Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0010920

Physical Location & Seq

Genomic Coordinates Forward (+)

70065181 .. 70067591

Gene Structure 2411 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG501200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

ATGTCAGTGTTTCTAAGAAGAAGCAAATTCAGCCAACAGTCCTCGCTGTTTCTCCGCCGCCACTCTCAGTCAGATGTCTGCCTACACCGCCGCTATCGCTCCACCGCCGAGATGGGACGAAGCCCAGGAGGGCAGCAAAAACGAGGTCGCGGAGAACAAGGATTCCGTCCTACTGGTGGCTCTCTGCCCCTGCCTGGTTTGCTTAATTCTCCTCCTCATAGTAATCTCCATTGTTCTCATGGTCAAATTCCGTTTCTTTTGCCACACCCCACTTCACTCTTTACTCTACAAGAAAAAATGCTAGCCTCATCATCATCTTCAATTATCTCAAGTTTCTCAATTTCAATTAAACCCGTTGGTCATTTGCTACCAAATAGGGGTTATTTCCATAGGGGCTTTTCTAGTGTCACCTCTGATGGTGAGGAGGAGGAGGATGGAGGGGTTGAAAATGAGGGTGCTGGTGCTGACCCGGAGGAGGTTGATAGGGTATGTAAGGTGATTGATGAATTGTTTGCATTGGATAGGAATATGGAGGCGGTCCTTGATCAATGTGGTGTTCAATTATCTCATGATTTAGTCGTGGCCGTCTTGAGACGCTTCCACCATGCTAGAAAACCTGCATTTCGGTTTTTCTGTTGGGCTGGGGAGAAGCCAGGTTTTGAGCATGATTCCACGACTTATAACTCCATGATGAGTATTTTAGGGAAGACTAGACAGTTTGAGACTATGGTATCGCTGCTCGAAGAAATGGGAGTCAAAGGACTACTGACAATGGAAACTTTTGTGATTGCTTTCAAAGCTTTTGCTGCCGCCAAAGAGAGGAAGAAAGCTGTTGGAATCTTTGAGCTCATGAAGTATTACAAGTTCAAATATGGTGTCGATACCGTGAATTGCTTGCTTGATACTCTCGGAAGGGCAAAGCTAGGGAAAGAAATGCAAGTTCTTTTTGACAAGTTGAAAGGGAGGTTTACCCCAAATTTACAGACTTATGCGGTGCTGCTTGATGGGTGGTGCAGGGTGAAGAATTTAATGGAGGCGGGGAAGGTCTGGAACGAAATGATTGATAAGGGGTTTAAGCCTGATATTGTTACACATAATATCATGCTTGGAGGTTTGTTGAGGAGTCACAAGAGGTCTGATGCTATCAAATTGTTTGAGATCATGAAAGCCAAGGGTCCATCACCTAATGTTAGAACCTATAGTATTCTGATTCAGAACTTCTGCAAGCAAAAACAGATGAAAGAAGCAATAGACTTTTTTGATGAAATGCGTGAATCTGGGTGCCAGCCAAGTGTTGTGGTTTACACAAGCTTAATCACAGGGTTTGGAAATCAGAACAAGATGGAAATGGTTCATGGATTATTGAAAGCAATGAAGCAAGATGGTTGCACTCCTGATGGGGTGACCTACAATGCCTTGATCAAATTGATGACGAGGCAGAGAATGCCAGATGATGCGGTCAGGATATACAAGAAGATGATTCAAAATGGAGTTGAGCCATCAATACACACCTATGTCATGATAATGAAGTCTTATTTTCAGACAAGAAATTATGACATGGGTCGTGCAGTATGGGATGAGATGATTGAGAAGGGCTGTTGCCCTGATGATAACGCATATACTGTTCTCATTGGAGGTCTAATATGCCAGGGAAGAATGGGGGAGGCCTGCAAATATCTAGAGGAGATGATAGAGAAAGGAATGAAAATTCCTCAGCTTGACTTCAACAAGTTTGCCGCCGACTTCTCCAAAGCTGGGAAACCTGACATACTTGTGGAGATGGCTCAAAAGATGAAGCTCGCTGGTAAGTTTGAACTCTCCAATGTCTTTGCTAGGTGGGCTGAAATGACGAAGAAAAAGATGAAAGGAAGAGATCCTGAAACTAGTGATCAAGGAATCTATTTTACTTCCCATGGATCCATACATGATACTAGGTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

646

Amino Acids

72.96

Weight (kDa)

9.08

Isoelectric Point (pI)

41.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	325 - 373	1.6e-12	PPR repeat family
PPR_3	PF13812	349 - 407	1.9e-09	Pentatricopeptide repeat domain
PPR_2	PF13041	360 - 409	9.9e-15	PPR repeat family
TPR_24	PF23276	383 - 493	9.2e-08	Fungal tetratrico peptide repeats
PPR_3	PF13812	384 - 444	7.6e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	391 - 424	1.6e-10	PPR repeat
PPR	PF01535	399 - 428	8e-08	PPR repeat
PPR_2	PF13041	402 - 443	8.4e-13	PPR repeat family
PPR_3	PF13812	420 - 477	7.1e-13	Pentatricopeptide repeat domain
PPR_2	PF13041	430 - 475	2.4e-12	PPR repeat family
PPR_long	PF17177	446 - 565	3.8e-09	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	454 - 512	1.2e-11	Pentatricopeptide repeat domain
PPR_2	PF13041	465 - 510	2.1e-11	PPR repeat family
PPR	PF01535	468 - 498	5.5e-06	PPR repeat
PPR_3	PF13812	488 - 545	2.1e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	508 - 547	5.3e-07	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0010920)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G62470 AT3G62540 AT5G14820
fragaria_vesca	FvH4_5g39420
malus_domestica	MD11G1315100.v1.1
prunus_persica	Prupe.8G271400_v2.0.a1 Prupe.8G271400_v2.0.a1
pyrus_communis	pycom03g23410 pycom11g27530
rosa_chinensis	RchiOBHm_Chr7g0241731
rosa_laevigata	RLG00000000549
rosa_multiflora	Rmu_co8405791.1_g000001 Rmu_sc0002268.1_g000001
rosa_roxburghii	Rroxscaffold_3G00218720
rosa_rugosa	Rorug07G0346800
rosa_samantha	Rh7AG501200 Rh7BG472500 Rh7CG517500 Rh7DG486200
rosa_wichuraiana	Rw7G042360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	681
Acc36I	ACCTGC	1 cut(s)	625
AccB1I	GGYRCC	1 cut(s)	1281
AccII	CGCG	1 cut(s)	150
AclWI	GGATC	3 cut(s)	1868, 1911, 1924
AcoI	YGGCCR	1 cut(s)	582
AcsI	RAATTY	5 cut(s)	26, 246, 976, 1024, 1707
AfiI	CCNNNNNNNGG	6 cut(s)	176, 194, 377, 475, 819, 1755
AhlI	ACTAGT	1 cut(s)	1883
AjnI	CCWGG	4 cut(s)	124, 193, 652, 1647
AloI	GAACNNNNNNTCC	2 cut(s)	147, 179
AluBI	AGCT	8 cut(s)	800, 830, 847, 922, 1311, 1717, 1754, 1798
AluI	AGCT	8 cut(s)	800, 830, 847, 922, 1311, 1717, 1754, 1798
Alw21I	GWGCWC	1 cut(s)	849
Alw26I	GTCTC	2 cut(s)	586, 716
AlwI	GGATC	3 cut(s)	1868, 1911, 1924
AoxI	GGCC	2 cut(s)	582, 1665
ApeKI	GCWGC	4 cut(s)	133, 736, 806, 997
ApoI	RAATTY	5 cut(s)	26, 246, 976, 1024, 1707
ArsI	GACNNNNNNTTYG	4 cut(s)	130, 162, 861, 893
Asp700I	GAANNNNTTC	1 cut(s)	1350
AspS9I	GGNCC	2 cut(s)	538, 1175
AsuC2I	CCSGG	1 cut(s)	470
AsuHPI	GGTGA	6 cut(s)	400, 431, 508, 1030, 1173, 1414
AsuNHI	GCTAGC	1 cut(s)	301
AvaII	GGWCC	2 cut(s)	538, 1175
BaeI	ACNNNNGTAYC	2 cut(s)	714, 747
BamHI	GGATCC	1 cut(s)	1916
BanI	GGYRCC	1 cut(s)	1281
BanII	GRGCYC	1 cut(s)	849
BbsI	GAAGAC	1 cut(s)	713
Bbv12I	GWGCWC	1 cut(s)	849
BbvCI	CCTCAGC	1 cut(s)	1713
BbvI	GCAGC	4 cut(s)	145, 723, 793, 984
BceAI	ACGGC	1 cut(s)	569
BciT130I	CCWGG	4 cut(s)	126, 195, 654, 1649
BclI	TGATCA	3 cut(s)	544, 1419, 1888
BcnI	CCSGG	1 cut(s)	470
BcoDI	GTCTC	2 cut(s)	586, 716
BcuI	ACTAGT	1 cut(s)	1883
BfaI	CTAG	9 cut(s)	302, 402, 609, 711, 923, 1679, 1833, 1884, 1932
BfmI	CTRYAG	1 cut(s)	1198
BfuAI	ACCTGC	1 cut(s)	625
BisI	GCNGC	8 cut(s)	58, 91, 134, 737, 807, 810, 998, 1737
BlsI	GCNGC	8 cut(s)	59, 92, 135, 738, 808, 811, 999, 1738
Bme1390I	CCNGG	5 cut(s)	126, 195, 470, 654, 1649
Bme18I	GGWCC	2 cut(s)	538, 1175
BmgT120I	GGNCC	2 cut(s)	538, 1175
BmiI	GGNNCC	3 cut(s)	1176, 1283, 1918
BmrFI	CCNGG	5 cut(s)	126, 195, 470, 654, 1649
BmsI	GCATC	2 cut(s)	1129, 1444
BmtI	GCTAGC	1 cut(s)	305
BoxI	GACNNNNGTC	1 cut(s)	1560
BpiI	GAAGAC	1 cut(s)	713
Bpu10I	CCTNAGC	1 cut(s)	1713
BpuEI	CTTGAG	2 cut(s)	313, 610
BpuMI	CCSGG	1 cut(s)	470
BsaJI	CCNNGG	4 cut(s)	124, 1170, 1648, 1912
Bsc4I	CCNNNNNNNGG	6 cut(s)	176, 194, 377, 475, 819, 1755
Bse1I	ACTGG	1 cut(s)	178
Bse3DI	GCAATG	1 cut(s)	1377
BseBI	CCWGG	4 cut(s)	126, 195, 654, 1649
BseDI	CCNNGG	4 cut(s)	124, 1170, 1648, 1912
BseGI	GGATG	2 cut(s)	439, 1582
BseLI	CCNNNNNNNGG	6 cut(s)	176, 194, 377, 475, 819, 1755
BseMI	GCAATG	1 cut(s)	1377
BseMII	CTCAG	2 cut(s)	80, 1727
BseNI	ACTGG	1 cut(s)	178
BseRI	GAGGAG	8 cut(s)	201, 204, 437, 440, 443, 488, 1135, 1697
BseXI	GCAGC	4 cut(s)	145, 723, 793, 984
BseYI	CCCAGC	2 cut(s)	641, 1754
BsgI	GTGCAG	2 cut(s)	1033, 1587
Bsh1236I	CGCG	1 cut(s)	150
BshFI	GGCC	2 cut(s)	584, 1667
BshNI	GGYRCC	1 cut(s)	1281
BsiHKAI	GWGCWC	1 cut(s)	849
BsiSI	CCGG	1 cut(s)	470
BslFI	GGGAC	1 cut(s)	129
BslI	CCNNNNNNNGG	6 cut(s)	176, 194, 377, 475, 819, 1755
BsmAI	GTCTC	2 cut(s)	586, 716
BsmBI	CGTCTC	1 cut(s)	586
BsmFI	GGGAC	1 cut(s)	129
BsmI	GAATGC	1 cut(s)	1449
BsnI	GGCC	2 cut(s)	584, 1667
Bsp1286I	GDGCHC	1 cut(s)	849
Bsp143I	GATC	6 cut(s)	544, 1158, 1419, 1873, 1888, 1916
Bsp19I	CCATGG	1 cut(s)	1912
BspANI	GGCC	2 cut(s)	584, 1667
BspCNI	CTCAG	2 cut(s)	79, 1726
BspFNI	CGCG	1 cut(s)	150
BspHI	TCATGA	4 cut(s)	568, 849, 1161, 1518
BspLI	GGNNCC	3 cut(s)	1176, 1283, 1918
BspMI	ACCTGC	1 cut(s)	625
BspOI	GCTAGC	1 cut(s)	305
BspPI	GGATC	3 cut(s)	1868, 1911, 1924
BspT107I	GGYRCC	1 cut(s)	1281
BsrDI	GCAATG	1 cut(s)	1377
BsrI	ACTGG	1 cut(s)	178
BssECI	CCNNGG	4 cut(s)	124, 1170, 1648, 1912
BssMI	GATC	6 cut(s)	544, 1158, 1419, 1873, 1888, 1916
BssT1I	CCWWGG	2 cut(s)	1170, 1912
Bst2UI	CCWGG	4 cut(s)	126, 195, 654, 1649
Bst4CI	ACNGT	4 cut(s)	39, 717, 886, 1624
Bst6I	CTCTTC	1 cut(s)	1864
BstAPI	GCANNNNNTGC	1 cut(s)	1444
BstC8I	GCNNGC	6 cut(s)	303, 896, 1226, 1286, 1669, 1800
BstDEI	CTNAG	3 cut(s)	14, 66, 1713
BstDSI	CCRYGG	1 cut(s)	1912
BstEII	GGTNACC	1 cut(s)	1402
BstF5I	GGATG	2 cut(s)	439, 1582
BstFNI	CGCG	1 cut(s)	150
BstKTI	GATC	6 cut(s)	547, 1161, 1422, 1876, 1891, 1919
BstMAI	GTCTC	2 cut(s)	586, 716
BstMBI	GATC	6 cut(s)	544, 1158, 1419, 1873, 1888, 1916
BstMWI	GCNNNNNNNGC	8 cut(s)	30, 87, 96, 199, 797, 806, 1444, 1838
BstNI	CCWGG	4 cut(s)	126, 195, 654, 1649
BstPAI	GACNNNNGTC	1 cut(s)	1560
BstPI	GGTNACC	1 cut(s)	1402
BstSCI	CCNGG	5 cut(s)	124, 193, 468, 652, 1647
BstSFI	CTRYAG	1 cut(s)	1198
BstUI	CGCG	1 cut(s)	150
BstV1I	GCAGC	4 cut(s)	145, 723, 793, 984
BstV2I	GAAGAC	1 cut(s)	713
BstX2I	RGATCY	2 cut(s)	1873, 1916
BstYI	RGATCY	2 cut(s)	1873, 1916
BsuRI	GGCC	2 cut(s)	584, 1667
BtgI	CCRYGG	1 cut(s)	1912
BtsCI	GGATG	2 cut(s)	439, 1582
BtsIMutI	CAGTG	1 cut(s)	12
BveI	ACCTGC	1 cut(s)	625
Cac8I	GCNNGC	6 cut(s)	303, 896, 1226, 1286, 1669, 1800
CciI	TCATGA	4 cut(s)	568, 849, 1161, 1518
Cfr13I	GGNCC	2 cut(s)	538, 1175
CseI	GACGC	1 cut(s)	603
CspCI	CAANNNNNGTGG	2 cut(s)	1278, 1313
DdeI	CTNAG	3 cut(s)	14, 66, 1713
DpnI	GATC	6 cut(s)	546, 1160, 1421, 1875, 1890, 1918
DpnII	GATC	6 cut(s)	544, 1158, 1419, 1873, 1888, 1916
EaeI	YGGCCR	1 cut(s)	582
Eam1104I	CTCTTC	1 cut(s)	1864
EarI	CTCTTC	1 cut(s)	1864
EciI	GGCGGA	1 cut(s)	44
Ecl136II	GAGCTC	1 cut(s)	847
Eco130I	CCWWGG	2 cut(s)	1170, 1912
Eco147I	AGGCCT	1 cut(s)	1667
Eco24I	GRGCYC	1 cut(s)	849
Eco47I	GGWCC	2 cut(s)	538, 1175
Eco53kI	GAGCTC	1 cut(s)	847
Eco91I	GGTNACC	1 cut(s)	1402
EcoICRI	GAGCTC	1 cut(s)	847
EcoO65I	GGTNACC	1 cut(s)	1402
EcoRII	CCWGG	4 cut(s)	124, 193, 652, 1647
EcoT14I	CCWWGG	2 cut(s)	1170, 1912
EcoT38I	GRGCYC	1 cut(s)	849
ErhI	CCWWGG	2 cut(s)	1170, 1912
Esp3I	CGTCTC	1 cut(s)	586
FaqI	GGGAC	1 cut(s)	129
FauI	CCCGC	1 cut(s)	1030
FbaI	TGATCA	3 cut(s)	544, 1419, 1888
Fnu4HI	GCNGC	8 cut(s)	58, 91, 134, 737, 807, 810, 998, 1737
FokI	GGATG	2 cut(s)	446, 1589
FriOI	GRGCYC	1 cut(s)	849
Fsp4HI	GCNGC	8 cut(s)	58, 91, 134, 737, 807, 810, 998, 1737
FspBI	CTAG	9 cut(s)	302, 402, 609, 711, 923, 1679, 1833, 1884, 1932
GluI	GCNGC	8 cut(s)	58, 91, 134, 737, 807, 810, 998, 1737
GsaI	CCCAGC	2 cut(s)	645, 1758
HaeIII	GGCC	2 cut(s)	584, 1667
HapII	CCGG	1 cut(s)	470
HgaI	GACGC	1 cut(s)	603
HindIII	AAGCTT	2 cut(s)	798, 1309
HinfI	GANTC	9 cut(s)	162, 668, 753, 837, 1123, 1210, 1274, 1480, 1896
HpaII	CCGG	1 cut(s)	470
HphI	GGTGA	6 cut(s)	400, 431, 508, 1030, 1173, 1414
Hpy166II	GTNNAC	2 cut(s)	969, 1303
Hpy188I	TCNGA	8 cut(s)	73, 415, 911, 1138, 1209, 1215, 1335, 1542
Hpy8I	GTNNAC	2 cut(s)	969, 1303
HpyAV	CCTTC	3 cut(s)	906, 1036, 1585
HpyCH4III	ACNGT	4 cut(s)	39, 717, 886, 1624
HpyCH4V	TGCA	8 cut(s)	515, 620, 937, 1014, 1224, 1389, 1568, 1671
HpyF10VI	GCNNNNNNNGC	8 cut(s)	30, 87, 96, 199, 797, 806, 1444, 1838
HpyF3I	CTNAG	3 cut(s)	14, 66, 1713
Ksp22I	TGATCA	3 cut(s)	544, 1419, 1888
Kzo9I	GATC	6 cut(s)	544, 1158, 1419, 1873, 1888, 1916
LmnI	GCTCC	1 cut(s)	104
Lsp1109I	GCAGC	4 cut(s)	145, 723, 793, 984
LweI	GCATC	2 cut(s)	1129, 1444
MaeI	CTAG	9 cut(s)	302, 402, 609, 711, 923, 1679, 1833, 1884, 1932
MaeIII	GTNAC	4 cut(s)	406, 1087, 1124, 1402
MalI	GATC	6 cut(s)	546, 1160, 1421, 1875, 1890, 1918
MboI	GATC	6 cut(s)	544, 1158, 1419, 1873, 1888, 1916
MflI	RGATCY	2 cut(s)	1873, 1916
MhlI	GDGCHC	1 cut(s)	849
MlyI	GAGTC	2 cut(s)	762, 1132
MmeI	TCCRAC	1 cut(s)	814
MroXI	GAANNNNTTC	1 cut(s)	1350
MseI	TTAA	6 cut(s)	204, 348, 1028, 1074, 1313, 1939
MslI	CAYNNNNRTG	3 cut(s)	1512, 1523, 1772
MspI	CCGG	1 cut(s)	470
MspR9I	CCNGG	5 cut(s)	126, 195, 470, 654, 1649
Mva1269I	GAATGC	1 cut(s)	1449
MvaI	CCWGG	4 cut(s)	126, 195, 654, 1649
MvnI	CGCG	1 cut(s)	150
MwoI	GCNNNNNNNGC	8 cut(s)	30, 87, 96, 199, 797, 806, 1444, 1838
NciI	CCSGG	1 cut(s)	470
NcoI	CCATGG	1 cut(s)	1912
NdeII	GATC	6 cut(s)	544, 1158, 1419, 1873, 1888, 1916
NheI	GCTAGC	1 cut(s)	301
NlaIV	GGNNCC	3 cut(s)	1176, 1283, 1918
NmeAIII	GCCGAG	1 cut(s)	133
NmuCI	GTSAC	3 cut(s)	406, 1124, 1402
PagI	TCATGA	4 cut(s)	568, 849, 1161, 1518
PceI	AGGCCT	1 cut(s)	1667
PctI	GAATGC	1 cut(s)	1449
PdmI	GAANNNNTTC	1 cut(s)	1350
PfeI	GAWTC	7 cut(s)	162, 668, 837, 1210, 1274, 1480, 1896
PkrI	GCNGC	8 cut(s)	59, 92, 135, 738, 808, 811, 999, 1738
PleI	GAGTC	2 cut(s)	761, 1131
PpsI	GAGTC	2 cut(s)	761, 1131
PshAI	GACNNNNGTC	1 cut(s)	1560
PsiI	TTATAA	1 cut(s)	681
Psp124BI	GAGCTC	1 cut(s)	849
Psp6I	CCWGG	4 cut(s)	124, 193, 652, 1647
PspEI	GGTNACC	1 cut(s)	1402
PspFI	CCCAGC	2 cut(s)	641, 1754
PspGI	CCWGG	4 cut(s)	124, 193, 652, 1647
PspN4I	GGNNCC	3 cut(s)	1176, 1283, 1918
PspPI	GGNCC	2 cut(s)	538, 1175
PsrI	GAACNNNNNNTAC	2 cut(s)	848, 880
PsuI	RGATCY	2 cut(s)	1873, 1916
RseI	CAYNNNNRTG	3 cut(s)	1512, 1523, 1772
SacI	GAGCTC	1 cut(s)	849
SaqAI	TTAA	6 cut(s)	204, 348, 1028, 1074, 1313, 1939
SatI	GCNGC	8 cut(s)	58, 91, 134, 737, 807, 810, 998, 1737
Sau3AI	GATC	6 cut(s)	544, 1158, 1419, 1873, 1888, 1916
Sau96I	GGNCC	2 cut(s)	538, 1175
SchI	GAGTC	2 cut(s)	762, 1132
ScrFI	CCNGG	5 cut(s)	126, 195, 470, 654, 1649
SduI	GDGCHC	1 cut(s)	849
SfaNI	GCATC	2 cut(s)	1129, 1444
SfcI	CTRYAG	1 cut(s)	1198
SinI	GGWCC	2 cut(s)	538, 1175
SmiMI	CAYNNNNRTG	3 cut(s)	1512, 1523, 1772
SmlI	CTYRAG	2 cut(s)	328, 589
SmoI	CTYRAG	2 cut(s)	328, 589
SpeI	ACTAGT	1 cut(s)	1883
SseBI	AGGCCT	1 cut(s)	1667
SspMI	CTAG	9 cut(s)	302, 402, 609, 711, 923, 1679, 1833, 1884, 1932
SstI	GAGCTC	1 cut(s)	849
StuI	AGGCCT	1 cut(s)	1667
StyD4I	CCNGG	5 cut(s)	124, 193, 468, 652, 1647
StyI	CCWWGG	2 cut(s)	1170, 1912
TaaI	ACNGT	4 cut(s)	39, 717, 886, 1624
TaqI	TCGA	2 cut(s)	741, 879
TauI	GCSGC	4 cut(s)	60, 93, 812, 1739
TfiI	GAWTC	7 cut(s)	162, 668, 837, 1210, 1274, 1480, 1896
Tru1I	TTAA	6 cut(s)	204, 348, 1028, 1074, 1313, 1939
Tru9I	TTAA	6 cut(s)	204, 348, 1028, 1074, 1313, 1939
TscAI	CASTG	1 cut(s)	12
TseFI	GTSAC	3 cut(s)	406, 1124, 1402
TseI	GCWGC	4 cut(s)	133, 736, 806, 997
Tsp45I	GTSAC	3 cut(s)	406, 1124, 1402
TspGWI	ACGGA	2 cut(s)	155, 240
TspRI	CASTG	1 cut(s)	12
VpaK11BI	GGWCC	2 cut(s)	538, 1175
XapI	RAATTY	5 cut(s)	26, 246, 976, 1024, 1707
XbaI	TCTAGA	1 cut(s)	1678
XcmI	CCANNNNNNNNNTGG	2 cut(s)	109, 236
XmnI	GAANNNNTTC	1 cut(s)	1350
XspI	CTAG	9 cut(s)	302, 402, 609, 711, 923, 1679, 1833, 1884, 1932

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.