MD11G1246800.v1.1

Metallothionein-like protein type 3-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Forward (+)
35883698 .. 35885211
1514 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1246800.v1.1.491

Sequence Viewer

Length: 201 bp
ATGTCGGGCAAGTGCGGCAACTGCGATTGTGCTGACAGCTCCCAGTGCGTGAAGAAGGGAAACGGCTACGACTTGGTGATCGTGGAGACTGAGAACCGCTCCATGGACACCGTCGTCGTGGACGCTCCTGCAGCCGAGAACGACGGAAAGTGCAAGTGTGGCACAACCTGCCCATGTGTGAACTGCACCTGTGGTCAGTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

67

Amino Acids

6.83

Weight (kDa)

4.52

Isoelectric Point (pI)

30.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016672)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G15353 AT3G15353
fragaria_vesca FvH4_3g20030
malus_domestica MD03G1227300.v1.1 MD03G1227500.v1.1 MD11G1246800.v1.1
prunus_persica Prupe.4G181500_v2.0.a1 Prupe.4G181500_v2.0.a1
pyrus_communis pycom03g17510
rosa_chinensis RchiOBHm_Chr5g0033741
rosa_roxburghii Rroxscaffold_1G00046400
rosa_rugosa Rorug05G0141700
rosa_samantha Rh5BG233600
rosa_wichuraiana Rw5G021580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 113
Acc36I ACCTGC 1 cut(s) 176
AccBSI CCGCTC 1 cut(s) 99
AciI CCGC 2 cut(s) 15, 97
AfiI CCNNNNNNNGG 1 cut(s) 103
AluBI AGCT 1 cut(s) 39
AluI AGCT 1 cut(s) 39
Alw26I GTCTC 1 cut(s) 80
ApeKI GCWGC 1 cut(s) 131
AsuHPI GGTGA 1 cut(s) 88
BbvI GCAGC 1 cut(s) 143
BceAI ACGGC 1 cut(s) 79
BcoDI GTCTC 1 cut(s) 80
BfmI CTRYAG 1 cut(s) 129
BfuAI ACCTGC 1 cut(s) 176
BisI GCNGC 2 cut(s) 16, 132
BlsI GCNGC 2 cut(s) 17, 133
BmrI ACTGGG 1 cut(s) 37
BmuI ACTGGG 1 cut(s) 37
BplI GAGNNNNNCTC 2 cut(s) 83, 115
BsaJI CCNNGG 1 cut(s) 102
Bsc4I CCNNNNNNNGG 1 cut(s) 103
Bse1I ACTGG 1 cut(s) 43
BseDI CCNNGG 1 cut(s) 102
BseLI CCNNNNNNNGG 1 cut(s) 103
BseMII CTCAG 1 cut(s) 81
BseNI ACTGG 1 cut(s) 43
BseXI GCAGC 1 cut(s) 143
BsgI GTGCAG 1 cut(s) 169
BslI CCNNNNNNNGG 1 cut(s) 103
BsmAI GTCTC 1 cut(s) 80
Bsp143I GATC 1 cut(s) 78
Bsp19I CCATGG 1 cut(s) 102
BspACI CCGC 2 cut(s) 15, 97
BspCNI CTCAG 1 cut(s) 82
BspMAI CTGCAG 1 cut(s) 133
BspMI ACCTGC 1 cut(s) 176
BsrBI CCGCTC 1 cut(s) 99
BsrI ACTGG 1 cut(s) 43
BssECI CCNNGG 1 cut(s) 102
BssMI GATC 1 cut(s) 78
BssT1I CCWWGG 1 cut(s) 102
Bst4CI ACNGT 1 cut(s) 112
BstAPI GCANNNNNTGC 1 cut(s) 168
BstDEI CTNAG 1 cut(s) 90
BstDSI CCRYGG 1 cut(s) 102
BstKTI GATC 1 cut(s) 81
BstMAI GTCTC 1 cut(s) 80
BstMBI GATC 1 cut(s) 78
BstMWI GCNNNNNNNGC 6 cut(s) 15, 21, 45, 131, 159, 168
BstSFI CTRYAG 1 cut(s) 129
BstV1I GCAGC 1 cut(s) 143
BtgI CCRYGG 1 cut(s) 102
BtsIMutI CAGTG 1 cut(s) 50
BveI ACCTGC 1 cut(s) 176
CseI GACGC 1 cut(s) 131
CviAII CATG 2 cut(s) 103, 174
CviJI RGCY 3 cut(s) 39, 66, 134
CviKI_1 RGCY 3 cut(s) 39, 66, 134
DdeI CTNAG 1 cut(s) 90
DpnI GATC 1 cut(s) 80
DpnII GATC 1 cut(s) 78
DrdI GACNNNNNNGTC 1 cut(s) 113
DseDI GACNNNNNNGTC 1 cut(s) 113
Eco130I CCWWGG 1 cut(s) 102
EcoT14I CCWWGG 1 cut(s) 102
ErhI CCWWGG 1 cut(s) 102
FaeI CATG 2 cut(s) 106, 177
FaiI YATR 2 cut(s) 104, 175
FatI CATG 2 cut(s) 102, 173
Fnu4HI GCNGC 2 cut(s) 16, 132
Fsp4HI GCNGC 2 cut(s) 16, 132
GluI GCNGC 2 cut(s) 16, 132
HgaI GACGC 1 cut(s) 131
Hin1II CATG 2 cut(s) 106, 177
HphI GGTGA 1 cut(s) 88
Hpy166II GTNNAC 2 cut(s) 121, 181
Hpy8I GTNNAC 2 cut(s) 121, 181
Hpy99I CGWCG 3 cut(s) 116, 119, 146
HpyAV CCTTC 1 cut(s) 49
HpyCH4III ACNGT 1 cut(s) 112
HpyCH4V TGCA 3 cut(s) 131, 153, 186
HpyF10VI GCNNNNNNNGC 6 cut(s) 15, 21, 45, 131, 159, 168
HpyF3I CTNAG 1 cut(s) 90
Hsp92II CATG 2 cut(s) 106, 177
Kzo9I GATC 1 cut(s) 78
LmnI GCTCC 3 cut(s) 44, 104, 130
LpnPI CCDG 3 cut(s) 56, 141, 181
Lsp1109I GCAGC 1 cut(s) 143
MalI GATC 1 cut(s) 80
MbiI CCGCTC 1 cut(s) 99
MboI GATC 1 cut(s) 78
MboII GAAGA 1 cut(s) 64
MwoI GCNNNNNNNGC 6 cut(s) 15, 21, 45, 131, 159, 168
NcoI CCATGG 1 cut(s) 102
NdeII GATC 1 cut(s) 78
NlaIII CATG 2 cut(s) 106, 177
NmeAIII GCCGAG 1 cut(s) 160
PflFI GACNNNGTC 1 cut(s) 110
PkrI GCNGC 2 cut(s) 17, 133
PstI CTGCAG 1 cut(s) 133
PsyI GACNNNGTC 1 cut(s) 110
SatI GCNGC 2 cut(s) 16, 132
Sau3AI GATC 1 cut(s) 78
SetI ASST 3 cut(s) 41, 170, 191
SfcI CTRYAG 1 cut(s) 129
SsiI CCGC 2 cut(s) 15, 97
StyI CCWWGG 1 cut(s) 102
TaaI ACNGT 1 cut(s) 112
TauI GCSGC 1 cut(s) 18
TscAI CASTG 1 cut(s) 50
TseI GCWGC 1 cut(s) 131
TspGWI ACGGA 1 cut(s) 159
TspRI CASTG 1 cut(s) 50
Tth111I GACNNNGTC 1 cut(s) 110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.