MD11G1267100.v1.1

No description available

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Forward (+)
38211517 .. 38213855
2339 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1267100.v1.1.491

Sequence Viewer

Length: 303 bp
ATGGCGGTTACGAGAGAGAGGTCGAATGTGTTGAAGGATTTGTCGCAGGATATGGAAGTGATGGCGAGCCATTTGTTCAAAGAAGGGTACTTTAAAGATGCCAATTTCTTGTTTGTGAATGGTGATAGGTTGGATATTAGCTGTTTCAACAACAGCTATGGCCGCAGTTTCATAAGGTTTGCGGTCGAAAGTTTTGCCAGAGACAACCAGGTGATTGCAAAATGGTTGTCAGGCTCGGACTTGAAAAAGGTGGCCCTCCTTGGTTGTGCCCTTCCCTTGCCAGAAAGAGTGTTTTTGGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

101

Amino Acids

11.33

Weight (kDa)

7.78

Isoelectric Point (pI)

23.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 5, 163, 182
AcoI YGGCCR 1 cut(s) 160
AfaI GTAC 1 cut(s) 89
AgsI TTSAA 4 cut(s) 34, 79, 148, 244
AjnI CCWGG 1 cut(s) 207
AluBI AGCT 2 cut(s) 141, 156
AluI AGCT 2 cut(s) 141, 156
Alw26I GTCTC 1 cut(s) 195
AoxI GGCC 2 cut(s) 160, 252
ArsI GACNNNNNNTTYG 2 cut(s) 212, 244
AspS9I GGNCC 1 cut(s) 253
AsuHPI GGTGA 2 cut(s) 134, 223
BaeGI GKGCMC 1 cut(s) 271
BccI CCATC 1 cut(s) 55
BcgI CGANNNNNNTGC 2 cut(s) 176, 210
BciT130I CCWGG 1 cut(s) 209
BcoDI GTCTC 1 cut(s) 195
BisI GCNGC 1 cut(s) 163
BlsI GCNGC 1 cut(s) 164
Bme1390I CCNGG 1 cut(s) 209
BmgT120I GGNCC 1 cut(s) 253
BmrFI CCNGG 1 cut(s) 209
BmsI GCATC 1 cut(s) 88
BsaJI CCNNGG 1 cut(s) 259
BseBI CCWGG 1 cut(s) 209
BseDI CCNNGG 1 cut(s) 259
BseSI GKGCMC 1 cut(s) 271
Bsh1285I CGRYCG 1 cut(s) 186
BshFI GGCC 2 cut(s) 162, 254
BsiEI CGRYCG 1 cut(s) 186
BsmAI GTCTC 1 cut(s) 195
BsnI GGCC 2 cut(s) 162, 254
Bsp1286I GDGCHC 1 cut(s) 271
BspACI CCGC 3 cut(s) 5, 163, 182
BspANI GGCC 2 cut(s) 162, 254
BssECI CCNNGG 1 cut(s) 259
BssT1I CCWWGG 1 cut(s) 259
Bst2UI CCWGG 1 cut(s) 209
BstC8I GCNNGC 1 cut(s) 67
BstMAI GTCTC 1 cut(s) 195
BstMCI CGRYCG 1 cut(s) 186
BstMWI GCNNNNNNNGC 1 cut(s) 162
BstNI CCWGG 1 cut(s) 209
BstSCI CCNGG 1 cut(s) 207
BstSLI GKGCMC 1 cut(s) 271
BsuRI GGCC 2 cut(s) 162, 254
Cac8I GCNNGC 1 cut(s) 67
Cfr13I GGNCC 1 cut(s) 253
CsiI ACCWGGT 1 cut(s) 207
Csp6I GTAC 1 cut(s) 88
CviJI RGCY 7 cut(s) 69, 141, 156, 162, 234, 254, 300
CviKI_1 RGCY 7 cut(s) 69, 141, 156, 162, 234, 254, 300
CviQI GTAC 1 cut(s) 88
DraI TTTAAA 1 cut(s) 94
EaeI YGGCCR 1 cut(s) 160
Eco130I CCWWGG 1 cut(s) 259
EcoRII CCWGG 1 cut(s) 207
EcoT14I CCWWGG 1 cut(s) 259
ErhI CCWWGG 1 cut(s) 259
FaiI YATR 3 cut(s) 53, 159, 173
Fnu4HI GCNGC 1 cut(s) 163
Fsp4HI GCNGC 1 cut(s) 163
GluI GCNGC 1 cut(s) 163
HaeIII GGCC 2 cut(s) 162, 254
HphI GGTGA 2 cut(s) 134, 223
Hpy188I TCNGA 1 cut(s) 238
HpyAV CCTTC 3 cut(s) 28, 77, 281
HpyCH4V TGCA 1 cut(s) 218
HpyF10VI GCNNNNNNNGC 1 cut(s) 162
LpnPI CCDG 6 cut(s) 32, 194, 211, 216, 221, 294
LweI GCATC 1 cut(s) 88
MabI ACCWGGT 1 cut(s) 207
MaeIII GTNAC 1 cut(s) 7
MhlI GDGCHC 1 cut(s) 271
MluCI AATT 1 cut(s) 103
MmeI TCCRAC 1 cut(s) 111
MnlI CCTC 2 cut(s) 12, 266
MseI TTAA 1 cut(s) 93
MspR9I CCNGG 1 cut(s) 209
MvaI CCWGG 1 cut(s) 209
MwoI GCNNNNNNNGC 1 cut(s) 162
PkrI GCNGC 1 cut(s) 164
Psp6I CCWGG 1 cut(s) 207
PspGI CCWGG 1 cut(s) 207
PspPI GGNCC 1 cut(s) 253
RsaI GTAC 1 cut(s) 89
RsaNI GTAC 1 cut(s) 88
SaqAI TTAA 1 cut(s) 93
SatI GCNGC 1 cut(s) 163
Sau96I GGNCC 1 cut(s) 253
ScrFI CCNGG 1 cut(s) 209
SduI GDGCHC 1 cut(s) 271
SetI ASST 7 cut(s) 23, 131, 143, 158, 179, 213, 252
SexAI ACCWGGT 1 cut(s) 207
SfaNI GCATC 1 cut(s) 88
Sse9I AATT 1 cut(s) 103
SsiI CCGC 3 cut(s) 5, 163, 182
StyD4I CCNGG 1 cut(s) 207
StyI CCWWGG 1 cut(s) 259
TaqI TCGA 2 cut(s) 23, 186
TasI AATT 1 cut(s) 103
TauI GCSGC 1 cut(s) 165
Tru1I TTAA 1 cut(s) 93
Tru9I TTAA 1 cut(s) 93
TspDTI ATGAA 1 cut(s) 160
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.