RLG00000023528
MYB Family

Myb-like DNA-binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0009263
Physical Location & Seq
Reverse (-)
24944299 .. 24947397
3099 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000023528

Sequence Viewer

Length: 2112 bp
ATGGATAAGCCCAATTTTCCGGAGAAACAAACCACCGCAACCACAACAACGTGGACGACGTGGGAGGAGCTCCTCCTCGCCTGCGCCGTCCACCGCTACGGCACTCAGAGCTGGGACTCCGTCGCCGCCCAGCTCCGCAAGCGCAGTTCCAACCTCCACCACCTCACTCCTCAGATATGCAAACACAAGTTCCACGACCTCCGACGCCGTTTCAGCAACCACAACGACGCCGTTTGCGACGGCGACGGCGACGACGCAGCATCCTCCCCTATTCCATGGCTCGATCAGTTGCGACAACAATGCCTCGATGAACTCCGGCGCGAGGTCCAACGCTCCGACGTCTCCATCGTGTCTCTGCAATCGAAGGTGGAGAGATTGAAAGAAGTGCGCGAAAAATCGGATCCGGATAAGAGCGGAGAGGAACAAGAGATCAAAGATAAATCCGTCGAGCCGGAAAACATCTCGCCGGAAATCGGCGAGAAAGAGGTTTCCGAGCGTAATGATGGCCGGTCTTTCGACGAGTCCAACACCACAGATCCGAAACCTGAGGTTCCGGAAACCGGAGTCGACGTGGCTGAGAAAGACGCGGTCGAACCGGCCGCCGGGGAGATCGGAGCGGTCGAGAAGTCGAGTAACCCGGTGGTGGTGGAGGACTCGTGTAATGGGAGTTCCGATTCGGTGGTGAAGGAAGCGCCGGTTGCTGAGTCGGAGAAGGCGAACTCGGGCGAGTTGAGGGAATCGGTGGCGGAGTCGAAGGGGACGAAGGAGAGTCGGAGTAGCAGTGAGGTTCAGAGCTCGGCGAGTTTGTCGAGAAAATTAGGGCCGGAACTGAAGCCGAGCGAACCGGTCGAACCGGACCAGGAGGACCAATCTCCCGCCATGAATCAGATCCCCGTGGAATCTCAGCCGTTGGTTGATTTCCTCCGGATTCTCCGATCTCACAAGGCCGCTACGTTTTTCGAGCGCCGGCTCCAGTCCCAGGACACATCCATTTATACCAACATGATTCGGCAACATACAGATTTTGAATTGGTGCAAACCAGACTTAATGGAGGTTGGTACTCAAGCTGCAAGAGCAAATTTTTTAGAGATATCTTGCTTATTTGTAAGAATGCCATAGTCTTCTTCGGGAAAAGGGCTCCAGAATACACGGCTGCCTGTGAGCTTCAATTACTTGTTTTAAAGGAGATGGCTCGTAAGGATCGTAATCAAGATCCATCACCTAAACAAGAAACTCAGATGCCATCTAAAGAAGAAACGCTGATACCACCAGTTCTACCATTGAAGCCTGAAACTGAATCATCGGAGTCGTTGCTAGCAAAATCAAAACTATCTATTCCATTGACTGCTTGTCGCAAACGTAGCTCAATAAAGGCCAGAGCATCCACCTCTTCTTCAGCACCAGACATAAAAAAAGAGCAAAAGACTACATTATTGCGTGATGTCAAACCAGCTATAAGTTGGAAGCAAAAAGAAGATTCCTCAGATGAAGTTGAGGAGCAACTTCCTGTCACAAAGAAGAGAAGAAAAGAAAGAGTTGGGAGCAATTCAAGAAACAACTCGAACAAAAATAGCAGGAGCCGAAGTGATACTAAGAAGGAGAAGAATCCAGATGCCAATGCCAATGCAAATGTTGGTTCTTCAACCAGAGCAATGATTAGTAATGAGAATTCAGAGTCCATAGCCGAGATGGATAAGAAGAGCAATAGTAATACAAGTGGGAAAAGGCAAAGTGCAGAAAAATTCTTGAATAGAATGAAGAGGAGCTCTGCATCCAACAACAAATCAGAGACATTGAAAATTCCTGAGAATGATAGCAAAGGTGCAGCAGAGCAGAGAAAGAACGGAAACATCAAAGGGAATGCACAGAAAGCAGCAGAGCAGAGAAAAAATGGAAATGGCAAAGGGAGTGCACAGAAAGAAGTAGCAGAGCAGAAGAAAGGTGGAAATGGAAAAGGAAATGCGCAGAAAGAACAAGCTTCACGTAGAGGTTCTGGTGGGAGACAGGCTGCGAAAGAGCAAGGAAGCCCCACGAAAAGGAGCGTGGGACGGCCCTCAAAGAGGGCAGCGGAAACAACGAGAGCTGCTCCAGCTAAACGGCGTAGATACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Bromodomain Myb_DNA-binding

Protein Analysis

704

Amino Acids

77.98

Weight (kDa)

9.21

Isoelectric Point (pI)

66.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 17 - 51 3.3e-06 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 342
Acc16I TGCGCA 1 cut(s) 1965
AccBSI CCGCTC 2 cut(s) 414, 617
AccI GTMKAC 1 cut(s) 567
AccII CGCG 3 cut(s) 321, 390, 587
AccIII TCCGGA 4 cut(s) 19, 403, 553, 924
AclWI GGATC 6 cut(s) 395, 408, 530, 883, 1208, 1209
AcoI YGGCCR 2 cut(s) 505, 597
AcsI RAATTY 4 cut(s) 1079, 1669, 1742, 1800
AcuI CTGAAG 2 cut(s) 851, 1380
AcyI GRCGYC 3 cut(s) 205, 228, 339
AfaI GTAC 1 cut(s) 1061
AfiI CCNNNNNNNGG 8 cut(s) 322, 473, 560, 602, 643, 979, 2037, 2061
AgeI ACCGGT 1 cut(s) 844
AgsI TTSAA 8 cut(s) 379, 1028, 1169, 1285, 1551, 1644, 1750, 1798
AhdI GACNNNNNGTC 1 cut(s) 1350
AjiI CACGTC 2 cut(s) 60, 571
AjnI CCWGG 2 cut(s) 858, 978
Alw21I GWGCWC 4 cut(s) 72, 797, 1769, 1915
Alw26I GTCTC 4 cut(s) 346, 357, 1784, 1996
Alw44I GTGCAC 1 cut(s) 1911
AlwI GGATC 6 cut(s) 395, 408, 530, 883, 1208, 1209
Ama87I CYCGRG 1 cut(s) 721
Aor13HI TCCGGA 4 cut(s) 19, 403, 553, 924
AoxI GGCC 6 cut(s) 505, 597, 821, 945, 1374, 2051
ApaLI GTGCAC 1 cut(s) 1911
ApeKI GCWGC 8 cut(s) 257, 1068, 1154, 1826, 1874, 2009, 2066, 2084
ApoI RAATTY 4 cut(s) 1079, 1669, 1742, 1800
AsiGI ACCGGT 1 cut(s) 844
AspLEI GCGC 7 cut(s) 86, 144, 321, 390, 694, 966, 1966
AspS9I GGNCC 5 cut(s) 325, 821, 856, 865, 2052
AsuC2I CCSGG 2 cut(s) 604, 638
AsuHPI GGTGA 2 cut(s) 694, 1212
AsuNHI GCTAGC 1 cut(s) 1315
AvaI CYCGRG 1 cut(s) 721
AvaII GGWCC 3 cut(s) 325, 856, 865
AxyI CCTNAGG 1 cut(s) 546
BaeGI GKGCMC 1 cut(s) 1915
BamHI GGATCC 1 cut(s) 400
BanII GRGCYC 4 cut(s) 72, 797, 1141, 1769
BauI CACGAG 1 cut(s) 655
BbsI GAAGAC 1 cut(s) 1114
Bbv12I GWGCWC 4 cut(s) 72, 797, 1769, 1915
BbvI GCAGC 8 cut(s) 269, 1055, 1141, 1838, 1886, 1996, 2071, 2078
BccI CCATC 6 cut(s) 353, 497, 1183, 1225, 1252, 1684
BceAI ACGGC 9 cut(s) 71, 115, 192, 215, 256, 262, 892, 1167, 2066
BcgI CGANNNNNNTGC 2 cut(s) 282, 316
BciT130I CCWGG 2 cut(s) 860, 980
BcnI CCSGG 2 cut(s) 604, 638
BcoDI GTCTC 4 cut(s) 346, 357, 1784, 1996
BfaI CTAG 2 cut(s) 1316, 2110
BfoI RGCGCY 2 cut(s) 695, 967
Bme1390I CCNGG 4 cut(s) 604, 638, 860, 980
Bme18I GGWCC 3 cut(s) 325, 856, 865
BmeRI GACNNNNNGTC 1 cut(s) 1350
BmeT110I CYCGRG 1 cut(s) 721
BmgBI CACGTC 2 cut(s) 60, 571
BmgT120I GGNCC 5 cut(s) 325, 821, 856, 865, 2052
BmiI GGNNCC 5 cut(s) 402, 552, 971, 1140, 1580
BmrFI CCNGG 4 cut(s) 604, 638, 860, 980
BmsI GCATC 5 cut(s) 269, 1230, 1391, 1603, 1781
BmtI GCTAGC 1 cut(s) 1319
BpiI GAAGAC 1 cut(s) 1114
BplI GAGNNNNNCTC 2 cut(s) 2071, 2103
BpmI CTGGAG 3 cut(s) 956, 1125, 2073
BpuEI CTTGAG 1 cut(s) 1048
BpuMI CCSGG 2 cut(s) 604, 638
BsaAI YACGTR 1 cut(s) 1985
BsaBI GATNNNNATC 1 cut(s) 1206
BsaHI GRCGYC 3 cut(s) 205, 228, 339
BsaJI CCNNGG 4 cut(s) 275, 603, 894, 978
BsaWI WCCGGW 7 cut(s) 19, 403, 553, 560, 844, 853, 924
BsaXI ACNNNNNCTCC 8 cut(s) 555, 585, 641, 671, 766, 796, 1570, 1600
Bsc4I CCNNNNNNNGG 8 cut(s) 322, 473, 560, 602, 643, 979, 2037, 2061
Bse118I RCCGGY 5 cut(s) 507, 595, 694, 844, 966
Bse1I ACTGG 2 cut(s) 973, 1271
Bse21I CCTNAGG 1 cut(s) 546
Bse3DI GCAATG 1 cut(s) 1659
Bse8I GATNNNNATC 1 cut(s) 1206
BseAI TCCGGA 4 cut(s) 19, 403, 553, 924
BseBI CCWGG 2 cut(s) 860, 980
BseDI CCNNGG 4 cut(s) 275, 603, 894, 978
BseGI GGATG 4 cut(s) 260, 986, 1382, 1772
BseJI GATNNNNATC 1 cut(s) 1206
BseLI CCNNNNNNNGG 8 cut(s) 322, 473, 560, 602, 643, 979, 2037, 2061
BseMI GCAATG 1 cut(s) 1659
BseMII CTCAG 9 cut(s) 119, 185, 537, 567, 693, 917, 1250, 1497, 1797
BseNI ACTGG 2 cut(s) 973, 1271
BseRI GAGGAG 6 cut(s) 62, 65, 80, 159, 1511, 1777
BseSI GKGCMC 1 cut(s) 1915
BseX3I CGGCCG 1 cut(s) 597
BseXI GCAGC 8 cut(s) 269, 1055, 1141, 1838, 1886, 1996, 2071, 2078
BseYI CCCAGC 2 cut(s) 111, 129
BsgI GTGCAG 2 cut(s) 1755, 1845
Bsh1236I CGCG 3 cut(s) 321, 390, 587
Bsh1285I CGRYCG 4 cut(s) 591, 600, 621, 849
BshFI GGCC 6 cut(s) 507, 599, 823, 947, 1376, 2053
BshTI ACCGGT 1 cut(s) 844
BsiEI CGRYCG 4 cut(s) 591, 600, 621, 849
BsiHKAI GWGCWC 4 cut(s) 72, 797, 1769, 1915
BsiHKCI CYCGRG 1 cut(s) 721
BslFI GGGAC 4 cut(s) 128, 772, 961, 2061
BslI CCNNNNNNNGG 8 cut(s) 322, 473, 560, 602, 643, 979, 2037, 2061
BsmAI GTCTC 4 cut(s) 346, 357, 1784, 1996
BsmBI CGTCTC 1 cut(s) 346
BsmFI GGGAC 4 cut(s) 128, 772, 961, 2061
BsmI GAATGC 2 cut(s) 1117, 1867
BsnI GGCC 6 cut(s) 507, 599, 823, 947, 1376, 2053
BsoBI CYCGRG 1 cut(s) 721
Bsp1286I GDGCHC 5 cut(s) 72, 797, 1141, 1769, 1915
Bsp13I TCCGGA 4 cut(s) 19, 403, 553, 924
Bsp143I GATC 9 cut(s) 283, 400, 429, 535, 609, 888, 935, 1201, 1213
Bsp19I CCATGG 1 cut(s) 275
BspANI GGCC 6 cut(s) 507, 599, 823, 947, 1376, 2053
BspCNI CTCAG 9 cut(s) 118, 184, 538, 568, 694, 916, 1249, 1496, 1798
BspEI TCCGGA 4 cut(s) 19, 403, 553, 924
BspFNI CGCG 3 cut(s) 321, 390, 587
BspLI GGNNCC 5 cut(s) 402, 552, 971, 1140, 1580
BspOI GCTAGC 1 cut(s) 1319
BspPI GGATC 6 cut(s) 395, 408, 530, 883, 1208, 1209
BspQI GCTCTTC 1 cut(s) 1694
BsrBI CCGCTC 2 cut(s) 414, 617
BsrDI GCAATG 1 cut(s) 1659
BsrFI RCCGGY 5 cut(s) 507, 595, 694, 844, 966
BsrI ACTGG 2 cut(s) 973, 1271
BssAI RCCGGY 5 cut(s) 507, 595, 694, 844, 966
BssECI CCNNGG 4 cut(s) 275, 603, 894, 978
BssMI GATC 9 cut(s) 283, 400, 429, 535, 609, 888, 935, 1201, 1213
BssNI GRCGYC 3 cut(s) 205, 228, 339
BssSI CACGAG 1 cut(s) 655
BssT1I CCWWGG 1 cut(s) 275
Bst2BI CACGAG 1 cut(s) 655
Bst2UI CCWGG 2 cut(s) 860, 980
Bst6I CTCTTC 4 cut(s) 1396, 1514, 1694, 1754
BstACI GRCGYC 3 cut(s) 205, 228, 339
BstBAI YACGTR 1 cut(s) 1985
BstC8I GCNNGC 4 cut(s) 82, 140, 968, 1317
BstDSI CCRYGG 2 cut(s) 275, 894
BstENI CCTNNNNNAGG 1 cut(s) 2059
BstF5I GGATG 4 cut(s) 260, 986, 1382, 1772
BstFNI CGCG 3 cut(s) 321, 390, 587
BstH2I RGCGCY 2 cut(s) 695, 967
BstHHI GCGC 7 cut(s) 86, 144, 321, 390, 694, 966, 1966
BstKTI GATC 9 cut(s) 286, 403, 432, 538, 612, 891, 938, 1204, 1216
BstMAI GTCTC 4 cut(s) 346, 357, 1784, 1996
BstMBI GATC 9 cut(s) 283, 400, 429, 535, 609, 888, 935, 1201, 1213
BstMCI CGRYCG 4 cut(s) 591, 600, 621, 849
BstMWI GCNNNNNNNGC 8 cut(s) 108, 139, 213, 698, 1074, 1362, 1871, 2090
BstNI CCWGG 2 cut(s) 860, 980
BstSCI CCNGG 4 cut(s) 602, 636, 858, 978
BstSLI GKGCMC 1 cut(s) 1915
BstUI CGCG 3 cut(s) 321, 390, 587
BstV1I GCAGC 8 cut(s) 269, 1055, 1141, 1838, 1886, 1996, 2071, 2078
BstV2I GAAGAC 1 cut(s) 1114
BstX2I RGATCY 4 cut(s) 400, 535, 888, 1213
BstYI RGATCY 4 cut(s) 400, 535, 888, 1213
BstZI CGGCCG 1 cut(s) 597
Bsu36I CCTNAGG 1 cut(s) 546
BsuRI GGCC 6 cut(s) 507, 599, 823, 947, 1376, 2053
BtgI CCRYGG 2 cut(s) 275, 894
BtrI CACGTC 2 cut(s) 60, 571
BtsCI GGATG 4 cut(s) 260, 986, 1382, 1772
BtsI GCAGTG 1 cut(s) 787
BtsIMutI CAGTG 1 cut(s) 787
Cac8I GCNNGC 4 cut(s) 82, 140, 968, 1317
CfoI GCGC 7 cut(s) 86, 144, 321, 390, 694, 966, 1966
Cfr10I RCCGGY 5 cut(s) 507, 595, 694, 844, 966
Cfr13I GGNCC 5 cut(s) 325, 821, 856, 865, 2052
CseI GACGC 4 cut(s) 213, 236, 263, 593
Csp6I GTAC 1 cut(s) 1060
CspAI ACCGGT 1 cut(s) 844
CviAII CATG 3 cut(s) 276, 880, 1003
CviQI GTAC 1 cut(s) 1060
DpnI GATC 9 cut(s) 285, 402, 431, 537, 611, 890, 937, 1203, 1215
DpnII GATC 9 cut(s) 283, 400, 429, 535, 609, 888, 935, 1201, 1213
DraI TTTAAA 1 cut(s) 1182
DriI GACNNNNNGTC 1 cut(s) 1350
EaeI YGGCCR 2 cut(s) 505, 597
EagI CGGCCG 1 cut(s) 597
Eam1104I CTCTTC 4 cut(s) 1396, 1514, 1694, 1754
Eam1105I GACNNNNNGTC 1 cut(s) 1350
EarI CTCTTC 4 cut(s) 1396, 1514, 1694, 1754
EciI GGCGGA 1 cut(s) 761
Ecl136II GAGCTC 3 cut(s) 70, 795, 1767
EclXI CGGCCG 1 cut(s) 597
Eco130I CCWWGG 1 cut(s) 275
Eco24I GRGCYC 4 cut(s) 72, 797, 1141, 1769
Eco32I GATATC 1 cut(s) 1093
Eco47I GGWCC 3 cut(s) 325, 856, 865
Eco52I CGGCCG 1 cut(s) 597
Eco53kI GAGCTC 3 cut(s) 70, 795, 1767
Eco57I CTGAAG 2 cut(s) 851, 1380
Eco81I CCTNAGG 1 cut(s) 546
Eco88I CYCGRG 1 cut(s) 721
EcoICRI GAGCTC 3 cut(s) 70, 795, 1767
EcoNI CCTNNNNNAGG 1 cut(s) 2059
EcoRI GAATTC 1 cut(s) 1669
EcoRII CCWGG 2 cut(s) 858, 978
EcoRV GATATC 1 cut(s) 1093
EcoT14I CCWWGG 1 cut(s) 275
EcoT38I GRGCYC 4 cut(s) 72, 797, 1141, 1769
ErhI CCWWGG 1 cut(s) 275
Esp3I CGTCTC 1 cut(s) 346
FaeI CATG 3 cut(s) 279, 883, 1006
FaqI GGGAC 4 cut(s) 128, 772, 961, 2061
FatI CATG 3 cut(s) 275, 879, 1002
FauI CCCGC 1 cut(s) 883
FblI GTMKAC 1 cut(s) 567
FokI GGATG 4 cut(s) 247, 973, 1369, 1759
FriOI GRGCYC 4 cut(s) 72, 797, 1141, 1769
FspBI CTAG 2 cut(s) 1316, 2110
FspI TGCGCA 1 cut(s) 1965
GlaI GCGC 7 cut(s) 85, 143, 320, 389, 693, 965, 1965
GsaI CCCAGC 2 cut(s) 115, 133
GsuI CTGGAG 3 cut(s) 956, 1125, 2073
HaeII RGCGCY 2 cut(s) 695, 967
HaeIII GGCC 6 cut(s) 507, 599, 823, 947, 1376, 2053
HgaI GACGC 4 cut(s) 213, 236, 263, 593
HhaI GCGC 7 cut(s) 86, 144, 321, 390, 694, 966, 1966
Hin1I GRCGYC 3 cut(s) 205, 228, 339
Hin1II CATG 3 cut(s) 279, 883, 1006
Hin6I GCGC 7 cut(s) 84, 142, 319, 388, 692, 964, 1964
HinP1I GCGC 7 cut(s) 84, 142, 319, 388, 692, 964, 1964
HincII GTYRAC 1 cut(s) 568
HindII GTYRAC 1 cut(s) 568
HindIII AAGCTT 1 cut(s) 1977
HphI GGTGA 2 cut(s) 694, 1212
Hpy166II GTNNAC 4 cut(s) 54, 91, 568, 1913
Hpy8I GTNNAC 4 cut(s) 54, 91, 568, 1913
HpyAV CCTTC 6 cut(s) 358, 679, 706, 748, 757, 1591
HpyCH4IV ACGT 7 cut(s) 50, 59, 339, 570, 953, 1360, 1984
HpyF10VI GCNNNNNNNGC 8 cut(s) 108, 139, 213, 698, 1074, 1362, 1871, 2090
HpySE526I ACGT 7 cut(s) 50, 59, 339, 570, 953, 1360, 1984
Hsp92I GRCGYC 3 cut(s) 205, 228, 339
Hsp92II CATG 3 cut(s) 279, 883, 1006
HspAI GCGC 7 cut(s) 84, 142, 319, 388, 692, 964, 1964
Kpn2I TCCGGA 4 cut(s) 19, 403, 553, 924
KroI GCCGGC 1 cut(s) 966
KroNI GCCGGC 1 cut(s) 968
Kzo9I GATC 9 cut(s) 283, 400, 429, 535, 609, 888, 935, 1201, 1213
LguI GCTCTTC 1 cut(s) 1694
Lsp1109I GCAGC 8 cut(s) 269, 1055, 1141, 1838, 1886, 1996, 2071, 2078
LweI GCATC 5 cut(s) 269, 1230, 1391, 1603, 1781
MaeI CTAG 2 cut(s) 1316, 2110
MaeII ACGT 7 cut(s) 50, 59, 339, 570, 953, 1360, 1984
MaeIII GTNAC 2 cut(s) 632, 1510
MalI GATC 9 cut(s) 285, 402, 431, 537, 611, 890, 937, 1203, 1215
MbiI CCGCTC 2 cut(s) 414, 617
MboI GATC 9 cut(s) 283, 400, 429, 535, 609, 888, 935, 1201, 1213
MflI RGATCY 4 cut(s) 400, 535, 888, 1213
MhlI GDGCHC 5 cut(s) 72, 797, 1141, 1769, 1915
MluCI AATT 9 cut(s) 13, 815, 1028, 1079, 1169, 1546, 1669, 1742, 1800
MlyI GAGTC 9 cut(s) 110, 530, 573, 647, 713, 758, 778, 1316, 1685
MmeI TCCRAC 9 cut(s) 174, 226, 352, 360, 549, 687, 752, 1442, 1800
MroI TCCGGA 4 cut(s) 19, 403, 553, 924
MroNI GCCGGC 1 cut(s) 966
MseI TTAA 2 cut(s) 1047, 1181
MspA1I CMGCKG 1 cut(s) 2069
MspR9I CCNGG 4 cut(s) 604, 638, 860, 980
Mva1269I GAATGC 2 cut(s) 1117, 1867
MvaI CCWGG 2 cut(s) 860, 980
MvnI CGCG 3 cut(s) 321, 390, 587
MwoI GCNNNNNNNGC 8 cut(s) 108, 139, 213, 698, 1074, 1362, 1871, 2090
NaeI GCCGGC 1 cut(s) 968
NciI CCSGG 2 cut(s) 604, 638
NcoI CCATGG 1 cut(s) 275
NdeII GATC 9 cut(s) 283, 400, 429, 535, 609, 888, 935, 1201, 1213
NgoMIV GCCGGC 1 cut(s) 966
NheI GCTAGC 1 cut(s) 1315
NlaIII CATG 3 cut(s) 279, 883, 1006
NlaIV GGNNCC 5 cut(s) 402, 552, 971, 1140, 1580
NmeAIII GCCGAG 3 cut(s) 776, 861, 1711
NmuCI GTSAC 1 cut(s) 1510
NsbI TGCGCA 1 cut(s) 1965
PciSI GCTCTTC 1 cut(s) 1694
PcsI WCGNNNNNNNCGW 9 cut(s) 56, 84, 234, 246, 345, 618, 713, 758, 1201
PctI GAATGC 2 cut(s) 1117, 1867
PdiI GCCGGC 1 cut(s) 968
PfeI GAWTC 9 cut(s) 674, 737, 883, 899, 928, 1006, 1298, 1478, 1606
PflFI GACNNNGTC 2 cut(s) 119, 587
PinAI ACCGGT 1 cut(s) 844
PleI GAGTC 9 cut(s) 110, 529, 572, 647, 712, 757, 777, 1315, 1684
PpsI GAGTC 9 cut(s) 110, 529, 572, 647, 712, 757, 777, 1315, 1684
Ppu21I YACGTR 1 cut(s) 1985
Psp124BI GAGCTC 3 cut(s) 72, 797, 1769
Psp6I CCWGG 2 cut(s) 858, 978
PspFI CCCAGC 2 cut(s) 111, 129
PspGI CCWGG 2 cut(s) 858, 978
PspN4I GGNNCC 5 cut(s) 402, 552, 971, 1140, 1580
PspPI GGNCC 5 cut(s) 325, 821, 856, 865, 2052
PsrI GAACNNNNNNTAC 2 cut(s) 652, 684
PsuI RGATCY 4 cut(s) 400, 535, 888, 1213
PsyI GACNNNGTC 2 cut(s) 119, 587
RsaI GTAC 1 cut(s) 1061
RsaNI GTAC 1 cut(s) 1060
SacI GAGCTC 3 cut(s) 72, 797, 1769
SalI GTCGAC 1 cut(s) 566
SapI GCTCTTC 1 cut(s) 1694
SaqAI TTAA 2 cut(s) 1047, 1181
Sau3AI GATC 9 cut(s) 283, 400, 429, 535, 609, 888, 935, 1201, 1213
Sau96I GGNCC 5 cut(s) 325, 821, 856, 865, 2052
SchI GAGTC 9 cut(s) 110, 530, 573, 647, 713, 758, 778, 1316, 1685
ScrFI CCNGG 4 cut(s) 604, 638, 860, 980
SduI GDGCHC 5 cut(s) 72, 797, 1141, 1769, 1915
SfaNI GCATC 5 cut(s) 269, 1230, 1391, 1603, 1781
SinI GGWCC 3 cut(s) 325, 856, 865
SmlI CTYRAG 1 cut(s) 1063
SmoI CTYRAG 1 cut(s) 1063
Sse9I AATT 9 cut(s) 13, 815, 1028, 1079, 1169, 1546, 1669, 1742, 1800
SspMI CTAG 2 cut(s) 1316, 2110
SstI GAGCTC 3 cut(s) 72, 797, 1769
StyD4I CCNGG 4 cut(s) 602, 636, 858, 978
StyI CCWWGG 1 cut(s) 275
TaiI ACGT 7 cut(s) 53, 62, 342, 573, 956, 1363, 1987
TasI AATT 9 cut(s) 13, 815, 1028, 1079, 1169, 1546, 1669, 1742, 1800
TauI GCSGC 3 cut(s) 128, 602, 950
TfiI GAWTC 9 cut(s) 674, 737, 883, 899, 928, 1006, 1298, 1478, 1606
Tru1I TTAA 2 cut(s) 1047, 1181
Tru9I TTAA 2 cut(s) 1047, 1181
TscAI CASTG 1 cut(s) 787
TseFI GTSAC 1 cut(s) 1510
TseI GCWGC 8 cut(s) 257, 1068, 1154, 1826, 1874, 2009, 2066, 2084
Tsp45I GTSAC 1 cut(s) 1510
TspDTI ATGAA 4 cut(s) 324, 896, 1503, 1772
TspGWI ACGGA 3 cut(s) 109, 433, 1860
TspRI CASTG 1 cut(s) 787
Tth111I GACNNNGTC 2 cut(s) 119, 587
VneI GTGCAC 1 cut(s) 1911
VpaK11BI GGWCC 3 cut(s) 325, 856, 865
XagI CCTNNNNNAGG 1 cut(s) 2059
XapI RAATTY 4 cut(s) 1079, 1669, 1742, 1800
XcmI CCANNNNNNNNNTGG 2 cut(s) 1458, 1687
XmiI GTMKAC 1 cut(s) 567
XspI CTAG 2 cut(s) 1316, 2110
ZraI GACGTC 1 cut(s) 340
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.