Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003400.1

Orthogroup ID

OG0009263

Physical Location & Seq

Genomic Coordinates Reverse (-)

96332 .. 99115

Gene Structure 2784 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003400.1_g000029.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2034 bp

atggataagcccaattttccggagaaacaaaccaccgcaaccacaacaacatggacgacgtgggaggagctcctcctcgcctgcgccgtccaccgctacggcactcagagctgggactccgtcgccgcccagctccgcaagcgcagttccaatctccaccacctcactcctcagatatgcaaacacaagttccacgacctccgacgccgcttcaaccaccaccacgacgccgccgtcggcgacggcgacgacgcagcatcctcccctattccatggctcgatcagttgcgacaacaacgcctcgatgaactccggcgcgaggtccaacgctccgacgtctccatcgtgtctctgcaatcgaaggtggagagattgaaagaagtgcgcgaaaagttggatctggataagagcggagaggaacaagagatcaaagacaaatccgtcgagccggaaaatgtcgccgagaaagaggtttccgagcgtaatgatggccggtctttcgacgaatccaacaccacagatccgaaacgtgagattcctgaaaccggagtcgacgcggcggagaaagaatcggaaccggtcgaaccggccgccggggagatcggagcggtcgagaagtcgagtaacccggtggtggtggaggactcgtgtaatgggagttccgattcggtggtgaaggaagcgccggttgctgagtcggagaaggcgaactcgggcgagttgagggaatcggtggcggagtcgaagggtacgaaggagagtcggagtagcagtgaggttcagagctcggcgagtttgtcgaggaaattagggccagaactgaagccgagcgaaccggtcgaaccggaccaggaggaccaatctcccgccatgaatcagatccccgtggaatctcagccgttggacacatctatttataccaacatgattcggcaacatacagattttgaattggtgcaaaccagacttaatggaggttggtactcaagctgcaagagcaaattttttagagatatcttgcttatttgtaagaatgccatagtcttcttcgggaaaagggctccagaatacacggctgcctgtgagctgcaattacttgttttaaaggagatggctcgtaaggatcgtaatcaagatccatcacctaaacaacaaactcatatgccatctaaagaagaaacgctgacaccaccagctctaccattgaagcctgaaactgaatcatcggagtcgttgctagcaaaatcaaaactatcaattccattgactgcttgtcgcaagcgcagctcaataaaggccagagcatccacctcttcttcagcaccagacataaaaaaagagcaaaagactacattattgcgtgatgtcaaaccagctataagttggaagcaaaaagaagattcctcggatgaagttgaggagcaacttcctgtcacaaagaagagaagaaaagaaagagttgggagcaattcaagaaacaactcgaacaaaaatagcaggagccgaagtgatactaagaaggagaagaatccagatgccaatgccaatgcaaatgttgtttcttcaaccagagcaatgattagtaatgagaattcagagtccatagccgagatggataagaagagcagtagtaatacaagtgggaaaaggcaaagtgcagaaaaattcttgagtagaatgaagagaagctctggatccaacaacaaatcagagacattgaaaattcctgagaatgatagcaaaggtgcagcagagcagagaaagaacggaaacatcaaagggaatgcacagaaaacagcagagcagagaaaaaatggaaatggcaaagggagtgcacagaaagaagtagcagagcagaagaaaggtggaaatggaaaaggaaatgcgcagaaagaacaatcttcacgtagaggttctggtgggagacaggctgcgaaagagcaaggaagccccacgaaaaggagcgtgggacggccctcaaagagggcagcggaaacaacgagagctgctccagctaaacggcgtagatactag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain Myb_DNA-binding

Protein Analysis

677

Amino Acids

75.07

Weight (kDa)

9.3

Isoelectric Point (pI)

65.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009263)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42150 AT3G57980 AT3G57980
fragaria_vesca	FvH4_6g22470
malus_domestica	MD12G1059100.v1.1 MD14G1058900.v1.1
prunus_persica	Prupe.7G075800_v2.0.a1
pyrus_communis	pycom12g05190 pycom14g04770
rosa_chinensis	RchiOBHm_Chr3g0479881
rosa_laevigata	RLG00000023528
rosa_multiflora	Rmu_co8449113.1_g000001 Rmu_sc0003400.1_g000029 Rmu_sc0018138.1_g000001
rosa_roxburghii	Rroxscaffold_6G00401930
rosa_rugosa	Rorug03G0179200
rosa_samantha	Rh3AG230200 Rh3BG262800 Rh3CG260100 Rh3DG256200
rosa_wichuraiana	Rw0G015250 Rw0G019250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	233, 440
AatII	GACGTC	1 cut(s)	339
Acc16I	TGCGCA	1 cut(s)	1887
AccBSI	CCGCTC	2 cut(s)	411, 608
AccI	GTMKAC	1 cut(s)	552
AccII	CGCG	3 cut(s)	318, 387, 557
AccIII	TCCGGA	1 cut(s)	19
AclWI	GGATC	7 cut(s)	405, 515, 874, 1130, 1131, 1689, 1702
AcoI	YGGCCR	2 cut(s)	490, 588
AcsI	RAATTY	4 cut(s)	1001, 1591, 1664, 1722
AcuI	CTGAAG	2 cut(s)	842, 1302
AcyI	GRCGYC	3 cut(s)	205, 228, 336
AfaI	GTAC	2 cut(s)	751, 983
AfiI	CCNNNNNNNGG	6 cut(s)	319, 545, 593, 634, 1959, 1983
AgeI	ACCGGT	2 cut(s)	577, 835
AgsI	TTSAA	7 cut(s)	214, 376, 950, 1207, 1473, 1566, 1720
AhdI	GACNNNNNGTC	1 cut(s)	1272
AjiI	CACGTC	1 cut(s)	60
AjnI	CCWGG	1 cut(s)	849
Alw21I	GWGCWC	3 cut(s)	72, 788, 1837
Alw26I	GTCTC	4 cut(s)	343, 354, 1706, 1918
Alw44I	GTGCAC	1 cut(s)	1833
AlwI	GGATC	7 cut(s)	405, 515, 874, 1130, 1131, 1689, 1702
Ama87I	CYCGRG	1 cut(s)	712
Aor13HI	TCCGGA	1 cut(s)	19
AoxI	GGCC	5 cut(s)	490, 588, 812, 1296, 1973
ApaLI	GTGCAC	1 cut(s)	1833
ApeKI	GCWGC	9 cut(s)	254, 990, 1076, 1087, 1284, 1748, 1931, 1988, 2006
ApoI	RAATTY	4 cut(s)	1001, 1591, 1664, 1722
AsiGI	ACCGGT	2 cut(s)	577, 835
AspLEI	GCGC	7 cut(s)	86, 144, 318, 387, 685, 1284, 1888
AspS9I	GGNCC	5 cut(s)	322, 812, 847, 856, 1974
AsuC2I	CCSGG	2 cut(s)	595, 629
AsuHPI	GGTGA	2 cut(s)	685, 1134
AsuNHI	GCTAGC	1 cut(s)	1237
AvaI	CYCGRG	1 cut(s)	712
AvaII	GGWCC	3 cut(s)	322, 847, 856
BaeGI	GKGCMC	1 cut(s)	1837
BamHI	GGATCC	1 cut(s)	1694
BanII	GRGCYC	3 cut(s)	72, 788, 1063
BauI	CACGAG	1 cut(s)	646
BbsI	GAAGAC	1 cut(s)	1036
Bbv12I	GWGCWC	3 cut(s)	72, 788, 1837
BbvI	GCAGC	9 cut(s)	266, 977, 1063, 1074, 1296, 1760, 1918, 1993, 2000
BccI	CCATC	6 cut(s)	350, 482, 1105, 1147, 1174, 1606
BceAI	ACGGC	7 cut(s)	71, 115, 218, 259, 883, 1089, 1988
BciT130I	CCWGG	1 cut(s)	851
BcnI	CCSGG	2 cut(s)	595, 629
BcoDI	GTCTC	4 cut(s)	343, 354, 1706, 1918
BfaI	CTAG	2 cut(s)	1238, 2032
BfoI	RGCGCY	1 cut(s)	686
Bme1390I	CCNGG	3 cut(s)	595, 629, 851
Bme18I	GGWCC	3 cut(s)	322, 847, 856
BmeRI	GACNNNNNGTC	1 cut(s)	1272
BmeT110I	CYCGRG	1 cut(s)	712
BmgBI	CACGTC	1 cut(s)	60
BmgT120I	GGNCC	5 cut(s)	322, 812, 847, 856, 1974
BmiI	GGNNCC	4 cut(s)	576, 1062, 1502, 1696
BmrFI	CCNGG	3 cut(s)	595, 629, 851
BmsI	GCATC	3 cut(s)	266, 1313, 1525
BmtI	GCTAGC	1 cut(s)	1241
BpiI	GAAGAC	1 cut(s)	1036
BplI	GAGNNNNNCTC	2 cut(s)	1993, 2025
BpmI	CTGGAG	2 cut(s)	1047, 1995
BpuEI	CTTGAG	2 cut(s)	970, 1690
BpuMI	CCSGG	2 cut(s)	595, 629
BsaAI	YACGTR	1 cut(s)	1907
BsaBI	GATNNNNATC	1 cut(s)	1128
BsaHI	GRCGYC	3 cut(s)	205, 228, 336
BsaJI	CCNNGG	4 cut(s)	272, 594, 885, 1404
BsaWI	WCCGGW	5 cut(s)	19, 545, 577, 835, 844
BsaXI	ACNNNNNCTCC	6 cut(s)	632, 662, 757, 787, 1492, 1522
Bsc4I	CCNNNNNNNGG	6 cut(s)	319, 545, 593, 634, 1959, 1983
Bse118I	RCCGGY	5 cut(s)	492, 577, 586, 685, 835
Bse3DI	GCAATG	1 cut(s)	1581
Bse8I	GATNNNNATC	1 cut(s)	1128
BseAI	TCCGGA	1 cut(s)	19
BseBI	CCWGG	1 cut(s)	851
BseDI	CCNNGG	4 cut(s)	272, 594, 885, 1404
BseGI	GGATG	3 cut(s)	257, 1304, 1414
BseJI	GATNNNNATC	1 cut(s)	1128
BseLI	CCNNNNNNNGG	6 cut(s)	319, 545, 593, 634, 1959, 1983
BseMI	GCAATG	1 cut(s)	1581
BseMII	CTCAG	5 cut(s)	119, 185, 684, 908, 1719
BseRI	GAGGAG	5 cut(s)	62, 65, 80, 159, 1433
BseSI	GKGCMC	1 cut(s)	1837
BseX3I	CGGCCG	1 cut(s)	588
BseXI	GCAGC	9 cut(s)	266, 977, 1063, 1074, 1296, 1760, 1918, 1993, 2000
BseYI	CCCAGC	2 cut(s)	111, 129
BsgI	GTGCAG	2 cut(s)	1677, 1767
Bsh1236I	CGCG	3 cut(s)	318, 387, 557
Bsh1285I	CGRYCG	4 cut(s)	582, 591, 612, 840
BshFI	GGCC	5 cut(s)	492, 590, 814, 1298, 1975
BshTI	ACCGGT	2 cut(s)	577, 835
BsiEI	CGRYCG	4 cut(s)	582, 591, 612, 840
BsiHKAI	GWGCWC	3 cut(s)	72, 788, 1837
BsiHKCI	CYCGRG	1 cut(s)	712
BslFI	GGGAC	2 cut(s)	128, 1983
BslI	CCNNNNNNNGG	6 cut(s)	319, 545, 593, 634, 1959, 1983
BsmAI	GTCTC	4 cut(s)	343, 354, 1706, 1918
BsmBI	CGTCTC	1 cut(s)	343
BsmFI	GGGAC	2 cut(s)	128, 1983
BsmI	GAATGC	2 cut(s)	1039, 1789
BsnI	GGCC	5 cut(s)	492, 590, 814, 1298, 1975
BsoBI	CYCGRG	1 cut(s)	712
Bsp1286I	GDGCHC	4 cut(s)	72, 788, 1063, 1837
Bsp13I	TCCGGA	1 cut(s)	19
Bsp143I	GATC	9 cut(s)	280, 397, 426, 520, 600, 879, 1123, 1135, 1694
Bsp19I	CCATGG	1 cut(s)	272
BspANI	GGCC	5 cut(s)	492, 590, 814, 1298, 1975
BspCNI	CTCAG	5 cut(s)	118, 184, 685, 907, 1720
BspEI	TCCGGA	1 cut(s)	19
BspFNI	CGCG	3 cut(s)	318, 387, 557
BspLI	GGNNCC	4 cut(s)	576, 1062, 1502, 1696
BspOI	GCTAGC	1 cut(s)	1241
BspPI	GGATC	7 cut(s)	405, 515, 874, 1130, 1131, 1689, 1702
BspQI	GCTCTTC	1 cut(s)	1616
BsrBI	CCGCTC	2 cut(s)	411, 608
BsrDI	GCAATG	1 cut(s)	1581
BsrFI	RCCGGY	5 cut(s)	492, 577, 586, 685, 835
BssAI	RCCGGY	5 cut(s)	492, 577, 586, 685, 835
BssECI	CCNNGG	4 cut(s)	272, 594, 885, 1404
BssMI	GATC	9 cut(s)	280, 397, 426, 520, 600, 879, 1123, 1135, 1694
BssNI	GRCGYC	3 cut(s)	205, 228, 336
BssSI	CACGAG	1 cut(s)	646
BssT1I	CCWWGG	1 cut(s)	272
Bst2BI	CACGAG	1 cut(s)	646
Bst2UI	CCWGG	1 cut(s)	851
Bst6I	CTCTTC	4 cut(s)	1318, 1436, 1616, 1676
BstACI	GRCGYC	3 cut(s)	205, 228, 336
BstBAI	YACGTR	1 cut(s)	1907
BstC8I	GCNNGC	4 cut(s)	82, 140, 1239, 1280
BstDEI	CTNAG	6 cut(s)	105, 171, 693, 894, 1515, 1728
BstDSI	CCRYGG	2 cut(s)	272, 885
BstENI	CCTNNNNNAGG	1 cut(s)	1981
BstF5I	GGATG	3 cut(s)	257, 1304, 1414
BstFNI	CGCG	3 cut(s)	318, 387, 557
BstH2I	RGCGCY	1 cut(s)	686
BstHHI	GCGC	7 cut(s)	86, 144, 318, 387, 685, 1284, 1888
BstKTI	GATC	9 cut(s)	283, 400, 429, 523, 603, 882, 1126, 1138, 1697
BstMAI	GTCTC	4 cut(s)	343, 354, 1706, 1918
BstMBI	GATC	9 cut(s)	280, 397, 426, 520, 600, 879, 1123, 1135, 1694
BstMCI	CGRYCG	4 cut(s)	582, 591, 612, 840
BstMWI	GCNNNNNNNGC	6 cut(s)	108, 139, 689, 996, 1284, 2012
BstNI	CCWGG	1 cut(s)	851
BstSCI	CCNGG	3 cut(s)	593, 627, 849
BstSLI	GKGCMC	1 cut(s)	1837
BstUI	CGCG	3 cut(s)	318, 387, 557
BstV1I	GCAGC	9 cut(s)	266, 977, 1063, 1074, 1296, 1760, 1918, 1993, 2000
BstV2I	GAAGAC	1 cut(s)	1036
BstX2I	RGATCY	5 cut(s)	397, 520, 879, 1135, 1694
BstYI	RGATCY	5 cut(s)	397, 520, 879, 1135, 1694
BstZI	CGGCCG	1 cut(s)	588
BsuRI	GGCC	5 cut(s)	492, 590, 814, 1298, 1975
BtgI	CCRYGG	2 cut(s)	272, 885
BtrI	CACGTC	1 cut(s)	60
BtsCI	GGATG	3 cut(s)	257, 1304, 1414
BtsI	GCAGTG	1 cut(s)	778
BtsIMutI	CAGTG	1 cut(s)	778
Cac8I	GCNNGC	4 cut(s)	82, 140, 1239, 1280
CfoI	GCGC	7 cut(s)	86, 144, 318, 387, 685, 1284, 1888
Cfr10I	RCCGGY	5 cut(s)	492, 577, 586, 685, 835
Cfr13I	GGNCC	5 cut(s)	322, 812, 847, 856, 1974
CseI	GACGC	4 cut(s)	213, 236, 260, 563
Csp6I	GTAC	2 cut(s)	750, 982
CspAI	ACCGGT	2 cut(s)	577, 835
CviAII	CATG	4 cut(s)	51, 273, 871, 925
CviQI	GTAC	2 cut(s)	750, 982
DdeI	CTNAG	6 cut(s)	105, 171, 693, 894, 1515, 1728
DpnI	GATC	9 cut(s)	282, 399, 428, 522, 602, 881, 1125, 1137, 1696
DpnII	GATC	9 cut(s)	280, 397, 426, 520, 600, 879, 1123, 1135, 1694
DraI	TTTAAA	1 cut(s)	1104
DrdI	GACNNNNNNGTC	2 cut(s)	233, 440
DriI	GACNNNNNGTC	1 cut(s)	1272
DseDI	GACNNNNNNGTC	2 cut(s)	233, 440
EaeI	YGGCCR	2 cut(s)	490, 588
EagI	CGGCCG	1 cut(s)	588
Eam1104I	CTCTTC	4 cut(s)	1318, 1436, 1616, 1676
Eam1105I	GACNNNNNGTC	1 cut(s)	1272
EarI	CTCTTC	4 cut(s)	1318, 1436, 1616, 1676
EciI	GGCGGA	2 cut(s)	575, 752
Ecl136II	GAGCTC	2 cut(s)	70, 786
EclXI	CGGCCG	1 cut(s)	588
Eco130I	CCWWGG	1 cut(s)	272
Eco24I	GRGCYC	3 cut(s)	72, 788, 1063
Eco32I	GATATC	1 cut(s)	1015
Eco47I	GGWCC	3 cut(s)	322, 847, 856
Eco52I	CGGCCG	1 cut(s)	588
Eco53kI	GAGCTC	2 cut(s)	70, 786
Eco57I	CTGAAG	2 cut(s)	842, 1302
Eco88I	CYCGRG	1 cut(s)	712
EcoICRI	GAGCTC	2 cut(s)	70, 786
EcoNI	CCTNNNNNAGG	1 cut(s)	1981
EcoRI	GAATTC	1 cut(s)	1591
EcoRII	CCWGG	1 cut(s)	849
EcoRV	GATATC	1 cut(s)	1015
EcoT14I	CCWWGG	1 cut(s)	272
EcoT38I	GRGCYC	3 cut(s)	72, 788, 1063
ErhI	CCWWGG	1 cut(s)	272
Esp3I	CGTCTC	1 cut(s)	343
FaeI	CATG	4 cut(s)	54, 276, 874, 928
FaqI	GGGAC	2 cut(s)	128, 1983
FatI	CATG	4 cut(s)	50, 272, 870, 924
FauI	CCCGC	1 cut(s)	874
FauNDI	CATATG	1 cut(s)	1161
FblI	GTMKAC	1 cut(s)	552
FokI	GGATG	3 cut(s)	244, 1291, 1421
FriOI	GRGCYC	3 cut(s)	72, 788, 1063
FspBI	CTAG	2 cut(s)	1238, 2032
FspI	TGCGCA	1 cut(s)	1887
GlaI	GCGC	7 cut(s)	85, 143, 317, 386, 684, 1283, 1887
GsaI	CCCAGC	2 cut(s)	115, 133
GsuI	CTGGAG	2 cut(s)	1047, 1995
HaeII	RGCGCY	1 cut(s)	686
HaeIII	GGCC	5 cut(s)	492, 590, 814, 1298, 1975
HgaI	GACGC	4 cut(s)	213, 236, 260, 563
HhaI	GCGC	7 cut(s)	86, 144, 318, 387, 685, 1284, 1888
Hin1I	GRCGYC	3 cut(s)	205, 228, 336
Hin1II	CATG	4 cut(s)	54, 276, 874, 928
Hin6I	GCGC	7 cut(s)	84, 142, 316, 385, 683, 1282, 1886
HinP1I	GCGC	7 cut(s)	84, 142, 316, 385, 683, 1282, 1886
HincII	GTYRAC	1 cut(s)	553
HindII	GTYRAC	1 cut(s)	553
HphI	GGTGA	2 cut(s)	685, 1134
Hpy166II	GTNNAC	3 cut(s)	91, 553, 1835
Hpy8I	GTNNAC	3 cut(s)	91, 553, 1835
HpyAV	CCTTC	6 cut(s)	355, 670, 697, 739, 748, 1513
HpyCH4IV	ACGT	4 cut(s)	59, 336, 529, 1906
HpyF10VI	GCNNNNNNNGC	6 cut(s)	108, 139, 689, 996, 1284, 2012
HpyF3I	CTNAG	6 cut(s)	105, 171, 693, 894, 1515, 1728
HpySE526I	ACGT	4 cut(s)	59, 336, 529, 1906
Hsp92I	GRCGYC	3 cut(s)	205, 228, 336
Hsp92II	CATG	4 cut(s)	54, 276, 874, 928
HspAI	GCGC	7 cut(s)	84, 142, 316, 385, 683, 1282, 1886
Kpn2I	TCCGGA	1 cut(s)	19
Kzo9I	GATC	9 cut(s)	280, 397, 426, 520, 600, 879, 1123, 1135, 1694
LguI	GCTCTTC	1 cut(s)	1616
Lsp1109I	GCAGC	9 cut(s)	266, 977, 1063, 1074, 1296, 1760, 1918, 1993, 2000
LweI	GCATC	3 cut(s)	266, 1313, 1525
MaeI	CTAG	2 cut(s)	1238, 2032
MaeII	ACGT	4 cut(s)	59, 336, 529, 1906
MaeIII	GTNAC	2 cut(s)	623, 1432
MalI	GATC	9 cut(s)	282, 399, 428, 522, 602, 881, 1125, 1137, 1696
MbiI	CCGCTC	2 cut(s)	411, 608
MboI	GATC	9 cut(s)	280, 397, 426, 520, 600, 879, 1123, 1135, 1694
MflI	RGATCY	5 cut(s)	397, 520, 879, 1135, 1694
MhlI	GDGCHC	4 cut(s)	72, 788, 1063, 1837
MlyI	GAGTC	8 cut(s)	110, 558, 638, 704, 749, 769, 1238, 1607
MroI	TCCGGA	1 cut(s)	19
MseI	TTAA	2 cut(s)	969, 1103
MspA1I	CMGCKG	1 cut(s)	1991
MspR9I	CCNGG	3 cut(s)	595, 629, 851
Mva1269I	GAATGC	2 cut(s)	1039, 1789
MvaI	CCWGG	1 cut(s)	851
MvnI	CGCG	3 cut(s)	318, 387, 557
MwoI	GCNNNNNNNGC	6 cut(s)	108, 139, 689, 996, 1284, 2012
NciI	CCSGG	2 cut(s)	595, 629
NcoI	CCATGG	1 cut(s)	272
NdeI	CATATG	1 cut(s)	1161
NdeII	GATC	9 cut(s)	280, 397, 426, 520, 600, 879, 1123, 1135, 1694
NheI	GCTAGC	1 cut(s)	1237
NlaIII	CATG	4 cut(s)	54, 276, 874, 928
NlaIV	GGNNCC	4 cut(s)	576, 1062, 1502, 1696
NmeAIII	GCCGAG	4 cut(s)	487, 767, 852, 1633
NmuCI	GTSAC	1 cut(s)	1432
NsbI	TGCGCA	1 cut(s)	1887
PciSI	GCTCTTC	1 cut(s)	1616
PcsI	WCGNNNNNNNCGW	8 cut(s)	84, 231, 243, 342, 609, 704, 749, 1123
PctI	GAATGC	2 cut(s)	1039, 1789
PflFI	GACNNNGTC	1 cut(s)	119
PinAI	ACCGGT	2 cut(s)	577, 835
PleI	GAGTC	8 cut(s)	110, 557, 638, 703, 748, 768, 1237, 1606
PpsI	GAGTC	8 cut(s)	110, 557, 638, 703, 748, 768, 1237, 1606
Ppu21I	YACGTR	1 cut(s)	1907
Psp124BI	GAGCTC	2 cut(s)	72, 788
Psp6I	CCWGG	1 cut(s)	849
PspFI	CCCAGC	2 cut(s)	111, 129
PspGI	CCWGG	1 cut(s)	849
PspN4I	GGNNCC	4 cut(s)	576, 1062, 1502, 1696
PspPI	GGNCC	5 cut(s)	322, 812, 847, 856, 1974
PsrI	GAACNNNNNNTAC	2 cut(s)	643, 675
PsuI	RGATCY	5 cut(s)	397, 520, 879, 1135, 1694
PsyI	GACNNNGTC	1 cut(s)	119
RsaI	GTAC	2 cut(s)	751, 983
RsaNI	GTAC	2 cut(s)	750, 982
SacI	GAGCTC	2 cut(s)	72, 788
SalI	GTCGAC	1 cut(s)	551
SapI	GCTCTTC	1 cut(s)	1616
SaqAI	TTAA	2 cut(s)	969, 1103
Sau3AI	GATC	9 cut(s)	280, 397, 426, 520, 600, 879, 1123, 1135, 1694
Sau96I	GGNCC	5 cut(s)	322, 812, 847, 856, 1974
SchI	GAGTC	8 cut(s)	110, 558, 638, 704, 749, 769, 1238, 1607
ScrFI	CCNGG	3 cut(s)	595, 629, 851
SduI	GDGCHC	4 cut(s)	72, 788, 1063, 1837
SfaNI	GCATC	3 cut(s)	266, 1313, 1525
SinI	GGWCC	3 cut(s)	322, 847, 856
SmlI	CTYRAG	2 cut(s)	985, 1669
SmoI	CTYRAG	2 cut(s)	985, 1669
SspMI	CTAG	2 cut(s)	1238, 2032
SstI	GAGCTC	2 cut(s)	72, 788
StyD4I	CCNGG	3 cut(s)	593, 627, 849
StyI	CCWWGG	1 cut(s)	272
TaiI	ACGT	4 cut(s)	62, 339, 532, 1909
TauI	GCSGC	5 cut(s)	128, 210, 233, 560, 593
Tru1I	TTAA	2 cut(s)	969, 1103
Tru9I	TTAA	2 cut(s)	969, 1103
TscAI	CASTG	1 cut(s)	778
TseFI	GTSAC	1 cut(s)	1432
TseI	GCWGC	9 cut(s)	254, 990, 1076, 1087, 1284, 1748, 1931, 1988, 2006
Tsp45I	GTSAC	1 cut(s)	1432
TspDTI	ATGAA	4 cut(s)	321, 887, 1425, 1694
TspGWI	ACGGA	3 cut(s)	109, 430, 1782
TspRI	CASTG	1 cut(s)	778
Tth111I	GACNNNGTC	1 cut(s)	119
VneI	GTGCAC	1 cut(s)	1833
VpaK11BI	GGWCC	3 cut(s)	322, 847, 856
XagI	CCTNNNNNAGG	1 cut(s)	1981
XapI	RAATTY	4 cut(s)	1001, 1591, 1664, 1722
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1380, 1609
XmiI	GTMKAC	1 cut(s)	552
XspI	CTAG	2 cut(s)	1238, 2032
ZraI	GACGTC	1 cut(s)	337

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.