Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0016074

Physical Location & Seq

Genomic Coordinates Forward (+)

8071260 .. 8073050

Gene Structure 1791 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1068000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1791 bp

ATGCTTCGTCCAAATCTCCCAAAACCCCCACAAAACCCTCTAAACCAGCAAAGCTTTGAACAAAACTACAGAGACGTCTGCAACCTCCTCCTCTCCCTAACCCACTCAAGGTCCCTCCCAAAGGGTCTGCAACTCCATTCCCATGTCCTCAAATCTGGCCTCCAAACCATCCCTCTCATCTCCCACCACCTCATCAACTTCTACTCCAAGAACCAGCTCCCCCTTCATTCCCGCCAAATTTTTGAAGAAGCCTCACGAAAGTCATCAACTACTTGGAGCTCCGTCATCTCCTCATTTGCCCAGAACGAGCTTCCGGTCCTCGCCATTGAGTACTTTCGTCGAATGCTTGGCGCGCAACTGCGTCCTGATGACCATATATACCCGAGCGTCGCCAAGTCCTGCGCGATTTTGAATCGGCTCGATGTTGGGCAGTCTGTGCATTGCCTTGCGGTGAAGACTGGGTACGAGTTTGATGTGTTTGTGGGAAGTTCTGTGGTCGATATGTATGCGAAATGCGGAGAGATAAGGGATGCTCGGAAGGTGTTTGACGAAATTCCTGAGAAGAATGTGGTTTCTTGGAGTGGGATGATATATGGGTATACTCAATTGGGTCAAGACGAGGAGGCTTTGAGACTATTTAAACAAGCCATGGTTGAAAATTTGGATGTCAATGACTTTACGTTTTCGAGTGTTATACGGGTTTGTGGCAATTCGACGCTTTTTGAATTGGGGAGGCAAATACATGGCTTGTGCTTCAAAACGAACTTTGATTTGTCGAGCTTTGTTGGTAGTTCTTTGGTTTCTCTGTACTCTAAGTGTGGAGTGATTGAAGGAGCTTATCGTGTTTTTGATGAGATACCCGTTAAGAATCTTGGAATGTGGAATGCAATGCTGATCGCAAGCGCCCAGCACGTGCACACGGATAACGCTCTTGATCTGTTTAAACAGATGGAAAGTGCAGGGATGAAGCCGAATTTCATTACGTTTTTGTGTGTGCTCTATGCTTGTAGTCATGCTGGGCTAGTTGAAAAGGGGCAATATTACTTTAGCCTCATGAGAGAGTATGGGATTGAGCCAGGGGAGCAGCATTATGCTACCCTAGTGGACTTGCTTGGCCGTGCTGGAAAATTGCAGGAAGCAGTTAAAATTATTGATGAAATGCCTATAGAACCAACAGAATCTATATGGGGAGCTTTATTAACGGGTTGTCGAATCCACGGTGACACTGAATTGGCAGCCTCTGTGGCTGACAGAGTCTTTGAGTTGGGTCCTGTGAGCTCTGGCCTGCATGTGCTTTTGTCTAATGCTTATGCTGCTGCCCAAAGATTTGAGGAAGCAGCAAAAGTCAGGAAGATGCTAAGAGATCGAGGTGTGAAAAAGGAAACGGGTTTGAGCTGGGTTGAGGAGGGAAACAAGATTCACACATTCGCGGCTGGGGACAGGACTCACATGAGAACTAAAGAGATTTATGAGAAGTTGGAGGAGTTAGGGGAGGAAATGGAGAAAGCTGGTTATGTTGCAGACACAAGTTTTGTGCTAAGAGAGGTAAATCGCGAAGAGAAAGATCAGACAATTAGGTATCACAGTGAAAGACTAGCTGTAGCATTTGGTCTTATAACCTTTCTGCCTGATAGACCAATTAGGATTATGAAGAACTTGCGCATTTGTGGTGACTGTCATACTGCAATTAAGTTTATGTCCAAGTGCTCAGGAAGGGTTATCATAGTGAGGGATAACAATAGGTTTCATAGGTTTGAGGATGGAAAGTGTACCTGCGGAGATTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016553 GO:0016554 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

597

Amino Acids

67.34

Weight (kDa)

6.71

Isoelectric Point (pI)

38.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	188 - 236	1.9e-06	PPR repeat family
PPR_long	PF17177	207 - 385	1.4e-07	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	292 - 337	9.4e-06	PPR repeat family
E_motif	PF20431	406 - 468	2.2e-11	E motif
Eplus_motif	PF20430	473 - 500	1.2e-06	E+ motif
DYW_deaminase	PF14432	504 - 596	1.9e-37	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016074)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52630
fragaria_vesca	FvH4_5g33500 FvH4_5g33500 FvH4_5g33620
malus_domestica	MD12G1068000.v1.1 MD14G1068100.v1.1
prunus_persica	Prupe.7G066200_v2.0.a1
pyrus_communis	pycom12g06000
rosa_chinensis	RchiOBHm_Chr7g0232261
rosa_laevigata	RLG00000001359
rosa_multiflora	Rmu_sc0004136.1_g000002
rosa_roxburghii	Rroxscaffold_3G00228480
rosa_samantha	Rh7AG426400 Rh7BG400100
rosa_wichuraiana	Rw7G035330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1616
AatII	GACGTC	1 cut(s)	78
Acc16I	TGCGCA	1 cut(s)	1661
Acc36I	ACCTGC	1 cut(s)	1781
AccI	GTMKAC	1 cut(s)	599
AccII	CGCG	4 cut(s)	353, 404, 1430, 1554
AciI	CCGC	5 cut(s)	232, 449, 516, 1430, 1776
AcoI	YGGCCR	1 cut(s)	1114
AcsI	RAATTY	4 cut(s)	237, 552, 658, 973
AcvI	CACGTG	1 cut(s)	913
AcyI	GRCGYC	1 cut(s)	75
AfaI	GTAC	4 cut(s)	332, 464, 809, 1771
AfiI	CCNNNNNNNGG	2 cut(s)	108, 121
AgsI	TTSAA	8 cut(s)	59, 245, 412, 656, 725, 757, 830, 1028
AjnI	CCWGG	1 cut(s)	1075
Alw21I	GWGCWC	5 cut(s)	281, 918, 999, 1280, 1709
Alw26I	GTCTC	2 cut(s)	66, 625
Alw44I	GTGCAC	1 cut(s)	914
AlwNI	CAGNNNCTG	1 cut(s)	1241
Ama87I	CYCGRG	1 cut(s)	382
AoxI	GGCC	3 cut(s)	157, 1114, 1282
ApaLI	GTGCAC	1 cut(s)	914
ApeKI	GCWGC	5 cut(s)	1084, 1235, 1313, 1316, 1337
ApoI	RAATTY	4 cut(s)	237, 552, 658, 973
ArsI	GACNNNNNNTTYG	4 cut(s)	1241, 1273, 1514, 1546
AspLEI	GCGC	5 cut(s)	353, 355, 404, 905, 1662
AspS9I	GGNCC	3 cut(s)	111, 316, 1268
AsuHPI	GGTGA	3 cut(s)	463, 1232, 1682
AvaI	CYCGRG	1 cut(s)	382
AvaII	GGWCC	3 cut(s)	111, 316, 1268
BaeGI	GKGCMC	1 cut(s)	918
BanII	GRGCYC	2 cut(s)	281, 1280
BarI	GAAGNNNNNNTAC	2 cut(s)	446, 478
BbrPI	CACGTG	1 cut(s)	913
BbsI	GAAGAC	1 cut(s)	461
Bbv12I	GWGCWC	5 cut(s)	281, 918, 999, 1280, 1709
BbvI	GCAGC	5 cut(s)	1096, 1247, 1300, 1303, 1349
BccI	CCATC	3 cut(s)	176, 943, 1754
BceAI	ACGGC	1 cut(s)	1101
BcgI	CGANNNNNNTGC	2 cut(s)	488, 522
BciT130I	CCWGG	1 cut(s)	1077
BcoDI	GTCTC	2 cut(s)	66, 625
BfaI	CTAG	3 cut(s)	1022, 1100, 1595
BfmI	CTRYAG	3 cut(s)	67, 1164, 1599
BfoI	RGCGCY	1 cut(s)	906
BfuAI	ACCTGC	1 cut(s)	1781
BglI	GCCNNNNNGGC	1 cut(s)	1244
BisI	GCNGC	6 cut(s)	1085, 1236, 1314, 1317, 1338, 1431
BlsI	GCNGC	6 cut(s)	1086, 1237, 1315, 1318, 1339, 1432
BmcAI	AGTACT	1 cut(s)	332
Bme1390I	CCNGG	1 cut(s)	1077
Bme18I	GGWCC	3 cut(s)	111, 316, 1268
BmeT110I	CYCGRG	1 cut(s)	382
BmgT120I	GGNCC	3 cut(s)	111, 316, 1268
BmiI	GGNNCC	2 cut(s)	113, 1269
BmrFI	CCNGG	1 cut(s)	1077
BmrI	ACTGGG	1 cut(s)	468
BmsI	GCATC	2 cut(s)	520, 1344
BmuI	ACTGGG	1 cut(s)	468
BpiI	GAAGAC	1 cut(s)	461
Bpu10I	CCTNAGC	1 cut(s)	1708
BpuEI	CTTGAG	1 cut(s)	91
BsaAI	YACGTR	1 cut(s)	913
BsaHI	GRCGYC	1 cut(s)	75
BsaJI	CCNNGG	3 cut(s)	648, 1076, 1216
BsaWI	WCCGGW	1 cut(s)	313
BsaXI	ACNNNNNCTCC	2 cut(s)	188, 218
Bsc4I	CCNNNNNNNGG	2 cut(s)	108, 121
Bse1I	ACTGG	1 cut(s)	463
Bse3DI	GCAATG	2 cut(s)	439, 894
BseBI	CCWGG	1 cut(s)	1077
BseDI	CCNNGG	3 cut(s)	648, 1076, 1216
BseGI	GGATG	6 cut(s)	168, 535, 591, 670, 969, 1765
BseLI	CCNNNNNNNGG	2 cut(s)	108, 121
BseMI	GCAATG	2 cut(s)	439, 894
BseMII	CTCAG	2 cut(s)	549, 1722
BseNI	ACTGG	1 cut(s)	463
BsePI	GCGCGC	1 cut(s)	351
BseRI	GAGGAG	6 cut(s)	77, 80, 280, 635, 1418, 1496
BseSI	GKGCMC	1 cut(s)	918
BseXI	GCAGC	5 cut(s)	1096, 1247, 1300, 1303, 1349
BseYI	CCCAGC	4 cut(s)	906, 1016, 1395, 1433
BsgI	GTGCAG	1 cut(s)	978
Bsh1236I	CGCG	4 cut(s)	353, 404, 1430, 1554
BshFI	GGCC	3 cut(s)	159, 1116, 1284
BsiHKAI	GWGCWC	5 cut(s)	281, 918, 999, 1280, 1709
BsiHKCI	CYCGRG	1 cut(s)	382
BsiSI	CCGG	1 cut(s)	314
BslFI	GGGAC	2 cut(s)	97, 1451
BslI	CCNNNNNNNGG	2 cut(s)	108, 121
BsmAI	GTCTC	2 cut(s)	66, 625
BsmBI	CGTCTC	1 cut(s)	66
BsmFI	GGGAC	2 cut(s)	97, 1451
BsmI	GAATGC	2 cut(s)	348, 889
BsnI	GGCC	3 cut(s)	159, 1116, 1284
BsoBI	CYCGRG	1 cut(s)	382
Bsp1286I	GDGCHC	5 cut(s)	281, 918, 999, 1280, 1709
Bsp143I	GATC	4 cut(s)	894, 934, 1363, 1564
Bsp19I	CCATGG	1 cut(s)	648
Bsp68I	TCGCGA	1 cut(s)	1554
BspACI	CCGC	5 cut(s)	232, 449, 516, 1430, 1776
BspANI	GGCC	3 cut(s)	159, 1116, 1284
BspCNI	CTCAG	2 cut(s)	550, 1721
BspFNI	CGCG	4 cut(s)	353, 404, 1430, 1554
BspHI	TCATGA	1 cut(s)	1053
BspLI	GGNNCC	2 cut(s)	113, 1269
BspMI	ACCTGC	1 cut(s)	1781
BsrDI	GCAATG	2 cut(s)	439, 894
BsrI	ACTGG	1 cut(s)	463
BssECI	CCNNGG	3 cut(s)	648, 1076, 1216
BssHII	GCGCGC	1 cut(s)	351
BssMI	GATC	4 cut(s)	894, 934, 1363, 1564
BssNAI	GTATAC	1 cut(s)	600
BssNI	GRCGYC	1 cut(s)	75
BssT1I	CCWWGG	1 cut(s)	648
Bst1107I	GTATAC	1 cut(s)	600
Bst2UI	CCWGG	1 cut(s)	1077
Bst4CI	ACNGT	3 cut(s)	1220, 1586, 1676
Bst6I	CTCTTC	1 cut(s)	1551
BstACI	GRCGYC	1 cut(s)	75
BstAPI	GCANNNNNTGC	1 cut(s)	436
BstBAI	YACGTR	1 cut(s)	913
BstC8I	GCNNGC	3 cut(s)	353, 901, 1286
BstDEI	CTNAG	5 cut(s)	558, 813, 1358, 1538, 1708
BstDSI	CCRYGG	2 cut(s)	648, 1216
BstENI	CCTNNNNNAGG	1 cut(s)	119
BstF5I	GGATG	6 cut(s)	168, 535, 591, 670, 969, 1765
BstFNI	CGCG	4 cut(s)	353, 404, 1430, 1554
BstH2I	RGCGCY	1 cut(s)	906
BstHHI	GCGC	5 cut(s)	353, 355, 404, 905, 1662
BstKTI	GATC	4 cut(s)	897, 937, 1366, 1567
BstMAI	GTCTC	2 cut(s)	66, 625
BstMBI	GATC	4 cut(s)	894, 934, 1363, 1564
BstMWI	GCNNNNNNNGC	5 cut(s)	352, 436, 1081, 1244, 1313
BstNI	CCWGG	1 cut(s)	1077
BstNSI	RCATGY	1 cut(s)	1292
BstSCI	CCNGG	1 cut(s)	1075
BstSFI	CTRYAG	3 cut(s)	67, 1164, 1599
BstSLI	GKGCMC	1 cut(s)	918
BstUI	CGCG	4 cut(s)	353, 404, 1430, 1554
BstV1I	GCAGC	5 cut(s)	1096, 1247, 1300, 1303, 1349
BstV2I	GAAGAC	1 cut(s)	461
BstZ17I	GTATAC	1 cut(s)	600
BsuRI	GGCC	3 cut(s)	159, 1116, 1284
BtgI	CCRYGG	2 cut(s)	648, 1216
BtsCI	GGATG	6 cut(s)	168, 535, 591, 670, 969, 1765
BtsIMutI	CAGTG	2 cut(s)	1224, 1591
BtuMI	TCGCGA	1 cut(s)	1554
BveI	ACCTGC	1 cut(s)	1781
Cac8I	GCNNGC	3 cut(s)	353, 901, 1286
CaiI	CAGNNNCTG	1 cut(s)	1241
CciI	TCATGA	1 cut(s)	1053
CfoI	GCGC	5 cut(s)	353, 355, 404, 905, 1662
Cfr13I	GGNCC	3 cut(s)	111, 316, 1268
CseI	GACGC	3 cut(s)	350, 376, 724
Csp6I	GTAC	4 cut(s)	331, 463, 808, 1770
CviAII	CATG	7 cut(s)	143, 649, 743, 1013, 1054, 1289, 1450
CviQI	GTAC	4 cut(s)	331, 463, 808, 1770
DdeI	CTNAG	5 cut(s)	558, 813, 1358, 1538, 1708
DpnI	GATC	4 cut(s)	896, 936, 1365, 1566
DpnII	GATC	4 cut(s)	894, 934, 1363, 1564
DraI	TTTAAA	2 cut(s)	640, 943
EaeI	YGGCCR	1 cut(s)	1114
Eam1104I	CTCTTC	1 cut(s)	1551
EarI	CTCTTC	1 cut(s)	1551
Ecl136II	GAGCTC	2 cut(s)	279, 1278
Eco130I	CCWWGG	1 cut(s)	648
Eco24I	GRGCYC	2 cut(s)	281, 1280
Eco47I	GGWCC	3 cut(s)	111, 316, 1268
Eco53kI	GAGCTC	2 cut(s)	279, 1278
Eco72I	CACGTG	1 cut(s)	913
Eco88I	CYCGRG	1 cut(s)	382
EcoICRI	GAGCTC	2 cut(s)	279, 1278
EcoNI	CCTNNNNNAGG	1 cut(s)	119
EcoO109I	RGGNCCY	2 cut(s)	111, 1268
EcoRII	CCWGG	1 cut(s)	1075
EcoT14I	CCWWGG	1 cut(s)	648
EcoT38I	GRGCYC	2 cut(s)	281, 1280
ErhI	CCWWGG	1 cut(s)	648
Esp3I	CGTCTC	1 cut(s)	66
FaeI	CATG	7 cut(s)	146, 652, 746, 1016, 1057, 1292, 1453
FaqI	GGGAC	2 cut(s)	97, 1451
FatI	CATG	7 cut(s)	142, 648, 742, 1012, 1053, 1288, 1449
FauI	CCCGC	1 cut(s)	239
FblI	GTMKAC	1 cut(s)	599
Fnu4HI	GCNGC	6 cut(s)	1085, 1236, 1314, 1317, 1338, 1431
FokI	GGATG	6 cut(s)	155, 542, 598, 677, 976, 1772
FriOI	GRGCYC	2 cut(s)	281, 1280
Fsp4HI	GCNGC	6 cut(s)	1085, 1236, 1314, 1317, 1338, 1431
FspBI	CTAG	3 cut(s)	1022, 1100, 1595
FspI	TGCGCA	1 cut(s)	1661
GlaI	GCGC	5 cut(s)	352, 354, 403, 904, 1661
GluI	GCNGC	6 cut(s)	1085, 1236, 1314, 1317, 1338, 1431
GsaI	CCCAGC	4 cut(s)	910, 1020, 1399, 1437
HaeII	RGCGCY	1 cut(s)	906
HaeIII	GGCC	3 cut(s)	159, 1116, 1284
HapII	CCGG	1 cut(s)	314
HgaI	GACGC	3 cut(s)	350, 376, 724
HhaI	GCGC	5 cut(s)	353, 355, 404, 905, 1662
Hin1I	GRCGYC	1 cut(s)	75
Hin1II	CATG	7 cut(s)	146, 652, 746, 1016, 1057, 1292, 1453
Hin6I	GCGC	5 cut(s)	351, 353, 402, 903, 1660
HinP1I	GCGC	5 cut(s)	351, 353, 402, 903, 1660
HindIII	AAGCTT	1 cut(s)	52
HinfI	GANTC	7 cut(s)	412, 868, 1178, 1212, 1254, 1417, 1444
HpaII	CCGG	1 cut(s)	314
HphI	GGTGA	3 cut(s)	463, 1232, 1682
Hpy166II	GTNNAC	4 cut(s)	600, 916, 1105, 1770
Hpy188I	TCNGA	2 cut(s)	537, 1569
Hpy188III	TCNNGA	9 cut(s)	255, 365, 557, 614, 932, 1054, 1348, 1553, 1710
Hpy8I	GTNNAC	4 cut(s)	600, 916, 1105, 1770
Hpy99I	CGWCG	3 cut(s)	342, 392, 718
HpyAV	CCTTC	4 cut(s)	233, 532, 824, 1707
HpyCH4III	ACNGT	3 cut(s)	1220, 1586, 1676
HpyCH4IV	ACGT	4 cut(s)	75, 680, 912, 983
HpyF10VI	GCNNNNNNNGC	5 cut(s)	352, 436, 1081, 1244, 1313
HpyF3I	CTNAG	5 cut(s)	558, 813, 1358, 1538, 1708
HpySE526I	ACGT	4 cut(s)	75, 680, 912, 983
Hsp92I	GRCGYC	1 cut(s)	75
Hsp92II	CATG	7 cut(s)	146, 652, 746, 1016, 1057, 1292, 1453
HspAI	GCGC	5 cut(s)	351, 353, 402, 903, 1660
Kzo9I	GATC	4 cut(s)	894, 934, 1363, 1564
LmnI	GCTCC	6 cut(s)	222, 276, 284, 833, 1081, 1190
Lsp1109I	GCAGC	5 cut(s)	1096, 1247, 1300, 1303, 1349
LweI	GCATC	2 cut(s)	520, 1344
MaeI	CTAG	3 cut(s)	1022, 1100, 1595
MaeII	ACGT	4 cut(s)	75, 680, 912, 983
MaeIII	GTNAC	2 cut(s)	1220, 1670
MalI	GATC	4 cut(s)	896, 936, 1365, 1566
MboI	GATC	4 cut(s)	894, 934, 1363, 1564
MboII	GAAGA	6 cut(s)	257, 466, 574, 1363, 1568, 1663
MfeI	CAATTG	1 cut(s)	605
MhlI	GDGCHC	5 cut(s)	281, 918, 999, 1280, 1709
MlyI	GAGTC	2 cut(s)	1263, 1438
MmeI	TCCRAC	1 cut(s)	1458
MseI	TTAA	6 cut(s)	639, 864, 942, 1143, 1199, 1689
MslI	CAYNNNNRTG	1 cut(s)	141
MspI	CCGG	1 cut(s)	314
MspR9I	CCNGG	1 cut(s)	1077
MssI	GTTTAAAC	1 cut(s)	943
MunI	CAATTG	1 cut(s)	605
Mva1269I	GAATGC	2 cut(s)	348, 889
MvaI	CCWGG	1 cut(s)	1077
MvnI	CGCG	4 cut(s)	353, 404, 1430, 1554
MwoI	GCNNNNNNNGC	5 cut(s)	352, 436, 1081, 1244, 1313
NcoI	CCATGG	1 cut(s)	648
NdeII	GATC	4 cut(s)	894, 934, 1363, 1564
NlaIII	CATG	7 cut(s)	146, 652, 746, 1016, 1057, 1292, 1453
NlaIV	GGNNCC	2 cut(s)	113, 1269
NmuCI	GTSAC	2 cut(s)	1220, 1670
NruI	TCGCGA	1 cut(s)	1554
NsbI	TGCGCA	1 cut(s)	1661
NspI	RCATGY	1 cut(s)	1292
PagI	TCATGA	1 cut(s)	1053
PauI	GCGCGC	1 cut(s)	351
PctI	GAATGC	2 cut(s)	348, 889
PfeI	GAWTC	5 cut(s)	412, 868, 1178, 1212, 1417
PflFI	GACNNNGTC	1 cut(s)	1253
PkrI	GCNGC	6 cut(s)	1086, 1237, 1315, 1318, 1339, 1432
PleI	GAGTC	2 cut(s)	1262, 1438
PmaCI	CACGTG	1 cut(s)	913
PmeI	GTTTAAAC	1 cut(s)	943
PmlI	CACGTG	1 cut(s)	913
PpsI	GAGTC	2 cut(s)	1262, 1438
Ppu21I	YACGTR	1 cut(s)	913
PpuMI	RGGWCCY	2 cut(s)	111, 1268
PsiI	TTATAA	1 cut(s)	1616
Psp124BI	GAGCTC	2 cut(s)	281, 1280
Psp5II	RGGWCCY	2 cut(s)	111, 1268
Psp6I	CCWGG	1 cut(s)	1075
PspCI	CACGTG	1 cut(s)	913
PspFI	CCCAGC	4 cut(s)	906, 1016, 1395, 1433
PspGI	CCWGG	1 cut(s)	1075
PspN4I	GGNNCC	2 cut(s)	113, 1269
PspPI	GGNCC	3 cut(s)	111, 316, 1268
PspPPI	RGGWCCY	2 cut(s)	111, 1268
PstNI	CAGNNNCTG	1 cut(s)	1241
PsyI	GACNNNGTC	1 cut(s)	1253
PteI	GCGCGC	1 cut(s)	351
RruI	TCGCGA	1 cut(s)	1554
RsaI	GTAC	4 cut(s)	332, 464, 809, 1771
RsaNI	GTAC	4 cut(s)	331, 463, 808, 1770
RseI	CAYNNNNRTG	1 cut(s)	141
SacI	GAGCTC	2 cut(s)	281, 1280
SaqAI	TTAA	6 cut(s)	639, 864, 942, 1143, 1199, 1689
SatI	GCNGC	6 cut(s)	1085, 1236, 1314, 1317, 1338, 1431
Sau3AI	GATC	4 cut(s)	894, 934, 1363, 1564
Sau96I	GGNCC	3 cut(s)	111, 316, 1268
ScaI	AGTACT	1 cut(s)	332
SchI	GAGTC	2 cut(s)	1263, 1438
ScrFI	CCNGG	1 cut(s)	1077
SduI	GDGCHC	5 cut(s)	281, 918, 999, 1280, 1709
SfaNI	GCATC	2 cut(s)	520, 1344
SfcI	CTRYAG	3 cut(s)	67, 1164, 1599
SinI	GGWCC	3 cut(s)	111, 316, 1268
SmiMI	CAYNNNNRTG	1 cut(s)	141
SmlI	CTYRAG	1 cut(s)	106
SmoI	CTYRAG	1 cut(s)	106
SsiI	CCGC	5 cut(s)	232, 449, 516, 1430, 1776
SspI	AATATT	1 cut(s)	1040
SspMI	CTAG	3 cut(s)	1022, 1100, 1595
SstI	GAGCTC	2 cut(s)	281, 1280
StyD4I	CCNGG	1 cut(s)	1075
StyI	CCWWGG	1 cut(s)	648
TaaI	ACNGT	3 cut(s)	1220, 1586, 1676
TaiI	ACGT	4 cut(s)	78, 683, 915, 986
TaqI	TCGA	8 cut(s)	340, 420, 498, 686, 713, 776, 1210, 1366
TatI	WGTACW	2 cut(s)	330, 807
TauI	GCSGC	1 cut(s)	1433
TfiI	GAWTC	5 cut(s)	412, 868, 1178, 1212, 1417
Tru1I	TTAA	6 cut(s)	639, 864, 942, 1143, 1199, 1689
Tru9I	TTAA	6 cut(s)	639, 864, 942, 1143, 1199, 1689
TscAI	CASTG	2 cut(s)	1231, 1591
TseFI	GTSAC	2 cut(s)	1220, 1670
TseI	GCWGC	5 cut(s)	1084, 1235, 1313, 1316, 1337
Tsp45I	GTSAC	2 cut(s)	1220, 1670
TspDTI	ATGAA	6 cut(s)	215, 967, 980, 1170, 1664, 1736
TspGWI	ACGGA	2 cut(s)	271, 935
TspRI	CASTG	2 cut(s)	1231, 1591
Tth111I	GACNNNGTC	1 cut(s)	1253
VneI	GTGCAC	1 cut(s)	914
VpaK11BI	GGWCC	3 cut(s)	111, 316, 1268
XagI	CCTNNNNNAGG	1 cut(s)	119
XapI	RAATTY	4 cut(s)	237, 552, 658, 973
XceI	RCATGY	1 cut(s)	1292
XmiI	GTMKAC	1 cut(s)	599
XspI	CTAG	3 cut(s)	1022, 1100, 1595
ZraI	GACGTC	1 cut(s)	76
ZrmI	AGTACT	1 cut(s)	332

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.