Rroxscaffold_6G00401930
MYB Family

Myb-like DNA-binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0009263
Physical Location & Seq
Reverse (-)
24331934 .. 24335455
3522 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00401930.1

Sequence Viewer

Length: 2145 bp
ATGGATAAGCCCAATTTTCCGGAGAAACAAACCACCGCAACCACAACAACAACAACAACAACAACAACAACAACATGGACGACGTGGGAGGAGCTCCTCCTCGCCTGCGCCGTCCACCGCTACGGCACTCAGAGCTGGGACTCCGTCGCCGCCCAGCTCCGCAAGCGCAGTTCCAACCTCCACCACCTCACTCCTCAGATATGCAAACACAAGTTCCACGACCTCCGACGCCGCTTCAACCCCCACAACGACGCCGTTTGCGACGGCGACGGCGACGATACAGCATCCTCCCCTATTCCATGGCTCGATCAGTTGCGACAACAACGCCTCGATGAACTCCGGCGCGAGGTCCAACGCTCCGACGTCTCCATCGTGTCTCTGCAATCGAAGGTGGAGAGATTGAAAGAAGTGCGCGAAAAATCGGATCTGGATAAGAGCGGAGAGGAACAAGAGATCAAAGACAAATCCGTCGAGCCGGAAAACATCTCGCCGGAAAATGTCGCCGAGAAAGAGGTTTCCGAGCGGAATGATGGCCGGTCTTTCGACGATTCCAACACCACAGATCCGAAACCTGAGATTCCGGAAACCGGAGTCGACGCTGGTGAGAAAGACGCGGAACCGGTGGAACCGGCCGCCGGGGAGATCGGAGCGGTCGAGAAGTCGAGTAACCCGGTGGTGGTGGAGGACTCGTGTAATGGGAGTTCCGATTCGGTGGTGAAGGAAGCGCCGGTTGCTGAGTCGGAGAAGGCGAACTCGGGCGAGTTGAGGGAATCGGTGGCGGAGTCGAAAGGGACGAAGGAGAGTCGGAGTAGCAGTGAGGTTCAGAGCTCGGCGAGTTTGTCGAGAAAATTAGGGCCGGAACTGAAGCCGAGCGAACCGGTCGAACCGGACCAGGAGAACCAATCTCCCGCCATGAATCAGATCCCCGTGGAATCTCAGCCGTTGGTTGATTTCCTCGGGATTCTCCGATCTCACAAGGCCGCTACGTTTTTCGAGCGCCGGCTCCAGTCCCAGGACACATCCATTTATACCAACATGATTCGGCAACATACAGATTTTGAATTGGTGCAAACCAGACTTAATGGAGGTTGGTACTCAAGCTGCAAGAGCAAATTTTTTAGAGATATCTTGCTTATTTGTAAGAATGCCATAGTCTTCTTCGGGAAAAGGGCTCCAGAATACACGGCTGCCTGTGAGCTTCAATTACTTGTTTTAAAGGAGATGGCTCGTAAGGATCGTAATCAAGATCCATCACCTAAACAAGAAACTCATATGCCATCTAAAGAAGAAACGCTGACACTACCAGCTCTACCATTGAAGCCTGAAACTGAATCATCGGAGTCGTTGCTAGCAAAATCAAAACTATCAATTCCATTGACTGCTTGTCGTAAGCGCAGCTCAATAAAGGCCAGAGCATCCACCTCTTCTTCAGCACCAGACATAAAAAAAGAGCAAAAGACTACATTATTGCGTGACGTCAAACCAGCTATAAGTTGGAAGCAAAAAGAAGATTCCTCAGATGAAGTTGAGGAGCAACTTCCTGTCACAAAGAAGAGAAGAAAAGAAAGAGTTGGGAGCAATTCAAGAAACAACTCGAACAAAATTAGCAGGAGCCGAAGTGATACTAAGAAGGAGAAGAATCCAGATGCCAATGCTAATGCAAATGTTGGTTCTTCAACCAGAGCAATGATTAGTAATGAGAATTCAGAGTCCATAGCCGAGATGGATAAAAAGAGCAATAGTACTACAAGTGGGAAAAGGCAAAGTGCAGAAAAATTCTTGAATAGAATGAAGAGGAGCTCTGCATCCAACAACAAATCAGAGACATTGAAAATTCCTGAGAATGATAGCAAAGGTGCAGCAGAGCAGAGAATGAACGGAAACATCAAAGGGAATGCACAGAAAGCAGCAGAGCAGAGAAAAAATGGAAATGGCAAAGGGAGTGCACAGAAAGAAGTAGCAGAGCAGAAGAAAGGTGGCAATGGAAAAGGAAATGCGCAGACAGAACAAGCTTCACGTAGAGGTTCTGGTGGGAGACAGGCTGCGAAAGAGCAAGGAAGCCCCACGAAAAGGAGCGTGGGACGGCCCTCAAAGAGGGCAGCGGAAACAACGAGAGCTGCTCCAGCTAAACGGCGTAGATATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Bromodomain Myb_DNA-binding

Protein Analysis

714

Amino Acids

79.05

Weight (kDa)

9.16

Isoelectric Point (pI)

65.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 25 - 59 3.4e-06 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 467
AatII GACGTC 2 cut(s) 366, 1479
Acc16I TGCGCA 1 cut(s) 1998
AccBSI CCGCTC 3 cut(s) 438, 523, 650
AccI GTMKAC 1 cut(s) 594
AccII CGCG 3 cut(s) 345, 414, 614
AccIII TCCGGA 2 cut(s) 19, 580
AclWI GGATC 5 cut(s) 432, 557, 916, 1241, 1242
AcoI YGGCCR 2 cut(s) 532, 630
AcsI RAATTY 4 cut(s) 1112, 1702, 1775, 1833
AcuI CTGAAG 2 cut(s) 884, 1413
AcyI GRCGYC 4 cut(s) 229, 252, 363, 1476
AfaI GTAC 2 cut(s) 1094, 1744
AfiI CCNNNNNNNGG 7 cut(s) 346, 587, 635, 676, 1012, 2070, 2094
AgeI ACCGGT 2 cut(s) 619, 877
AgsI TTSAA 9 cut(s) 238, 403, 1061, 1202, 1318, 1584, 1677, 1783, 1831
AhdI GACNNNNNGTC 1 cut(s) 1383
AjiI CACGTC 1 cut(s) 84
AjnI CCWGG 2 cut(s) 891, 1011
Alw21I GWGCWC 4 cut(s) 96, 830, 1802, 1948
Alw26I GTCTC 4 cut(s) 370, 381, 1817, 2029
Alw44I GTGCAC 1 cut(s) 1944
AlwI GGATC 5 cut(s) 432, 557, 916, 1241, 1242
Ama87I CYCGRG 2 cut(s) 754, 956
Aor13HI TCCGGA 2 cut(s) 19, 580
AoxI GGCC 6 cut(s) 532, 630, 854, 978, 1407, 2084
ApaLI GTGCAC 1 cut(s) 1944
ApeKI GCWGC 8 cut(s) 1101, 1187, 1395, 1859, 1907, 2042, 2099, 2117
ApoI RAATTY 4 cut(s) 1112, 1702, 1775, 1833
AsiGI ACCGGT 2 cut(s) 619, 877
AspLEI GCGC 8 cut(s) 110, 168, 345, 414, 727, 999, 1395, 1999
AspS9I GGNCC 4 cut(s) 349, 854, 889, 2085
AsuC2I CCSGG 2 cut(s) 637, 671
AsuHPI GGTGA 3 cut(s) 614, 727, 1245
AsuNHI GCTAGC 1 cut(s) 1348
AvaI CYCGRG 2 cut(s) 754, 956
AvaII GGWCC 2 cut(s) 349, 889
BaeGI GKGCMC 1 cut(s) 1948
BanII GRGCYC 4 cut(s) 96, 830, 1174, 1802
BauI CACGAG 1 cut(s) 688
BbsI GAAGAC 1 cut(s) 1147
Bbv12I GWGCWC 4 cut(s) 96, 830, 1802, 1948
BbvI GCAGC 8 cut(s) 1088, 1174, 1407, 1871, 1919, 2029, 2104, 2111
BccI CCATC 6 cut(s) 377, 524, 1216, 1258, 1285, 1717
BceAI ACGGC 8 cut(s) 95, 139, 239, 280, 286, 925, 1200, 2099
BciT130I CCWGG 2 cut(s) 893, 1013
BcnI CCSGG 2 cut(s) 637, 671
BcoDI GTCTC 4 cut(s) 370, 381, 1817, 2029
BfaI CTAG 1 cut(s) 1349
BfoI RGCGCY 2 cut(s) 728, 1000
BmcAI AGTACT 1 cut(s) 1744
Bme1390I CCNGG 4 cut(s) 637, 671, 893, 1013
Bme18I GGWCC 2 cut(s) 349, 889
BmeRI GACNNNNNGTC 1 cut(s) 1383
BmeT110I CYCGRG 2 cut(s) 754, 956
BmgBI CACGTC 1 cut(s) 84
BmgT120I GGNCC 4 cut(s) 349, 854, 889, 2085
BmiI GGNNCC 5 cut(s) 618, 627, 1004, 1173, 1613
BmrFI CCNGG 4 cut(s) 637, 671, 893, 1013
BmsI GCATC 4 cut(s) 293, 1424, 1636, 1814
BmtI GCTAGC 1 cut(s) 1352
BpiI GAAGAC 1 cut(s) 1147
BplI GAGNNNNNCTC 2 cut(s) 2104, 2136
BpmI CTGGAG 3 cut(s) 989, 1158, 2106
BpuEI CTTGAG 1 cut(s) 1081
BpuMI CCSGG 2 cut(s) 637, 671
BsaAI YACGTR 1 cut(s) 2018
BsaBI GATNNNNATC 1 cut(s) 1239
BsaHI GRCGYC 4 cut(s) 229, 252, 363, 1476
BsaJI CCNNGG 5 cut(s) 299, 636, 927, 955, 1011
BsaWI WCCGGW 6 cut(s) 19, 580, 587, 619, 877, 886
BsaXI ACNNNNNCTCC 6 cut(s) 674, 704, 799, 829, 1603, 1633
Bsc4I CCNNNNNNNGG 7 cut(s) 346, 587, 635, 676, 1012, 2070, 2094
Bse118I RCCGGY 6 cut(s) 534, 619, 628, 727, 877, 999
Bse1I ACTGG 1 cut(s) 1006
Bse3DI GCAATG 2 cut(s) 1692, 1987
Bse8I GATNNNNATC 1 cut(s) 1239
BseAI TCCGGA 2 cut(s) 19, 580
BseBI CCWGG 2 cut(s) 893, 1013
BseDI CCNNGG 5 cut(s) 299, 636, 927, 955, 1011
BseGI GGATG 4 cut(s) 284, 1019, 1415, 1805
BseJI GATNNNNATC 1 cut(s) 1239
BseLI CCNNNNNNNGG 7 cut(s) 346, 587, 635, 676, 1012, 2070, 2094
BseMI GCAATG 2 cut(s) 1692, 1987
BseMII CTCAG 7 cut(s) 143, 209, 564, 726, 950, 1530, 1830
BseNI ACTGG 1 cut(s) 1006
BseRI GAGGAG 6 cut(s) 86, 89, 104, 183, 1544, 1810
BseSI GKGCMC 1 cut(s) 1948
BseX3I CGGCCG 1 cut(s) 630
BseXI GCAGC 8 cut(s) 1088, 1174, 1407, 1871, 1919, 2029, 2104, 2111
BseYI CCCAGC 2 cut(s) 135, 153
BsgI GTGCAG 2 cut(s) 1788, 1878
Bsh1236I CGCG 3 cut(s) 345, 414, 614
Bsh1285I CGRYCG 3 cut(s) 633, 654, 882
BshFI GGCC 6 cut(s) 534, 632, 856, 980, 1409, 2086
BshTI ACCGGT 2 cut(s) 619, 877
BsiEI CGRYCG 3 cut(s) 633, 654, 882
BsiHKAI GWGCWC 4 cut(s) 96, 830, 1802, 1948
BsiHKCI CYCGRG 2 cut(s) 754, 956
BslFI GGGAC 4 cut(s) 152, 805, 994, 2094
BslI CCNNNNNNNGG 7 cut(s) 346, 587, 635, 676, 1012, 2070, 2094
BsmAI GTCTC 4 cut(s) 370, 381, 1817, 2029
BsmBI CGTCTC 1 cut(s) 370
BsmFI GGGAC 4 cut(s) 152, 805, 994, 2094
BsmI GAATGC 2 cut(s) 1150, 1900
BsnI GGCC 6 cut(s) 534, 632, 856, 980, 1409, 2086
BsoBI CYCGRG 2 cut(s) 754, 956
Bsp1286I GDGCHC 5 cut(s) 96, 830, 1174, 1802, 1948
Bsp13I TCCGGA 2 cut(s) 19, 580
Bsp143I GATC 9 cut(s) 307, 424, 453, 562, 642, 921, 968, 1234, 1246
Bsp19I CCATGG 1 cut(s) 299
BspANI GGCC 6 cut(s) 534, 632, 856, 980, 1409, 2086
BspCNI CTCAG 7 cut(s) 142, 208, 565, 727, 949, 1529, 1831
BspEI TCCGGA 2 cut(s) 19, 580
BspFNI CGCG 3 cut(s) 345, 414, 614
BspLI GGNNCC 5 cut(s) 618, 627, 1004, 1173, 1613
BspOI GCTAGC 1 cut(s) 1352
BspPI GGATC 5 cut(s) 432, 557, 916, 1241, 1242
BsrBI CCGCTC 3 cut(s) 438, 523, 650
BsrDI GCAATG 2 cut(s) 1692, 1987
BsrFI RCCGGY 6 cut(s) 534, 619, 628, 727, 877, 999
BsrI ACTGG 1 cut(s) 1006
BssAI RCCGGY 6 cut(s) 534, 619, 628, 727, 877, 999
BssECI CCNNGG 5 cut(s) 299, 636, 927, 955, 1011
BssMI GATC 9 cut(s) 307, 424, 453, 562, 642, 921, 968, 1234, 1246
BssNI GRCGYC 4 cut(s) 229, 252, 363, 1476
BssSI CACGAG 1 cut(s) 688
BssT1I CCWWGG 1 cut(s) 299
Bst2BI CACGAG 1 cut(s) 688
Bst2UI CCWGG 2 cut(s) 893, 1013
Bst6I CTCTTC 3 cut(s) 1429, 1547, 1787
BstACI GRCGYC 4 cut(s) 229, 252, 363, 1476
BstBAI YACGTR 1 cut(s) 2018
BstC8I GCNNGC 4 cut(s) 106, 164, 1001, 1350
BstDEI CTNAG 8 cut(s) 129, 195, 573, 735, 936, 1516, 1626, 1839
BstDSI CCRYGG 2 cut(s) 299, 927
BstENI CCTNNNNNAGG 1 cut(s) 2092
BstF5I GGATG 4 cut(s) 284, 1019, 1415, 1805
BstFNI CGCG 3 cut(s) 345, 414, 614
BstH2I RGCGCY 2 cut(s) 728, 1000
BstHHI GCGC 8 cut(s) 110, 168, 345, 414, 727, 999, 1395, 1999
BstKTI GATC 9 cut(s) 310, 427, 456, 565, 645, 924, 971, 1237, 1249
BstMAI GTCTC 4 cut(s) 370, 381, 1817, 2029
BstMBI GATC 9 cut(s) 307, 424, 453, 562, 642, 921, 968, 1234, 1246
BstMCI CGRYCG 3 cut(s) 633, 654, 882
BstMWI GCNNNNNNNGC 6 cut(s) 132, 163, 731, 1107, 1904, 2123
BstNI CCWGG 2 cut(s) 893, 1013
BstSCI CCNGG 4 cut(s) 635, 669, 891, 1011
BstSLI GKGCMC 1 cut(s) 1948
BstUI CGCG 3 cut(s) 345, 414, 614
BstV1I GCAGC 8 cut(s) 1088, 1174, 1407, 1871, 1919, 2029, 2104, 2111
BstV2I GAAGAC 1 cut(s) 1147
BstX2I RGATCY 4 cut(s) 424, 562, 921, 1246
BstYI RGATCY 4 cut(s) 424, 562, 921, 1246
BstZI CGGCCG 1 cut(s) 630
BsuRI GGCC 6 cut(s) 534, 632, 856, 980, 1409, 2086
BtgI CCRYGG 2 cut(s) 299, 927
BtrI CACGTC 1 cut(s) 84
BtsCI GGATG 4 cut(s) 284, 1019, 1415, 1805
BtsI GCAGTG 1 cut(s) 820
BtsIMutI CAGTG 1 cut(s) 820
Cac8I GCNNGC 4 cut(s) 106, 164, 1001, 1350
CfoI GCGC 8 cut(s) 110, 168, 345, 414, 727, 999, 1395, 1999
Cfr10I RCCGGY 6 cut(s) 534, 619, 628, 727, 877, 999
Cfr13I GGNCC 4 cut(s) 349, 854, 889, 2085
CseI GACGC 4 cut(s) 237, 260, 605, 620
Csp6I GTAC 2 cut(s) 1093, 1743
CspAI ACCGGT 2 cut(s) 619, 877
CviAII CATG 4 cut(s) 75, 300, 913, 1036
CviQI GTAC 2 cut(s) 1093, 1743
DdeI CTNAG 8 cut(s) 129, 195, 573, 735, 936, 1516, 1626, 1839
DpnI GATC 9 cut(s) 309, 426, 455, 564, 644, 923, 970, 1236, 1248
DpnII GATC 9 cut(s) 307, 424, 453, 562, 642, 921, 968, 1234, 1246
DraI TTTAAA 1 cut(s) 1215
DrdI GACNNNNNNGTC 1 cut(s) 467
DriI GACNNNNNGTC 1 cut(s) 1383
DseDI GACNNNNNNGTC 1 cut(s) 467
EaeI YGGCCR 2 cut(s) 532, 630
EagI CGGCCG 1 cut(s) 630
Eam1104I CTCTTC 3 cut(s) 1429, 1547, 1787
Eam1105I GACNNNNNGTC 1 cut(s) 1383
EarI CTCTTC 3 cut(s) 1429, 1547, 1787
EciI GGCGGA 1 cut(s) 794
Ecl136II GAGCTC 3 cut(s) 94, 828, 1800
EclXI CGGCCG 1 cut(s) 630
Eco130I CCWWGG 1 cut(s) 299
Eco24I GRGCYC 4 cut(s) 96, 830, 1174, 1802
Eco32I GATATC 1 cut(s) 1126
Eco47I GGWCC 2 cut(s) 349, 889
Eco52I CGGCCG 1 cut(s) 630
Eco53kI GAGCTC 3 cut(s) 94, 828, 1800
Eco57I CTGAAG 2 cut(s) 884, 1413
Eco88I CYCGRG 2 cut(s) 754, 956
EcoICRI GAGCTC 3 cut(s) 94, 828, 1800
EcoNI CCTNNNNNAGG 1 cut(s) 2092
EcoRI GAATTC 1 cut(s) 1702
EcoRII CCWGG 2 cut(s) 891, 1011
EcoRV GATATC 1 cut(s) 1126
EcoT14I CCWWGG 1 cut(s) 299
EcoT38I GRGCYC 4 cut(s) 96, 830, 1174, 1802
ErhI CCWWGG 1 cut(s) 299
Esp3I CGTCTC 1 cut(s) 370
FaeI CATG 4 cut(s) 78, 303, 916, 1039
FaqI GGGAC 4 cut(s) 152, 805, 994, 2094
FatI CATG 4 cut(s) 74, 299, 912, 1035
FauI CCCGC 1 cut(s) 916
FauNDI CATATG 1 cut(s) 1272
FblI GTMKAC 1 cut(s) 594
FokI GGATG 4 cut(s) 271, 1006, 1402, 1792
FriOI GRGCYC 4 cut(s) 96, 830, 1174, 1802
FspBI CTAG 1 cut(s) 1349
FspI TGCGCA 1 cut(s) 1998
GlaI GCGC 8 cut(s) 109, 167, 344, 413, 726, 998, 1394, 1998
GsaI CCCAGC 2 cut(s) 139, 157
GsuI CTGGAG 3 cut(s) 989, 1158, 2106
HaeII RGCGCY 2 cut(s) 728, 1000
HaeIII GGCC 6 cut(s) 534, 632, 856, 980, 1409, 2086
HgaI GACGC 4 cut(s) 237, 260, 605, 620
HhaI GCGC 8 cut(s) 110, 168, 345, 414, 727, 999, 1395, 1999
Hin1I GRCGYC 4 cut(s) 229, 252, 363, 1476
Hin1II CATG 4 cut(s) 78, 303, 916, 1039
Hin6I GCGC 8 cut(s) 108, 166, 343, 412, 725, 997, 1393, 1997
HinP1I GCGC 8 cut(s) 108, 166, 343, 412, 725, 997, 1393, 1997
HincII GTYRAC 1 cut(s) 595
HindII GTYRAC 1 cut(s) 595
HindIII AAGCTT 1 cut(s) 2010
HphI GGTGA 3 cut(s) 614, 727, 1245
Hpy166II GTNNAC 3 cut(s) 115, 595, 1946
Hpy8I GTNNAC 3 cut(s) 115, 595, 1946
HpyAV CCTTC 5 cut(s) 382, 712, 739, 790, 1624
HpyCH4IV ACGT 5 cut(s) 83, 363, 986, 1476, 2017
HpyF10VI GCNNNNNNNGC 6 cut(s) 132, 163, 731, 1107, 1904, 2123
HpyF3I CTNAG 8 cut(s) 129, 195, 573, 735, 936, 1516, 1626, 1839
HpySE526I ACGT 5 cut(s) 83, 363, 986, 1476, 2017
Hsp92I GRCGYC 4 cut(s) 229, 252, 363, 1476
Hsp92II CATG 4 cut(s) 78, 303, 916, 1039
HspAI GCGC 8 cut(s) 108, 166, 343, 412, 725, 997, 1393, 1997
Kpn2I TCCGGA 2 cut(s) 19, 580
KroI GCCGGC 1 cut(s) 999
KroNI GCCGGC 1 cut(s) 1001
Kzo9I GATC 9 cut(s) 307, 424, 453, 562, 642, 921, 968, 1234, 1246
Lsp1109I GCAGC 8 cut(s) 1088, 1174, 1407, 1871, 1919, 2029, 2104, 2111
LweI GCATC 4 cut(s) 293, 1424, 1636, 1814
MaeI CTAG 1 cut(s) 1349
MaeII ACGT 5 cut(s) 83, 363, 986, 1476, 2017
MaeIII GTNAC 3 cut(s) 665, 1472, 1543
MalI GATC 9 cut(s) 309, 426, 455, 564, 644, 923, 970, 1236, 1248
MbiI CCGCTC 3 cut(s) 438, 523, 650
MboI GATC 9 cut(s) 307, 424, 453, 562, 642, 921, 968, 1234, 1246
MflI RGATCY 4 cut(s) 424, 562, 921, 1246
MhlI GDGCHC 5 cut(s) 96, 830, 1174, 1802, 1948
MlyI GAGTC 8 cut(s) 134, 600, 680, 746, 791, 811, 1349, 1718
MmeI TCCRAC 9 cut(s) 198, 250, 376, 384, 576, 720, 785, 1475, 1833
MroI TCCGGA 2 cut(s) 19, 580
MroNI GCCGGC 1 cut(s) 999
MseI TTAA 2 cut(s) 1080, 1214
MspA1I CMGCKG 1 cut(s) 2102
MspR9I CCNGG 4 cut(s) 637, 671, 893, 1013
Mva1269I GAATGC 2 cut(s) 1150, 1900
MvaI CCWGG 2 cut(s) 893, 1013
MvnI CGCG 3 cut(s) 345, 414, 614
MwoI GCNNNNNNNGC 6 cut(s) 132, 163, 731, 1107, 1904, 2123
NaeI GCCGGC 1 cut(s) 1001
NciI CCSGG 2 cut(s) 637, 671
NcoI CCATGG 1 cut(s) 299
NdeI CATATG 1 cut(s) 1272
NdeII GATC 9 cut(s) 307, 424, 453, 562, 642, 921, 968, 1234, 1246
NgoMIV GCCGGC 1 cut(s) 999
NheI GCTAGC 1 cut(s) 1348
NlaIII CATG 4 cut(s) 78, 303, 916, 1039
NlaIV GGNNCC 5 cut(s) 618, 627, 1004, 1173, 1613
NmeAIII GCCGAG 4 cut(s) 529, 809, 894, 1744
NmuCI GTSAC 2 cut(s) 1472, 1543
NsbI TGCGCA 1 cut(s) 1998
PcsI WCGNNNNNNNCGW 8 cut(s) 108, 258, 270, 369, 651, 746, 791, 1234
PctI GAATGC 2 cut(s) 1150, 1900
PdiI GCCGGC 1 cut(s) 1001
PflFI GACNNNGTC 1 cut(s) 143
PinAI ACCGGT 2 cut(s) 619, 877
PleI GAGTC 8 cut(s) 134, 599, 680, 745, 790, 810, 1348, 1717
PpsI GAGTC 8 cut(s) 134, 599, 680, 745, 790, 810, 1348, 1717
Ppu21I YACGTR 1 cut(s) 2018
Psp124BI GAGCTC 3 cut(s) 96, 830, 1802
Psp6I CCWGG 2 cut(s) 891, 1011
PspFI CCCAGC 2 cut(s) 135, 153
PspGI CCWGG 2 cut(s) 891, 1011
PspN4I GGNNCC 5 cut(s) 618, 627, 1004, 1173, 1613
PspPI GGNCC 4 cut(s) 349, 854, 889, 2085
PsrI GAACNNNNNNTAC 2 cut(s) 685, 717
PsuI RGATCY 4 cut(s) 424, 562, 921, 1246
PsyI GACNNNGTC 1 cut(s) 143
RsaI GTAC 2 cut(s) 1094, 1744
RsaNI GTAC 2 cut(s) 1093, 1743
SacI GAGCTC 3 cut(s) 96, 830, 1802
SalI GTCGAC 1 cut(s) 593
SaqAI TTAA 2 cut(s) 1080, 1214
Sau3AI GATC 9 cut(s) 307, 424, 453, 562, 642, 921, 968, 1234, 1246
Sau96I GGNCC 4 cut(s) 349, 854, 889, 2085
ScaI AGTACT 1 cut(s) 1744
SchI GAGTC 8 cut(s) 134, 600, 680, 746, 791, 811, 1349, 1718
ScrFI CCNGG 4 cut(s) 637, 671, 893, 1013
SduI GDGCHC 5 cut(s) 96, 830, 1174, 1802, 1948
SfaNI GCATC 4 cut(s) 293, 1424, 1636, 1814
SinI GGWCC 2 cut(s) 349, 889
SmlI CTYRAG 1 cut(s) 1096
SmoI CTYRAG 1 cut(s) 1096
SspMI CTAG 1 cut(s) 1349
SstI GAGCTC 3 cut(s) 96, 830, 1802
StyD4I CCNGG 4 cut(s) 635, 669, 891, 1011
StyI CCWWGG 1 cut(s) 299
TaiI ACGT 5 cut(s) 86, 366, 989, 1479, 2020
TatI WGTACW 1 cut(s) 1742
TauI GCSGC 4 cut(s) 152, 234, 635, 983
Tru1I TTAA 2 cut(s) 1080, 1214
Tru9I TTAA 2 cut(s) 1080, 1214
TscAI CASTG 1 cut(s) 820
TseFI GTSAC 2 cut(s) 1472, 1543
TseI GCWGC 8 cut(s) 1101, 1187, 1395, 1859, 1907, 2042, 2099, 2117
Tsp45I GTSAC 2 cut(s) 1472, 1543
TspDTI ATGAA 5 cut(s) 348, 929, 1536, 1805, 1889
TspGWI ACGGA 3 cut(s) 133, 457, 1893
TspRI CASTG 1 cut(s) 820
Tth111I GACNNNGTC 1 cut(s) 143
VneI GTGCAC 1 cut(s) 1944
VpaK11BI GGWCC 2 cut(s) 349, 889
XagI CCTNNNNNAGG 1 cut(s) 2092
XapI RAATTY 4 cut(s) 1112, 1702, 1775, 1833
XcmI CCANNNNNNNNNTGG 2 cut(s) 1491, 1720
XmiI GTMKAC 1 cut(s) 594
XspI CTAG 1 cut(s) 1349
ZraI GACGTC 2 cut(s) 364, 1477
ZrmI AGTACT 1 cut(s) 1744
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.