MD12G1059100.v1.1
MYB Family

Bromodomain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
OG0009263
Physical Location & Seq
Reverse (-)
6884632 .. 6889366
4735 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1059100.v1.1.491

Sequence Viewer

Length: 2022 bp
ATGGATAACAAGTCCCCTAATTTTCCCGAGAAACAAACACCGACATGGGGGACGTGGGAGGAGCTCCTCCTCGCCTGCGCCGTCCACCGCTTCGGCACCCAGAGCTGGGACTCCGTCGCCACCGAACTCCGCAAGCGCAGTTCCAACCTCCACCTCCTCACCCCGCACGCCTGCAAGCGCAAGTTCCACGACCTCCGCCGCCACTTTAACCACTCCGATAACGTGTCCGCCGCCAGCAACGACGATAAATCCCCCATCCCCTGGCTCCACCAGTTGCGGCAGCGGCGGCTCGACGAACTTCGACGCGAACTGCAACGTTACGACCGCTCCATCGTGTGTTTGCAATCGAAGGTGGACAGGTTGAAAGAAGTGCGCGAACATAGTCTGAGGGAGACCCAAAAACCGGTAGAAAAATCGGATCTAGAGAAAACCGGAGACGAAGAGATTAAACCGGATGATGTCTCGCCGGAGAAAAAAGAAATCTCCAGCGATTTCTTGGTGCACGACGGCCAGTCGTTTGACGAGTCGAACACGACAGATCGGAAACCCGAGGAACCCGGCACCGGATATGCCGGTACGGGTAATGGTTCGGAGCCGAATAAATCGGTTGAACCAGCCGGTGAGGAGATCGGGTCGGCCGAGAAGTCGAGTAATCCGGCGGTGGAGGATTCGTGCAACGGAAGTTCCGATTCGGTGGCGAAAGAACCGGCGGGTCAAAGGGAATCGATGGCCGAGTCAAAGGGAGTCGCAGAAGGGACGAAGGAGAGTCGTCAAAGTAGCAGTGAAGTGAAGAGCTCGGTGAGATTGTCGAGAAAAGCAGGGAATGATCCGGAACCGGTCGGACCGGGAGAGCCAAGTGAACCGGAGCAGGAGGATGAATCTCCCGCCACGAAGAGGGTCCCAGTTGAATCTCAGCCGTTGGTGGATTTCCTCGAGATCCTTCGCTCTCATAAGTTTGCCTCCTTATTCGGGCGCCGGCTCCATTCCCAGGATAACCCAATTTATACAAAAATGATCCGGCAACATGTAGATTTCGAAATGGTGCAAACCAGACTTGAAGGAGGTTGGTACTCGCATTGCAGCAGAATGTTATTCTTTCGAGATCTGTTGATTATTTGCAACAATGCCATAGTCTTCTTTGGGAAAATGTCTCCAGAATACAAGGCTGCGTGTGAGCTTCGGTCCCTTTTGTCAAAGGAAATGGCTCGTCTGGCTCCTAAACAAGATGCACCTCCCGAAGAAGAAATTCTGACACAACCAGCTCCACCTCTGAATCCCGATCCTGAAACTTCAGATTCGTTGCTAGCAAAATCAAAACTCTCACTTCCATTGAATGCTTGTCGCAAGCGCAGCTCCATTGCTGCAAGAGGATCCACATCTTCTTCGGGACCAGACACAAGAAAAGAGCAGGCCACTCGTGATGTCAAACCAGCTGTAAATTGGAAACAAAAGGAAGTGTCCTTGGATGAAATTGAGAAACTCCGTGTCACTAAGAAGAGAAGAAAAGAAAGACTTGGGAGCAGTACAAGAAACAACACGAGCAAAAATGTCAGGACCCGTAGTTATTCTAACAATGACAGAAGTTCAGATGCCAATGAGAATTCAGAGTCCAAATCTGAGACGGAAAAGAAGAGCAGAGTGGTATCTAGCAATGAGAATTCAGAAACCAAAGCAGAGATGGAAAAGAAGAGAAACAATAACGCAAGTGGGAAAAAGCAAAGTGCCACAAATTTCTTGAGTAGAATGAAGAGCTCCTCGTCCAAAACCGGATCATTGCTAGAGACATCAAAGAACCCTGAGAATAACAGCAAAGGGAGAAGAGCAGAGCAGAGGAAAAATGGAAATGGCAAAGGAAACACGCAGAAAGATCAAGGTTCGCGCAGAAGTTCTGGTGGGAGACAAGCGGCAAAAGAGCAAGAAAGCCCATCGAAAAGGAGTGTGGGACGGCCCTCAAAGAGGGCGGCAGCAGTGGCACCAACAACAGCTGGTCCAGCTAAACGAGCTAGAGGCCGAGGAAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Bromodomain Myb_DNA-binding

Protein Analysis

674

Amino Acids

74.95

Weight (kDa)

9.4

Isoelectric Point (pI)

69.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Bromodomain PF00439 314 - 391 1.6e-07 Bromodomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 4 cut(s) 95, 560, 972, 1972
AccB7I CCANNNNNTGG 1 cut(s) 261
AccBSI CCGCTC 1 cut(s) 327
AccII CGCG 3 cut(s) 306, 375, 1879
AccIII TCCGGA 1 cut(s) 829
AclI AACGTT 1 cut(s) 316
AclWI GGATC 8 cut(s) 426, 821, 931, 1009, 1274, 1365, 1378, 1777
AcoI YGGCCR 3 cut(s) 508, 636, 729
AcsI RAATTY 4 cut(s) 1245, 1600, 1657, 1729
AcuI CTGAAG 1 cut(s) 1275
AcyI GRCGYC 1 cut(s) 973
AfaI GTAC 3 cut(s) 577, 1070, 1525
AflIII ACRYGT 2 cut(s) 222, 1024
AgeI ACCGGT 2 cut(s) 403, 835
AgsI TTSAA 5 cut(s) 364, 611, 908, 1058, 1333
AhdI GACNNNNNGTC 1 cut(s) 511
AjiI CACGTC 1 cut(s) 54
AjnI CCWGG 2 cut(s) 260, 987
Alw21I GWGCWC 4 cut(s) 66, 504, 797, 1754
Alw26I GTCTC 7 cut(s) 386, 429, 466, 1155, 1613, 1775, 1891
Alw44I GTGCAC 1 cut(s) 500
AlwI GGATC 8 cut(s) 426, 821, 931, 1009, 1274, 1365, 1378, 1777
Ama87I CYCGRG 3 cut(s) 26, 548, 932
Aor13HI TCCGGA 1 cut(s) 829
AoxI GGCC 6 cut(s) 508, 636, 729, 1410, 1946, 2008
ApaLI GTGCAC 1 cut(s) 500
ApeKI GCWGC 6 cut(s) 280, 1080, 1166, 1350, 1361, 1964
ApoI RAATTY 4 cut(s) 1245, 1600, 1657, 1729
AsiGI ACCGGT 2 cut(s) 403, 835
Asp700I GAANNNNTTC 1 cut(s) 1245
AspLEI GCGC 7 cut(s) 80, 138, 180, 375, 975, 1350, 1881
AspS9I GGNCC 7 cut(s) 842, 898, 1182, 1388, 1554, 1947, 1988
AsuC2I CCSGG 2 cut(s) 558, 846
AsuHPI GGTGA 3 cut(s) 151, 632, 811
AsuII TTCGAA 1 cut(s) 1035
AsuNHI GCTAGC 1 cut(s) 1303
AvaI CYCGRG 3 cut(s) 26, 548, 932
AvaII GGWCC 6 cut(s) 842, 898, 1182, 1388, 1554, 1988
BaeGI GKGCMC 1 cut(s) 504
BamHI GGATCC 1 cut(s) 1370
BanI GGYRCC 4 cut(s) 95, 560, 972, 1972
BanII GRGCYC 3 cut(s) 66, 797, 1754
BauI CACGAG 2 cut(s) 1416, 1537
BbsI GAAGAC 1 cut(s) 1126
Bbv12I GWGCWC 4 cut(s) 66, 504, 797, 1754
BbvI GCAGC 6 cut(s) 292, 1092, 1153, 1348, 1362, 1976
BccI CCATC 5 cut(s) 263, 338, 721, 1672, 1933
BceAI ACGGC 4 cut(s) 65, 523, 901, 1961
BcgI CGANNNNNNTGC 2 cut(s) 1397, 1431
BciT130I CCWGG 2 cut(s) 262, 989
BcnI CCSGG 2 cut(s) 558, 846
BcoDI GTCTC 7 cut(s) 386, 429, 466, 1155, 1613, 1775, 1891
BfaI CTAG 5 cut(s) 422, 1304, 1647, 1778, 2004
BfoI RGCGCY 1 cut(s) 976
BglII AGATCT 1 cut(s) 1102
Bme1390I CCNGG 4 cut(s) 262, 558, 846, 989
Bme18I GGWCC 6 cut(s) 842, 898, 1182, 1388, 1554, 1988
BmeRI GACNNNNNGTC 1 cut(s) 511
BmeT110I CYCGRG 3 cut(s) 26, 548, 932
BmgBI CACGTC 1 cut(s) 54
BmgT120I GGNCC 7 cut(s) 842, 898, 1182, 1388, 1554, 1947, 1988
BmrFI CCNGG 4 cut(s) 262, 558, 846, 989
BmrI ACTGGG 1 cut(s) 896
BmsI GCATC 2 cut(s) 1216, 1579
BmtI GCTAGC 1 cut(s) 1307
BmuI ACTGGG 1 cut(s) 896
BpiI GAAGAC 1 cut(s) 1126
BpmI CTGGAG 2 cut(s) 469, 1137
Bpu14I TTCGAA 1 cut(s) 1035
BpuEI CTTGAG 1 cut(s) 1756
BpuMI CCSGG 2 cut(s) 558, 846
Bsa29I ATCGAT 1 cut(s) 725
BsaBI GATNNNNATC 1 cut(s) 1375
BsaHI GRCGYC 1 cut(s) 973
BsaI GGTCTC 1 cut(s) 386
BsaJI CCNNGG 5 cut(s) 260, 549, 987, 1461, 2011
BsaWI WCCGGW 8 cut(s) 403, 431, 451, 563, 829, 835, 862, 1766
BsaXI ACNNNNNCTCC 6 cut(s) 311, 341, 617, 647, 656, 686
Bse118I RCCGGY 6 cut(s) 403, 572, 617, 706, 835, 975
Bse1I ACTGG 3 cut(s) 271, 511, 902
Bse3DI GCAATG 4 cut(s) 1075, 1356, 1657, 1772
Bse8I GATNNNNATC 1 cut(s) 1375
BseAI TCCGGA 1 cut(s) 829
BseBI CCWGG 2 cut(s) 262, 989
BseCI ATCGAT 1 cut(s) 725
BseDI CCNNGG 5 cut(s) 260, 549, 987, 1461, 2011
BseGI GGATG 4 cut(s) 255, 460, 880, 1471
BseJI GATNNNNATC 1 cut(s) 1375
BseMI GCAATG 4 cut(s) 1075, 1356, 1657, 1772
BseMII CTCAG 4 cut(s) 377, 926, 1608, 1788
BseNI ACTGG 3 cut(s) 271, 511, 902
BseRI GAGGAG 6 cut(s) 56, 59, 74, 146, 638, 1744
BseSI GKGCMC 1 cut(s) 504
BseX3I CGGCCG 1 cut(s) 636
BseXI GCAGC 6 cut(s) 292, 1092, 1153, 1348, 1362, 1976
BseYI CCCAGC 1 cut(s) 105
Bsh1236I CGCG 3 cut(s) 306, 375, 1879
Bsh1285I CGRYCG 3 cut(s) 325, 639, 840
BshFI GGCC 6 cut(s) 510, 638, 731, 1412, 1948, 2010
BshNI GGYRCC 4 cut(s) 95, 560, 972, 1972
BshTI ACCGGT 2 cut(s) 403, 835
BshVI ATCGAT 1 cut(s) 725
BsiEI CGRYCG 3 cut(s) 325, 639, 840
BsiHKAI GWGCWC 4 cut(s) 66, 504, 797, 1754
BsiHKCI CYCGRG 3 cut(s) 26, 548, 932
BslFI GGGAC 7 cut(s) 64, 122, 769, 884, 1168, 1401, 1956
BsmAI GTCTC 7 cut(s) 386, 429, 466, 1155, 1613, 1775, 1891
BsmBI CGTCTC 2 cut(s) 429, 1613
BsmFI GGGAC 7 cut(s) 64, 122, 769, 884, 1168, 1401, 1956
BsmI GAATGC 1 cut(s) 1339
BsnI GGCC 6 cut(s) 510, 638, 731, 1412, 1948, 2010
Bso31I GGTCTC 1 cut(s) 386
BsoBI CYCGRG 3 cut(s) 26, 548, 932
Bsp119I TTCGAA 1 cut(s) 1035
Bsp1286I GDGCHC 4 cut(s) 66, 504, 797, 1754
Bsp13I TCCGGA 1 cut(s) 829
BspANI GGCC 6 cut(s) 510, 638, 731, 1412, 1948, 2010
BspCNI CTCAG 4 cut(s) 378, 925, 1609, 1789
BspDI ATCGAT 1 cut(s) 725
BspEI TCCGGA 1 cut(s) 829
BspFNI CGCG 3 cut(s) 306, 375, 1879
BspOI GCTAGC 1 cut(s) 1307
BspPI GGATC 8 cut(s) 426, 821, 931, 1009, 1274, 1365, 1378, 1777
BspQI GCTCTTC 4 cut(s) 785, 1625, 1742, 1813
BspT104I TTCGAA 1 cut(s) 1035
BspT107I GGYRCC 4 cut(s) 95, 560, 972, 1972
BspTNI GGTCTC 1 cut(s) 386
BsrBI CCGCTC 1 cut(s) 327
BsrDI GCAATG 4 cut(s) 1075, 1356, 1657, 1772
BsrFI RCCGGY 6 cut(s) 403, 572, 617, 706, 835, 975
BsrI ACTGG 3 cut(s) 271, 511, 902
BssAI RCCGGY 6 cut(s) 403, 572, 617, 706, 835, 975
BssECI CCNNGG 5 cut(s) 260, 549, 987, 1461, 2011
BssNI GRCGYC 1 cut(s) 973
BssSI CACGAG 2 cut(s) 1416, 1537
BssT1I CCWWGG 1 cut(s) 1461
Bst2BI CACGAG 2 cut(s) 1416, 1537
Bst2UI CCWGG 2 cut(s) 262, 989
Bst6I CTCTTC 8 cut(s) 435, 785, 887, 1490, 1625, 1682, 1742, 1813
BstACI GRCGYC 1 cut(s) 973
BstBI TTCGAA 1 cut(s) 1035
BstDEI CTNAG 5 cut(s) 386, 912, 1491, 1617, 1797
BstENI CCTNNNNNAGG 1 cut(s) 1954
BstF5I GGATG 4 cut(s) 255, 460, 880, 1471
BstFNI CGCG 3 cut(s) 306, 375, 1879
BstH2I RGCGCY 1 cut(s) 976
BstHHI GCGC 7 cut(s) 80, 138, 180, 375, 975, 1350, 1881
BstMAI GTCTC 7 cut(s) 386, 429, 466, 1155, 1613, 1775, 1891
BstMCI CGRYCG 3 cut(s) 325, 639, 840
BstMWI GCNNNNNNNGC 9 cut(s) 102, 283, 286, 1211, 1350, 1970, 1991, 2000, 2016
BstNI CCWGG 2 cut(s) 262, 989
BstNSI RCATGY 1 cut(s) 1028
BstSCI CCNGG 4 cut(s) 260, 556, 844, 987
BstSLI GKGCMC 1 cut(s) 504
BstUI CGCG 3 cut(s) 306, 375, 1879
BstV1I GCAGC 6 cut(s) 292, 1092, 1153, 1348, 1362, 1976
BstV2I GAAGAC 1 cut(s) 1126
BstX2I RGATCY 4 cut(s) 418, 936, 1102, 1370
BstYI RGATCY 4 cut(s) 418, 936, 1102, 1370
BstZI CGGCCG 1 cut(s) 636
Bsu15I ATCGAT 1 cut(s) 725
BsuRI GGCC 6 cut(s) 510, 638, 731, 1412, 1948, 2010
BsuTUI ATCGAT 1 cut(s) 725
BtrI CACGTC 1 cut(s) 54
BtsCI GGATG 4 cut(s) 255, 460, 880, 1471
BtsI GCAGTG 2 cut(s) 787, 1974
BtsIMutI CAGTG 2 cut(s) 787, 1974
CfoI GCGC 7 cut(s) 80, 138, 180, 375, 975, 1350, 1881
Cfr10I RCCGGY 6 cut(s) 403, 572, 617, 706, 835, 975
Cfr13I GGNCC 7 cut(s) 842, 898, 1182, 1388, 1554, 1947, 1988
ClaI ATCGAT 1 cut(s) 725
CpoI CGGWCCG 1 cut(s) 842
CseI GACGC 1 cut(s) 312
Csp6I GTAC 3 cut(s) 576, 1069, 1524
CspAI ACCGGT 2 cut(s) 403, 835
CspI CGGWCCG 1 cut(s) 842
CviAII CATG 2 cut(s) 45, 1025
CviQI GTAC 3 cut(s) 576, 1069, 1524
DdeI CTNAG 5 cut(s) 386, 912, 1491, 1617, 1797
DinI GGCGCC 1 cut(s) 974
DriI GACNNNNNGTC 1 cut(s) 511
EaeI YGGCCR 3 cut(s) 508, 636, 729
EagI CGGCCG 1 cut(s) 636
Eam1104I CTCTTC 8 cut(s) 435, 785, 887, 1490, 1625, 1682, 1742, 1813
Eam1105I GACNNNNNGTC 1 cut(s) 511
EarI CTCTTC 8 cut(s) 435, 785, 887, 1490, 1625, 1682, 1742, 1813
EciI GGCGGA 2 cut(s) 185, 217
Ecl136II GAGCTC 3 cut(s) 64, 795, 1752
EclXI CGGCCG 1 cut(s) 636
Eco130I CCWWGG 1 cut(s) 1461
Eco24I GRGCYC 3 cut(s) 66, 797, 1754
Eco31I GGTCTC 1 cut(s) 386
Eco47I GGWCC 6 cut(s) 842, 898, 1182, 1388, 1554, 1988
Eco52I CGGCCG 1 cut(s) 636
Eco53kI GAGCTC 3 cut(s) 64, 795, 1752
Eco57I CTGAAG 1 cut(s) 1275
Eco88I CYCGRG 3 cut(s) 26, 548, 932
EcoICRI GAGCTC 3 cut(s) 64, 795, 1752
EcoNI CCTNNNNNAGG 1 cut(s) 1954
EcoO109I RGGNCCY 2 cut(s) 898, 1554
EcoRI GAATTC 2 cut(s) 1600, 1657
EcoRII CCWGG 2 cut(s) 260, 987
EcoT14I CCWWGG 1 cut(s) 1461
EcoT38I GRGCYC 3 cut(s) 66, 797, 1754
EgeI GGCGCC 1 cut(s) 974
EheI GGCGCC 1 cut(s) 974
ErhI CCWWGG 1 cut(s) 1461
Esp3I CGTCTC 2 cut(s) 429, 1613
FaeI CATG 2 cut(s) 48, 1028
FaiI YATR 7 cut(s) 46, 381, 570, 951, 1005, 1026, 1130
FalI AAGNNNNNCTT 2 cut(s) 1497, 1529
FaqI GGGAC 7 cut(s) 64, 122, 769, 884, 1168, 1401, 1956
FatI CATG 2 cut(s) 44, 1024
FauI CCCGC 3 cut(s) 171, 703, 892
FokI GGATG 4 cut(s) 242, 467, 887, 1478
FriOI GRGCYC 3 cut(s) 66, 797, 1754
FspBI CTAG 5 cut(s) 422, 1304, 1647, 1778, 2004
GlaI GCGC 7 cut(s) 79, 137, 179, 374, 974, 1349, 1880
GsaI CCCAGC 1 cut(s) 109
GsuI CTGGAG 2 cut(s) 469, 1137
HaeII RGCGCY 1 cut(s) 976
HaeIII GGCC 6 cut(s) 510, 638, 731, 1412, 1948, 2010
HgaI GACGC 1 cut(s) 312
HhaI GCGC 7 cut(s) 80, 138, 180, 375, 975, 1350, 1881
Hin1I GRCGYC 1 cut(s) 973
Hin1II CATG 2 cut(s) 48, 1028
Hin6I GCGC 7 cut(s) 78, 136, 178, 373, 973, 1348, 1879
HinP1I GCGC 7 cut(s) 78, 136, 178, 373, 973, 1348, 1879
HphI GGTGA 3 cut(s) 151, 632, 811
Hpy166II GTNNAC 4 cut(s) 85, 355, 502, 860
Hpy8I GTNNAC 4 cut(s) 85, 355, 502, 860
Hpy99I CGWCG 5 cut(s) 119, 245, 296, 306, 509
HpyAV CCTTC 5 cut(s) 343, 746, 754, 950, 1052
HpyCH4IV ACGT 3 cut(s) 53, 222, 316
HpyF10VI GCNNNNNNNGC 9 cut(s) 102, 283, 286, 1211, 1350, 1970, 1991, 2000, 2016
HpyF3I CTNAG 5 cut(s) 386, 912, 1491, 1617, 1797
HpySE526I ACGT 3 cut(s) 53, 222, 316
Hsp92I GRCGYC 1 cut(s) 973
Hsp92II CATG 2 cut(s) 48, 1028
HspAI GCGC 7 cut(s) 78, 136, 178, 373, 973, 1348, 1879
KasI GGCGCC 1 cut(s) 972
KflI GGGWCCC 1 cut(s) 898
Kpn2I TCCGGA 1 cut(s) 829
KroI GCCGGC 1 cut(s) 975
KroNI GCCGGC 1 cut(s) 977
LguI GCTCTTC 4 cut(s) 785, 1625, 1742, 1813
Lsp1109I GCAGC 6 cut(s) 292, 1092, 1153, 1348, 1362, 1976
LweI GCATC 2 cut(s) 1216, 1579
MaeI CTAG 5 cut(s) 422, 1304, 1647, 1778, 2004
MaeII ACGT 3 cut(s) 53, 222, 316
MaeIII GTNAC 2 cut(s) 317, 1486
MbiI CCGCTC 1 cut(s) 327
MflI RGATCY 4 cut(s) 418, 936, 1102, 1370
MhlI GDGCHC 4 cut(s) 66, 504, 797, 1754
MluCI AATT 8 cut(s) 19, 999, 1245, 1438, 1470, 1600, 1657, 1729
Mly113I GGCGCC 1 cut(s) 973
MlyI GAGTC 6 cut(s) 104, 533, 743, 753, 775, 1616
MmeI TCCRAC 2 cut(s) 168, 820
MroI TCCGGA 1 cut(s) 829
MroNI GCCGGC 1 cut(s) 975
MroXI GAANNNNTTC 1 cut(s) 1245
MseI TTAA 2 cut(s) 207, 447
MslI CAYNNNNRTG 1 cut(s) 43
MspA1I CMGCKG 3 cut(s) 283, 1433, 1985
MspR9I CCNGG 4 cut(s) 262, 558, 846, 989
Mva1269I GAATGC 1 cut(s) 1339
MvaI CCWGG 2 cut(s) 262, 989
MvnI CGCG 3 cut(s) 306, 375, 1879
MwoI GCNNNNNNNGC 9 cut(s) 102, 283, 286, 1211, 1350, 1970, 1991, 2000, 2016
NaeI GCCGGC 1 cut(s) 977
NarI GGCGCC 1 cut(s) 973
NciI CCSGG 2 cut(s) 558, 846
NgoMIV GCCGGC 1 cut(s) 975
NheI GCTAGC 1 cut(s) 1303
NlaIII CATG 2 cut(s) 48, 1028
NmeAIII GCCGAG 2 cut(s) 664, 757
NmuCI GTSAC 1 cut(s) 1486
NspI RCATGY 1 cut(s) 1028
NspV TTCGAA 1 cut(s) 1035
PaeR7I CTCGAG 1 cut(s) 932
PciI ACATGT 1 cut(s) 1024
PciSI GCTCTTC 4 cut(s) 785, 1625, 1742, 1813
PcsI WCGNNNNNNNCGW 3 cut(s) 78, 636, 684
PctI GAATGC 1 cut(s) 1339
PdiI GCCGGC 1 cut(s) 977
PdmI GAANNNNTTC 1 cut(s) 1245
PfeI GAWTC 7 cut(s) 668, 689, 722, 878, 908, 1273, 1295
PflFI GACNNNGTC 1 cut(s) 113
PflMI CCANNNNNTGG 1 cut(s) 261
PinAI ACCGGT 2 cut(s) 403, 835
PleI GAGTC 6 cut(s) 104, 532, 742, 752, 774, 1615
PluTI GGCGCC 1 cut(s) 976
PpsI GAGTC 6 cut(s) 104, 532, 742, 752, 774, 1615
PpuMI RGGWCCY 2 cut(s) 898, 1554
PscI ACATGT 1 cut(s) 1024
Psp124BI GAGCTC 3 cut(s) 66, 797, 1754
Psp1406I AACGTT 1 cut(s) 316
Psp5II RGGWCCY 2 cut(s) 898, 1554
Psp6I CCWGG 2 cut(s) 260, 987
PspFI CCCAGC 1 cut(s) 105
PspGI CCWGG 2 cut(s) 260, 987
PspPI GGNCC 7 cut(s) 842, 898, 1182, 1388, 1554, 1947, 1988
PspPPI RGGWCCY 2 cut(s) 898, 1554
PsuI RGATCY 4 cut(s) 418, 936, 1102, 1370
PsyI GACNNNGTC 1 cut(s) 113
PvuII CAGCTG 2 cut(s) 1433, 1985
RsaI GTAC 3 cut(s) 577, 1070, 1525
RsaNI GTAC 3 cut(s) 576, 1069, 1524
RseI CAYNNNNRTG 1 cut(s) 43
Rsr2I CGGWCCG 1 cut(s) 842
RsrII CGGWCCG 1 cut(s) 842
SacI GAGCTC 3 cut(s) 66, 797, 1754
SapI GCTCTTC 4 cut(s) 785, 1625, 1742, 1813
SaqAI TTAA 2 cut(s) 207, 447
Sau96I GGNCC 7 cut(s) 842, 898, 1182, 1388, 1554, 1947, 1988
SchI GAGTC 6 cut(s) 104, 533, 743, 753, 775, 1616
ScrFI CCNGG 4 cut(s) 262, 558, 846, 989
SduI GDGCHC 4 cut(s) 66, 504, 797, 1754
SfaNI GCATC 2 cut(s) 1216, 1579
SfoI GGCGCC 1 cut(s) 974
Sfr274I CTCGAG 1 cut(s) 932
SfuI TTCGAA 1 cut(s) 1035
SinI GGWCC 6 cut(s) 842, 898, 1182, 1388, 1554, 1988
SlaI CTCGAG 1 cut(s) 932
SmiMI CAYNNNNRTG 1 cut(s) 43
SmlI CTYRAG 2 cut(s) 932, 1735
SmoI CTYRAG 2 cut(s) 932, 1735
Sse9I AATT 8 cut(s) 19, 999, 1245, 1438, 1470, 1600, 1657, 1729
SspDI GGCGCC 1 cut(s) 972
SspMI CTAG 5 cut(s) 422, 1304, 1647, 1778, 2004
SstI GAGCTC 3 cut(s) 66, 797, 1754
StyD4I CCNGG 4 cut(s) 260, 556, 844, 987
StyI CCWWGG 1 cut(s) 1461
TaiI ACGT 3 cut(s) 56, 225, 319
TaqII GACCGA 1 cut(s) 1170
TasI AATT 8 cut(s) 19, 999, 1245, 1438, 1470, 1600, 1657, 1729
TatI WGTACW 1 cut(s) 1523
TauI GCSGC 7 cut(s) 201, 233, 280, 286, 289, 1907, 1964
TfiI GAWTC 7 cut(s) 668, 689, 722, 878, 908, 1273, 1295
Tru1I TTAA 2 cut(s) 207, 447
Tru9I TTAA 2 cut(s) 207, 447
TscAI CASTG 2 cut(s) 787, 1974
TseFI GTSAC 1 cut(s) 1486
TseI GCWGC 6 cut(s) 280, 1080, 1166, 1350, 1361, 1964
Tsp45I GTSAC 1 cut(s) 1486
TspDTI ATGAA 3 cut(s) 891, 1482, 1760
TspGWI ACGGA 4 cut(s) 103, 693, 1472, 1637
TspRI CASTG 2 cut(s) 787, 1974
Tth111I GACNNNGTC 1 cut(s) 113
Van91I CCANNNNNTGG 1 cut(s) 261
VneI GTGCAC 1 cut(s) 500
VpaK11BI GGWCC 6 cut(s) 842, 898, 1182, 1388, 1554, 1988
XagI CCTNNNNNAGG 1 cut(s) 1954
XapI RAATTY 4 cut(s) 1245, 1600, 1657, 1729
XbaI TCTAGA 1 cut(s) 421
XceI RCATGY 1 cut(s) 1028
XcmI CCANNNNNNNNNTGG 3 cut(s) 493, 1437, 1675
XhoI CTCGAG 1 cut(s) 932
XmnI GAANNNNTTC 1 cut(s) 1245
XspI CTAG 5 cut(s) 422, 1304, 1647, 1778, 2004
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.