Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0010920

Physical Location & Seq

Genomic Coordinates Reverse (-)

42735403 .. 42737307

Gene Structure 1905 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1315100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1905 bp

ATGACCCTCTTTCTAAGAAGATCCTCCTCATCCGCCCAAAGCCACCTCCTCTACTCTCAACCGCACCCAAGAACACCACTCTCAGATGTCCACCTACGCCGCCGCTTCACCGCCGAGCTATGCTCTTTCTATCAGGGACGAGAAAGACGGCACCGCCGCCGAGAGCAAGTATGCCTTCCTAGTGGTTGCTCTCTGCCCCTGTCTGGTTTGCTTCATTCTTCTCCTCGTCGTTATCTCTATCATTCTCATTGTCAAATTCCATTTCTTTTGCCACACCCCACTTCACTCTTTATTCTACAAGAAAAATTGCTAACTACATCCATTACAATCCCCAATTTTACAACTTCATTGGTTGGCATTGAATGTGGTCTTAGGGGGTTTTCTAGTGCCACCGCTGGTGGTTCGGATTCGGGTGCTGAAACTGATAGTGAGGACGAGGATAGGAGGGGGAGTGTTCATGTTAGTTCTAGTGCAGACCCGGAAGAGGTCGACAGGGTATGCAAGGTGATCGACGAATTGTTTGCCTTAGATCGGAATATGGAAGCGGTTCTTGATGAATGCGGGATTCAGTTGTCCCATGATTTGGTTGTGGCGGTGTTGAAACGCTTCCAGCACGCTAGAAAACCCGCCTTTCGGTTTTTCTGTTGGGCTGGGCAGAAGCCAGGGTTTTCGCATGATTCTAGGACTTACAATTCGATGATGAGCATTTTAGGAAAGACCAGGCAGTTTGAGACCATGGTGTCGCTGCTCGAAGAAATGGGAGTGAAGGAGCTTTTGACAATGGAAACATTTGTGATTGCTTTTAAAGCTTTTGCTGCTGCCAAGGAGAGGAAGAAAGCTGTTGGCATTTTTGAACTGATGAAGTCCTACAAGTTCAAAGTTGGCATCGATACTATTAATTGCTTGCTTGATACTCTTGGAAGGGCAAAGCTAGGAAAAGAAATGCAATTGCTTTTCGAGAAGTTGAAGGGGAGGTTTACACCAAATTTACAAACTTATACCGTACTGCTAAACGGGTGGTGTAGCTCAAAGAATTTAATGGAAGCAGGGAGGGTGTGGAATGAGATGGTTGACAAGGGATTTAAGCCTGATATTGTTGCGTATAATACAATGCTCGGAGGGTTGTTGAGGGGTCACAAGAGGTCTGATGCTATCAAGTTGTTTGAGGTCATGAAAGCCAAGGGCCCATCTCCCAACGTTAGAAGCTATAGTATTCTGATTCAAGATTTCTGCAAGCAAAAAAAGATGAAAGAAGCAGTTGACTCTTTTTATGAAATGCGAGAATCTGGGTGCCAGCCAGATGTTGCGGTTTACACGTGCTTAATTACAGGGTTTGGAAATCAGAAGAAGATGGAAACAGTTTATGAATTGTTGAAGGAGATGAAGGAAACCGGTTGCACTCCTGATGGGCGGACATACAATGCCTTGATTAAAGTGATGACGACGCAGCAGCGAATGCCGGATGATGCAGTGCGGATATACAAGAAGATGATTCAAAATGGCGTTGAGCCATCAATACACACTTTTAACATGATCATGAAGTCTTATTTTCAGACTAGAAATTATGATATGGGTTGTGCAGTATGGGATGAGATGATTCAGAAGGGGTTTTGCCCTGATGACAACTCATATACTGTTCTCATTGGAGGTCTTATAAGTCAGGGAAGATCAGGAGAGGCCTGTAAATATCTAGAGGAAATGGTTGAGAAAGGAATGAAACCTCCCCAGCTTGATTTAAATAAGTTTGCAGCCGATTTCTCCAGAGCTGGAAAACCTGATATTCTTGAGGAGTTGGCGCAGAAGATGAAGTTTTCTGGTAAATTTGAAGTCTCCAATGTCTTTGCAAGGTGGGCTGAGATGATGAAGAAAAGGGTAAAGAGAAGAGATCCTATTGAAAATGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

635

Amino Acids

72.05

Weight (kDa)

9.06

Isoelectric Point (pI)

43.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	328 - 376	6.2e-13	PPR repeat family
PPR_3	PF13812	352 - 409	8.8e-11	Pentatricopeptide repeat domain
PPR_2	PF13041	363 - 412	1.2e-14	PPR repeat family
PPR_1	PF12854	394 - 427	2.2e-06	PPR repeat
PPR_2	PF13041	406 - 446	7.6e-10	PPR repeat family
PPR_3	PF13812	424 - 480	8.5e-13	Pentatricopeptide repeat domain
PPR_2	PF13041	433 - 479	1.4e-13	PPR repeat family
TPR_24	PF23276	438 - 529	7.1e-06	Fungal tetratrico peptide repeats
PPR_long	PF17177	448 - 569	4.9e-10	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	474 - 516	7.6e-07	PPR repeat family
PPR_2	PF13041	506 - 551	2.9e-10	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0010920)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G62470 AT3G62540 AT5G14820
fragaria_vesca	FvH4_5g39420
malus_domestica	MD11G1315100.v1.1
prunus_persica	Prupe.8G271400_v2.0.a1 Prupe.8G271400_v2.0.a1
pyrus_communis	pycom03g23410 pycom11g27530
rosa_chinensis	RchiOBHm_Chr7g0241731
rosa_laevigata	RLG00000000549
rosa_multiflora	Rmu_co8405791.1_g000001 Rmu_sc0002268.1_g000001
rosa_roxburghii	Rroxscaffold_3G00218720
rosa_rugosa	Rorug07G0346800
rosa_samantha	Rh7AG501200 Rh7BG472500 Rh7CG517500 Rh7DG486200
rosa_wichuraiana	Rw7G042360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1655
AasI	GACNNNNNNGTC	1 cut(s)	739
AccB1I	GGYRCC	2 cut(s)	150, 1290
AccB7I	CCANNNNNTGG	1 cut(s)	583
AccI	GTMKAC	1 cut(s)	489
AclI	AACGTT	1 cut(s)	1197
AclWI	GGATC	2 cut(s)	15, 1880
AcsI	RAATTY	4 cut(s)	255, 985, 1033, 1820
AcvI	CACGTG	1 cut(s)	1317
AfaI	GTAC	1 cut(s)	1005
AfiI	CCNNNNNNNGG	6 cut(s)	203, 484, 531, 583, 633, 828
AflIII	ACRYGT	1 cut(s)	1314
AgeI	ACCGGT	1 cut(s)	1391
AjnI	CCWGG	2 cut(s)	661, 719
AluBI	AGCT	9 cut(s)	118, 772, 809, 839, 931, 1026, 1206, 1729, 1766
AluI	AGCT	9 cut(s)	118, 772, 809, 839, 931, 1026, 1206, 1729, 1766
Alw26I	GTCTC	2 cut(s)	725, 1834
AlwI	GGATC	2 cut(s)	15, 1880
AoxI	GGCC	2 cut(s)	1183, 1677
ApaI	GGGCCC	1 cut(s)	1187
ApeKI	GCWGC	6 cut(s)	745, 815, 818, 1447, 1450, 1748
ApoI	RAATTY	4 cut(s)	255, 985, 1033, 1820
ArsI	GACNNNNNNTTYG	4 cut(s)	503, 535, 676, 708
AseI	ATTAAT	1 cut(s)	897
AsiGI	ACCGGT	1 cut(s)	1391
Asp700I	GAANNNNTTC	2 cut(s)	546, 605
AspLEI	GCGC	1 cut(s)	1798
AspS9I	GGNCC	2 cut(s)	1183, 1184
AsuC2I	CCSGG	1 cut(s)	479
AsuHPI	GGTGA	2 cut(s)	100, 517
BaeGI	GKGCMC	1 cut(s)	1187
BanI	GGYRCC	2 cut(s)	150, 1290
BanII	GRGCYC	1 cut(s)	1187
BbrPI	CACGTG	1 cut(s)	1317
BbvI	GCAGC	6 cut(s)	732, 802, 805, 1459, 1462, 1760
BccI	CCATC	5 cut(s)	1060, 1195, 1345, 1400, 1519
BceAI	ACGGC	1 cut(s)	164
BcgI	CGANNNNNNTGC	4 cut(s)	490, 503, 524, 537
BciT130I	CCWGG	2 cut(s)	663, 721
BclI	TGATCA	1 cut(s)	1533
BcnI	CCSGG	1 cut(s)	479
BcoDI	GTCTC	2 cut(s)	725, 1834
BfaI	CTAG	8 cut(s)	180, 384, 468, 618, 681, 932, 1557, 1691
BfmI	CTRYAG	1 cut(s)	1207
BisI	GCNGC	9 cut(s)	100, 103, 157, 746, 816, 819, 1448, 1451, 1749
BlsI	GCNGC	9 cut(s)	101, 104, 158, 747, 817, 820, 1449, 1452, 1750
Bme1390I	CCNGG	3 cut(s)	479, 663, 721
BmgT120I	GGNCC	2 cut(s)	1183, 1184
BmiI	GGNNCC	3 cut(s)	152, 1185, 1292
BmrFI	CCNGG	3 cut(s)	479, 663, 721
BmsI	GCATC	3 cut(s)	894, 1138, 1456
BplI	GAGNNNNNCTC	2 cut(s)	107, 139
BpmI	CTGGAG	1 cut(s)	1744
BpuEI	CTTGAG	1 cut(s)	1805
BpuMI	CCSGG	1 cut(s)	479
Bsa29I	ATCGAT	1 cut(s)	888
BsaAI	YACGTR	1 cut(s)	1317
BsaI	GGTCTC	1 cut(s)	725
BsaJI	CCNNGG	4 cut(s)	662, 735, 822, 1179
BsaWI	WCCGGW	1 cut(s)	1391
BsaXI	ACNNNNNCTCC	2 cut(s)	436, 466
Bsc4I	CCNNNNNNNGG	6 cut(s)	203, 484, 531, 583, 633, 828
Bse118I	RCCGGY	1 cut(s)	1391
BseBI	CCWGG	2 cut(s)	663, 721
BseCI	ATCGAT	1 cut(s)	888
BseDI	CCNNGG	4 cut(s)	662, 735, 822, 1179
BseGI	GGATG	4 cut(s)	29, 317, 1468, 1594
BseLI	CCNNNNNNNGG	6 cut(s)	203, 484, 531, 583, 633, 828
BseMII	CTCAG	2 cut(s)	96, 1845
BseRI	GAGGAG	4 cut(s)	16, 38, 213, 1802
BseSI	GKGCMC	1 cut(s)	1187
BseXI	GCAGC	6 cut(s)	732, 802, 805, 1459, 1462, 1760
BseYI	CCCAGC	2 cut(s)	650, 1725
BsgI	GTGCAG	2 cut(s)	492, 1599
BshFI	GGCC	2 cut(s)	1185, 1679
BshNI	GGYRCC	2 cut(s)	150, 1290
BshTI	ACCGGT	1 cut(s)	1391
BshVI	ATCGAT	1 cut(s)	888
BsiSI	CCGG	3 cut(s)	479, 1392, 1460
BslFI	GGGAC	2 cut(s)	150, 559
BslI	CCNNNNNNNGG	6 cut(s)	203, 484, 531, 583, 633, 828
BsmAI	GTCTC	2 cut(s)	725, 1834
BsmFI	GGGAC	2 cut(s)	150, 559
BsmI	GAATGC	2 cut(s)	563, 1461
BsnI	GGCC	2 cut(s)	1185, 1679
Bso31I	GGTCTC	1 cut(s)	725
Bsp120I	GGGCCC	1 cut(s)	1183
Bsp1286I	GDGCHC	1 cut(s)	1187
Bsp143I	GATC	6 cut(s)	20, 507, 529, 1533, 1667, 1885
Bsp19I	CCATGG	1 cut(s)	735
BspANI	GGCC	2 cut(s)	1185, 1679
BspCNI	CTCAG	2 cut(s)	95, 1846
BspDI	ATCGAT	1 cut(s)	888
BspHI	TCATGA	2 cut(s)	1170, 1536
BspLI	GGNNCC	3 cut(s)	152, 1185, 1292
BspPI	GGATC	2 cut(s)	15, 1880
BspT107I	GGYRCC	2 cut(s)	150, 1290
BspTNI	GGTCTC	1 cut(s)	725
BsrFI	RCCGGY	1 cut(s)	1391
BssAI	RCCGGY	1 cut(s)	1391
BssECI	CCNNGG	4 cut(s)	662, 735, 822, 1179
BssMI	GATC	6 cut(s)	20, 507, 529, 1533, 1667, 1885
BssT1I	CCWWGG	3 cut(s)	735, 822, 1179
Bst2UI	CCWGG	2 cut(s)	663, 721
Bst4CI	ACNGT	3 cut(s)	1003, 1360, 1636
Bst6I	CTCTTC	2 cut(s)	477, 1876
BstAPI	GCANNNNNTGC	1 cut(s)	1456
BstBAI	YACGTR	1 cut(s)	1317
BstC8I	GCNNGC	4 cut(s)	615, 905, 1235, 1295
BstDEI	CTNAG	5 cut(s)	14, 82, 371, 526, 1854
BstDSI	CCRYGG	1 cut(s)	735
BstF5I	GGATG	4 cut(s)	29, 317, 1468, 1594
BstHHI	GCGC	1 cut(s)	1798
BstKTI	GATC	6 cut(s)	23, 510, 532, 1536, 1670, 1888
BstMAI	GTCTC	2 cut(s)	725, 1834
BstMBI	GATC	6 cut(s)	20, 507, 529, 1533, 1667, 1885
BstMWI	GCNNNNNNNGC	4 cut(s)	806, 815, 1456, 1850
BstNI	CCWGG	2 cut(s)	663, 721
BstSCI	CCNGG	3 cut(s)	477, 661, 719
BstSFI	CTRYAG	1 cut(s)	1207
BstSLI	GKGCMC	1 cut(s)	1187
BstV1I	GCAGC	6 cut(s)	732, 802, 805, 1459, 1462, 1760
BstX2I	RGATCY	2 cut(s)	20, 1885
BstYI	RGATCY	2 cut(s)	20, 1885
Bsu15I	ATCGAT	1 cut(s)	888
BsuRI	GGCC	2 cut(s)	1185, 1679
BsuTUI	ATCGAT	1 cut(s)	888
BtgI	CCRYGG	1 cut(s)	735
BtsCI	GGATG	4 cut(s)	29, 317, 1468, 1594
BtsI	GCAGTG	1 cut(s)	1476
BtsIMutI	CAGTG	1 cut(s)	1476
Cac8I	GCNNGC	4 cut(s)	615, 905, 1235, 1295
CciI	TCATGA	2 cut(s)	1170, 1536
CfoI	GCGC	1 cut(s)	1798
Cfr10I	RCCGGY	1 cut(s)	1391
Cfr13I	GGNCC	2 cut(s)	1183, 1184
ClaI	ATCGAT	1 cut(s)	888
CseI	GACGC	1 cut(s)	1453
Csp6I	GTAC	1 cut(s)	1004
CspAI	ACCGGT	1 cut(s)	1391
CviAII	CATG	7 cut(s)	458, 578, 674, 736, 1171, 1531, 1537
CviQI	GTAC	1 cut(s)	1004
DdeI	CTNAG	5 cut(s)	14, 82, 371, 526, 1854
DpnI	GATC	6 cut(s)	22, 509, 531, 1535, 1669, 1887
DpnII	GATC	6 cut(s)	20, 507, 529, 1533, 1667, 1885
DraI	TTTAAA	2 cut(s)	805, 1737
DrdI	GACNNNNNNGTC	1 cut(s)	739
DseDI	GACNNNNNNGTC	1 cut(s)	739
Eam1104I	CTCTTC	2 cut(s)	477, 1876
EarI	CTCTTC	2 cut(s)	477, 1876
EciI	GGCGGA	2 cut(s)	22, 1426
Eco130I	CCWWGG	3 cut(s)	735, 822, 1179
Eco147I	AGGCCT	1 cut(s)	1679
Eco24I	GRGCYC	1 cut(s)	1187
Eco31I	GGTCTC	1 cut(s)	725
Eco72I	CACGTG	1 cut(s)	1317
EcoO109I	RGGNCCY	1 cut(s)	1183
EcoRII	CCWGG	2 cut(s)	661, 719
EcoT14I	CCWWGG	3 cut(s)	735, 822, 1179
EcoT38I	GRGCYC	1 cut(s)	1187
ErhI	CCWWGG	3 cut(s)	735, 822, 1179
FaeI	CATG	7 cut(s)	461, 581, 677, 739, 1174, 1534, 1540
FalI	AAGNNNNNCTT	4 cut(s)	159, 191, 534, 566
FaqI	GGGAC	2 cut(s)	150, 559
FatI	CATG	7 cut(s)	457, 577, 673, 735, 1170, 1530, 1536
FauI	CCCGC	2 cut(s)	554, 634
FbaI	TGATCA	1 cut(s)	1533
FblI	GTMKAC	1 cut(s)	489
Fnu4HI	GCNGC	9 cut(s)	100, 103, 157, 746, 816, 819, 1448, 1451, 1749
FokI	GGATG	4 cut(s)	16, 304, 1475, 1601
FriOI	GRGCYC	1 cut(s)	1187
Fsp4HI	GCNGC	9 cut(s)	100, 103, 157, 746, 816, 819, 1448, 1451, 1749
FspBI	CTAG	8 cut(s)	180, 384, 468, 618, 681, 932, 1557, 1691
GlaI	GCGC	1 cut(s)	1797
GluI	GCNGC	9 cut(s)	100, 103, 157, 746, 816, 819, 1448, 1451, 1749
GsaI	CCCAGC	2 cut(s)	654, 1729
GsuI	CTGGAG	1 cut(s)	1744
HaeIII	GGCC	2 cut(s)	1185, 1679
HapII	CCGG	3 cut(s)	479, 1392, 1460
HgaI	GACGC	1 cut(s)	1453
HhaI	GCGC	1 cut(s)	1798
Hin1II	CATG	7 cut(s)	461, 581, 677, 739, 1174, 1534, 1540
Hin6I	GCGC	1 cut(s)	1796
HinP1I	GCGC	1 cut(s)	1796
HincII	GTYRAC	3 cut(s)	490, 1072, 1261
HindII	GTYRAC	3 cut(s)	490, 1072, 1261
HindIII	AAGCTT	1 cut(s)	807
HinfI	GANTC	8 cut(s)	407, 565, 677, 1219, 1262, 1283, 1492, 1597
HpaII	CCGG	3 cut(s)	479, 1392, 1460
HphI	GGTGA	2 cut(s)	100, 517
Hpy166II	GTNNAC	6 cut(s)	91, 490, 978, 1072, 1261, 1312
Hpy188I	TCNGA	9 cut(s)	85, 406, 534, 1118, 1147, 1218, 1344, 1554, 1602
Hpy8I	GTNNAC	6 cut(s)	91, 490, 978, 1072, 1261, 1312
Hpy99I	CGWCG	3 cut(s)	231, 515, 1447
HpyAV	CCTTC	7 cut(s)	185, 760, 915, 961, 1369, 1378, 1597
HpyCH4III	ACNGT	3 cut(s)	1003, 1360, 1636
HpyCH4IV	ACGT	2 cut(s)	1197, 1316
HpyCH4V	TGCA	9 cut(s)	473, 501, 946, 1233, 1398, 1469, 1580, 1748, 1844
HpyF10VI	GCNNNNNNNGC	4 cut(s)	806, 815, 1456, 1850
HpyF3I	CTNAG	5 cut(s)	14, 82, 371, 526, 1854
HpySE526I	ACGT	2 cut(s)	1197, 1316
Hsp92II	CATG	7 cut(s)	461, 581, 677, 739, 1174, 1534, 1540
HspAI	GCGC	1 cut(s)	1796
Ksp22I	TGATCA	1 cut(s)	1533
Kzo9I	GATC	6 cut(s)	20, 507, 529, 1533, 1667, 1885
LmnI	GCTCC	1 cut(s)	769
Lsp1109I	GCAGC	6 cut(s)	732, 802, 805, 1459, 1462, 1760
LweI	GCATC	3 cut(s)	894, 1138, 1456
MaeI	CTAG	8 cut(s)	180, 384, 468, 618, 681, 932, 1557, 1691
MaeII	ACGT	2 cut(s)	1197, 1316
MaeIII	GTNAC	1 cut(s)	1133
MalI	GATC	6 cut(s)	22, 509, 531, 1535, 1669, 1887
MboI	GATC	6 cut(s)	20, 507, 529, 1533, 1667, 1885
MfeI	CAATTG	1 cut(s)	947
MflI	RGATCY	2 cut(s)	20, 1885
MhlI	GDGCHC	1 cut(s)	1187
MlyI	GAGTC	1 cut(s)	1256
MroXI	GAANNNNTTC	2 cut(s)	546, 605
MseI	TTAA	9 cut(s)	804, 897, 1037, 1083, 1322, 1431, 1527, 1736, 1903
MslI	CAYNNNNRTG	1 cut(s)	1535
MspA1I	CMGCKG	1 cut(s)	395
MspI	CCGG	3 cut(s)	479, 1392, 1460
MspR9I	CCNGG	3 cut(s)	479, 663, 721
MunI	CAATTG	1 cut(s)	947
Mva1269I	GAATGC	2 cut(s)	563, 1461
MvaI	CCWGG	2 cut(s)	663, 721
MwoI	GCNNNNNNNGC	4 cut(s)	806, 815, 1456, 1850
NciI	CCSGG	1 cut(s)	479
NcoI	CCATGG	1 cut(s)	735
NdeII	GATC	6 cut(s)	20, 507, 529, 1533, 1667, 1885
NlaIII	CATG	7 cut(s)	461, 581, 677, 739, 1174, 1534, 1540
NlaIV	GGNNCC	3 cut(s)	152, 1185, 1292
NmeAIII	GCCGAG	2 cut(s)	139, 185
NmuCI	GTSAC	1 cut(s)	1133
PagI	TCATGA	2 cut(s)	1170, 1536
PceI	AGGCCT	1 cut(s)	1679
PctI	GAATGC	2 cut(s)	563, 1461
PdmI	GAANNNNTTC	2 cut(s)	546, 605
PfeI	GAWTC	7 cut(s)	407, 565, 677, 1219, 1283, 1492, 1597
PflMI	CCANNNNNTGG	1 cut(s)	583
PinAI	ACCGGT	1 cut(s)	1391
PkrI	GCNGC	9 cut(s)	101, 104, 158, 747, 817, 820, 1449, 1452, 1750
PleI	GAGTC	1 cut(s)	1256
PmaCI	CACGTG	1 cut(s)	1317
PmlI	CACGTG	1 cut(s)	1317
PpsI	GAGTC	1 cut(s)	1256
Ppu21I	YACGTR	1 cut(s)	1317
PshBI	ATTAAT	1 cut(s)	897
PsiI	TTATAA	1 cut(s)	1655
Psp1406I	AACGTT	1 cut(s)	1197
Psp6I	CCWGG	2 cut(s)	661, 719
PspCI	CACGTG	1 cut(s)	1317
PspFI	CCCAGC	2 cut(s)	650, 1725
PspGI	CCWGG	2 cut(s)	661, 719
PspN4I	GGNNCC	3 cut(s)	152, 1185, 1292
PspOMI	GGGCCC	1 cut(s)	1183
PspPI	GGNCC	2 cut(s)	1183, 1184
PsuI	RGATCY	2 cut(s)	20, 1885
RsaI	GTAC	1 cut(s)	1005
RsaNI	GTAC	1 cut(s)	1004
RseI	CAYNNNNRTG	1 cut(s)	1535
SalI	GTCGAC	1 cut(s)	488
SaqAI	TTAA	9 cut(s)	804, 897, 1037, 1083, 1322, 1431, 1527, 1736, 1903
SatI	GCNGC	9 cut(s)	100, 103, 157, 746, 816, 819, 1448, 1451, 1749
Sau3AI	GATC	6 cut(s)	20, 507, 529, 1533, 1667, 1885
Sau96I	GGNCC	2 cut(s)	1183, 1184
SchI	GAGTC	1 cut(s)	1256
ScrFI	CCNGG	3 cut(s)	479, 663, 721
SduI	GDGCHC	1 cut(s)	1187
SfaNI	GCATC	3 cut(s)	894, 1138, 1456
SfcI	CTRYAG	1 cut(s)	1207
SmiI	ATTTAAAT	1 cut(s)	1737
SmiMI	CAYNNNNRTG	1 cut(s)	1535
SmlI	CTYRAG	1 cut(s)	1784
SmoI	CTYRAG	1 cut(s)	1784
SseBI	AGGCCT	1 cut(s)	1679
SspMI	CTAG	8 cut(s)	180, 384, 468, 618, 681, 932, 1557, 1691
StuI	AGGCCT	1 cut(s)	1679
StyD4I	CCNGG	3 cut(s)	477, 661, 719
StyI	CCWWGG	3 cut(s)	735, 822, 1179
SwaI	ATTTAAAT	1 cut(s)	1737
TaaI	ACNGT	3 cut(s)	1003, 1360, 1636
TaiI	ACGT	2 cut(s)	1200, 1319
TaqI	TCGA	6 cut(s)	489, 510, 695, 750, 888, 957
TauI	GCSGC	3 cut(s)	102, 105, 159
TfiI	GAWTC	7 cut(s)	407, 565, 677, 1219, 1283, 1492, 1597
Tru1I	TTAA	9 cut(s)	804, 897, 1037, 1083, 1322, 1431, 1527, 1736, 1903
Tru9I	TTAA	9 cut(s)	804, 897, 1037, 1083, 1322, 1431, 1527, 1736, 1903
TscAI	CASTG	1 cut(s)	1476
TseFI	GTSAC	1 cut(s)	1133
TseI	GCWGC	6 cut(s)	745, 815, 818, 1447, 1450, 1748
Tsp45I	GTSAC	1 cut(s)	1133
TspRI	CASTG	1 cut(s)	1476
Van91I	CCANNNNNTGG	1 cut(s)	583
VspI	ATTAAT	1 cut(s)	897
XapI	RAATTY	4 cut(s)	255, 985, 1033, 1820
XbaI	TCTAGA	1 cut(s)	1690
XmiI	GTMKAC	1 cut(s)	489
XmnI	GAANNNNTTC	2 cut(s)	546, 605
XspI	CTAG	8 cut(s)	180, 384, 468, 618, 681, 932, 1557, 1691

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.