Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0010945

Physical Location & Seq

Genomic Coordinates Reverse (-)

37369129 .. 37372512

Gene Structure 3384 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1259400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1020 bp

ATGAGGCCTTCAATCTCCATCGCCAGATCCGTACACCGAGTCGCTCGCCGGAGCTACTCCTCCGCCTCCGTCCCCGAGCGGAAGGTCGCCGTCCTCGGCGCCGCCGGCGGCATCGGCCAGCCCCTCGCCCTCCTCATGAAGCTCAACCCTCTCGTCTCCCACCTCTCCCTCTACGATATCGCCGGAACCCCCGGCGTCGCCGCTGACGTCAGCCACATCAACACCAGATCTGAGGTCAAGGGTTATGCCGGCGAAGAGCAGCTTGCACAAGCCTTGGAGGGAGCCGACGTCGTAATTATCCCCGCCGGTGTGCCCCGAAAGCCCGGGATGACCCGAGACGATCTCTTTAACATTAATGCCGGTATCGTCAAGGGTCTCACTACCGCCATCGCTAAGTACTGCCCCAATGCACTGATCAACATGATTAGCAACCCAGTCAACTCTACGGTCCCGATTGCGGCCGAGGTGTTGAAGAAGGCCGGGAAGTACGACGAGAAGAGGTTGTTTGGTGTCACTACTCTTGATGTGGTCAGGGCTAAGACTTTCTATGCTGGAAAGGCCAATGCTAATGTTGCTGAGGTTAATATACCAGTTGTTGGTGGCCATGCTGGCATCACCATTCTGCCGCTTTTTTCTCAGGCTACCCCGACAGCCAATTTGCCTCATGATGTTATCAAGGCTTTGACAAAGAGAACACAAGATGGAGGAACGGAAGTTGTGGAAGCAAAGGCTGGAAAGGGATCTGCAACATTGTCAATGGCCTATGCTGGCGCTATTTTCGCTGATGCTTGTCTTAAGGGACTTAATGGAGTGCCCGATGTTGTGGAATGTTCGTTTGTGCAATCAAGCATCACTGAACTTCCTTTCTTTGCTTCTAAGGTGAGGCTTGGAAAGAATGGAGTCGAGGAAGTTTTGGGGTTGGGTAATCTCTCGGACTTTGAACAGGAAGGACTGCAAAGCTTGATCCCTGAGCTCAAATCATCCATCGAGAAGGGTATCAAGTTTGCCAACCAGAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006950 GO:0006952 GO:0006970 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009651 GO:0010035 GO:0010038 GO:0016020 GO:0016491 GO:0016614 GO:0016615 GO:0016616 GO:0030060 GO:0030312 GO:0042221 GO:0042742 GO:0043167 GO:0043169 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0046872 GO:0046914 GO:0048046 GO:0050896 GO:0051704 GO:0051707 GO:0055114 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

ko00020 ko00270 ko00620 ko00630 ko00710 ko01100 ko01110 ko01120 ko01130 ko01200 map00020 map00270 map00620 map00630 map00710 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

Ldh_1_C Ldh_1_N

Protein Analysis

340

Amino Acids

35.47

Weight (kDa)

8.98

Isoelectric Point (pI)

43.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ldh_1_N	PF00056	28 - 170	7.9e-49	lactate/malate dehydrogenase, NAD binding domain
Ldh_1_C	PF02866	172 - 335	2.1e-47	lactate/malate dehydrogenase, alpha/beta C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010945)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53240 AT3G15020 AT3G15020
fragaria_vesca	FvH4_3g18670
malus_domestica	MD03G1240100.v1.1 MD11G1259400.v1.1
prunus_persica	Prupe.4G058400_v2.0.a1 Prupe.4G170500_v2.0.a1
pyrus_communis	pycom03g18530 pycom11g22920
rosa_chinensis	RchiOBHm_Chr5g0031491
rosa_laevigata	RLG00000033315
rosa_multiflora	Rmu_sc0006344.1_g000010
rosa_roxburghii	Rroxscaffold_1G00048830
rosa_rugosa	Rorug05G0126300
rosa_samantha	Rh5AG219200 Rh5BG218600 Rh5CG242200 Rh5DG224100
rosa_wichuraiana	Rw5G019990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	210, 291
AccB1I	GGYRCC	1 cut(s)	98
AccB7I	CCANNNNNTGG	1 cut(s)	596
AccBSI	CCGCTC	1 cut(s)	79
AciI	CCGC	9 cut(s)	63, 79, 102, 108, 201, 303, 384, 458, 626
AclWI	GGATC	3 cut(s)	21, 748, 958
AcoI	YGGCCR	3 cut(s)	115, 459, 601
AcyI	GRCGYC	4 cut(s)	99, 195, 207, 288
AfaI	GTAC	3 cut(s)	33, 398, 488
AfiI	CCNNNNNNNGG	2 cut(s)	457, 596
AflII	CTTAAG	1 cut(s)	794
AgsI	TTSAA	3 cut(s)	12, 472, 941
AluBI	AGCT	5 cut(s)	54, 142, 262, 960, 973
AluI	AGCT	5 cut(s)	54, 142, 262, 960, 973
Alw21I	GWGCWC	1 cut(s)	975
Alw26I	GTCTC	3 cut(s)	160, 330, 380
AlwI	GGATC	3 cut(s)	21, 748, 958
Ama87I	CYCGRG	3 cut(s)	74, 323, 333
AoxI	GGCC	7 cut(s)	5, 115, 459, 477, 558, 601, 759
ApeKI	GCWGC	1 cut(s)	259
ArsI	GACNNNNNNTTYG	2 cut(s)	640, 672
AseI	ATTAAT	1 cut(s)	354
AspLEI	GCGC	2 cut(s)	101, 773
AspS9I	GGNCC	1 cut(s)	448
AsuC2I	CCSGG	4 cut(s)	192, 324, 325, 481
AsuHPI	GGTGA	2 cut(s)	607, 892
AvaI	CYCGRG	3 cut(s)	74, 323, 333
AvaII	GGWCC	1 cut(s)	448
BaeGI	GKGCMC	2 cut(s)	315, 816
BalI	TGGCCA	1 cut(s)	603
BanI	GGYRCC	1 cut(s)	98
BanII	GRGCYC	1 cut(s)	975
Bbv12I	GWGCWC	1 cut(s)	975
BbvCI	CCTCAGC	1 cut(s)	576
BbvI	GCAGC	1 cut(s)	271
BccI	CCATC	4 cut(s)	26, 395, 695, 992
BceAI	ACGGC	1 cut(s)	74
BclI	TGATCA	1 cut(s)	414
BcnI	CCSGG	4 cut(s)	192, 324, 325, 481
BcoDI	GTCTC	3 cut(s)	160, 330, 380
BfoI	RGCGCY	2 cut(s)	102, 774
BfrI	CTTAAG	1 cut(s)	794
BglI	GCCNNNNNGGC	1 cut(s)	609
BglII	AGATCT	1 cut(s)	227
BisI	GCNGC	6 cut(s)	102, 109, 201, 260, 459, 626
BlsI	GCNGC	6 cut(s)	103, 110, 202, 261, 460, 627
BmcAI	AGTACT	1 cut(s)	398
Bme1390I	CCNGG	4 cut(s)	192, 324, 325, 481
Bme18I	GGWCC	1 cut(s)	448
BmeT110I	CYCGRG	3 cut(s)	74, 323, 333
BmgT120I	GGNCC	1 cut(s)	448
BmiI	GGNNCC	4 cut(s)	100, 187, 283, 450
BmrFI	CCNGG	4 cut(s)	192, 324, 325, 481
BmrI	ACTGGG	1 cut(s)	428
BmsI	GCATC	4 cut(s)	120, 621, 775, 858
BmuI	ACTGGG	1 cut(s)	428
BplI	GAGNNNNNCTC	2 cut(s)	327, 359
Bpu10I	CCTNAGC	2 cut(s)	576, 969
BpuMI	CCSGG	4 cut(s)	192, 324, 325, 481
BsaHI	GRCGYC	4 cut(s)	99, 195, 207, 288
BsaI	GGTCTC	1 cut(s)	380
BsaJI	CCNNGG	5 cut(s)	94, 190, 273, 323, 462
BsaXI	ACNNNNNCTCC	2 cut(s)	273, 303
Bsc4I	CCNNNNNNNGG	2 cut(s)	457, 596
Bse118I	RCCGGY	4 cut(s)	104, 248, 305, 359
Bse1I	ACTGG	2 cut(s)	434, 590
BseDI	CCNNGG	5 cut(s)	94, 190, 273, 323, 462
BseGI	GGATG	2 cut(s)	333, 980
BseLI	CCNNNNNNNGG	2 cut(s)	457, 596
BseMII	CTCAG	4 cut(s)	222, 567, 650, 960
BseNI	ACTGG	2 cut(s)	434, 590
BseRI	GAGGAG	2 cut(s)	49, 122
BseSI	GKGCMC	2 cut(s)	315, 816
BseX3I	CGGCCG	1 cut(s)	459
BseXI	GCAGC	1 cut(s)	271
Bsh1285I	CGRYCG	1 cut(s)	462
BshFI	GGCC	7 cut(s)	7, 117, 461, 479, 560, 603, 761
BshNI	GGYRCC	1 cut(s)	98
BsiEI	CGRYCG	1 cut(s)	462
BsiHKAI	GWGCWC	1 cut(s)	975
BsiHKCI	CYCGRG	3 cut(s)	74, 323, 333
BsiSI	CCGG	9 cut(s)	49, 105, 183, 192, 249, 306, 324, 360, 480
BslFI	GGGAC	3 cut(s)	56, 434, 813
BslI	CCNNNNNNNGG	2 cut(s)	457, 596
BsmAI	GTCTC	3 cut(s)	160, 330, 380
BsmBI	CGTCTC	2 cut(s)	160, 330
BsmFI	GGGAC	3 cut(s)	56, 434, 813
BsnI	GGCC	7 cut(s)	7, 117, 461, 479, 560, 603, 761
Bso31I	GGTCTC	1 cut(s)	380
BsoBI	CYCGRG	3 cut(s)	74, 323, 333
Bsp1286I	GDGCHC	3 cut(s)	315, 816, 975
Bsp143I	GATC	6 cut(s)	26, 227, 340, 414, 740, 963
BspACI	CCGC	9 cut(s)	63, 79, 102, 108, 201, 303, 384, 458, 626
BspANI	GGCC	7 cut(s)	7, 117, 461, 479, 560, 603, 761
BspCNI	CTCAG	4 cut(s)	223, 568, 649, 961
BspHI	TCATGA	2 cut(s)	135, 664
BspLI	GGNNCC	4 cut(s)	100, 187, 283, 450
BspPI	GGATC	3 cut(s)	21, 748, 958
BspQI	GCTCTTC	1 cut(s)	249
BspT107I	GGYRCC	1 cut(s)	98
BspTI	CTTAAG	1 cut(s)	794
BspTNI	GGTCTC	1 cut(s)	380
BsrBI	CCGCTC	1 cut(s)	79
BsrFI	RCCGGY	4 cut(s)	104, 248, 305, 359
BsrI	ACTGG	2 cut(s)	434, 590
BssAI	RCCGGY	4 cut(s)	104, 248, 305, 359
BssECI	CCNNGG	5 cut(s)	94, 190, 273, 323, 462
BssMI	GATC	6 cut(s)	26, 227, 340, 414, 740, 963
BssNI	GRCGYC	4 cut(s)	99, 195, 207, 288
BssT1I	CCWWGG	1 cut(s)	273
Bst4CI	ACNGT	1 cut(s)	448
Bst6I	CTCTTC	2 cut(s)	249, 491
BstACI	GRCGYC	4 cut(s)	99, 195, 207, 288
BstAFI	CTTAAG	1 cut(s)	794
BstC8I	GCNNGC	7 cut(s)	46, 106, 119, 250, 264, 610, 769
BstDEI	CTNAG	7 cut(s)	231, 393, 537, 576, 636, 876, 969
BstF5I	GGATG	2 cut(s)	333, 980
BstH2I	RGCGCY	2 cut(s)	102, 774
BstHHI	GCGC	2 cut(s)	101, 773
BstKTI	GATC	6 cut(s)	29, 230, 343, 417, 743, 966
BstMAI	GTCTC	3 cut(s)	160, 330, 380
BstMBI	GATC	6 cut(s)	26, 227, 340, 414, 740, 963
BstMCI	CGRYCG	1 cut(s)	462
BstMWI	GCNNNNNNNGC	7 cut(s)	105, 114, 319, 557, 572, 609, 779
BstSCI	CCNGG	4 cut(s)	190, 322, 323, 479
BstSLI	GKGCMC	2 cut(s)	315, 816
BstV1I	GCAGC	1 cut(s)	271
BstX2I	RGATCY	3 cut(s)	26, 227, 740
BstYI	RGATCY	3 cut(s)	26, 227, 740
BstZI	CGGCCG	1 cut(s)	459
BsuRI	GGCC	7 cut(s)	7, 117, 461, 479, 560, 603, 761
BtgZI	GCGATG	2 cut(s)	4, 373
BtsCI	GGATG	2 cut(s)	333, 980
BtsIMutI	CAGTG	2 cut(s)	410, 852
Cac8I	GCNNGC	7 cut(s)	46, 106, 119, 250, 264, 610, 769
CciI	TCATGA	2 cut(s)	135, 664
CfoI	GCGC	2 cut(s)	101, 773
Cfr10I	RCCGGY	4 cut(s)	104, 248, 305, 359
Cfr13I	GGNCC	1 cut(s)	448
Cfr9I	CCCGGG	1 cut(s)	323
CseI	GACGC	1 cut(s)	184
Csp6I	GTAC	3 cut(s)	32, 397, 487
CviAII	CATG	4 cut(s)	136, 421, 605, 665
CviQI	GTAC	3 cut(s)	32, 397, 487
DdeI	CTNAG	7 cut(s)	231, 393, 537, 576, 636, 876, 969
DinI	GGCGCC	1 cut(s)	100
DpnI	GATC	6 cut(s)	28, 229, 342, 416, 742, 965
DpnII	GATC	6 cut(s)	26, 227, 340, 414, 740, 963
EaeI	YGGCCR	3 cut(s)	115, 459, 601
EagI	CGGCCG	1 cut(s)	459
Eam1104I	CTCTTC	2 cut(s)	249, 491
EarI	CTCTTC	2 cut(s)	249, 491
EciI	GGCGGA	1 cut(s)	52
Ecl136II	GAGCTC	1 cut(s)	973
EclXI	CGGCCG	1 cut(s)	459
Eco130I	CCWWGG	1 cut(s)	273
Eco147I	AGGCCT	1 cut(s)	7
Eco24I	GRGCYC	1 cut(s)	975
Eco31I	GGTCTC	1 cut(s)	380
Eco32I	GATATC	1 cut(s)	178
Eco47I	GGWCC	1 cut(s)	448
Eco52I	CGGCCG	1 cut(s)	459
Eco53kI	GAGCTC	1 cut(s)	973
Eco88I	CYCGRG	3 cut(s)	74, 323, 333
EcoICRI	GAGCTC	1 cut(s)	973
EcoRV	GATATC	1 cut(s)	178
EcoT14I	CCWWGG	1 cut(s)	273
EcoT38I	GRGCYC	1 cut(s)	975
EgeI	GGCGCC	1 cut(s)	100
EheI	GGCGCC	1 cut(s)	100
ErhI	CCWWGG	1 cut(s)	273
Esp3I	CGTCTC	2 cut(s)	160, 330
FaeI	CATG	4 cut(s)	139, 424, 608, 668
FaiI	YATR	8 cut(s)	137, 246, 422, 549, 587, 606, 666, 765
FalI	AAGNNNNNCTT	2 cut(s)	246, 278
FaqI	GGGAC	3 cut(s)	56, 434, 813
FatI	CATG	4 cut(s)	135, 420, 604, 664
FauI	CCCGC	1 cut(s)	310
FbaI	TGATCA	1 cut(s)	414
Fnu4HI	GCNGC	6 cut(s)	102, 109, 201, 260, 459, 626
FokI	GGATG	2 cut(s)	340, 967
FriOI	GRGCYC	1 cut(s)	975
Fsp4HI	GCNGC	6 cut(s)	102, 109, 201, 260, 459, 626
GlaI	GCGC	2 cut(s)	100, 772
GluI	GCNGC	6 cut(s)	102, 109, 201, 260, 459, 626
HaeII	RGCGCY	2 cut(s)	102, 774
HaeIII	GGCC	7 cut(s)	7, 117, 461, 479, 560, 603, 761
HapII	CCGG	9 cut(s)	49, 105, 183, 192, 249, 306, 324, 360, 480
HgaI	GACGC	1 cut(s)	184
HhaI	GCGC	2 cut(s)	101, 773
Hin1I	GRCGYC	4 cut(s)	99, 195, 207, 288
Hin1II	CATG	4 cut(s)	139, 424, 608, 668
Hin6I	GCGC	2 cut(s)	99, 771
HinP1I	GCGC	2 cut(s)	99, 771
HincII	GTYRAC	1 cut(s)	439
HindII	GTYRAC	1 cut(s)	439
HindIII	AAGCTT	1 cut(s)	958
HinfI	GANTC	2 cut(s)	39, 900
HpaII	CCGG	9 cut(s)	49, 105, 183, 192, 249, 306, 324, 360, 480
HphI	GGTGA	2 cut(s)	607, 892
Hpy166II	GTNNAC	2 cut(s)	34, 439
Hpy188I	TCNGA	2 cut(s)	232, 934
Hpy188III	TCNNGA	5 cut(s)	136, 451, 521, 665, 988
Hpy8I	GTNNAC	2 cut(s)	34, 439
Hpy99I	CGWCG	4 cut(s)	200, 290, 293, 494
HpyAV	CCTTC	5 cut(s)	18, 76, 469, 941, 985
HpyCH4III	ACNGT	1 cut(s)	448
HpyCH4IV	ACGT	2 cut(s)	207, 288
HpyCH4V	TGCA	5 cut(s)	266, 410, 746, 841, 955
HpyF10VI	GCNNNNNNNGC	7 cut(s)	105, 114, 319, 557, 572, 609, 779
HpyF3I	CTNAG	7 cut(s)	231, 393, 537, 576, 636, 876, 969
HpySE526I	ACGT	2 cut(s)	207, 288
Hsp92I	GRCGYC	4 cut(s)	99, 195, 207, 288
Hsp92II	CATG	4 cut(s)	139, 424, 608, 668
HspAI	GCGC	2 cut(s)	99, 771
KasI	GGCGCC	1 cut(s)	98
KroI	GCCGGC	2 cut(s)	104, 248
KroNI	GCCGGC	2 cut(s)	106, 250
Ksp22I	TGATCA	1 cut(s)	414
Kzo9I	GATC	6 cut(s)	26, 227, 340, 414, 740, 963
LguI	GCTCTTC	1 cut(s)	249
LmnI	GCTCC	2 cut(s)	51, 281
Lsp1109I	GCAGC	1 cut(s)	271
LweI	GCATC	4 cut(s)	120, 621, 775, 858
MaeII	ACGT	2 cut(s)	207, 288
MaeIII	GTNAC	1 cut(s)	511
MalI	GATC	6 cut(s)	28, 229, 342, 416, 742, 965
MbiI	CCGCTC	1 cut(s)	79
MboI	GATC	6 cut(s)	26, 227, 340, 414, 740, 963
MboII	GAAGA	3 cut(s)	266, 484, 508
MflI	RGATCY	3 cut(s)	26, 227, 740
MhlI	GDGCHC	3 cut(s)	315, 816, 975
MlsI	TGGCCA	1 cut(s)	603
MluCI	AATT	2 cut(s)	294, 655
MluNI	TGGCCA	1 cut(s)	603
Mly113I	GGCGCC	1 cut(s)	99
MlyI	GAGTC	2 cut(s)	48, 909
Mox20I	TGGCCA	1 cut(s)	603
MreI	CGCCGGCG	1 cut(s)	104
MroNI	GCCGGC	2 cut(s)	104, 248
MscI	TGGCCA	1 cut(s)	603
MseI	TTAA	5 cut(s)	348, 354, 582, 795, 804
Msp20I	TGGCCA	1 cut(s)	603
MspA1I	CMGCKG	1 cut(s)	203
MspCI	CTTAAG	1 cut(s)	794
MspI	CCGG	9 cut(s)	49, 105, 183, 192, 249, 306, 324, 360, 480
MspR9I	CCNGG	4 cut(s)	192, 324, 325, 481
MwoI	GCNNNNNNNGC	7 cut(s)	105, 114, 319, 557, 572, 609, 779
NaeI	GCCGGC	2 cut(s)	106, 250
NarI	GGCGCC	1 cut(s)	99
NciI	CCSGG	4 cut(s)	192, 324, 325, 481
NdeII	GATC	6 cut(s)	26, 227, 340, 414, 740, 963
NgoMIV	GCCGGC	2 cut(s)	104, 248
NlaIII	CATG	4 cut(s)	139, 424, 608, 668
NlaIV	GGNNCC	4 cut(s)	100, 187, 283, 450
NmeAIII	GCCGAG	2 cut(s)	75, 487
NmuCI	GTSAC	1 cut(s)	511
PagI	TCATGA	2 cut(s)	135, 664
PceI	AGGCCT	1 cut(s)	7
PciSI	GCTCTTC	1 cut(s)	249
PcsI	WCGNNNNNNNCGW	2 cut(s)	27, 204
PdiI	GCCGGC	2 cut(s)	106, 250
PflMI	CCANNNNNTGG	1 cut(s)	596
PkrI	GCNGC	6 cut(s)	103, 110, 202, 261, 460, 627
PleI	GAGTC	2 cut(s)	47, 908
PluTI	GGCGCC	1 cut(s)	102
PpsI	GAGTC	2 cut(s)	47, 908
PshBI	ATTAAT	1 cut(s)	354
Psp124BI	GAGCTC	1 cut(s)	975
PspN4I	GGNNCC	4 cut(s)	100, 187, 283, 450
PspPI	GGNCC	1 cut(s)	448
PsuI	RGATCY	3 cut(s)	26, 227, 740
RsaI	GTAC	3 cut(s)	33, 398, 488
RsaNI	GTAC	3 cut(s)	32, 397, 487
SacI	GAGCTC	1 cut(s)	975
SapI	GCTCTTC	1 cut(s)	249
SaqAI	TTAA	5 cut(s)	348, 354, 582, 795, 804
SatI	GCNGC	6 cut(s)	102, 109, 201, 260, 459, 626
Sau3AI	GATC	6 cut(s)	26, 227, 340, 414, 740, 963
Sau96I	GGNCC	1 cut(s)	448
ScaI	AGTACT	1 cut(s)	398
SchI	GAGTC	2 cut(s)	48, 909
ScrFI	CCNGG	4 cut(s)	192, 324, 325, 481
SduI	GDGCHC	3 cut(s)	315, 816, 975
SfaNI	GCATC	4 cut(s)	120, 621, 775, 858
SfoI	GGCGCC	1 cut(s)	100
SgrAI	CRCCGGYG	2 cut(s)	104, 305
SinI	GGWCC	1 cut(s)	448
SmaI	CCCGGG	1 cut(s)	325
SmlI	CTYRAG	1 cut(s)	794
SmoI	CTYRAG	1 cut(s)	794
Sse9I	AATT	2 cut(s)	294, 655
SseBI	AGGCCT	1 cut(s)	7
SsiI	CCGC	9 cut(s)	63, 79, 102, 108, 201, 303, 384, 458, 626
SspDI	GGCGCC	1 cut(s)	98
SstI	GAGCTC	1 cut(s)	975
StuI	AGGCCT	1 cut(s)	7
StyD4I	CCNGG	4 cut(s)	190, 322, 323, 479
StyI	CCWWGG	1 cut(s)	273
TaaI	ACNGT	1 cut(s)	448
TaiI	ACGT	2 cut(s)	210, 291
TaqI	TCGA	2 cut(s)	903, 987
TasI	AATT	2 cut(s)	294, 655
TatI	WGTACW	1 cut(s)	396
TauI	GCSGC	5 cut(s)	104, 111, 203, 461, 628
Tru1I	TTAA	5 cut(s)	348, 354, 582, 795, 804
Tru9I	TTAA	5 cut(s)	348, 354, 582, 795, 804
TscAI	CASTG	2 cut(s)	417, 859
TseFI	GTSAC	1 cut(s)	511
TseI	GCWGC	1 cut(s)	259
Tsp45I	GTSAC	1 cut(s)	511
TspDTI	ATGAA	1 cut(s)	152
TspGWI	ACGGA	3 cut(s)	19, 58, 725
TspMI	CCCGGG	1 cut(s)	323
TspRI	CASTG	2 cut(s)	417, 859
Van91I	CCANNNNNTGG	1 cut(s)	596
Vha464I	CTTAAG	1 cut(s)	794
VpaK11BI	GGWCC	1 cut(s)	448
VspI	ATTAAT	1 cut(s)	354
XmaI	CCCGGG	1 cut(s)	323
ZraI	GACGTC	2 cut(s)	208, 289
ZrmI	AGTACT	1 cut(s)	398

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.