Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0016074

Physical Location & Seq

Genomic Coordinates Forward (+)

6004616 .. 6006764

Gene Structure 2149 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g06000.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1917 bp

ATGCTTCGTCCAAATCTCCCAAAACCCCCACAAAACCCTCTAAACCAGCAAAGCTTTGAACAAAACTACAGAGACATCTGCAACCTCCTCCTCTCCCTAACCCACTCAAGGTCCCTCCCAAGGGGTCTGCAACTCCATTCCCATGTCCTCAAATCAGGCCTCCAAACCATCCCTCTCATCTCCCACCACCTCATCAACTTCTACTCCAAGAACCAGCTCCCCCTTCATTCCCGCCAAATTTTTGAAGAAGCCTCACGAAAGTCATCAACTACTTGGAGCTCAGTCATCTCCTCATTTGCCCAGAACGAGCTTCCGGTCCTCGCCATTGAGTACTTTCGTCGAATGCTTGGCGCGCAACTGCGCCCCGATGACCATATATACCCGAGCGTCACCAAGTCCTGCGCGATTTTGAATCGGCTCGATGTTGGGCAGTCTGTGCATTGCCTTGCGGTGAAGACTGGGTACGAGTTTGATGTGTTTGTGGGAAGTTCTGTGGTCGATATGTATGCAAAATGCGGAGAGATAAGGGATGCTCGGAAGGTGTTTGATGAAATTCCTGAGAAGAATGTGGTTTCTTGGAGTGGGATGATATATGGGTATACTCAATTGGGTCAAGATGAGGAGGCTTTGAGACTATTTAAACAAGCCATGGTTGAAAATTTGGATGTCAATGACTTTACGTTTTCGAGTGTTATACGGGTTTGTGGCAATTCGACGCTTTTTGAATTGGGGAGGCAAATACATGGGTTGTGCTTCAAAACGAACTTTGATTTGTCGAGCTTTGTTGGTAGTTCTTTGGTTTCTCTGTACTCTAAGTGTGGTGTGATTGAAGGAGCTTATCGTGTTTTTGATGAGATACCCATTAAGAATCTTGGAATGTGGAATGCAATGCTGATAGCAAGCGCCCAGCACGTTGCAGGGATGAAGCCGAATTTCATTACGTTTTTGTGTGTGCTCTATGCTTGTAGCCATGCTGGGTTAGTTGAAAAGGGGCAATATTACTTTGGGCTCATGAAAGAGTATGGGATTGAGCCAGGGGAGCAGCATTATGCTACCCTAGTGGACCTGCTTGGCCGTGCTGGAAAATTGCAGGAAGCAGTTAAAATTATTGATGAAATGCCTATAGAACCAACAGAATCTATATGGGGAGCTTTATTAACGGGTTGTCGAATCCACGGTGACACTGAATTGGCAGCCTTTGTGGCTGACAGAGTCTTTGGGTTAGGTCCTGTGAGCTCTGGCCTGCATGTGCTTTTGTCTAATGCTTATGCTGCTGCCGGAAGATTTGAGGAAGCAGCAAAAGTCAGGAAGATGCTAAGAGATCGAGGGGTGAAAAAGGAAACGGGTTTGAGCTGGGTTGAGGAGGGAAACAAGATTCACACATTTGCGGCCGGGGACAGGACTCACATGAGAACTAAAGAGATTTATGAGAAGTTGGAGGAGTTAGGGGAGGAAATGGAGAAAGCTGGTTATGTTGCAGACACAAGTTTCGTGCTAAGAGAGGTAAATCGCGAAGAGAAAGATCAGACAATTAGGTATCACAGCGAAAGACTAGCTGTAGCATTTGGTCTTATAACCTTTCCGCCCGATAGACCAATTAGGATTATGAAGAACTTGCGCATTTGTGGTGATTGTCATACTGCAATTAAGTTTATGTCCAAGTGCTCAGGAAGGGTTATCATAGTGAGGGATAACAATAGGTTTCATAGGTTCGAGGATGGAAAGTGTACCTATGATCTGAATGGTCTAAAACTCCCGTTCAAGATGCTGCTGCCGGTTAATACCAAAGCGCATTATAAGCCATTTCTGCTTGAACCATTTTATTTTTCCCCTTCCGGTGTTTCATGCTCGTACCAAGCTATTGAATTAGATTACCATTTTGTTCGTGAGCGGGTTAAACTTGGGGCGCACAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016553 GO:0016554 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

639

Amino Acids

72.11

Weight (kDa)

8.23

Isoelectric Point (pI)

41.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016074)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52630
fragaria_vesca	FvH4_5g33500 FvH4_5g33500 FvH4_5g33620
malus_domestica	MD12G1068000.v1.1 MD14G1068100.v1.1
prunus_persica	Prupe.7G066200_v2.0.a1
pyrus_communis	pycom12g06000
rosa_chinensis	RchiOBHm_Chr7g0232261
rosa_laevigata	RLG00000001359
rosa_multiflora	Rmu_sc0004136.1_g000002
rosa_roxburghii	Rroxscaffold_3G00228480
rosa_samantha	Rh7AG426400 Rh7BG400100
rosa_wichuraiana	Rw7G035330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1574, 1797
Acc16I	TGCGCA	1 cut(s)	1619
Acc36I	ACCTGC	1 cut(s)	1074
AccBSI	CCGCTC	1 cut(s)	1891
AccI	GTMKAC	1 cut(s)	599
AccII	CGCG	3 cut(s)	353, 404, 1512
AciI	CCGC	6 cut(s)	232, 449, 516, 1388, 1583, 1891
AcoI	YGGCCR	2 cut(s)	1072, 1389
AcsI	RAATTY	4 cut(s)	237, 552, 658, 931
AfaI	GTAC	5 cut(s)	332, 464, 809, 1729, 1853
AfiI	CCNNNNNNNGG	4 cut(s)	108, 120, 121, 1398
AjnI	CCWGG	1 cut(s)	1033
Alw21I	GWGCWC	4 cut(s)	281, 957, 1238, 1667
Alw26I	GTCTC	2 cut(s)	66, 625
Ama87I	CYCGRG	1 cut(s)	382
AoxI	GGCC	4 cut(s)	157, 1072, 1240, 1389
ApeKI	GCWGC	7 cut(s)	1042, 1193, 1271, 1274, 1295, 1768, 1771
ApoI	RAATTY	4 cut(s)	237, 552, 658, 931
ArsI	GACNNNNNNTTYG	4 cut(s)	1199, 1231, 1472, 1504
AspLEI	GCGC	8 cut(s)	353, 355, 363, 404, 905, 1620, 1792, 1909
AspS9I	GGNCC	4 cut(s)	111, 316, 1063, 1226
AsuC2I	CCSGG	1 cut(s)	1393
AsuHPI	GGTGA	5 cut(s)	382, 463, 1190, 1342, 1640
AvaI	CYCGRG	1 cut(s)	382
AvaII	GGWCC	4 cut(s)	111, 316, 1063, 1226
BanII	GRGCYC	3 cut(s)	281, 1011, 1238
BarI	GAAGNNNNNNTAC	2 cut(s)	446, 478
BbsI	GAAGAC	1 cut(s)	461
Bbv12I	GWGCWC	4 cut(s)	281, 957, 1238, 1667
BbvI	GCAGC	7 cut(s)	1054, 1205, 1258, 1261, 1307, 1755, 1758
BccI	CCATC	2 cut(s)	176, 1712
BceAI	ACGGC	1 cut(s)	1059
BcgI	CGANNNNNNTGC	2 cut(s)	488, 522
BciT130I	CCWGG	1 cut(s)	1035
BcnI	CCSGG	1 cut(s)	1393
BcoDI	GTCTC	2 cut(s)	66, 625
BfaI	CTAG	2 cut(s)	1058, 1553
BfmI	CTRYAG	3 cut(s)	67, 1122, 1557
BfoI	RGCGCY	1 cut(s)	906
BfuAI	ACCTGC	1 cut(s)	1074
BglI	GCCNNNNNGGC	1 cut(s)	1202
BisI	GCNGC	8 cut(s)	1043, 1194, 1272, 1275, 1296, 1389, 1769, 1772
BlsI	GCNGC	8 cut(s)	1044, 1195, 1273, 1276, 1297, 1390, 1770, 1773
BmcAI	AGTACT	1 cut(s)	332
Bme1390I	CCNGG	2 cut(s)	1035, 1393
Bme18I	GGWCC	4 cut(s)	111, 316, 1063, 1226
BmeT110I	CYCGRG	1 cut(s)	382
BmgT120I	GGNCC	4 cut(s)	111, 316, 1063, 1226
BmiI	GGNNCC	1 cut(s)	113
BmrFI	CCNGG	2 cut(s)	1035, 1393
BmrI	ACTGGG	1 cut(s)	468
BmsI	GCATC	3 cut(s)	520, 1302, 1755
BmuI	ACTGGG	1 cut(s)	468
BpiI	GAAGAC	1 cut(s)	461
Bpu10I	CCTNAGC	1 cut(s)	1666
BpuEI	CTTGAG	1 cut(s)	91
BpuMI	CCSGG	1 cut(s)	1393
BsaJI	CCNNGG	5 cut(s)	119, 648, 1034, 1174, 1392
BsaWI	WCCGGW	2 cut(s)	313, 1835
BsaXI	ACNNNNNCTCC	2 cut(s)	188, 218
Bsc4I	CCNNNNNNNGG	4 cut(s)	108, 120, 121, 1398
Bse118I	RCCGGY	1 cut(s)	1774
Bse1I	ACTGG	1 cut(s)	463
Bse3DI	GCAATG	2 cut(s)	439, 894
BseBI	CCWGG	1 cut(s)	1035
BseDI	CCNNGG	5 cut(s)	119, 648, 1034, 1174, 1392
BseGI	GGATG	6 cut(s)	168, 535, 591, 670, 927, 1723
BseLI	CCNNNNNNNGG	4 cut(s)	108, 120, 121, 1398
BseMI	GCAATG	2 cut(s)	439, 894
BseMII	CTCAG	3 cut(s)	294, 549, 1680
BseNI	ACTGG	1 cut(s)	463
BsePI	GCGCGC	1 cut(s)	351
BseRI	GAGGAG	6 cut(s)	77, 80, 280, 635, 1376, 1454
BseX3I	CGGCCG	1 cut(s)	1389
BseXI	GCAGC	7 cut(s)	1054, 1205, 1258, 1261, 1307, 1755, 1758
BseYI	CCCAGC	3 cut(s)	906, 974, 1353
Bsh1236I	CGCG	3 cut(s)	353, 404, 1512
Bsh1285I	CGRYCG	1 cut(s)	1392
BshFI	GGCC	4 cut(s)	159, 1074, 1242, 1391
BsiEI	CGRYCG	1 cut(s)	1392
BsiHKAI	GWGCWC	4 cut(s)	281, 957, 1238, 1667
BsiHKCI	CYCGRG	1 cut(s)	382
BsiSI	CCGG	5 cut(s)	314, 1278, 1392, 1775, 1836
BslFI	GGGAC	2 cut(s)	97, 1409
BslI	CCNNNNNNNGG	4 cut(s)	108, 120, 121, 1398
BsmAI	GTCTC	2 cut(s)	66, 625
BsmFI	GGGAC	2 cut(s)	97, 1409
BsmI	GAATGC	2 cut(s)	348, 889
BsnI	GGCC	4 cut(s)	159, 1074, 1242, 1391
BsoBI	CYCGRG	1 cut(s)	382
Bsp1286I	GDGCHC	5 cut(s)	281, 957, 1011, 1238, 1667
Bsp143I	GATC	3 cut(s)	1321, 1522, 1735
Bsp19I	CCATGG	1 cut(s)	648
Bsp68I	TCGCGA	1 cut(s)	1512
BspACI	CCGC	6 cut(s)	232, 449, 516, 1388, 1583, 1891
BspANI	GGCC	4 cut(s)	159, 1074, 1242, 1391
BspCNI	CTCAG	3 cut(s)	293, 550, 1679
BspFNI	CGCG	3 cut(s)	353, 404, 1512
BspHI	TCATGA	1 cut(s)	1011
BspLI	GGNNCC	1 cut(s)	113
BspMI	ACCTGC	1 cut(s)	1074
BsrBI	CCGCTC	1 cut(s)	1891
BsrDI	GCAATG	2 cut(s)	439, 894
BsrFI	RCCGGY	1 cut(s)	1774
BsrI	ACTGG	1 cut(s)	463
BssAI	RCCGGY	1 cut(s)	1774
BssECI	CCNNGG	5 cut(s)	119, 648, 1034, 1174, 1392
BssHII	GCGCGC	1 cut(s)	351
BssMI	GATC	3 cut(s)	1321, 1522, 1735
BssNAI	GTATAC	1 cut(s)	600
BssT1I	CCWWGG	2 cut(s)	119, 648
Bst1107I	GTATAC	1 cut(s)	600
Bst2UI	CCWGG	1 cut(s)	1035
Bst4CI	ACNGT	1 cut(s)	1178
Bst6I	CTCTTC	1 cut(s)	1509
BstAPI	GCANNNNNTGC	1 cut(s)	436
BstC8I	GCNNGC	3 cut(s)	353, 901, 1244
BstDEI	CTNAG	6 cut(s)	280, 558, 813, 1316, 1496, 1666
BstDSI	CCRYGG	2 cut(s)	648, 1174
BstF5I	GGATG	6 cut(s)	168, 535, 591, 670, 927, 1723
BstFNI	CGCG	3 cut(s)	353, 404, 1512
BstH2I	RGCGCY	1 cut(s)	906
BstHHI	GCGC	8 cut(s)	353, 355, 363, 404, 905, 1620, 1792, 1909
BstKTI	GATC	3 cut(s)	1324, 1525, 1738
BstMAI	GTCTC	2 cut(s)	66, 625
BstMBI	GATC	3 cut(s)	1321, 1522, 1735
BstMCI	CGRYCG	1 cut(s)	1392
BstMWI	GCNNNNNNNGC	7 cut(s)	352, 436, 1039, 1202, 1271, 1798, 1807
BstNI	CCWGG	1 cut(s)	1035
BstNSI	RCATGY	1 cut(s)	1250
BstSCI	CCNGG	2 cut(s)	1033, 1391
BstSFI	CTRYAG	3 cut(s)	67, 1122, 1557
BstUI	CGCG	3 cut(s)	353, 404, 1512
BstV1I	GCAGC	7 cut(s)	1054, 1205, 1258, 1261, 1307, 1755, 1758
BstV2I	GAAGAC	1 cut(s)	461
BstZ17I	GTATAC	1 cut(s)	600
BstZI	CGGCCG	1 cut(s)	1389
BsuRI	GGCC	4 cut(s)	159, 1074, 1242, 1391
BtgI	CCRYGG	2 cut(s)	648, 1174
BtsCI	GGATG	6 cut(s)	168, 535, 591, 670, 927, 1723
BtsIMutI	CAGTG	1 cut(s)	1182
BtuMI	TCGCGA	1 cut(s)	1512
BveI	ACCTGC	1 cut(s)	1074
Cac8I	GCNNGC	3 cut(s)	353, 901, 1244
CciI	TCATGA	1 cut(s)	1011
CfoI	GCGC	8 cut(s)	353, 355, 363, 404, 905, 1620, 1792, 1909
Cfr10I	RCCGGY	1 cut(s)	1774
Cfr13I	GGNCC	4 cut(s)	111, 316, 1063, 1226
CseI	GACGC	2 cut(s)	376, 724
Csp6I	GTAC	5 cut(s)	331, 463, 808, 1728, 1852
CviAII	CATG	8 cut(s)	143, 649, 743, 971, 1012, 1247, 1408, 1845
CviQI	GTAC	5 cut(s)	331, 463, 808, 1728, 1852
DdeI	CTNAG	6 cut(s)	280, 558, 813, 1316, 1496, 1666
DpnI	GATC	3 cut(s)	1323, 1524, 1737
DpnII	GATC	3 cut(s)	1321, 1522, 1735
DraI	TTTAAA	1 cut(s)	640
EaeI	YGGCCR	2 cut(s)	1072, 1389
EagI	CGGCCG	1 cut(s)	1389
Eam1104I	CTCTTC	1 cut(s)	1509
EarI	CTCTTC	1 cut(s)	1509
EciI	GGCGGA	1 cut(s)	1572
Ecl136II	GAGCTC	2 cut(s)	279, 1236
EclXI	CGGCCG	1 cut(s)	1389
Eco130I	CCWWGG	2 cut(s)	119, 648
Eco147I	AGGCCT	1 cut(s)	159
Eco24I	GRGCYC	3 cut(s)	281, 1011, 1238
Eco47I	GGWCC	4 cut(s)	111, 316, 1063, 1226
Eco52I	CGGCCG	1 cut(s)	1389
Eco53kI	GAGCTC	2 cut(s)	279, 1236
Eco88I	CYCGRG	1 cut(s)	382
EcoICRI	GAGCTC	2 cut(s)	279, 1236
EcoO109I	RGGNCCY	2 cut(s)	111, 1226
EcoRII	CCWGG	1 cut(s)	1033
EcoT14I	CCWWGG	2 cut(s)	119, 648
EcoT38I	GRGCYC	3 cut(s)	281, 1011, 1238
ErhI	CCWWGG	2 cut(s)	119, 648
FaeI	CATG	8 cut(s)	146, 652, 746, 974, 1015, 1250, 1411, 1848
FaqI	GGGAC	2 cut(s)	97, 1409
FatI	CATG	8 cut(s)	142, 648, 742, 970, 1011, 1246, 1407, 1844
FauI	CCCGC	2 cut(s)	239, 1884
FblI	GTMKAC	1 cut(s)	599
Fnu4HI	GCNGC	8 cut(s)	1043, 1194, 1272, 1275, 1296, 1389, 1769, 1772
FokI	GGATG	6 cut(s)	155, 542, 598, 677, 934, 1730
FriOI	GRGCYC	3 cut(s)	281, 1011, 1238
Fsp4HI	GCNGC	8 cut(s)	1043, 1194, 1272, 1275, 1296, 1389, 1769, 1772
FspBI	CTAG	2 cut(s)	1058, 1553
FspI	TGCGCA	1 cut(s)	1619
GlaI	GCGC	8 cut(s)	352, 354, 362, 403, 904, 1619, 1791, 1908
GluI	GCNGC	8 cut(s)	1043, 1194, 1272, 1275, 1296, 1389, 1769, 1772
GsaI	CCCAGC	3 cut(s)	910, 978, 1357
HaeII	RGCGCY	1 cut(s)	906
HaeIII	GGCC	4 cut(s)	159, 1074, 1242, 1391
HapII	CCGG	5 cut(s)	314, 1278, 1392, 1775, 1836
HgaI	GACGC	2 cut(s)	376, 724
HhaI	GCGC	8 cut(s)	353, 355, 363, 404, 905, 1620, 1792, 1909
Hin1II	CATG	8 cut(s)	146, 652, 746, 974, 1015, 1250, 1411, 1848
Hin6I	GCGC	8 cut(s)	351, 353, 361, 402, 903, 1618, 1790, 1907
HinP1I	GCGC	8 cut(s)	351, 353, 361, 402, 903, 1618, 1790, 1907
HindIII	AAGCTT	1 cut(s)	52
HinfI	GANTC	7 cut(s)	412, 868, 1136, 1170, 1212, 1375, 1402
HpaII	CCGG	5 cut(s)	314, 1278, 1392, 1775, 1836
HphI	GGTGA	5 cut(s)	382, 463, 1190, 1342, 1640
Hpy166II	GTNNAC	3 cut(s)	600, 1063, 1728
Hpy188I	TCNGA	3 cut(s)	537, 1527, 1740
Hpy188III	TCNNGA	9 cut(s)	255, 557, 614, 1012, 1306, 1511, 1668, 1762, 1886
Hpy8I	GTNNAC	3 cut(s)	600, 1063, 1728
Hpy99I	CGWCG	2 cut(s)	342, 718
HpyAV	CCTTC	5 cut(s)	233, 532, 824, 1665, 1842
HpyCH4III	ACNGT	1 cut(s)	1178
HpyCH4IV	ACGT	3 cut(s)	680, 912, 941
HpyF10VI	GCNNNNNNNGC	7 cut(s)	352, 436, 1039, 1202, 1271, 1798, 1807
HpyF3I	CTNAG	6 cut(s)	280, 558, 813, 1316, 1496, 1666
HpySE526I	ACGT	3 cut(s)	680, 912, 941
Hsp92II	CATG	8 cut(s)	146, 652, 746, 974, 1015, 1250, 1411, 1848
HspAI	GCGC	8 cut(s)	351, 353, 361, 402, 903, 1618, 1790, 1907
Kzo9I	GATC	3 cut(s)	1321, 1522, 1735
LmnI	GCTCC	5 cut(s)	222, 276, 833, 1039, 1148
Lsp1109I	GCAGC	7 cut(s)	1054, 1205, 1258, 1261, 1307, 1755, 1758
LweI	GCATC	3 cut(s)	520, 1302, 1755
MaeI	CTAG	2 cut(s)	1058, 1553
MaeII	ACGT	3 cut(s)	680, 912, 941
MaeIII	GTNAC	2 cut(s)	388, 1178
MalI	GATC	3 cut(s)	1323, 1524, 1737
MbiI	CCGCTC	1 cut(s)	1891
MboI	GATC	3 cut(s)	1321, 1522, 1735
MboII	GAAGA	7 cut(s)	257, 466, 574, 1293, 1321, 1526, 1621
MfeI	CAATTG	1 cut(s)	605
MhlI	GDGCHC	5 cut(s)	281, 957, 1011, 1238, 1667
MlyI	GAGTC	2 cut(s)	1221, 1396
MmeI	TCCRAC	1 cut(s)	1416
MseI	TTAA	7 cut(s)	639, 864, 1101, 1157, 1647, 1779, 1896
MslI	CAYNNNNRTG	1 cut(s)	141
MspI	CCGG	5 cut(s)	314, 1278, 1392, 1775, 1836
MspR9I	CCNGG	2 cut(s)	1035, 1393
MunI	CAATTG	1 cut(s)	605
Mva1269I	GAATGC	2 cut(s)	348, 889
MvaI	CCWGG	1 cut(s)	1035
MvnI	CGCG	3 cut(s)	353, 404, 1512
MwoI	GCNNNNNNNGC	7 cut(s)	352, 436, 1039, 1202, 1271, 1798, 1807
NciI	CCSGG	1 cut(s)	1393
NcoI	CCATGG	1 cut(s)	648
NdeII	GATC	3 cut(s)	1321, 1522, 1735
NlaIII	CATG	8 cut(s)	146, 652, 746, 974, 1015, 1250, 1411, 1848
NlaIV	GGNNCC	1 cut(s)	113
NmuCI	GTSAC	2 cut(s)	388, 1178
NruI	TCGCGA	1 cut(s)	1512
NsbI	TGCGCA	1 cut(s)	1619
NspI	RCATGY	1 cut(s)	1250
PagI	TCATGA	1 cut(s)	1011
PauI	GCGCGC	1 cut(s)	351
PceI	AGGCCT	1 cut(s)	159
PctI	GAATGC	2 cut(s)	348, 889
PfeI	GAWTC	5 cut(s)	412, 868, 1136, 1170, 1375
PflFI	GACNNNGTC	1 cut(s)	1211
PkrI	GCNGC	8 cut(s)	1044, 1195, 1273, 1276, 1297, 1390, 1770, 1773
PleI	GAGTC	2 cut(s)	1220, 1396
PpsI	GAGTC	2 cut(s)	1220, 1396
PpuMI	RGGWCCY	2 cut(s)	111, 1226
PsiI	TTATAA	2 cut(s)	1574, 1797
Psp124BI	GAGCTC	2 cut(s)	281, 1238
Psp5II	RGGWCCY	2 cut(s)	111, 1226
Psp6I	CCWGG	1 cut(s)	1033
PspFI	CCCAGC	3 cut(s)	906, 974, 1353
PspGI	CCWGG	1 cut(s)	1033
PspN4I	GGNNCC	1 cut(s)	113
PspPI	GGNCC	4 cut(s)	111, 316, 1063, 1226
PspPPI	RGGWCCY	2 cut(s)	111, 1226
PsyI	GACNNNGTC	1 cut(s)	1211
PteI	GCGCGC	1 cut(s)	351
RruI	TCGCGA	1 cut(s)	1512
RsaI	GTAC	5 cut(s)	332, 464, 809, 1729, 1853
RsaNI	GTAC	5 cut(s)	331, 463, 808, 1728, 1852
RseI	CAYNNNNRTG	1 cut(s)	141
SacI	GAGCTC	2 cut(s)	281, 1238
SaqAI	TTAA	7 cut(s)	639, 864, 1101, 1157, 1647, 1779, 1896
SatI	GCNGC	8 cut(s)	1043, 1194, 1272, 1275, 1296, 1389, 1769, 1772
Sau3AI	GATC	3 cut(s)	1321, 1522, 1735
Sau96I	GGNCC	4 cut(s)	111, 316, 1063, 1226
ScaI	AGTACT	1 cut(s)	332
SchI	GAGTC	2 cut(s)	1221, 1396
ScrFI	CCNGG	2 cut(s)	1035, 1393
SduI	GDGCHC	5 cut(s)	281, 957, 1011, 1238, 1667
SfaNI	GCATC	3 cut(s)	520, 1302, 1755
SfcI	CTRYAG	3 cut(s)	67, 1122, 1557
SinI	GGWCC	4 cut(s)	111, 316, 1063, 1226
SmiMI	CAYNNNNRTG	1 cut(s)	141
SmlI	CTYRAG	1 cut(s)	106
SmoI	CTYRAG	1 cut(s)	106
SseBI	AGGCCT	1 cut(s)	159
SsiI	CCGC	6 cut(s)	232, 449, 516, 1388, 1583, 1891
SspI	AATATT	1 cut(s)	998
SspMI	CTAG	2 cut(s)	1058, 1553
SstI	GAGCTC	2 cut(s)	281, 1238
StuI	AGGCCT	1 cut(s)	159
StyD4I	CCNGG	2 cut(s)	1033, 1391
StyI	CCWWGG	2 cut(s)	119, 648
TaaI	ACNGT	1 cut(s)	1178
TaiI	ACGT	3 cut(s)	683, 915, 944
TaqI	TCGA	9 cut(s)	340, 420, 498, 686, 713, 776, 1168, 1324, 1713
TatI	WGTACW	2 cut(s)	330, 807
TauI	GCSGC	1 cut(s)	1391
TfiI	GAWTC	5 cut(s)	412, 868, 1136, 1170, 1375
Tru1I	TTAA	7 cut(s)	639, 864, 1101, 1157, 1647, 1779, 1896
Tru9I	TTAA	7 cut(s)	639, 864, 1101, 1157, 1647, 1779, 1896
TscAI	CASTG	1 cut(s)	1189
TseFI	GTSAC	2 cut(s)	388, 1178
TseI	GCWGC	7 cut(s)	1042, 1193, 1271, 1274, 1295, 1768, 1771
Tsp45I	GTSAC	2 cut(s)	388, 1178
TspDTI	ATGAA	9 cut(s)	215, 564, 925, 938, 1028, 1128, 1622, 1694, 1833
TspRI	CASTG	1 cut(s)	1189
Tth111I	GACNNNGTC	1 cut(s)	1211
VpaK11BI	GGWCC	4 cut(s)	111, 316, 1063, 1226
XapI	RAATTY	4 cut(s)	237, 552, 658, 931
XceI	RCATGY	1 cut(s)	1250
XmiI	GTMKAC	1 cut(s)	599
XspI	CTAG	2 cut(s)	1058, 1553
ZrmI	AGTACT	1 cut(s)	332

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.