Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0009498

Physical Location & Seq

Genomic Coordinates Reverse (-)

7730358 .. 7745222

Gene Structure 14865 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1066100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

ATGGAGCCTCTCTGCCCAAACATGGATCTCAAATCAGCATCTTTCCCACCAATTTCAGCAAGATTCGTGAAACCCATTTCACTTTCACTGCACTCTCATCGGTTTTCGTGCTCGGATCGCCGGGTGGCTAAGAAATGGAGGGTGTCTGTTGTCAATGCAAACTCTGAAGCCAAGTTTTCGAGTCAGGAGTTGGTGAGGACAATTGGAAAGGGGTTGCTTTCATTTGCCGCTGCCGTTGCTGCAAATTATGCTGTTGTTTGTTGTAACTATCCGGCGATGGCGGAGTCTCTGACGGTGGCTTTTCCGGCGTCACGCACTACTGAGGTGAATTCGGTTCAAACAACTCTTGTGGAGACTTGGGGTTTGATTAGGGAAACATTCGTAGACCCGACATTTAATCATCAAGATTGGGATCAAAAGTTGCAGCAAACAATGACGGAAATGTTTCCCCTTAGGTCTGCTGATGCAGCATATATGAAAATCAGTGGAATGCTATCTACTCTTGGTGATCCCTTTACACGGATCATCAGTCCCAAGGAATATCAAAGTTTTCGGATTGGAAGCAATGGAAATCTACAAGGAGTTGGCCTTTTCATAAATAGGGAACCCAGAACAGGCCATTTGGTTGTTTTGTCTTGTGTAGAGGGTGGCCCAGCTGCTCGTGCTGGTATACATCAAGGAGATGAGTTGGTTGAAATTAATGGAGAGAAGATGGATGGTATTGAGACTGAAGTAGCCGTGCAGAAACTTAGAGGTCGAGTTGGAACAACTGTTACAGTAAAAGTTCATAGAGGAAATGATATCAGAGGCGATTCTGGAATAAAAGAGGTAAAACTACCTCGTGAGTACATTAAGCTTTCCCCGATTTCAACTGCTACCATCCCTCATAAAACCCCAGATGGACGTCTAACCAAAACAGGTTATGTGAAATTGTCAGCATTTTCTCAGACCGCTGCAGCTGATATGGAAAATGCTATTAACGAAATGAAGAGGCAGGGTGTACACTCATACATACTGGATTTACGAAACAATCCGGGAGGACTGGTAAAAGCAGGACTTGACGTTGCCCAAATTTGGCTAGATGGGGATGAAACCCTAGTGAATACTATCGATCGAGAAGGGAACTTGTTACCTATAAACATGGTCAATGGGCATGCTATAACGCATGATCCACTTGTTGTGCTTGTTAACGAGGGCAGCGCGAGTGCAAGTGAGATTCTGGCAGGGGCACTACATGATAATCGTCGAGCCACTCTTGTGGGGCACAGAACCTTCGGAAAAGGAAAAATCCAGAGTGTCACAGAGTTGCATGATGGATCAGCTTTATTTGTCACGGTGGCCAAATACTTATCTCCGGCGCTTCATGACATAGACCAGGTTGGCATTGCACCTGATGTTCAATGCACAACTGAAATGCTCAATTCTCCCAATTCAGTCTCATCATCTCTAGAAGCAGATTCATGTGTCTTGGTAGCAGAACACGAATTGGACATTCAGGAATCCAAAGGCACTGCTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0005575 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0016020 GO:0016787 GO:0019538 GO:0043170 GO:0044238 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PDZ PDZ_2 Peptidase_S41

Protein Analysis

507

Amino Acids

54.81

Weight (kDa)

6.22

Isoelectric Point (pI)

33.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PDZ	PF00595	193 - 262	9.4e-10	PDZ domain
PDZ_2	PF13180	202 - 267	7.2e-09	PDZ domain
PDZ_6	PF17820	210 - 264	2e-09	PDZ domain
Peptidase_S41	PF03572	305 - 467	1.5e-50	Peptidase family S41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009498)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G57680 AT3G57680 AT3G57680
fragaria_vesca	FvH4_6g23140 FvH4_6g23140 FvH4_6g23140 FvH4_6g23140 FvH4_6g23140
malus_domestica	MD12G1066100.v1.1 MD14G1066000.v1.1
prunus_persica	Prupe.7G068000_v2.0.a1
pyrus_communis	pycom12g05770 pycom14g05370
rosa_chinensis	RchiOBHm_Chr3g0480991
rosa_laevigata	RLG00000023435
rosa_multiflora	Rmu_sc0002927.1_g000022
rosa_roxburghii	Rroxscaffold_6G00400770
rosa_rugosa	Rorug03G0188700
rosa_samantha	Rh3AG239500 Rh3CG269500 Rh3DG265500
rosa_wichuraiana	Rw0G018670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	907
AccI	GTMKAC	2 cut(s)	384, 670
AccII	CGCG	1 cut(s)	1202
AciI	CCGC	3 cut(s)	228, 281, 951
AclWI	GGATC	7 cut(s)	33, 123, 420, 503, 530, 1163, 1324
AcoI	YGGCCR	1 cut(s)	1338
AcsI	RAATTY	2 cut(s)	328, 1071
AcuI	CTGAAG	2 cut(s)	186, 750
AcyI	GRCGYC	2 cut(s)	308, 904
AfaI	GTAC	2 cut(s)	848, 1002
AfiI	CCNNNNNNNGG	4 cut(s)	22, 519, 614, 1074
AgsI	TTSAA	4 cut(s)	338, 695, 870, 1400
AjnI	CCWGG	1 cut(s)	1374
AleI	CACNNNNGTG	1 cut(s)	1256
AluBI	AGCT	4 cut(s)	656, 856, 959, 1322
AluI	AGCT	4 cut(s)	656, 856, 959, 1322
Alw21I	GWGCWC	1 cut(s)	113
Alw26I	GTCTC	4 cut(s)	291, 347, 719, 1441
AlwI	GGATC	7 cut(s)	33, 123, 420, 503, 530, 1163, 1324
AoxI	GGCC	4 cut(s)	586, 616, 649, 1338
ApeKI	GCWGC	8 cut(s)	230, 239, 424, 467, 656, 953, 956, 1197
ApoI	RAATTY	2 cut(s)	328, 1071
ArsI	GACNNNNNNTTYG	2 cut(s)	346, 378
AseI	ATTAAT	1 cut(s)	699
Asp700I	GAANNNNTTC	1 cut(s)	444
AspLEI	GCGC	2 cut(s)	1202, 1360
AspS9I	GGNCC	1 cut(s)	650
AsuC2I	CCSGG	2 cut(s)	122, 1035
AsuHPI	GGTGA	3 cut(s)	205, 337, 518
AxyI	CCTNAGG	1 cut(s)	452
BaeGI	GKGCMC	2 cut(s)	1231, 1266
BalI	TGGCCA	1 cut(s)	1340
BauI	CACGAG	2 cut(s)	660, 840
Bbv12I	GWGCWC	1 cut(s)	113
BbvI	GCAGC	8 cut(s)	217, 226, 436, 479, 643, 940, 968, 1209
BccI	CCATC	7 cut(s)	271, 706, 710, 887, 893, 1076, 1307
BceAI	ACGGC	2 cut(s)	218, 722
BcgI	CGANNNNNNTGC	2 cut(s)	80, 114
BciT130I	CCWGG	1 cut(s)	1376
BcnI	CCSGG	2 cut(s)	122, 1035
BcoDI	GTCTC	4 cut(s)	291, 347, 719, 1441
BfaI	CTAG	3 cut(s)	1079, 1097, 1448
BfmI	CTRYAG	1 cut(s)	954
BfoI	RGCGCY	1 cut(s)	1361
BisI	GCNGC	9 cut(s)	228, 231, 240, 425, 468, 657, 954, 957, 1198
BlsI	GCNGC	9 cut(s)	229, 232, 241, 426, 469, 658, 955, 958, 1199
Bme1390I	CCNGG	3 cut(s)	122, 1035, 1376
BmgT120I	GGNCC	1 cut(s)	650
BmiI	GGNNCC	2 cut(s)	6, 606
BmrFI	CCNGG	3 cut(s)	122, 1035, 1376
BmsI	GCATC	2 cut(s)	47, 454
BpuMI	CCSGG	2 cut(s)	122, 1035
Bsa29I	ATCGAT	1 cut(s)	1110
BsaBI	GATNNNNATC	1 cut(s)	411
BsaHI	GRCGYC	2 cut(s)	308, 904
BsaJI	CCNNGG	1 cut(s)	534
BsaXI	ACNNNNNCTCC	2 cut(s)	1029, 1059
Bsc4I	CCNNNNNNNGG	4 cut(s)	22, 519, 614, 1074
Bse1I	ACTGG	2 cut(s)	1020, 1047
Bse21I	CCTNAGG	1 cut(s)	452
Bse3DI	GCAATG	2 cut(s)	571, 1383
Bse8I	GATNNNNATC	1 cut(s)	411
BseBI	CCWGG	1 cut(s)	1376
BseCI	ATCGAT	1 cut(s)	1110
BseDI	CCNNGG	1 cut(s)	534
BseGI	GGATG	3 cut(s)	721, 879, 1093
BseJI	GATNNNNATC	1 cut(s)	411
BseLI	CCNNNNNNNGG	4 cut(s)	22, 519, 614, 1074
BseMI	GCAATG	2 cut(s)	571, 1383
BseMII	CTCAG	2 cut(s)	312, 959
BseNI	ACTGG	2 cut(s)	1020, 1047
BseSI	GKGCMC	2 cut(s)	1231, 1266
BseXI	GCAGC	8 cut(s)	217, 226, 436, 479, 643, 940, 968, 1209
BseYI	CCCAGC	1 cut(s)	652
BsgI	GTGCAG	2 cut(s)	74, 761
Bsh1236I	CGCG	1 cut(s)	1202
Bsh1285I	CGRYCG	1 cut(s)	1114
BshFI	GGCC	4 cut(s)	588, 618, 651, 1340
BshVI	ATCGAT	1 cut(s)	1110
BsiEI	CGRYCG	1 cut(s)	1114
BsiHKAI	GWGCWC	1 cut(s)	113
BsiSI	CCGG	5 cut(s)	121, 272, 305, 1034, 1355
BslFI	GGGAC	1 cut(s)	516
BslI	CCNNNNNNNGG	4 cut(s)	22, 519, 614, 1074
BsmAI	GTCTC	4 cut(s)	291, 347, 719, 1441
BsmFI	GGGAC	1 cut(s)	516
BsmI	GAATGC	1 cut(s)	495
BsnI	GGCC	4 cut(s)	588, 618, 651, 1340
Bsp1286I	GDGCHC	3 cut(s)	113, 1231, 1266
Bsp1407I	TGTACA	1 cut(s)	1000
Bsp143I	GATC	8 cut(s)	25, 115, 412, 508, 522, 1111, 1168, 1316
BspACI	CCGC	3 cut(s)	228, 281, 951
BspANI	GGCC	4 cut(s)	588, 618, 651, 1340
BspCNI	CTCAG	2 cut(s)	313, 958
BspDI	ATCGAT	1 cut(s)	1110
BspFNI	CGCG	1 cut(s)	1202
BspHI	TCATGA	1 cut(s)	1363
BspLI	GGNNCC	2 cut(s)	6, 606
BspMAI	CTGCAG	1 cut(s)	958
BspPI	GGATC	7 cut(s)	33, 123, 420, 503, 530, 1163, 1324
BsrDI	GCAATG	2 cut(s)	571, 1383
BsrGI	TGTACA	1 cut(s)	1000
BsrI	ACTGG	2 cut(s)	1020, 1047
BssECI	CCNNGG	1 cut(s)	534
BssMI	GATC	8 cut(s)	25, 115, 412, 508, 522, 1111, 1168, 1316
BssNAI	GTATAC	1 cut(s)	671
BssNI	GRCGYC	2 cut(s)	308, 904
BssSI	CACGAG	2 cut(s)	660, 840
BssT1I	CCWWGG	1 cut(s)	534
Bst1107I	GTATAC	1 cut(s)	671
Bst2BI	CACGAG	2 cut(s)	660, 840
Bst2UI	CCWGG	1 cut(s)	1376
Bst4CI	ACNGT	4 cut(s)	295, 772, 778, 1336
Bst6I	CTCTTC	1 cut(s)	983
BstACI	GRCGYC	2 cut(s)	308, 904
BstAPI	GCANNNNNTGC	1 cut(s)	248
BstAUI	TGTACA	1 cut(s)	1000
BstC8I	GCNNGC	1 cut(s)	1155
BstDEI	CTNAG	5 cut(s)	129, 321, 452, 749, 945
BstF5I	GGATG	3 cut(s)	721, 879, 1093
BstFNI	CGCG	1 cut(s)	1202
BstH2I	RGCGCY	1 cut(s)	1361
BstHHI	GCGC	2 cut(s)	1202, 1360
BstKTI	GATC	8 cut(s)	28, 118, 415, 511, 525, 1114, 1171, 1319
BstMAI	GTCTC	4 cut(s)	291, 347, 719, 1441
BstMBI	GATC	8 cut(s)	25, 115, 412, 508, 522, 1111, 1168, 1316
BstMCI	CGRYCG	1 cut(s)	1114
BstMWI	GCNNNNNNNGC	7 cut(s)	117, 236, 239, 248, 305, 467, 662
BstNI	CCWGG	1 cut(s)	1376
BstNSI	RCATGY	1 cut(s)	1157
BstSCI	CCNGG	3 cut(s)	120, 1033, 1374
BstSFI	CTRYAG	1 cut(s)	954
BstSLI	GKGCMC	2 cut(s)	1231, 1266
BstUI	CGCG	1 cut(s)	1202
BstV1I	GCAGC	8 cut(s)	217, 226, 436, 479, 643, 940, 968, 1209
BstX2I	RGATCY	1 cut(s)	25
BstXI	CCANNNNNNTGG	1 cut(s)	1258
BstYI	RGATCY	1 cut(s)	25
BstZ17I	GTATAC	1 cut(s)	671
Bsu15I	ATCGAT	1 cut(s)	1110
Bsu36I	CCTNAGG	1 cut(s)	452
BsuRI	GGCC	4 cut(s)	588, 618, 651, 1340
BsuTUI	ATCGAT	1 cut(s)	1110
BtgZI	GCGATG	1 cut(s)	290
BtsCI	GGATG	3 cut(s)	721, 879, 1093
BtsI	GCAGTG	2 cut(s)	86, 1509
BtsIMutI	CAGTG	3 cut(s)	86, 490, 1509
Cac8I	GCNNGC	1 cut(s)	1155
CciI	TCATGA	1 cut(s)	1363
CfoI	GCGC	2 cut(s)	1202, 1360
Cfr13I	GGNCC	1 cut(s)	650
ClaI	ATCGAT	1 cut(s)	1110
CseI	GACGC	1 cut(s)	297
CsiI	ACCWGGT	1 cut(s)	1374
Csp6I	GTAC	2 cut(s)	847, 1001
CspCI	CAANNNNNGTGG	2 cut(s)	330, 365
CviAII	CATG	8 cut(s)	22, 1141, 1154, 1166, 1235, 1310, 1364, 1461
CviQI	GTAC	2 cut(s)	847, 1001
DdeI	CTNAG	5 cut(s)	129, 321, 452, 749, 945
DpnI	GATC	8 cut(s)	27, 117, 414, 510, 524, 1113, 1170, 1318
DpnII	GATC	8 cut(s)	25, 115, 412, 508, 522, 1111, 1168, 1316
EaeI	YGGCCR	1 cut(s)	1338
Eam1104I	CTCTTC	1 cut(s)	983
EarI	CTCTTC	1 cut(s)	983
EciI	GGCGGA	1 cut(s)	296
Eco130I	CCWWGG	1 cut(s)	534
Eco32I	GATATC	1 cut(s)	802
Eco57I	CTGAAG	2 cut(s)	186, 750
Eco81I	CCTNAGG	1 cut(s)	452
EcoRI	GAATTC	1 cut(s)	328
EcoRII	CCWGG	1 cut(s)	1374
EcoRV	GATATC	1 cut(s)	802
EcoT14I	CCWWGG	1 cut(s)	534
ErhI	CCWWGG	1 cut(s)	534
FaeI	CATG	8 cut(s)	25, 1144, 1157, 1169, 1238, 1313, 1367, 1464
FalI	AAGNNNNNCTT	2 cut(s)	1041, 1073
FaqI	GGGAC	1 cut(s)	516
FatI	CATG	8 cut(s)	21, 1140, 1153, 1165, 1234, 1309, 1363, 1460
FblI	GTMKAC	2 cut(s)	384, 670
Fnu4HI	GCNGC	9 cut(s)	228, 231, 240, 425, 468, 657, 954, 957, 1198
FokI	GGATG	3 cut(s)	728, 866, 1100
Fsp4HI	GCNGC	9 cut(s)	228, 231, 240, 425, 468, 657, 954, 957, 1198
FspBI	CTAG	3 cut(s)	1079, 1097, 1448
GlaI	GCGC	2 cut(s)	1201, 1359
GluI	GCNGC	9 cut(s)	228, 231, 240, 425, 468, 657, 954, 957, 1198
GsaI	CCCAGC	1 cut(s)	656
HaeII	RGCGCY	1 cut(s)	1361
HaeIII	GGCC	4 cut(s)	588, 618, 651, 1340
HapII	CCGG	5 cut(s)	121, 272, 305, 1034, 1355
HgaI	GACGC	1 cut(s)	297
HhaI	GCGC	2 cut(s)	1202, 1360
Hin1I	GRCGYC	2 cut(s)	308, 904
Hin1II	CATG	8 cut(s)	25, 1144, 1157, 1169, 1238, 1313, 1367, 1464
Hin6I	GCGC	2 cut(s)	1200, 1358
HinP1I	GCGC	2 cut(s)	1200, 1358
HincII	GTYRAC	1 cut(s)	1189
HindII	GTYRAC	1 cut(s)	1189
HindIII	AAGCTT	1 cut(s)	854
HinfI	GANTC	7 cut(s)	63, 181, 284, 812, 1216, 1457, 1499
HpaI	GTTAAC	1 cut(s)	1189
HpaII	CCGG	5 cut(s)	121, 272, 305, 1034, 1355
HphI	GGTGA	3 cut(s)	205, 337, 518
Hpy166II	GTNNAC	5 cut(s)	385, 671, 1001, 1003, 1189
Hpy188I	TCNGA	7 cut(s)	115, 166, 291, 555, 806, 948, 1277
Hpy8I	GTNNAC	5 cut(s)	385, 671, 1001, 1003, 1189
Hpy99I	CGWCG	1 cut(s)	1248
HpyAV	CCTTC	2 cut(s)	1112, 1282
HpyCH4III	ACNGT	4 cut(s)	295, 772, 778, 1336
HpyCH4IV	ACGT	2 cut(s)	904, 1062
HpyF10VI	GCNNNNNNNGC	7 cut(s)	117, 236, 239, 248, 305, 467, 662
HpyF3I	CTNAG	5 cut(s)	129, 321, 452, 749, 945
HpySE526I	ACGT	2 cut(s)	904, 1062
Hsp92I	GRCGYC	2 cut(s)	308, 904
Hsp92II	CATG	8 cut(s)	25, 1144, 1157, 1169, 1238, 1313, 1367, 1464
HspAI	GCGC	2 cut(s)	1200, 1358
KspAI	GTTAAC	1 cut(s)	1189
Kzo9I	GATC	8 cut(s)	25, 115, 412, 508, 522, 1111, 1168, 1316
LmnI	GCTCC	1 cut(s)	4
Lsp1109I	GCAGC	8 cut(s)	217, 226, 436, 479, 643, 940, 968, 1209
LweI	GCATC	2 cut(s)	47, 454
MabI	ACCWGGT	1 cut(s)	1374
MaeI	CTAG	3 cut(s)	1079, 1097, 1448
MaeII	ACGT	2 cut(s)	904, 1062
MaeIII	GTNAC	6 cut(s)	263, 309, 772, 1128, 1297, 1330
MalI	GATC	8 cut(s)	27, 117, 414, 510, 524, 1113, 1170, 1318
MboI	GATC	8 cut(s)	25, 115, 412, 508, 522, 1111, 1168, 1316
MboII	GAAGA	2 cut(s)	721, 1000
MfeI	CAATTG	1 cut(s)	201
MflI	RGATCY	1 cut(s)	25
MhlI	GDGCHC	3 cut(s)	113, 1231, 1266
MlsI	TGGCCA	1 cut(s)	1340
MluNI	TGGCCA	1 cut(s)	1340
MlyI	GAGTC	2 cut(s)	190, 293
MmeI	TCCRAC	1 cut(s)	742
Mox20I	TGGCCA	1 cut(s)	1340
MroXI	GAANNNNTTC	1 cut(s)	444
MscI	TGGCCA	1 cut(s)	1340
MseI	TTAA	5 cut(s)	396, 699, 852, 978, 1188
MslI	CAYNNNNRTG	1 cut(s)	1256
Msp20I	TGGCCA	1 cut(s)	1340
MspA1I	CMGCKG	4 cut(s)	230, 656, 953, 959
MspI	CCGG	5 cut(s)	121, 272, 305, 1034, 1355
MspR9I	CCNGG	3 cut(s)	122, 1035, 1376
MunI	CAATTG	1 cut(s)	201
Mva1269I	GAATGC	1 cut(s)	495
MvaI	CCWGG	1 cut(s)	1376
MvnI	CGCG	1 cut(s)	1202
MwoI	GCNNNNNNNGC	7 cut(s)	117, 236, 239, 248, 305, 467, 662
NciI	CCSGG	2 cut(s)	122, 1035
NdeII	GATC	8 cut(s)	25, 115, 412, 508, 522, 1111, 1168, 1316
NlaIII	CATG	8 cut(s)	25, 1144, 1157, 1169, 1238, 1313, 1367, 1464
NlaIV	GGNNCC	2 cut(s)	6, 606
NmuCI	GTSAC	3 cut(s)	309, 1297, 1330
NspI	RCATGY	1 cut(s)	1157
OliI	CACNNNNGTG	1 cut(s)	1256
PaeI	GCATGC	1 cut(s)	1157
PagI	TCATGA	1 cut(s)	1363
PctI	GAATGC	1 cut(s)	495
PdmI	GAANNNNTTC	1 cut(s)	444
PfeI	GAWTC	5 cut(s)	63, 812, 1216, 1457, 1499
PfoI	TCCNGGA	1 cut(s)	1033
PkrI	GCNGC	9 cut(s)	229, 232, 241, 426, 469, 658, 955, 958, 1199
Ple19I	CGATCG	1 cut(s)	1114
PleI	GAGTC	2 cut(s)	189, 292
PpsI	GAGTC	2 cut(s)	189, 292
PshBI	ATTAAT	1 cut(s)	699
Psp6I	CCWGG	1 cut(s)	1374
PspFI	CCCAGC	1 cut(s)	652
PspGI	CCWGG	1 cut(s)	1374
PspN4I	GGNNCC	2 cut(s)	6, 606
PspPI	GGNCC	1 cut(s)	650
PsrI	GAACNNNNNNTAC	2 cut(s)	757, 789
PstI	CTGCAG	1 cut(s)	958
PsuI	RGATCY	1 cut(s)	25
PvuI	CGATCG	1 cut(s)	1114
PvuII	CAGCTG	2 cut(s)	656, 959
RsaI	GTAC	2 cut(s)	848, 1002
RsaNI	GTAC	2 cut(s)	847, 1001
RseI	CAYNNNNRTG	1 cut(s)	1256
SaqAI	TTAA	5 cut(s)	396, 699, 852, 978, 1188
SatI	GCNGC	9 cut(s)	228, 231, 240, 425, 468, 657, 954, 957, 1198
Sau3AI	GATC	8 cut(s)	25, 115, 412, 508, 522, 1111, 1168, 1316
Sau96I	GGNCC	1 cut(s)	650
SchI	GAGTC	2 cut(s)	190, 293
ScrFI	CCNGG	3 cut(s)	122, 1035, 1376
SduI	GDGCHC	3 cut(s)	113, 1231, 1266
SexAI	ACCWGGT	1 cut(s)	1374
SfaNI	GCATC	2 cut(s)	47, 454
SfcI	CTRYAG	1 cut(s)	954
SmiMI	CAYNNNNRTG	1 cut(s)	1256
SphI	GCATGC	1 cut(s)	1157
SsiI	CCGC	3 cut(s)	228, 281, 951
SspMI	CTAG	3 cut(s)	1079, 1097, 1448
StyD4I	CCNGG	3 cut(s)	120, 1033, 1374
StyI	CCWWGG	1 cut(s)	534
TaaI	ACNGT	4 cut(s)	295, 772, 778, 1336
TaiI	ACGT	2 cut(s)	907, 1065
TaqI	TCGA	5 cut(s)	179, 757, 1110, 1114, 1246
TatI	WGTACW	2 cut(s)	846, 1000
TauI	GCSGC	1 cut(s)	230
TfiI	GAWTC	5 cut(s)	63, 812, 1216, 1457, 1499
Tru1I	TTAA	5 cut(s)	396, 699, 852, 978, 1188
Tru9I	TTAA	5 cut(s)	396, 699, 852, 978, 1188
TscAI	CASTG	3 cut(s)	93, 490, 1516
TseFI	GTSAC	3 cut(s)	309, 1297, 1330
TseI	GCWGC	8 cut(s)	230, 239, 424, 467, 656, 953, 956, 1197
Tsp45I	GTSAC	3 cut(s)	309, 1297, 1330
TspDTI	ATGAA	8 cut(s)	210, 491, 583, 776, 1001, 1104, 1352, 1449
TspGWI	ACGGA	2 cut(s)	452, 535
TspRI	CASTG	3 cut(s)	93, 490, 1516
VspI	ATTAAT	1 cut(s)	699
XapI	RAATTY	2 cut(s)	328, 1071
XbaI	TCTAGA	1 cut(s)	1447
XceI	RCATGY	1 cut(s)	1157
XmiI	GTMKAC	2 cut(s)	384, 670
XmnI	GAANNNNTTC	1 cut(s)	444
XspI	CTAG	3 cut(s)	1079, 1097, 1448
ZraI	GACGTC	1 cut(s)	905

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.