Prupe.4G181500_v2.0.a1

metallothionein-like protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
10766955 .. 10769427
2473 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G181500.1

Sequence Viewer

Length: 201 bp
ATGTCGAGCAAGTGTAGCGACTGTAACTGCACTGACAGCAGCCAGTGCACGAAGAAGGGAAGCAGCTACGACTTGGTCATAGTTGAGACTGAGAACCGCTCCATGGACACTGTGATCATGGATGCCCCAGCAGCTGAGAACGATGGAAAGTGCAAGTGCGCCCCAAGCTGCTCCTGTGTGGACTGCAAATGTGGTAATTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

67

Amino Acids

6.97

Weight (kDa)

4.57

Isoelectric Point (pI)

63.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016672)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G15353 AT3G15353
fragaria_vesca FvH4_3g20030
malus_domestica MD03G1227300.v1.1 MD03G1227500.v1.1 MD11G1246800.v1.1
prunus_persica Prupe.4G181500_v2.0.a1 Prupe.4G181500_v2.0.a1
pyrus_communis pycom03g17510
rosa_chinensis RchiOBHm_Chr5g0033741
rosa_roxburghii Rroxscaffold_1G00046400
rosa_rugosa Rorug05G0141700
rosa_samantha Rh5BG233600
rosa_wichuraiana Rw5G021580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 99
AciI CCGC 1 cut(s) 97
AfiI CCNNNNNNNGG 1 cut(s) 103
AluBI AGCT 3 cut(s) 66, 134, 168
AluI AGCT 3 cut(s) 66, 134, 168
Alw21I GWGCWC 1 cut(s) 50
Alw26I GTCTC 1 cut(s) 80
Alw44I GTGCAC 1 cut(s) 46
AlwNI CAGNNNCTG 1 cut(s) 134
ApaLI GTGCAC 1 cut(s) 46
ApeKI GCWGC 4 cut(s) 39, 63, 131, 168
AspLEI GCGC 1 cut(s) 161
BaeGI GKGCMC 1 cut(s) 50
Bbv12I GWGCWC 1 cut(s) 50
BbvI GCAGC 4 cut(s) 51, 75, 143, 155
BccI CCATC 1 cut(s) 137
BclI TGATCA 1 cut(s) 114
BcoDI GTCTC 1 cut(s) 80
BisI GCNGC 4 cut(s) 40, 64, 132, 169
BlsI GCNGC 4 cut(s) 41, 65, 133, 170
BmsI GCATC 1 cut(s) 112
BplI GAGNNNNNCTC 2 cut(s) 83, 115
BsaJI CCNNGG 1 cut(s) 102
Bsc4I CCNNNNNNNGG 1 cut(s) 103
Bse1I ACTGG 1 cut(s) 43
BseDI CCNNGG 1 cut(s) 102
BseGI GGATG 1 cut(s) 127
BseLI CCNNNNNNNGG 1 cut(s) 103
BseMII CTCAG 2 cut(s) 81, 126
BseNI ACTGG 1 cut(s) 43
BseSI GKGCMC 1 cut(s) 50
BseXI GCAGC 4 cut(s) 51, 75, 143, 155
BseYI CCCAGC 1 cut(s) 127
BsgI GTGCAG 1 cut(s) 13
BsiHKAI GWGCWC 1 cut(s) 50
BslI CCNNNNNNNGG 1 cut(s) 103
BsmAI GTCTC 1 cut(s) 80
Bsp1286I GDGCHC 1 cut(s) 50
Bsp143I GATC 1 cut(s) 114
Bsp19I CCATGG 1 cut(s) 102
BspACI CCGC 1 cut(s) 97
BspCNI CTCAG 2 cut(s) 82, 127
BsrBI CCGCTC 1 cut(s) 99
BsrI ACTGG 1 cut(s) 43
BssECI CCNNGG 1 cut(s) 102
BssMI GATC 1 cut(s) 114
BssT1I CCWWGG 1 cut(s) 102
Bst4CI ACNGT 2 cut(s) 23, 112
BstAPI GCANNNNNTGC 1 cut(s) 45
BstDEI CTNAG 2 cut(s) 90, 135
BstDSI CCRYGG 1 cut(s) 102
BstF5I GGATG 1 cut(s) 127
BstHHI GCGC 1 cut(s) 161
BstKTI GATC 1 cut(s) 117
BstMAI GTCTC 1 cut(s) 80
BstMBI GATC 1 cut(s) 114
BstMWI GCNNNNNNNGC 5 cut(s) 15, 36, 45, 131, 165
BstSLI GKGCMC 1 cut(s) 50
BstV1I GCAGC 4 cut(s) 51, 75, 143, 155
BtgI CCRYGG 1 cut(s) 102
BtsCI GGATG 1 cut(s) 127
BtsIMutI CAGTG 3 cut(s) 30, 50, 108
CaiI CAGNNNCTG 1 cut(s) 134
CfoI GCGC 1 cut(s) 161
CviAII CATG 2 cut(s) 103, 118
CviJI RGCY 4 cut(s) 42, 66, 134, 168
CviKI_1 RGCY 4 cut(s) 42, 66, 134, 168
DdeI CTNAG 2 cut(s) 90, 135
DpnI GATC 1 cut(s) 116
DpnII GATC 1 cut(s) 114
Eco130I CCWWGG 1 cut(s) 102
EcoT14I CCWWGG 1 cut(s) 102
ErhI CCWWGG 1 cut(s) 102
FaeI CATG 2 cut(s) 106, 121
FaiI YATR 3 cut(s) 80, 104, 119
FatI CATG 2 cut(s) 102, 117
FbaI TGATCA 1 cut(s) 114
Fnu4HI GCNGC 4 cut(s) 40, 64, 132, 169
FokI GGATG 1 cut(s) 134
Fsp4HI GCNGC 4 cut(s) 40, 64, 132, 169
GlaI GCGC 1 cut(s) 160
GluI GCNGC 4 cut(s) 40, 64, 132, 169
GsaI CCCAGC 1 cut(s) 131
HhaI GCGC 1 cut(s) 161
Hin1II CATG 2 cut(s) 106, 121
Hin6I GCGC 1 cut(s) 159
HinP1I GCGC 1 cut(s) 159
Hpy166II GTNNAC 2 cut(s) 48, 181
Hpy8I GTNNAC 2 cut(s) 48, 181
HpyAV CCTTC 1 cut(s) 49
HpyCH4III ACNGT 2 cut(s) 23, 112
HpyCH4V TGCA 4 cut(s) 30, 48, 153, 186
HpyF10VI GCNNNNNNNGC 5 cut(s) 15, 36, 45, 131, 165
HpyF3I CTNAG 2 cut(s) 90, 135
Hsp92II CATG 2 cut(s) 106, 121
HspAI GCGC 1 cut(s) 159
Ksp22I TGATCA 1 cut(s) 114
Kzo9I GATC 1 cut(s) 114
LmnI GCTCC 2 cut(s) 104, 176
LpnPI CCDG 3 cut(s) 56, 141, 187
Lsp1109I GCAGC 4 cut(s) 51, 75, 143, 155
LweI GCATC 1 cut(s) 112
MaeIII GTNAC 1 cut(s) 23
MalI GATC 1 cut(s) 116
MbiI CCGCTC 1 cut(s) 99
MboI GATC 1 cut(s) 114
MboII GAAGA 1 cut(s) 64
MhlI GDGCHC 1 cut(s) 50
MluCI AATT 1 cut(s) 196
MseI TTAA 1 cut(s) 199
MspA1I CMGCKG 1 cut(s) 134
MwoI GCNNNNNNNGC 5 cut(s) 15, 36, 45, 131, 165
NcoI CCATGG 1 cut(s) 102
NdeII GATC 1 cut(s) 114
NlaIII CATG 2 cut(s) 106, 121
PflFI GACNNNGTC 1 cut(s) 74
PkrI GCNGC 4 cut(s) 41, 65, 133, 170
PspFI CCCAGC 1 cut(s) 127
PstNI CAGNNNCTG 1 cut(s) 134
PsyI GACNNNGTC 1 cut(s) 74
PvuII CAGCTG 1 cut(s) 134
SaqAI TTAA 1 cut(s) 199
SatI GCNGC 4 cut(s) 40, 64, 132, 169
Sau3AI GATC 1 cut(s) 114
SduI GDGCHC 1 cut(s) 50
SetI ASST 3 cut(s) 68, 136, 170
SfaNI GCATC 1 cut(s) 112
Sse9I AATT 1 cut(s) 196
SsiI CCGC 1 cut(s) 97
StyI CCWWGG 1 cut(s) 102
TaaI ACNGT 2 cut(s) 23, 112
TaqI TCGA 1 cut(s) 5
TasI AATT 1 cut(s) 196
Tru1I TTAA 1 cut(s) 199
Tru9I TTAA 1 cut(s) 199
TscAI CASTG 3 cut(s) 37, 50, 115
TseI GCWGC 4 cut(s) 39, 63, 131, 168
TspRI CASTG 3 cut(s) 37, 50, 115
Tth111I GACNNNGTC 1 cut(s) 74
VneI GTGCAC 1 cut(s) 46
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.