Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0010920

Physical Location & Seq

Genomic Coordinates Reverse (-)

1011040 .. 1013660

Gene Structure 2621 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00218720.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1950 bp

ATGTCAGTGTTTCTAAGAAGAAGCAAATTCAGCCACCAAATATACCCGCTGCTTCTCCGCCGCCACTCTCAGTCGGATGTCTACCTACACCGCCGCTATCGCTCCGCCGCCGAGATGGGACGAAGCCCAGGAGGGCAGCAAAAACAAGGATTCCGTCCTACTGGTGGCTCTCTGCCCCTGCCTGGTTTGCTTAATTCTCCTCCTCATAGTAATCTCCATTGTTCTCATGGTCAAATTCCATTTCTTTTGCCACACCCCACTTCACTCTTTACTCTACAACAAAAAATGCTAGCATCATCATCTTCAATTATCTCAAGTTTCTCAATTTCAATTAAACCCGTTGGTCATTTGCTACCAAATAGGGGCTTTTCTAGTGTCACCTCTGATGGTGAGGAGGAGGAGGAGGAGGAGGAGGATGGAGGGTTTGAAAATGAGGATGTTAGTGAGGATGTTAGTGTTAGTTCTGGTGCTGACCCTGAGGAGGTTGATAGGGTATGTAAGGTGATTGATGAATTGTTTGCATTGGATAGGAATATGGAGGCGGTTCTCGATCAATGTGGTGTTCAATTATCCCATGATTTAGTTGTGGCCGTCTTGAGACGCTTCCACCATGCTAGAAAACCTGCATTTCGGTTTTTCTGTTGGGCTGGGGACAAGCCAGGTTTTGAGCATGATTCCACGACTTATAACTCTATGATGAGTATTTTAGGGAAGACTAGACAGTTTGAGACTATGGTATCGCTGCTCGAAGAAATGGGAGTCAAAGGACTACTGACAATGGAAACTTTTGTGATTGCTTTCAAAGCTTTTGCTGCCGCCAAAGAGAGGAAGAAAGCTGTTGGAATTTTTGAGCTCATGAAGTATTACAAGTTCAAATATGGTGTCGATACCGTGAATTGCTTGCTTGATACTCTCGGAAGGGCAAAGCTAGGGAAAGAAATGCAAGTTCTTTTTGACAAGTTGAAAGGGAGGTTTACCCCAAATTTACAGACTTATGCGGTGCTGCTTGATGGGTGGTGCAGGGTGAAGAATTTAATGGAGGCAGGGCAGGTCTGGAACGAGATGATTGATAAGGGGTTTAAGCCTGATATTGTAACACATAATATCATGCTTGGAGGTTTGTTGAGGAGTCACAAGAGGTCTGATGCTATCAAATTGTTTGAGATCATGAAAGCCAAGGGTCCATCACCTAATGTTAGAACCTATAGTATTCTGATTCAGAACTTCTGCAAGCAAAAACAGATGAAAGAAGCAATAGACTTTTTTGATGAAATGCGTGAATCTGGGTGCCAGCCAAGTGTTGTGGTTTACACAAGCTTAATCACAGGGTTTGGAAATCAGAACAAGATGGATATGGTTCATGGATTATTGAAAGCAATGAAGCAAGATGGTTGCACTCCTGATGGGGTGACCTACAATGCCTTGATCAAATTGATGACGAGGCAGAGAATGCCAGATGATGCGGTCAGGATATACAAGAAGATGATTCAAAATGGAGTTGAGCCATCAATACACACCTATGTCATGATAATGAAGTCTTATTTTCAGACAAGAAATTATGACATGGGTCGTGCAGTATGGGATGAGATGATTGAGAAGGGCTGCTGCCCAGATGATAACGCATATACTGTTCTCATTGGAGGTCTTATATGCCAGGGAAGAACGGGGGAGGCCTGCAAATATCTAGAGGAAATGATAGAGAAAGGAATGAAAATTCCTCAGCTTGACTTCAACAAGTTTGCCGCCGACTTCTCCAGTGCTGGGAAACCTGACATACTTGTGGAGATGGCTCAAAAGATGAAGCTCGCTGGTAAGTTTGAACTCTCCAATGTCTTTGCTAGGTGGGCTGAAATGACGAAGAAAGAGATGAAAGGAAGAGATCCTGACGAAACTAGTGATCAAGGAATCTATTTTACTTCCCATGGATCCATACATGATACTAGGTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

649

Amino Acids

73.32

Weight (kDa)

8.09

Isoelectric Point (pI)

42.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	327 - 375	3e-12	PPR repeat family
PPR_3	PF13812	351 - 409	2.4e-09	Pentatricopeptide repeat domain
PPR_2	PF13041	363 - 411	7.8e-14	PPR repeat family
TPR_24	PF23276	384 - 495	3.7e-08	Fungal tetratrico peptide repeats
PPR_3	PF13812	386 - 446	7.6e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	393 - 426	1.6e-10	PPR repeat
PPR	PF01535	401 - 430	8.1e-08	PPR repeat
PPR_2	PF13041	404 - 445	8.5e-13	PPR repeat family
PPR_3	PF13812	422 - 479	7.3e-13	Pentatricopeptide repeat domain
PPR_2	PF13041	432 - 477	3.1e-12	PPR repeat family
PPR_long	PF17177	448 - 567	1.8e-09	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	456 - 514	1.3e-11	Pentatricopeptide repeat domain
PPR_2	PF13041	467 - 514	9.7e-12	PPR repeat family
PPR	PF01535	470 - 500	5.5e-06	PPR repeat
PPR_3	PF13812	490 - 547	2e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	504 - 549	1.7e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0010920)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G62470 AT3G62540 AT5G14820
fragaria_vesca	FvH4_5g39420
malus_domestica	MD11G1315100.v1.1
prunus_persica	Prupe.8G271400_v2.0.a1 Prupe.8G271400_v2.0.a1
pyrus_communis	pycom03g23410 pycom11g27530
rosa_chinensis	RchiOBHm_Chr7g0241731
rosa_laevigata	RLG00000000549
rosa_multiflora	Rmu_co8405791.1_g000001 Rmu_sc0002268.1_g000001
rosa_roxburghii	Rroxscaffold_3G00218720
rosa_rugosa	Rorug07G0346800
rosa_samantha	Rh7AG501200 Rh7BG472500 Rh7CG517500 Rh7DG486200
rosa_wichuraiana	Rw7G042360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	687
Acc36I	ACCTGC	2 cut(s)	631, 1039
AccB1I	GGYRCC	1 cut(s)	1287
AccI	GTMKAC	1 cut(s)	81
AclWI	GGATC	3 cut(s)	1874, 1920, 1933
AcoI	YGGCCR	1 cut(s)	588
AcsI	RAATTY	6 cut(s)	26, 234, 843, 982, 1030, 1713
AfiI	CCNNNNNNNGG	6 cut(s)	164, 182, 362, 481, 825, 1761
AhlI	ACTAGT	1 cut(s)	1892
AjnI	CCWGG	4 cut(s)	127, 181, 658, 1653
AluBI	AGCT	7 cut(s)	806, 836, 853, 928, 1317, 1723, 1804
AluI	AGCT	7 cut(s)	806, 836, 853, 928, 1317, 1723, 1804
Alw21I	GWGCWC	1 cut(s)	855
Alw26I	GTCTC	2 cut(s)	592, 722
AlwI	GGATC	3 cut(s)	1874, 1920, 1933
AoxI	GGCC	2 cut(s)	588, 1671
ApeKI	GCWGC	7 cut(s)	49, 136, 742, 812, 1003, 1602, 1605
ApoI	RAATTY	6 cut(s)	26, 234, 843, 982, 1030, 1713
ArsI	GACNNNNNNTTYG	2 cut(s)	867, 899
AspS9I	GGNCC	1 cut(s)	1181
AsuHPI	GGTGA	6 cut(s)	370, 401, 514, 1036, 1179, 1420
AsuNHI	GCTAGC	1 cut(s)	289
AvaII	GGWCC	1 cut(s)	1181
AxyI	CCTNAGG	1 cut(s)	477
BaeI	ACNNNNGTAYC	2 cut(s)	720, 753
BamHI	GGATCC	1 cut(s)	1925
BanI	GGYRCC	1 cut(s)	1287
BanII	GRGCYC	1 cut(s)	855
BbsI	GAAGAC	1 cut(s)	719
Bbv12I	GWGCWC	1 cut(s)	855
BbvCI	CCTCAGC	1 cut(s)	1719
BbvI	GCAGC	7 cut(s)	36, 148, 729, 799, 990, 1589, 1592
BceAI	ACGGC	1 cut(s)	575
BciT130I	CCWGG	4 cut(s)	129, 183, 660, 1655
BclI	TGATCA	2 cut(s)	1425, 1897
BcoDI	GTCTC	2 cut(s)	592, 722
BcuI	ACTAGT	1 cut(s)	1892
BfaI	CTAG	9 cut(s)	290, 372, 615, 717, 929, 1685, 1839, 1893, 1941
BfmI	CTRYAG	1 cut(s)	1204
BfuAI	ACCTGC	2 cut(s)	631, 1039
Bme1390I	CCNGG	4 cut(s)	129, 183, 660, 1655
Bme18I	GGWCC	1 cut(s)	1181
BmgT120I	GGNCC	1 cut(s)	1181
BmiI	GGNNCC	3 cut(s)	1182, 1289, 1927
BmrFI	CCNGG	4 cut(s)	129, 183, 660, 1655
BmsI	GCATC	3 cut(s)	302, 1135, 1450
BmtI	GCTAGC	1 cut(s)	293
BoxI	GACNNNNGTC	1 cut(s)	1566
BpiI	GAAGAC	1 cut(s)	719
BpmI	CTGGAG	1 cut(s)	1738
Bpu10I	CCTNAGC	1 cut(s)	1719
BpuEI	CTTGAG	2 cut(s)	298, 616
BsaJI	CCNNGG	4 cut(s)	127, 1176, 1654, 1921
Bsc4I	CCNNNNNNNGG	6 cut(s)	164, 182, 362, 481, 825, 1761
Bse1I	ACTGG	2 cut(s)	166, 1755
Bse21I	CCTNAGG	1 cut(s)	477
Bse3DI	GCAATG	1 cut(s)	1383
BseBI	CCWGG	4 cut(s)	129, 183, 660, 1655
BseDI	CCNNGG	4 cut(s)	127, 1176, 1654, 1921
BseGI	GGATG	5 cut(s)	82, 421, 442, 454, 1588
BseLI	CCNNNNNNNGG	6 cut(s)	164, 182, 362, 481, 825, 1761
BseMI	GCAATG	1 cut(s)	1383
BseMII	CTCAG	3 cut(s)	83, 468, 1733
BseNI	ACTGG	2 cut(s)	166, 1755
BseXI	GCAGC	7 cut(s)	36, 148, 729, 799, 990, 1589, 1592
BseYI	CCCAGC	2 cut(s)	647, 1760
BsgI	GTGCAG	2 cut(s)	1039, 1593
BshFI	GGCC	2 cut(s)	590, 1673
BshNI	GGYRCC	1 cut(s)	1287
BsiHKAI	GWGCWC	1 cut(s)	855
BslFI	GGGAC	2 cut(s)	132, 665
BslI	CCNNNNNNNGG	6 cut(s)	164, 182, 362, 481, 825, 1761
BsmAI	GTCTC	2 cut(s)	592, 722
BsmBI	CGTCTC	1 cut(s)	592
BsmFI	GGGAC	2 cut(s)	132, 665
BsmI	GAATGC	1 cut(s)	1455
BsnI	GGCC	2 cut(s)	590, 1673
Bsp1286I	GDGCHC	1 cut(s)	855
Bsp143I	GATC	6 cut(s)	550, 1164, 1425, 1879, 1897, 1925
Bsp19I	CCATGG	1 cut(s)	1921
BspANI	GGCC	2 cut(s)	590, 1673
BspCNI	CTCAG	3 cut(s)	82, 469, 1732
BspHI	TCATGA	3 cut(s)	855, 1167, 1524
BspLI	GGNNCC	3 cut(s)	1182, 1289, 1927
BspMI	ACCTGC	2 cut(s)	631, 1039
BspOI	GCTAGC	1 cut(s)	293
BspPI	GGATC	3 cut(s)	1874, 1920, 1933
BspT107I	GGYRCC	1 cut(s)	1287
BsrDI	GCAATG	1 cut(s)	1383
BsrI	ACTGG	2 cut(s)	166, 1755
BssECI	CCNNGG	4 cut(s)	127, 1176, 1654, 1921
BssMI	GATC	6 cut(s)	550, 1164, 1425, 1879, 1897, 1925
BssT1I	CCWWGG	2 cut(s)	1176, 1921
Bst2UI	CCWGG	4 cut(s)	129, 183, 660, 1655
Bst4CI	ACNGT	3 cut(s)	723, 892, 1630
Bst6I	CTCTTC	1 cut(s)	1870
BstAPI	GCANNNNNTGC	1 cut(s)	1450
BstC8I	GCNNGC	6 cut(s)	291, 902, 1232, 1292, 1675, 1806
BstDEI	CTNAG	4 cut(s)	14, 69, 477, 1719
BstDSI	CCRYGG	1 cut(s)	1921
BstEII	GGTNACC	1 cut(s)	1408
BstF5I	GGATG	5 cut(s)	82, 421, 442, 454, 1588
BstKTI	GATC	6 cut(s)	553, 1167, 1428, 1882, 1900, 1928
BstMAI	GTCTC	2 cut(s)	592, 722
BstMBI	GATC	6 cut(s)	550, 1164, 1425, 1879, 1897, 1925
BstMWI	GCNNNNNNNGC	7 cut(s)	30, 99, 187, 803, 812, 1450, 1844
BstNI	CCWGG	4 cut(s)	129, 183, 660, 1655
BstPAI	GACNNNNGTC	1 cut(s)	1566
BstPI	GGTNACC	1 cut(s)	1408
BstSCI	CCNGG	4 cut(s)	127, 181, 658, 1653
BstSFI	CTRYAG	1 cut(s)	1204
BstV1I	GCAGC	7 cut(s)	36, 148, 729, 799, 990, 1589, 1592
BstV2I	GAAGAC	1 cut(s)	719
BstX2I	RGATCY	2 cut(s)	1879, 1925
BstYI	RGATCY	2 cut(s)	1879, 1925
Bsu36I	CCTNAGG	1 cut(s)	477
BsuRI	GGCC	2 cut(s)	590, 1673
BtgI	CCRYGG	1 cut(s)	1921
BtsCI	GGATG	5 cut(s)	82, 421, 442, 454, 1588
BtsIMutI	CAGTG	2 cut(s)	12, 1762
BveI	ACCTGC	2 cut(s)	631, 1039
Cac8I	GCNNGC	6 cut(s)	291, 902, 1232, 1292, 1675, 1806
CciI	TCATGA	3 cut(s)	855, 1167, 1524
Cfr13I	GGNCC	1 cut(s)	1181
CseI	GACGC	1 cut(s)	609
CspCI	CAANNNNNGTGG	2 cut(s)	1284, 1319
DdeI	CTNAG	4 cut(s)	14, 69, 477, 1719
DpnI	GATC	6 cut(s)	552, 1166, 1427, 1881, 1899, 1927
DpnII	GATC	6 cut(s)	550, 1164, 1425, 1879, 1897, 1925
EaeI	YGGCCR	1 cut(s)	588
Eam1104I	CTCTTC	1 cut(s)	1870
EarI	CTCTTC	1 cut(s)	1870
EciI	GGCGGA	2 cut(s)	47, 94
Ecl136II	GAGCTC	1 cut(s)	853
Eco130I	CCWWGG	2 cut(s)	1176, 1921
Eco147I	AGGCCT	1 cut(s)	1673
Eco24I	GRGCYC	1 cut(s)	855
Eco47I	GGWCC	1 cut(s)	1181
Eco53kI	GAGCTC	1 cut(s)	853
Eco81I	CCTNAGG	1 cut(s)	477
Eco91I	GGTNACC	1 cut(s)	1408
EcoICRI	GAGCTC	1 cut(s)	853
EcoO65I	GGTNACC	1 cut(s)	1408
EcoRII	CCWGG	4 cut(s)	127, 181, 658, 1653
EcoT14I	CCWWGG	2 cut(s)	1176, 1921
EcoT38I	GRGCYC	1 cut(s)	855
ErhI	CCWWGG	2 cut(s)	1176, 1921
Esp3I	CGTCTC	1 cut(s)	592
FaqI	GGGAC	2 cut(s)	132, 665
FauI	CCCGC	1 cut(s)	54
FbaI	TGATCA	2 cut(s)	1425, 1897
FblI	GTMKAC	1 cut(s)	81
FokI	GGATG	5 cut(s)	89, 428, 449, 461, 1595
FriOI	GRGCYC	1 cut(s)	855
FspBI	CTAG	9 cut(s)	290, 372, 615, 717, 929, 1685, 1839, 1893, 1941
GsaI	CCCAGC	2 cut(s)	651, 1764
GsuI	CTGGAG	1 cut(s)	1738
HaeIII	GGCC	2 cut(s)	590, 1673
HgaI	GACGC	1 cut(s)	609
HindIII	AAGCTT	2 cut(s)	804, 1315
HinfI	GANTC	8 cut(s)	150, 674, 759, 1129, 1216, 1280, 1486, 1905
HphI	GGTGA	6 cut(s)	370, 401, 514, 1036, 1179, 1420
Hpy166II	GTNNAC	3 cut(s)	82, 975, 1309
Hpy188I	TCNGA	8 cut(s)	76, 385, 917, 1144, 1215, 1221, 1341, 1548
Hpy8I	GTNNAC	3 cut(s)	82, 975, 1309
HpyAV	CCTTC	2 cut(s)	912, 1591
HpyCH4III	ACNGT	3 cut(s)	723, 892, 1630
HpyCH4V	TGCA	8 cut(s)	521, 626, 943, 1020, 1230, 1395, 1574, 1677
HpyF10VI	GCNNNNNNNGC	7 cut(s)	30, 99, 187, 803, 812, 1450, 1844
HpyF3I	CTNAG	4 cut(s)	14, 69, 477, 1719
Ksp22I	TGATCA	2 cut(s)	1425, 1897
Kzo9I	GATC	6 cut(s)	550, 1164, 1425, 1879, 1897, 1925
LmnI	GCTCC	1 cut(s)	107
Lsp1109I	GCAGC	7 cut(s)	36, 148, 729, 799, 990, 1589, 1592
LweI	GCATC	3 cut(s)	302, 1135, 1450
MaeI	CTAG	9 cut(s)	290, 372, 615, 717, 929, 1685, 1839, 1893, 1941
MaeIII	GTNAC	4 cut(s)	376, 1093, 1130, 1408
MalI	GATC	6 cut(s)	552, 1166, 1427, 1881, 1899, 1927
MboI	GATC	6 cut(s)	550, 1164, 1425, 1879, 1897, 1925
MflI	RGATCY	2 cut(s)	1879, 1925
MhlI	GDGCHC	1 cut(s)	855
MlyI	GAGTC	2 cut(s)	768, 1138
MmeI	TCCRAC	2 cut(s)	54, 820
MseI	TTAA	6 cut(s)	192, 333, 1034, 1080, 1319, 1948
MslI	CAYNNNNRTG	3 cut(s)	1518, 1529, 1778
MspA1I	CMGCKG	1 cut(s)	49
MspR9I	CCNGG	4 cut(s)	129, 183, 660, 1655
Mva1269I	GAATGC	1 cut(s)	1455
MvaI	CCWGG	4 cut(s)	129, 183, 660, 1655
MwoI	GCNNNNNNNGC	7 cut(s)	30, 99, 187, 803, 812, 1450, 1844
NcoI	CCATGG	1 cut(s)	1921
NdeII	GATC	6 cut(s)	550, 1164, 1425, 1879, 1897, 1925
NheI	GCTAGC	1 cut(s)	289
NlaIV	GGNNCC	3 cut(s)	1182, 1289, 1927
NmeAIII	GCCGAG	1 cut(s)	136
NmuCI	GTSAC	3 cut(s)	376, 1130, 1408
PagI	TCATGA	3 cut(s)	855, 1167, 1524
PceI	AGGCCT	1 cut(s)	1673
PctI	GAATGC	1 cut(s)	1455
PfeI	GAWTC	6 cut(s)	150, 674, 1216, 1280, 1486, 1905
PleI	GAGTC	2 cut(s)	767, 1137
PpsI	GAGTC	2 cut(s)	767, 1137
PshAI	GACNNNNGTC	1 cut(s)	1566
PsiI	TTATAA	1 cut(s)	687
Psp124BI	GAGCTC	1 cut(s)	855
Psp6I	CCWGG	4 cut(s)	127, 181, 658, 1653
PspEI	GGTNACC	1 cut(s)	1408
PspFI	CCCAGC	2 cut(s)	647, 1760
PspGI	CCWGG	4 cut(s)	127, 181, 658, 1653
PspN4I	GGNNCC	3 cut(s)	1182, 1289, 1927
PspPI	GGNCC	1 cut(s)	1181
PsrI	GAACNNNNNNTAC	2 cut(s)	854, 886
PsuI	RGATCY	2 cut(s)	1879, 1925
RseI	CAYNNNNRTG	3 cut(s)	1518, 1529, 1778
SacI	GAGCTC	1 cut(s)	855
SaqAI	TTAA	6 cut(s)	192, 333, 1034, 1080, 1319, 1948
Sau3AI	GATC	6 cut(s)	550, 1164, 1425, 1879, 1897, 1925
Sau96I	GGNCC	1 cut(s)	1181
SchI	GAGTC	2 cut(s)	768, 1138
ScrFI	CCNGG	4 cut(s)	129, 183, 660, 1655
SduI	GDGCHC	1 cut(s)	855
SfaNI	GCATC	3 cut(s)	302, 1135, 1450
SfcI	CTRYAG	1 cut(s)	1204
SinI	GGWCC	1 cut(s)	1181
SmiMI	CAYNNNNRTG	3 cut(s)	1518, 1529, 1778
SmlI	CTYRAG	2 cut(s)	313, 595
SmoI	CTYRAG	2 cut(s)	313, 595
SpeI	ACTAGT	1 cut(s)	1892
SseBI	AGGCCT	1 cut(s)	1673
SspMI	CTAG	9 cut(s)	290, 372, 615, 717, 929, 1685, 1839, 1893, 1941
SstI	GAGCTC	1 cut(s)	855
StuI	AGGCCT	1 cut(s)	1673
StyD4I	CCNGG	4 cut(s)	127, 181, 658, 1653
StyI	CCWWGG	2 cut(s)	1176, 1921
TaaI	ACNGT	3 cut(s)	723, 892, 1630
TaqI	TCGA	3 cut(s)	549, 747, 885
TauI	GCSGC	5 cut(s)	63, 96, 110, 818, 1745
TfiI	GAWTC	6 cut(s)	150, 674, 1216, 1280, 1486, 1905
Tru1I	TTAA	6 cut(s)	192, 333, 1034, 1080, 1319, 1948
Tru9I	TTAA	6 cut(s)	192, 333, 1034, 1080, 1319, 1948
TscAI	CASTG	2 cut(s)	12, 1762
TseFI	GTSAC	3 cut(s)	376, 1130, 1408
TseI	GCWGC	7 cut(s)	49, 136, 742, 812, 1003, 1602, 1605
Tsp45I	GTSAC	3 cut(s)	376, 1130, 1408
TspGWI	ACGGA	1 cut(s)	143
TspRI	CASTG	2 cut(s)	12, 1762
VpaK11BI	GGWCC	1 cut(s)	1181
XapI	RAATTY	6 cut(s)	26, 234, 843, 982, 1030, 1713
XbaI	TCTAGA	1 cut(s)	1684
XcmI	CCANNNNNNNNNTGG	1 cut(s)	224
XmiI	GTMKAC	1 cut(s)	81
XspI	CTAG	9 cut(s)	290, 372, 615, 717, 929, 1685, 1839, 1893, 1941

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.