Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0009498

Physical Location & Seq

Genomic Coordinates Reverse (-)

24974890 .. 24980130

Gene Structure 5241 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG239500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1656 bp

ATGGACCCCAGCACCAGAATCCAAACAAACAAACTTATAACCGTAGTCAACAATATTCAACTCCTTCCTCTGTTTTCCCTCATTCTCCGTTTTGGTCCTCAAACAACAACACCAACAATGGAGCCTCTTTGCCCAAACTTGGATCTCAAACCAACACCTTGCTCACCAATTTCGCCCAGATTCCCAAAACCCACCTCACTTTTACTGCCCCCGCATCGGTTTTCATGCTCGGATCGCAGTGTGAGCCGGAAATGGAGAGTCGGTGCTGCAAAGTCTGAAGCTCATGAAAACTCTAGTCAGGAACTCTTTGGGTCCATTAGAAAAGGCTTTCTTGCGTTTTCTGTTGCCGCTGCTGCCAGTTTTTCGCTCTGTTTCGATTCTCCGGCGATGGCAGAGTCGTTGACCGTTGCTTTTCCGGTTTCACGCACTACTGAGGTGAACTCAGTACAAAGAACTCTTGTGGAGGCTTGGGGTTTAATTAGAGAAACATTCGTAGACCCAACATTTAATCATCAAGATTGGGATCTTAAGTTGCAGCAAACAATGGTCGAAATGTTTCCCCTTAGGTCAGCGGATGCAGCTTATATGAAGATCAGTGGAATGCTTTCTACTCTTGGTGATCCCTTTACAAAGATTATTAGTCCAAAGGAATATCAAAGTTTTCGAATTGGAAGCAATGGAAATCTACAAGGAGTTGGCCTTTTCATAGGTACTGAACCAAGAACAGGTCATCTGGTTGTTATGTCTTGTGTAGACGGTAGCCCAGCTGCTCGTGCTGGTATTCATGAGGGAGATGAGTTGGTTGAAATTAACGGTGAGAAGTTTAATGGTGTTGACACTGAAGCAGCAGTACAGAAGCTTAGAGGACGAGTTGGAACAACTGTTACAGTAAAAGTTCACAGTGGCAATGATTTGGGAAGTGATGCTAGTATAAGAGAGGTGAAATTACCTCGGGAGTTCATTAAGGTTTCCCCAATTTCAACTGCAACCATCCCTCATAGAACCCCCGATGGACATTTAACAAAGACGGGTTATGTGAAGCTGTCAGCCTTCTCTCAGACTGCTGCAGCTGATATGGAAAATGCTATCAAGGAAATGAAGAGTCAGGGTGTACATTCATACATACTGGATTTGAGGAACAATCCGGGGGGACTGGTGAAAGCTGGACTTGATGTTGCCCAAATTTGGCTAGACGGGGATGAAACTCTAGTCAACACTGTTGATCGGGAAGGGAACTTGTTACCAATTAATATGGTAGATGGGCATGCTATCACACATGATCCACTTGTTGTGCTTGTCAATGAGGGCAGCGCAAGTGCAAGTGAAATCTTGGCAGGGGCACTGCATGACAATCGTCGAGCTACTCTTGTGGGTCACAGAACCTTTGGGAAAGGAAAAATTCAGAGTGTCACAGAGCTACATGATGGATCGGCCTTATTTGTCACGGTGGCAAAGTATTTATCGCCAGCGCTTCATGACATAGACCAGGTTGGCATAGCTCCTGATGTGCAATGCACAACTGAAATGCTCAATTCTCCAAAGGATTCAATGTTGAAGGAGCAGAAGAGCTCAGTCTCGTCTCTAGAAGCAGATTCCTGTGTTTTGGTAGCAGAACATGAATTGGACATTCAAGAGTCCAAAGGCACTGCTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0005575 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0016020 GO:0016787 GO:0019538 GO:0043170 GO:0044238 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PDZ PDZ_2 Peptidase_S41

Protein Analysis

551

Amino Acids

59.59

Weight (kDa)

5.91

Isoelectric Point (pI)

34.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PDZ	PF00595	232 - 299	1.6e-10	PDZ domain
PDZ_2	PF13180	236 - 303	5.8e-08	PDZ domain
PDZ_6	PF17820	247 - 299	1.7e-09	PDZ domain
Peptidase_S41	PF03572	342 - 504	1e-50	Peptidase family S41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009498)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G57680 AT3G57680 AT3G57680
fragaria_vesca	FvH4_6g23140 FvH4_6g23140 FvH4_6g23140 FvH4_6g23140 FvH4_6g23140
malus_domestica	MD12G1066100.v1.1 MD14G1066000.v1.1
prunus_persica	Prupe.7G068000_v2.0.a1
pyrus_communis	pycom12g05770 pycom14g05370
rosa_chinensis	RchiOBHm_Chr3g0480991
rosa_laevigata	RLG00000023435
rosa_multiflora	Rmu_sc0002927.1_g000022
rosa_roxburghii	Rroxscaffold_6G00400770
rosa_rugosa	Rorug03G0188700
rosa_samantha	Rh3AG239500 Rh3CG269500 Rh3DG265500
rosa_wichuraiana	Rw0G018670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	38
AccI	GTMKAC	2 cut(s)	495, 753
AciI	CCGC	3 cut(s)	212, 348, 572
AclWI	GGATC	6 cut(s)	150, 240, 531, 614, 1274, 1435
AcsI	RAATTY	2 cut(s)	1182, 1398
AcuI	CTGAAG	2 cut(s)	297, 861
AfaI	GTAC	4 cut(s)	447, 712, 852, 1113
AfeI	AGCGCT	1 cut(s)	1470
AfiI	CCNNNNNNNGG	4 cut(s)	139, 216, 725, 1185
AflII	CTTAAG	1 cut(s)	527
AgsI	TTSAA	6 cut(s)	59, 806, 981, 1548, 1555, 1631
AjnI	CCWGG	1 cut(s)	1485
Alw21I	GWGCWC	1 cut(s)	1571
Alw26I	GTCTC	2 cut(s)	1579, 1584
AlwI	GGATC	6 cut(s)	150, 240, 531, 614, 1274, 1435
Ama87I	CYCGRG	1 cut(s)	951
Aor51HI	AGCGCT	1 cut(s)	1470
AoxI	GGCC	2 cut(s)	697, 1431
ApoI	RAATTY	2 cut(s)	1182, 1398
AseI	ATTAAT	1 cut(s)	1248
Asp700I	GAANNNNTTC	2 cut(s)	555, 604
AspLEI	GCGC	2 cut(s)	1313, 1471
AspS9I	GGNCC	3 cut(s)	4, 95, 312
AsuC2I	CCSGG	1 cut(s)	1146
AsuHPI	GGTGA	6 cut(s)	156, 448, 629, 827, 952, 1168
AsuII	TTCGAA	1 cut(s)	664
AvaI	CYCGRG	1 cut(s)	951
AvaII	GGWCC	3 cut(s)	4, 95, 312
AxyI	CCTNAGG	1 cut(s)	563
BaeGI	GKGCMC	1 cut(s)	1342
BanII	GRGCYC	1 cut(s)	1571
BarI	GAAGNNNNNNTAC	2 cut(s)	834, 866
BauI	CACGAG	1 cut(s)	771
Bbv12I	GWGCWC	1 cut(s)	1571
BccI	CCATC	5 cut(s)	382, 998, 1004, 1253, 1418
BcgI	CGANNNNNNTGC	2 cut(s)	1334, 1368
BciT130I	CCWGG	1 cut(s)	1487
BcnI	CCSGG	1 cut(s)	1146
BcoDI	GTCTC	2 cut(s)	1579, 1584
BfaI	CTAG	5 cut(s)	294, 927, 1190, 1208, 1583
BfmI	CTRYAG	1 cut(s)	1065
BfoI	RGCGCY	1 cut(s)	1472
BfrI	CTTAAG	1 cut(s)	527
Bme1390I	CCNGG	2 cut(s)	1146, 1487
Bme18I	GGWCC	3 cut(s)	4, 95, 312
BmeT110I	CYCGRG	1 cut(s)	951
BmgT120I	GGNCC	3 cut(s)	4, 95, 312
BmiI	GGNNCC	3 cut(s)	6, 123, 313
BmrFI	CCNGG	2 cut(s)	1146, 1487
BmsI	GCATC	3 cut(s)	223, 565, 913
BoxI	GACNNNNGTC	1 cut(s)	1353
BplI	GAGNNNNNCTC	2 cut(s)	425, 457
Bpu14I	TTCGAA	1 cut(s)	664
BpuMI	CCSGG	1 cut(s)	1146
BsaBI	GATNNNNATC	1 cut(s)	522
BsaJI	CCNNGG	2 cut(s)	950, 1145
BsaWI	WCCGGW	1 cut(s)	415
BsaXI	ACNNNNNCTCC	2 cut(s)	247, 277
Bsc4I	CCNNNNNNNGG	4 cut(s)	139, 216, 725, 1185
Bse1I	ACTGG	3 cut(s)	357, 1131, 1158
Bse21I	CCTNAGG	1 cut(s)	563
Bse3DI	GCAATG	3 cut(s)	682, 913, 1517
Bse8I	GATNNNNATC	1 cut(s)	522
BseBI	CCWGG	1 cut(s)	1487
BseDI	CCNNGG	2 cut(s)	950, 1145
BseGI	GGATG	3 cut(s)	580, 990, 1204
BseJI	GATNNNNATC	1 cut(s)	522
BseLI	CCNNNNNNNGG	4 cut(s)	139, 216, 725, 1185
BseMI	GCAATG	3 cut(s)	682, 913, 1517
BseMII	CTCAG	4 cut(s)	423, 456, 1070, 1584
BseNI	ACTGG	3 cut(s)	357, 1131, 1158
BseSI	GKGCMC	1 cut(s)	1342
BseYI	CCCAGC	2 cut(s)	8, 763
BshFI	GGCC	2 cut(s)	699, 1433
BsiHKAI	GWGCWC	1 cut(s)	1571
BsiHKCI	CYCGRG	1 cut(s)	951
BsiSI	CCGG	4 cut(s)	247, 383, 416, 1145
BslFI	GGGAC	1 cut(s)	1164
BslI	CCNNNNNNNGG	4 cut(s)	139, 216, 725, 1185
BsmAI	GTCTC	2 cut(s)	1579, 1584
BsmBI	CGTCTC	1 cut(s)	1584
BsmFI	GGGAC	1 cut(s)	1164
BsmI	GAATGC	1 cut(s)	606
BsnI	GGCC	2 cut(s)	699, 1433
BsoBI	CYCGRG	1 cut(s)	951
Bsp119I	TTCGAA	1 cut(s)	664
Bsp1286I	GDGCHC	2 cut(s)	1342, 1571
Bsp1407I	TGTACA	1 cut(s)	1111
Bsp143I	GATC	8 cut(s)	142, 232, 523, 591, 619, 1222, 1279, 1427
BspACI	CCGC	3 cut(s)	212, 348, 572
BspANI	GGCC	2 cut(s)	699, 1433
BspCNI	CTCAG	4 cut(s)	424, 455, 1069, 1583
BspHI	TCATGA	3 cut(s)	283, 784, 1474
BspLI	GGNNCC	3 cut(s)	6, 123, 313
BspMAI	CTGCAG	1 cut(s)	1069
BspPI	GGATC	6 cut(s)	150, 240, 531, 614, 1274, 1435
BspQI	GCTCTTC	1 cut(s)	1559
BspT104I	TTCGAA	1 cut(s)	664
BspTI	CTTAAG	1 cut(s)	527
BsrDI	GCAATG	3 cut(s)	682, 913, 1517
BsrGI	TGTACA	1 cut(s)	1111
BsrI	ACTGG	3 cut(s)	357, 1131, 1158
BssECI	CCNNGG	2 cut(s)	950, 1145
BssMI	GATC	8 cut(s)	142, 232, 523, 591, 619, 1222, 1279, 1427
BssSI	CACGAG	1 cut(s)	771
Bst2BI	CACGAG	1 cut(s)	771
Bst2UI	CCWGG	1 cut(s)	1487
Bst4CI	ACNGT	9 cut(s)	43, 406, 758, 815, 883, 889, 902, 1219, 1447
Bst6I	CTCTTC	2 cut(s)	1094, 1559
BstAFI	CTTAAG	1 cut(s)	527
BstAUI	TGTACA	1 cut(s)	1111
BstBI	TTCGAA	1 cut(s)	664
BstC8I	GCNNGC	2 cut(s)	1266, 1467
BstDEI	CTNAG	6 cut(s)	432, 442, 563, 860, 1056, 1570
BstF5I	GGATG	3 cut(s)	580, 990, 1204
BstH2I	RGCGCY	1 cut(s)	1472
BstHHI	GCGC	2 cut(s)	1313, 1471
BstKTI	GATC	8 cut(s)	145, 235, 526, 594, 622, 1225, 1282, 1430
BstMAI	GTCTC	2 cut(s)	1579, 1584
BstMBI	GATC	8 cut(s)	142, 232, 523, 591, 619, 1222, 1279, 1427
BstMWI	GCNNNNNNNGC	5 cut(s)	234, 243, 353, 578, 773
BstNI	CCWGG	1 cut(s)	1487
BstNSI	RCATGY	1 cut(s)	1268
BstPAI	GACNNNNGTC	1 cut(s)	1353
BstSCI	CCNGG	2 cut(s)	1144, 1485
BstSFI	CTRYAG	1 cut(s)	1065
BstSLI	GKGCMC	1 cut(s)	1342
BstX2I	RGATCY	2 cut(s)	142, 523
BstYI	RGATCY	2 cut(s)	142, 523
Bsu36I	CCTNAGG	1 cut(s)	563
BsuRI	GGCC	2 cut(s)	699, 1433
BtgZI	GCGATG	1 cut(s)	401
BtsCI	GGATG	3 cut(s)	580, 990, 1204
BtsI	GCAGTG	3 cut(s)	244, 1340, 1644
BtsIMutI	CAGTG	7 cut(s)	244, 601, 837, 907, 1215, 1340, 1644
Cac8I	GCNNGC	2 cut(s)	1266, 1467
CciI	TCATGA	3 cut(s)	283, 784, 1474
CfoI	GCGC	2 cut(s)	1313, 1471
Cfr13I	GGNCC	3 cut(s)	4, 95, 312
CsiI	ACCWGGT	1 cut(s)	1485
Csp6I	GTAC	4 cut(s)	446, 711, 851, 1112
CviAII	CATG	9 cut(s)	225, 284, 785, 1265, 1277, 1346, 1421, 1475, 1616
CviQI	GTAC	4 cut(s)	446, 711, 851, 1112
DdeI	CTNAG	6 cut(s)	432, 442, 563, 860, 1056, 1570
DpnI	GATC	8 cut(s)	144, 234, 525, 593, 621, 1224, 1281, 1429
DpnII	GATC	8 cut(s)	142, 232, 523, 591, 619, 1222, 1279, 1427
Eam1104I	CTCTTC	2 cut(s)	1094, 1559
EarI	CTCTTC	2 cut(s)	1094, 1559
Ecl136II	GAGCTC	1 cut(s)	1569
Eco24I	GRGCYC	1 cut(s)	1571
Eco47I	GGWCC	3 cut(s)	4, 95, 312
Eco47III	AGCGCT	1 cut(s)	1470
Eco53kI	GAGCTC	1 cut(s)	1569
Eco57I	CTGAAG	2 cut(s)	297, 861
Eco81I	CCTNAGG	1 cut(s)	563
Eco88I	CYCGRG	1 cut(s)	951
EcoICRI	GAGCTC	1 cut(s)	1569
EcoRII	CCWGG	1 cut(s)	1485
EcoT38I	GRGCYC	1 cut(s)	1571
Esp3I	CGTCTC	1 cut(s)	1584
FaeI	CATG	9 cut(s)	228, 287, 788, 1268, 1280, 1349, 1424, 1478, 1619
FalI	AAGNNNNNCTT	4 cut(s)	315, 347, 1152, 1184
FaqI	GGGAC	1 cut(s)	1164
FatI	CATG	9 cut(s)	224, 283, 784, 1264, 1276, 1345, 1420, 1474, 1615
FauI	CCCGC	1 cut(s)	219
FblI	GTMKAC	2 cut(s)	495, 753
FokI	GGATG	3 cut(s)	587, 977, 1211
FriOI	GRGCYC	1 cut(s)	1571
FspBI	CTAG	5 cut(s)	294, 927, 1190, 1208, 1583
GlaI	GCGC	2 cut(s)	1312, 1470
GsaI	CCCAGC	2 cut(s)	12, 767
HaeII	RGCGCY	1 cut(s)	1472
HaeIII	GGCC	2 cut(s)	699, 1433
HapII	CCGG	4 cut(s)	247, 383, 416, 1145
HhaI	GCGC	2 cut(s)	1313, 1471
Hin1II	CATG	9 cut(s)	228, 287, 788, 1268, 1280, 1349, 1424, 1478, 1619
Hin6I	GCGC	2 cut(s)	1311, 1469
HinP1I	GCGC	2 cut(s)	1311, 1469
HincII	GTYRAC	4 cut(s)	49, 402, 835, 1213
HindII	GTYRAC	4 cut(s)	49, 402, 835, 1213
HindIII	AAGCTT	1 cut(s)	857
HinfI	GANTC	9 cut(s)	18, 180, 258, 377, 395, 1102, 1544, 1592, 1634
HpaII	CCGG	4 cut(s)	247, 383, 416, 1145
HphI	GGTGA	6 cut(s)	156, 448, 629, 827, 952, 1168
Hpy166II	GTNNAC	9 cut(s)	49, 402, 439, 496, 754, 835, 898, 1112, 1213
Hpy188I	TCNGA	4 cut(s)	232, 277, 1059, 1404
Hpy8I	GTNNAC	9 cut(s)	49, 402, 439, 496, 754, 835, 898, 1112, 1213
Hpy99I	CGWCG	1 cut(s)	1359
HpyAV	CCTTC	4 cut(s)	74, 1060, 1223, 1549
HpyCH4III	ACNGT	9 cut(s)	43, 406, 758, 815, 883, 889, 902, 1219, 1447
HpyCH4V	TGCA	9 cut(s)	269, 535, 578, 986, 1067, 1319, 1345, 1510, 1515
HpyF10VI	GCNNNNNNNGC	5 cut(s)	234, 243, 353, 578, 773
HpyF3I	CTNAG	6 cut(s)	432, 442, 563, 860, 1056, 1570
Hsp92II	CATG	9 cut(s)	228, 287, 788, 1268, 1280, 1349, 1424, 1478, 1619
HspAI	GCGC	2 cut(s)	1311, 1469
Kzo9I	GATC	8 cut(s)	142, 232, 523, 591, 619, 1222, 1279, 1427
LguI	GCTCTTC	1 cut(s)	1559
LmnI	GCTCC	3 cut(s)	121, 1504, 1558
LweI	GCATC	3 cut(s)	223, 565, 913
MabI	ACCWGGT	1 cut(s)	1485
MaeI	CTAG	5 cut(s)	294, 927, 1190, 1208, 1583
MaeIII	GTNAC	5 cut(s)	883, 1239, 1373, 1408, 1441
MalI	GATC	8 cut(s)	144, 234, 525, 593, 621, 1224, 1281, 1429
MboI	GATC	8 cut(s)	142, 232, 523, 591, 619, 1222, 1279, 1427
MboII	GAAGA	3 cut(s)	601, 1111, 1576
MflI	RGATCY	2 cut(s)	142, 523
MhlI	GDGCHC	2 cut(s)	1342, 1571
MlyI	GAGTC	4 cut(s)	267, 404, 1111, 1643
MmeI	TCCRAC	1 cut(s)	853
MroXI	GAANNNNTTC	2 cut(s)	555, 604
MseI	TTAA	8 cut(s)	476, 507, 528, 810, 825, 963, 1019, 1248
MspA1I	CMGCKG	4 cut(s)	350, 572, 767, 1070
MspCI	CTTAAG	1 cut(s)	527
MspI	CCGG	4 cut(s)	247, 383, 416, 1145
MspR9I	CCNGG	2 cut(s)	1146, 1487
Mva1269I	GAATGC	1 cut(s)	606
MvaI	CCWGG	1 cut(s)	1487
MwoI	GCNNNNNNNGC	5 cut(s)	234, 243, 353, 578, 773
NciI	CCSGG	1 cut(s)	1146
NdeII	GATC	8 cut(s)	142, 232, 523, 591, 619, 1222, 1279, 1427
NlaIII	CATG	9 cut(s)	228, 287, 788, 1268, 1280, 1349, 1424, 1478, 1619
NlaIV	GGNNCC	3 cut(s)	6, 123, 313
NmuCI	GTSAC	3 cut(s)	1373, 1408, 1441
NspI	RCATGY	1 cut(s)	1268
NspV	TTCGAA	1 cut(s)	664
PaeI	GCATGC	1 cut(s)	1268
PagI	TCATGA	3 cut(s)	283, 784, 1474
PciSI	GCTCTTC	1 cut(s)	1559
PctI	GAATGC	1 cut(s)	606
PdmI	GAANNNNTTC	2 cut(s)	555, 604
PfeI	GAWTC	5 cut(s)	18, 180, 377, 1544, 1592
PleI	GAGTC	4 cut(s)	266, 403, 1110, 1642
PpsI	GAGTC	4 cut(s)	266, 403, 1110, 1642
PshAI	GACNNNNGTC	1 cut(s)	1353
PshBI	ATTAAT	1 cut(s)	1248
PsiI	TTATAA	1 cut(s)	38
Psp124BI	GAGCTC	1 cut(s)	1571
Psp6I	CCWGG	1 cut(s)	1485
PspFI	CCCAGC	2 cut(s)	8, 763
PspGI	CCWGG	1 cut(s)	1485
PspN4I	GGNNCC	3 cut(s)	6, 123, 313
PspPI	GGNCC	3 cut(s)	4, 95, 312
PsrI	GAACNNNNNNTAC	2 cut(s)	868, 900
PstI	CTGCAG	1 cut(s)	1069
PsuI	RGATCY	2 cut(s)	142, 523
PvuII	CAGCTG	2 cut(s)	767, 1070
RsaI	GTAC	4 cut(s)	447, 712, 852, 1113
RsaNI	GTAC	4 cut(s)	446, 711, 851, 1112
SacI	GAGCTC	1 cut(s)	1571
SapI	GCTCTTC	1 cut(s)	1559
SaqAI	TTAA	8 cut(s)	476, 507, 528, 810, 825, 963, 1019, 1248
Sau3AI	GATC	8 cut(s)	142, 232, 523, 591, 619, 1222, 1279, 1427
Sau96I	GGNCC	3 cut(s)	4, 95, 312
SchI	GAGTC	4 cut(s)	267, 404, 1111, 1643
ScrFI	CCNGG	2 cut(s)	1146, 1487
SduI	GDGCHC	2 cut(s)	1342, 1571
SexAI	ACCWGGT	1 cut(s)	1485
SfaNI	GCATC	3 cut(s)	223, 565, 913
SfcI	CTRYAG	1 cut(s)	1065
SfuI	TTCGAA	1 cut(s)	664
SinI	GGWCC	3 cut(s)	4, 95, 312
SmlI	CTYRAG	1 cut(s)	527
SmoI	CTYRAG	1 cut(s)	527
SphI	GCATGC	1 cut(s)	1268
SsiI	CCGC	3 cut(s)	212, 348, 572
SspI	AATATT	1 cut(s)	55
SspMI	CTAG	5 cut(s)	294, 927, 1190, 1208, 1583
SstI	GAGCTC	1 cut(s)	1571
StyD4I	CCNGG	2 cut(s)	1144, 1485
TaaI	ACNGT	9 cut(s)	43, 406, 758, 815, 883, 889, 902, 1219, 1447
TaqI	TCGA	4 cut(s)	375, 549, 664, 1357
TatI	WGTACW	3 cut(s)	445, 850, 1111
TauI	GCSGC	1 cut(s)	350
TfiI	GAWTC	5 cut(s)	18, 180, 377, 1544, 1592
Tru1I	TTAA	8 cut(s)	476, 507, 528, 810, 825, 963, 1019, 1248
Tru9I	TTAA	8 cut(s)	476, 507, 528, 810, 825, 963, 1019, 1248
TscAI	CASTG	7 cut(s)	244, 601, 844, 907, 1222, 1347, 1651
TseFI	GTSAC	3 cut(s)	1373, 1408, 1441
Tsp45I	GTSAC	3 cut(s)	1373, 1408, 1441
TspGWI	ACGGA	1 cut(s)	77
TspRI	CASTG	7 cut(s)	244, 601, 844, 907, 1222, 1347, 1651
Vha464I	CTTAAG	1 cut(s)	527
VpaK11BI	GGWCC	3 cut(s)	4, 95, 312
VspI	ATTAAT	1 cut(s)	1248
XapI	RAATTY	2 cut(s)	1182, 1398
XbaI	TCTAGA	1 cut(s)	1582
XceI	RCATGY	1 cut(s)	1268
XmiI	GTMKAC	2 cut(s)	495, 753
XmnI	GAANNNNTTC	2 cut(s)	555, 604
XspI	CTAG	5 cut(s)	294, 927, 1190, 1208, 1583

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.