8 cut(s) 231, 363, 596, 820, 1014, 1168, 1195, 1359
TatI WGTACW 2 cut(s) 1272, 1278
TauI GCSGC 1 cut(s) 198
TfiI GAWTC 3 cut(s) 185, 570, 653
Tru1I TTAA 7 cut(s) 648, 972, 1004, 1110, 1217, 1262, 1561
Tru9I TTAA 7 cut(s) 648, 972, 1004, 1110, 1217, 1262, 1561
TscAI CASTG 1 cut(s) 1254
TseFI GTSAC 1 cut(s) 508
TseI GCWGC 1 cut(s) 192
Tsp45I GTSAC 1 cut(s) 508
TspDTI ATGAA 6 cut(s) 127, 1286, 1305, 1416, 1458, 1550
TspGWI ACGGA 1 cut(s) 505
TspRI CASTG 1 cut(s) 1254
Tth111I GACNNNGTC 1 cut(s) 302
Vha464I CTTAAG 1 cut(s) 647
VpaK11BI GGWCC 3 cut(s) 180, 252, 1432
XapI RAATTY 4 cut(s) 231, 363, 1014, 1359
XbaI TCTAGA 1 cut(s) 454
XceI RCATGY 1 cut(s) 325
XcmI CCANNNNNNNNNTGG 1 cut(s) 424
XspI CTAG 5 cut(s) 51, 455, 542, 1221, 1473
ZrmI AGTACT 1 cut(s) 1280
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.